Pregenerated sensors for CTDSPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047409Ensembl transcript IDs: ENSMUST00000073109.12, ENSMUST00000172464.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCATGGTGACATTCACCCTGTGGCCCGGAGCACGGAGTCTTCCTaGGCTGCACTCAGTGAGCCGAGGCCGGGCGGGTCCCCTGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: RHGDIHPVARSTESS*AALSEPRPGGSPEP Trigger: TGGCTCAGGGGACCCGCCCGGCCTCGGCTCACTGAGTGCAGCCCAGGAAGACTCCGTGCTCCGGGCCACAGGGTGAATGTCACCATGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 90 bp | CCAGGGAACCGCGAGCACGGTAGGCCATCCGCTCTTCTCAAACCCTaGCATGCCAGCTGTCCAGCACAGCACCGTGAGGAGCAGAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: PGNREHGRPSALLKP*HASCPAQHREEQRH Trigger: GTGCCTCTGCTCCTCACGGTGCTGTGCTGGACAGCTGGCATGCCAGGGTTTGAGAAGAGCGGATGGCCTACCGTGCTCGCGGTTCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 90 bp | CGGGTGGGAAGAGACCCCCAGGCTCCAGGGAGAAGCCCTTCTCCCTaGTTTGGAGAGATGAGTCTCCCATCAAGGCAGGCTTCTCCAACC | + |
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Preference number: 1 (lower is better) Translates to: RVGRDPQAPGRSPSP*FGEMSLPSRQASPT Trigger: GGTTGGAGAAGCCTGCCTTGATGGGAGACTCATCTCTCCAAACCAGGGAGAAGGGCTTCTCCCTGGAGCCTGGGGGTCTCTTCCCACCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 90 bp | CCCTCAGAAGCTCTGCCACCCACCCAAGACATTCCATGTTTGTGGTaGCAAGAACGGGGCTCCCACCTGGAAGCTCTGCCCGGAGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: PSEALPPTQDIPCLW*QERGSHLEALPGGH Trigger: ATGCCCTCCGGGCAGAGCTTCCAGGTGGGAGCCCCGTTCTTGCCACCACAAACATGGAATGTCTTGGGTGGGTGGCAGAGCTTCTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR TCA 90 bp | AAGAGGCTGAGAGGTGACTTGAGCCACACCAGCATGGCGGCTGGTTaGGGCCACAGGTTCTCAGGTGAGACAGGCGAGTTCCAGCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: KRLRGDLSHTSMAAG*GHRFSGETGEFQLR Trigger: CCTAAGCTGGAACTCGCCTGTCTCACCTGAGAACCTGTGGCCTCAACCAGCCGCCATGCTGGTGTGGCTCAAGTCACCTCTCAGCCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR TCA 90 bp | CAACCCTTGGCTCGAAGAGGCTGTGCTTCCAAAGAGGCTGAGAGGTaGCTTGAGCCACACCAGCATGGCGGCTGGTTGAGGCCACAGGTT | + |
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Preference number: 1 (lower is better) Translates to: QPLARRGCASKEAER*LEPHQHGGWLRPQV Trigger: AACCTGTGGCCTCAACCAGCCGCCATGCTGGTGTGGCTCAAGTCACCTCTCAGCCTCTTTGGAAGCACAGCCTCTTCGAGCCAAGGGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 90 bp | CTTCTAAGCATAGGCACAGTGGCTAAGGAACAGTGTGACAGCCGCTaGTCAGTTCCATTTGGTGTCAGGAGCGCAGTAGCAGCGGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: LLSIGTVAKEQCDSR*SVPFGVRSAVAAES Trigger: GGACTCCGCTGCTACTGCGCTCCTGACACCAAATGGAACTGACCAGCGGCTGTCACACTGTTCCTTAGCCACTGTGCCTATGCTTAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 90 bp | GTTTGGAGAGATGAGTCTCCCATCAAGGCAGGCTTCTCCAACCCTTaGCTCGAAGAGGCTGTGCTTCCAAAGAGGCTGAGAGGTGACTTG | + |
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Preference number: 1 (lower is better) Translates to: VWRDESPIKAGFSNP*LEEAVLPKRLRGDL Trigger: CAAGTCACCTCTCAGCCTCTTTGGAAGCACAGCCTCTTCGAGCCAAGGGTTGGAGAAGCCTGCCTTGATGGGAGACTCATCTCTCCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR TCA 90 bp | GTAGCAGCGGAGTCCGAACAGCGAGCTCCATGTGCACCCAGCTTCTaGAAGGAAGGACTTAATAGATCCAAGGGCTTCAGGGCTTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: VAAESEQRAPCAPSF*KEGLNRSKGFRAFS Trigger: AGAGAAAGCCCTGAAGCCCTTGGATCTATTAAGTCCTTCCTTTCAGAAGCTGGGTGCACATGGAGCTCGCTGTTCGGACTCCGCTGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 90 bp | GGTCAGCTGCTCCAAACCGGGACCAAGAGGACAGGTTTGTCTGCTTaGAAGGGGAGGTCAGTTGAAAGGAAGTCGGGAGATATCAAAGTT | + |
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Preference number: 1 (lower is better) Translates to: GQLLQTGTKRTGLSA*KGRSVERKSGDIKV Trigger: AACTTTGATATCTCCCGACTTCCTTTCAACTGACCTCCCCTTCCAAGCAGACAAACCTGTCCTCTTGGTCCCGGTTTGGAGCAGCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 90 bp | CCTGACTTTAAATCTTGTCAACGCCAGCAACTCCCAGCAGAATTCTaGCTGAGGCCCAACCCACAGAGGACTAAGGCATTGGTGCCAACA | + |
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Preference number: 1 (lower is better) Translates to: PDFKSCQRQQLPAEF*LRPNPQRTKALVPT Trigger: TGTTGGCACCAATGCCTTAGTCCTCTGTGGGTTGGGCCTCAGCCAGAATTCTGCTGGGAGTTGCTGGCGTTGACAAGATTTAAAGTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR TCA 90 bp | ACTTTAAATCTTGTCAACGCCAGCAACTCCCAGCAGAATTCTGGCTaGGGCCCAACCCACAGAGGACTAAGGCATTGGTGCCAACACAAA | + |
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Preference number: 1 (lower is better) Translates to: TLNLVNASNSQQNSG*GPTHRGLRHWCQHK Trigger: TTTGTGTTGGCACCAATGCCTTAGTCCTCTGTGGGTTGGGCCTCAGCCAGAATTCTGCTGGGAGTTGCTGGCGTTGACAAGATTTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 90 bp | AACATTCAAAAAGGCACTTCATCCTGTAGGAAAGAGATTCTGAGTTaGGTCAGCTGCTCCAAACCGGGACCAAGAGGACAGGTTTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: NIQKGTSSCRKEILS*VSCSKPGPRGQVCL Trigger: CAGACAAACCTGTCCTCTTGGTCCCGGTTTGGAGCAGCTGACCCAACTCAGAATCTCTTTCCTACAGGATGAAGTGCCTTTTTGAATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR TCA 90 bp | AAAATAACATTCAAAAAGGCACTTCATCCTGTAGGAAAGAGATTCTaGGTTGGGTCAGCTGCTCCAAACCGGGACCAAGAGGACAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: KITFKKALHPVGKRF*VGSAAPNRDQEDRF Trigger: AAACCTGTCCTCTTGGTCCCGGTTTGGAGCAGCTGACCCAACTCAGAATCTCTTTCCTACAGGATGAAGTGCCTTTTTGAATGTTATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 90 bp | AGATGGAGTGTTTTGGTAACGTGGGAAGGATATGGCACAGAGAAATaGCTGATACGTTCTCAAGCCCGCATTTTAATAAACTTACAATTA | + |
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Preference number: 1 (lower is better) Translates to: RWSVLVTWEGYGTEK*LIRSQARILINLQL Trigger: TAATTGTAAGTTTATTAAAATGCGGGCTTGAGAACGTATCAGCCATTTCTCTGTGCCATATCCTTCCCACGTTACCAAAACACTCCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR CCA 90 bp | CCCGGAGGGCATGGGCACACGCAGCCCCGGGGCTGTAAGGCCAAGGGTTGGCCTCTCCCAGCAGAATTCTaGCTGAGGCCCAACCCACAG | + |
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Preference number: 2 (lower is better) Translates to: PGGHGHTQPRGCKAKGWPLPAEF*LRPNPQ Trigger: CTGTGGGTTGGGCCTCAGCCAGAATTCTGCTGGGAG...AGGCCAACCCTTGGCCTTACAGCCCCGGGGCTGCGTGTGCCCATGCCCTCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR CCA 90 bp | CCCGGAGGGCATGGGCACACGCAGCCCCGGGGCTGTAAGGCCAAGGGTTGGCCTCAGTGTGACAGCCGCTaGTCAGTTCCATTTGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: PGGHGHTQPRGCKAKGWPQCDSR*SVPFGV Trigger: GACACCAAATGGAACTGACCAGCGGCTGTCACACTG...AGGCCAACCCTTGGCCTTACAGCCCCGGGGCTGCGTGTGCCCATGCCCTCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCATGGGCACACGCAGCCCCGGGGCTGTAAGGCCAAGGGTTGGCCTCGAAGAGGACAGGTTTGTCTaGTTGGAAGGGGAGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: EGMGTRSPGAVRPRVGLEEDRFV*LEGEVS Trigger: ACTGACCTCCCCTTCCAAGCAGACAAACCTGTCCTC...TTCGAGGCCAACCCTTGGCCTTACAGCCCCGGGGCTGCGTGTGCCCATGCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCATGGGCACACGCAGCCCCGGGGCTGTAAGGCCAAGGGTTGGCCTCGAAAGAAGCCCTTCTCCCTaGTTTGGAGAGATGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: EGMGTRSPGAVRPRVGLERSPSP*FGEMSL Trigger: GAGACTCATCTCTCCAAACCAGGGAGAAGGGCTTCT...TTCGAGGCCAACCCTTGGCCTTACAGCCCCGGGGCTGCGTGTGCCCATGCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CAA 90 bp | GAGAAAAGTCATGTCAGGGGGAGCGAGATCCCATGCACGCCACGGTaGACAGTCACTCATGTTGGGAGGCGGGCTCCTGTGACCCGTTGC | + |
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Preference number: 2 (lower is better) Translates to: EKSHVRGSEIPCTPR*TVTHVGRRAPVTRC Trigger: GCAACGGGTCACAGGAGCCCGCCTCCCAACATGAGTGACTGTCAACCGTGGCGTGCATGGGATCTCGCTCCCCCTGACATGACTTTTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CAA 90 bp | TCAGAGCCCTCAGAAGCTCTGCCACCCACCCAAGACATTCCATGTTaGTGGTGGCAAGAACGGGGCTCCCACCTGGAAGCTCTGCCCGGA | + |
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Preference number: 2 (lower is better) Translates to: SEPSEALPPTQDIPC*WWQERGSHLEALPG Trigger: TCCGGGCAGAGCTTCCAGGTGGGAGCCCCGTTCTTGCCACCACAAACATGGAATGTCTTGGGTGGGTGGCAGAGCTTCTGAGGGCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR TCA 90 bp | ACGTGGAGTCATGGGAAAGCACATGTGACGATACAATGTCACTTCCCAAGGGCAGCCGGGCGGGTCCCCTaGGCCAGGGTTCCAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TWSHGKAHVTIQCHFPRAAGRVP*ARVPEC Trigger: GCACTCTGGAACCCTGGCTCAGGGGACCCGCCCGGC...TGCCCTTGGGAAGTGACATTGTATCGTCACATGTGCTTTCCCATGACTCCACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR TCA 90 bp | CAGAACAAATGGAAGACAAGAACATTAACATCCTCAGGGGTCAGGGGTCAGGGGCTGGGCTGCACTCAGTaGGCCGAGGCCGGGCGGGTC | + |
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Preference number: 2 (lower is better) Translates to: QNKWKTRTLTSSGVRGQGLGCTQ*AEAGRV Trigger: GACCCGCCCGGCCTCGGCTCACTGAGTGCAGCCCAG...CCCCTGACCCCTGACCCCTGAGGATGTTAATGTTCTTGTCTTCCATTTGTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGACCACAGACCGACATGGAGGATTCCAGAACAAATGGAAGACAAGAACAGGAGGCGGGCTCCTGTaGCCCGTTGCTCTCCCCGAC | + |
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Preference number: 2 (lower is better) Translates to: QGTTDRHGGFQNKWKTRTGGGLL*PVALPD Trigger: GTCGGGGAGAGCAACGGGTCACAGGAGCCCGCCTCC...TGTTCTTGTCTTCCATTTGTTCTGGAATCCTCCATGTCGGTCTGTGGTCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTTGGAGAGATGAGTCTCCCATCAAGGCAGGCTTCTCCAACCCTTGGCTCTGGGACACCTGTCTGTaGCCCTGTCTGAGTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LVWRDESPIKAGFSNPWLWDTCL*PCLSLQ Trigger: CTGCAGACTCAGACAGGGTCACAGACAGGTGTCCCA...GAGCCAAGGGTTGGAGAAGCCTGCCTTGATGGGAGACTCATCTCTCCAAACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CAA 90 bp | CCAGCAGAATTCTGGCTGAGGCCCAACCCACAGAGGACTAAGGCATaGGTGCCAACACAAAAGGGCTCTGTTCGTTCTTCAGAGGGTCGA | + |
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Preference number: 2 (lower is better) Translates to: PAEFWLRPNPQRTKA*VPTQKGSVRSSEGR Trigger: TCGACCCTCTGAAGAACGAACAGAGCCCTTTTGTGTTGGCACCAATGCCTTAGTCCTCTGTGGGTTGGGCCTCAGCCAGAATTCTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTTGGAGAGATGAGTCTCCCATCAAGGCAGGCTTCTCCAACCCTTGGCTCAAAGAGGCTGAGAGGTaGCTTGAGCCACACCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LVWRDESPIKAGFSNPWLKEAER*LEPHQH Trigger: ATGCTGGTGTGGCTCAAGTCACCTCTCAGCCTCTTT...GAGCCAAGGGTTGGAGAAGCCTGCCTTGATGGGAGACTCATCTCTCCAAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAGGCTTCTCCAACCCTTGGCTCGAAGAGGCTGTGCTTCCAAAGAGGCTGCAAGGGACAGACACGTaGAGTCATGGGAAAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: KAGFSNPWLEEAVLPKRLQGTDT*SHGKAH Trigger: ATGTGCTTTCCCATGACTCCACGTGTCTGTCCCTTG...CAGCCTCTTTGGAAGCACAGCCTCTTCGAGCCAAGGGTTGGAGAAGCCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGGCCACAGGTTCTCAGGTGAGACAGGCGAGTTCCAGCTTAGGCTCTGATCTGGTCAGTTCCATTTaGTGTCAGGAGCGCAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: VEATGSQVRQASSSLGSDLVSSI*CQERSS Trigger: GCTACTGCGCTCCTGACACCAAATGGAACTGACCAG...ATCAGAGCCTAAGCTGGAACTCGCCTGTCTCACCTGAGAACCTGTGGCCTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGAGGGTCGATGTAACACAGATTAAACACCAAACTGGGAACGGGTGGGAAAGCATGGCGGCTGGTTaGGGCCACAGGTTCTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LQRVDVTQIKHQTGNGWESMAAG*GHRFSG Trigger: ACCTGAGAACCTGTGGCCTCAACCAGCCGCCATGCT...TTCCCACCCGTTCCCAGTTTGGTGTTTAATCTGTGTTACATCGACCCTCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTCTCCTCAAACCAACGACAACAGAACAACAAGGGACAGACACGTGGAGTGACAGTCACTCATGTTaGGAGGCGGGCTCCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: TALLKPTTTEQQGTDTWSDSHSC*EAGSCD Trigger: GTCACAGGAGCCCGCCTCCCAACATGAGTGACTGTC...ACTCCACGTGTCTGTCCCTTGTTGTTCTGTTGTCGTTGGTTTGAGGAGAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CAA 90 bp | CCGGAGCTGAGAGGACCACGGGACTTGAGAGGTCAGGGGTTTCTTTaGGCTAAAGAGATGGAGTGTTTTGGTAACGTGGGAAGGATATGG | + |
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Preference number: 2 (lower is better) Translates to: PELRGPRDLRGQGFL*AKEMECFGNVGRIW Trigger: CCATATCCTTCCCACGTTACCAAAACACTCCATCTCTTTAGCCAAAAGAAACCCCTGACCTCTCAAGTCCCGTGGTCCTCTCAGCTCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGACCACAGACCGACATGGAGGATTCCAGAACAAATGGAAGACAAGAACAAGCCCTCAGAAGCTCTaGCACCCACCCAAGACATTC | + |
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Preference number: 2 (lower is better) Translates to: QGTTDRHGGFQNKWKTRTSPQKL*HPPKTF Trigger: GAATGTCTTGGGTGGGTGGCAGAGCTTCTGAGGGCT...TGTTCTTGTCTTCCATTTGTTCTGGAATCCTCCATGTCGGTCTGTGGTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR GCA 90 bp | CGCAGTAGCAGCGGAGTCCGAACAGCGAGCTCCATGTGCACCCAGCTTCTGAAATCCCAAGGGCAAAAATaGAACCTCAAGACACATTTT | + |
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Preference number: 2 (lower is better) Translates to: RSSSGVRTASSMCTQLLKSQGQK*NLKTHF Trigger: AAAATGTGTCTTGAGGTTGCATTTTTGCCCTTGGGA...TTTCAGAAGCTGGGTGCACATGGAGCTCGCTGTTCGGACTCCGCTGCTACTGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CAA 90 bp | CCAGCACAGCACCGTGAGGAGCAGAGGCACAAACGTCACGAGTGTTaGACCAATAGGGCTGTGTGTTTCTGGATTTTATTAGAAAGCCGT | + |
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Preference number: 2 (lower is better) Translates to: PAQHREEQRHKRHEC*TNRAVCFWILLESR Trigger: ACGGCTTTCTAATAAAATCCAGAAACACACAGCCCTATTGGTCAAACACTCGTGACGTTTGTGCCTCTGCTCCTCACGGTGCTGTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTCTCCTCAAACCAACGACAACAGAACAACAAGGGACAGACACGTGGAGTGTAGGAAAGAGATTCTaGGTTGGGTCAGCTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TALLKPTTTEQQGTDTWSVGKRF*VGSAAP Trigger: TGGAGCAGCTGACCCAACTCAGAATCTCTTTCCTAC...ACTCCACGTGTCTGTCCCTTGTTGTTCTGTTGTCGTTGGTTTGAGGAGAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGTTCCATCCGGGCCTTGTTCTGTGTGGAAGTCAACACATGGCAGACTCTCGTTACCTGTGGAAATaGTTTCTTAGCAAAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LRFHPGLVLCGSQHMADSRYLWK*FLSKGA Trigger: TGCCCCTTTGCTAAGAAATCATTTCCACAGGTAACG...AGAGTCTGCCATGTGTTGACTTCCACACAGAACAAGGCCCGGATGGAACCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR GCA 90 bp | GTGACGATACAATGTCACTTCCCAAGGGCAAAAATGCAACCTCAAGACACATTTGCCAGGGTTCCAGAGTaGACAGGCACAGATGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VTIQCHFPRAKMQPQDTFARVPE*TGTDGP Trigger: TGGCCCATCTGTGCCTGTGCACTCTGGAACCCTGGC...AAATGTGTCTTGAGGTTGCATTTTTGCCCTTGGGAAGTGACATTGTATCGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR CCA 90 bp | CAGAACAAATGGAAGACAAGAACATTAACATCCTCAGGGGTCAGGGGTCAGGGGAGAGGACTAAGGCATTaGTGCCAACACAAAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QNKWKTRTLTSSGVRGQGRGLRH*CQHKRA Trigger: AGCCCTTTTGTGTTGGCACCAATGCCTTAGTCCTCT...CCCCTGACCCCTGACCCCTGAGGATGTTAATGTTCTTGTCTTCCATTTGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR TCA 90 bp | CAGAACAAATGGAAGACAAGAACATTAACATCCTCAGGGGTCAGGGGTCAGGGGTGTGCACCCAGCTTCTaGAAGGAAGGACTTAATAGA | + |
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Preference number: 2 (lower is better) Translates to: QNKWKTRTLTSSGVRGQGCAPSF*KEGLNR Trigger: TCTATTAAGTCCTTCCTTTCAGAAGCTGGGTGCACA...CCCCTGACCCCTGACCCCTGAGGATGTTAATGTTCTTGTCTTCCATTTGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 72 bp | GACATTCACCCTGTGGCCCGGAGCACGGAGTCTTCCTaGGCTGCACTCAGTGAGCCGAGGCCGGGCGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: DIHPVARSTESS*AALSEPRPGGS Trigger: GGACCCGCCCGGCCTCGGCTCACTGAGTGCAGCCCAGGAAGACTCCGTGCTCCGGGCCACAGGGTGAATGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR-3UTR CAA 90 bp | CAAGAACGGGGCTCCCACCTGGAAGCTCTGCCCGGAGGGCATGGGCACACGCAGAGAAGGGTGCCGTGCTaGATGGGGTGGGACACCTGT | + |
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Preference number: 3 (lower is better) Translates to: QERGSHLEALPGGHGHTQRRVPC*MGWDTC Trigger: ACAGGTGTCCCACCCCATCAAGCACGGCACCCTTCT...CTGCGTGTGCCCATGCCCTCCGGGCAGAGCTTCCAGGTGGGAGCCCCGTTCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 72 bp | TTCCATGTTTGTGGTGGCAAGAACGGGGCTCCCACCTaGAAGCTCTGCCCGGAGGGCATGGGCACACGCAGC | + |
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Preference number: 3 (lower is better) Translates to: FHVCGGKNGAPT*KLCPEGMGTRS Trigger: GCTGCGTGTGCCCATGCCCTCCGGGCAGAGCTTCCAGGTGGGAGCCCCGTTCTTGCCACCACAAACATGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 72 bp | CGCGAGCACGGTAGGCCATCCGCTCTTCTCAAACCCTaGCATGCCAGCTGTCCAGCACAGCACCGTGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: REHGRPSALLKP*HASCPAQHREE Trigger: CTCCTCACGGTGCTGTGCTGGACAGCTGGCATGCCAGGGTTTGAGAAGAGCGGATGGCCTACCGTGCTCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 72 bp | GCTCTGCCACCCACCCAAGACATTCCATGTTTGTGGTaGCAAGAACGGGGCTCCCACCTGGAAGCTCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: ALPPTQDIPCLW*QERGSHLEALP Trigger: GGGCAGAGCTTCCAGGTGGGAGCCCCGTTCTTGCCACCACAAACATGGAATGTCTTGGGTGGGTGGCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR TCA 72 bp | AGAGGTGACTTGAGCCACACCAGCATGGCGGCTGGTTaGGGCCACAGGTTCTCAGGTGAGACAGGCGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: RGDLSHTSMAAG*GHRFSGETGEF Trigger: GAACTCGCCTGTCTCACCTGAGAACCTGTGGCCTCAACCAGCCGCCATGCTGGTGTGGCTCAAGTCACCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| 3UTR CCA 72 bp | GAAGCTCTGCCACCCACCCAAGACATTCCATGTTTGTaGTGGCAAGAACGGGGCTCCCACCTGGAAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: EALPPTQDIPCL*WQERGSHLEAL Trigger: CAGAGCTTCCAGGTGGGAGCCCCGTTCTTGCCACCACAAACATGGAATGTCTTGGGTGGGTGGCAGAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR TCA 72 bp | CTTGTCAACGCCAGCAACTCCCAGCAGAATTCTGGCTaGGGCCCAACCCACAGAGGACTAAGGCATTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LVNASNSQQNSG*GPTHRGLRHWC Trigger: GCACCAATGCCTTAGTCCTCTGTGGGTTGGGCCTCAGCCAGAATTCTGCTGGGAGTTGCTGGCGTTGACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CCA 72 bp | GATGAGTCTCCCATCAAGGCAGGCTTCTCCAACCCTTaGCTCGAAGAGGCTGTGCTTCCAAAGAGGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: DESPIKAGFSNP*LEEAVLPKRLR Trigger: TCTCAGCCTCTTTGGAAGCACAGCCTCTTCGAGCCAAGGGTTGGAGAAGCCTGCCTTGATGGGAGACTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CCA 72 bp | ATAGGCACAGTGGCTAAGGAACAGTGTGACAGCCGCTaGTCAGTTCCATTTGGTGTCAGGAGCGCAGTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IGTVAKEQCDSR*SVPFGVRSAVA Trigger: TGCTACTGCGCTCCTGACACCAAATGGAACTGACCAGCGGCTGTCACACTGTTCCTTAGCCACTGTGCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CCA 72 bp | GATGTAACACAGATTAAACACCAAACTGGGAACGGGTaGGAAGAGACCCCCAGGCTCCAGGGAGAAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: DVTQIKHQTGNG*EETPRLQGEAL Trigger: AAGGGCTTCTCCCTGGAGCCTGGGGGTCTCTTCCCACCCGTTCCCAGTTTGGTGTTTAATCTGTGTTACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGTAGCAGCGGAGTCCGAACAGCGAGCTCCATGTGCACCCAGCTTCTGAAACTGTTTCATAAAGCATaGGGCCATTGGCAGGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: RSSSGVRTASSMCTQLLKLFHKA*GHWQVH Trigger: ATGTACCTGCCAATGGCCCAATGCTTTATGAAACAG...TTTCAGAAGCTGGGTGCACATGGAGCTCGCTGTTCGGACTCCGCTGCTACTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR TCA 72 bp | GAGTCCGAACAGCGAGCTCCATGTGCACCCAGCTTCTaGAAGGAAGGACTTAATAGATCCAAGGGCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ESEQRAPCAPSF*KEGLNRSKGFR Trigger: CCTGAAGCCCTTGGATCTATTAAGTCCTTCCTTTCAGAAGCTGGGTGCACATGGAGCTCGCTGTTCGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR TCA 72 bp | CCAAGACACTTAAGGCAGCTAATGACTGGTTTTCCATaGGGGTTGATGGCGTGTGCGGATCTGCCGCGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PRHLRQLMTGFP*GLMACADLPRN Trigger: GTTACGCGGCAGATCCGCACACGCCATCAACCCTCATGGAAAACCAGTCATTAGCTGCCTTAAGTGTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR GCA 72 bp | CAGATAAGGTGCAGATTTCAGAGCCCTCAGAAGCTCTaGCACCCACCCAAGACATTCCATGTTTGTGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QIRCRFQSPQKL*HPPKTFHVCGG Trigger: GCCACCACAAACATGGAATGTCTTGGGTGGGTGGCAGAGCTTCTGAGGGCTCTGAAATCTGCACCTTATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCATTGGTGCCAACACAAAAGGGCTCTGTTCGTTCTTCAGAGGGTCGATGTGGAAGGGGAGGTCAGTaGAAAGGAAGTCGGGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: KALVPTQKGSVRSSEGRCGRGGQ*KGSREI Trigger: TATCTCCCGACTTCCTTTCAACTGACCTCCCCTTCC...ACATCGACCCTCTGAAGAACGAACAGAGCCCTTTTGTGTTGGCACCAATGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR-3UTR CAA 90 bp | ATTGGAGCTTGGTCAGATAAGGTGCAGATTTCAGAGCCCTCAGAAGCTCTGCCACAGAGGACTAAGGCATaGGTGCCAACACAAAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: IGAWSDKVQISEPSEALPQRTKA*VPTQKG Trigger: GCCCTTTTGTGTTGGCACCAATGCCTTAGTCCTCTG...TGGCAGAGCTTCTGAGGGCTCTGAAATCTGCACCTTATCTGACCAAGCTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CCA 72 bp | AAAGGCACTTCATCCTGTAGGAAAGAGATTCTGAGTTaGGTCAGCTGCTCCAAACCGGGACCAAGAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: KGTSSCRKEILS*VSCSKPGPRGQ Trigger: CTGTCCTCTTGGTCCCGGTTTGGAGCAGCTGACCCAACTCAGAATCTCTTTCCTACAGGATGAAGTGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CCA 72 bp | TCCATCCGGGCCTTGTTCTGTGTGGAAGTCAACACATaGCAGACTCTGAAACACCCAAGACACTTAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SIRALFCVEVNT*QTLKHPRHLRQ Trigger: CTGCCTTAAGTGTCTTGGGTGTTTCAGAGTCTGCCATGTGTTGACTTCCACACAGAACAAGGCCCGGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAAAGTCACCTCACAACATCGCACCGTGTCAGCAGGATCTTCACCCACTGCTTTGGCCCTTCAGTTTaGTTTTTGTCCCCAAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: PQSHLTTSHRVSRIFTHCFGPSV*FLSPNF Trigger: AAAGTTTGGGGACAAAAACAAAACTGAAGGGCCAAA...GCAGTGGGTGAAGATCCTGCTGACACGGTGCGATGTTGTGAGGTGACTTTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CCA 72 bp | AAAAGGAACCGGCTGTTTCATAAAGCATTGGGCCATTaGCAGGTACATTCCAGCCTGGTCGGAAACGACACA | + |
|
Preference number: 3 (lower is better) Translates to: KRNRLFHKALGH*QVHSSLVGNDT Trigger: TGTGTCGTTTCCGACCAGGCTGGAATGTACCTGCCAATGGCCCAATGCTTTATGAAACAGCCGGTTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGGAGTCATGGGAAAGCACATGTGACGATACAATGTCACTTCCCAAGGGCACCGGGGTCTATAAAATaGTCCTGTTCGTCTTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TWSHGKAHVTIQCHFPRAPGSIK*SCSSSQ Trigger: CTGAGAAGACGAACAGGACAATTTTATAGACCCCGG...TGCCCTTGGGAAGTGACATTGTATCGTCACATGTGCTTTCCCATGACTCCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR TCA 72 bp | TTCAAAAAGGCACTTCATCCTGTAGGAAAGAGATTCTaGGTTGGGTCAGCTGCTCCAAACCGGGACCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FKKALHPVGKRF*VGSAAPNRDQE Trigger: CTCTTGGTCCCGGTTTGGAGCAGCTGACCCAACTCAGAATCTCTTTCCTACAGGATGAAGTGCCTTTTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CCA 72 bp | GACAACAGAACAACAAGGGACAGACACGTGGAGTCATaGGAAAGCACATGTGACGATACAATGTCACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: DNRTTRDRHVES*ESTCDDTMSLP Trigger: GGGAAGTGACATTGTATCGTCACATGTGCTTTCCCATGACTCCACGTGTCTGTCCCTTGTTGTTCTGTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGAGGGTCGATGTAACACAGATTAAACACCAAACTGGGAACGGGTGGGAATTTGTCCCCAAACTTTaGTGCCCTTCGGCATTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LQRVDVTQIKHQTGNGWEFVPKL*CPSAFL Trigger: CAAGAATGCCGAAGGGCACAAAAGTTTGGGGACAAA...TTCCCACCCGTTCCCAGTTTGGTGTTTAATCTGTGTTACATCGACCCTCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR TCA 72 bp | GCGGATCTGCCGCGTAACTGTCGTTACCTGTGGAAATaGTTTCTTAGCAAAGGGGCAGTCTCGGTTTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: ADLPRNCRYLWK*FLSKGAVSVLI Trigger: AATTAAAACCGAGACTGCCCCTTTGCTAAGAAATCATTTCCACAGGTAACGACAGTTACGCGGCAGATCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR TCA 72 bp | GAGGACAGGTTTGTCTGCTTGGAAGGGGAGGTCAGTTaGAAGGAAGTCGGGAGATATCAAAGTTTTTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: EDRFVCLEGEVS*KEVGRYQSFCF Trigger: AAAGCAAAAACTTTGATATCTCCCGACTTCCTTTCAACTGACCTCCCCTTCCAAGCAGACAAACCTGTCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR GCA 72 bp | CTTAATAGATCCAAGGGCTTCAGGGCTTTCTCTAACTaGTCTCCTCAAACCAACGACAACAGAACAACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LNRSKGFRAFSN*SPQTNDNRTTR Trigger: CCTTGTTGTTCTGTTGTCGTTGGTTTGAGGAGAGCAGTTAGAGAAAGCCCTGAAGCCCTTGGATCTATTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR GCA 72 bp | AGAAAGCCGTCTTTGAAATACAGGGTTGTAAAATGCTaGCAGGCTCTACACACTTTTAGGATTCATCTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: RKPSLKYRVVKC*QALHTFRIHLR Trigger: ACGGAGATGAATCCTAAAAGTGTGTAGAGCCTGGCAGCATTTTACAACCCTGTATTTCAAAGACGGCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR GCA 72 bp | ATTAGAAAGCCGTCTTTGAAATACAGGGTTGTAAAATaGTGCCAGGCTCTACACACTTTTAGGATTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: IRKPSLKYRVVK*CQALHTFRIHL Trigger: GAGATGAATCCTAAAAGTGTGTAGAGCCTGGCAGCATTTTACAACCCTGTATTTCAAAGACGGCTTTCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR CCA 90 bp | CAAGAACGGGGCTCCCACCTGGAAGCTCTGCCCGGAGGGCATGGGCACACGCAGGCACACTGGGGCTGTTaGCCGGAGGGGCTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QERGSHLEALPGGHGHTQAHWGC*PEGLPH Trigger: ATGTGGAAGCCCCTCCGGCCAACAGCCCCAGTGTGC...CTGCGTGTGCCCATGCCCTCCGGGCAGAGCTTCCAGGTGGGAGCCCCGTTCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR TCA 90 bp | GAGGGCATGGGCACACGCAGCCCCGGGGCTGTAAGGCCAAGGGTTGGCCTCGAAGGCTTGGTACGGGAATaGCCTGCCTCTGGTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGMGTRSPGAVRPRVGLEGLVRE*PASGHP Trigger: AGGGTGACCAGAGGCAGGTCATTCCCGTACCAAGCC...TTCGAGGCCAACCCTTGGCCTTACAGCCCCGGGGCTGCGTGTGCCCATGCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR TCA 90 bp | CCCGGAGGGCATGGGCACACGCAGCCCCGGGGCTGTAAGGCCAAGGGTTGGCCTGAGAATTGTCCACGATaGTCACTTTGCTCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGGHGHTQPRGCKAKGWPENCPR*SLCSAP Trigger: GGGAGCTGAGCAAAGTGATCATCGTGGACAATTCTC...AGGCCAACCCTTGGCCTTACAGCCCCGGGGCTGCGTGTGCCCATGCCCTCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGGCTTCTCCAACCCTTGGCTCGAAGAGGCTGTGCTTCCAAAGAGGCTGGTGGCGGAAGCACACTaGGGCTGTTGGCCGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGFSNPWLEEAVLPKRLVAEAH*GCWPEG Trigger: CCCCTCCGGCCAACAGCCCCAGTGTGCTTCCGCCAC...CAGCCTCTTTGGAAGCACAGCCTCTTCGAGCCAAGGGTTGGAGAAGCCTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR CCA 90 bp | CCCGGAGGGCATGGGCACACGCAGCCCCGGGGCTGTAAGGCCAAGGGTTGGCCTCATACACCTGGTGTATaGTTCCGTCGATTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PGGHGHTQPRGCKAKGWPHTPGV*FRRFQQ Trigger: CTGTTGAAATCGACGGAACCATACACCAGGTGTATG...AGGCCAACCCTTGGCCTTACAGCCCCGGGGCTGCGTGTGCCCATGCCCTCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR TCA 90 bp | CGCAGTAGCAGCGGAGTCCGAACAGCGAGCTCCATGTGCACCCAGCTTCTGAAACCTCGAAGAACGGGATaGGGTCCAACAGCTCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSSSGVRTASSMCTQLLKPRRTG*GPTAPC Trigger: ACACGGAGCTGTTGGACCTCATCCCGTTCTTCGAGG...TTTCAGAAGCTGGGTGCACATGGAGCTCGCTGTTCGGACTCCGCTGCTACTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR GCA 90 bp | CGCAGTAGCAGCGGAGTCCGAACAGCGAGCTCCATGTGCACCCAGCTTCTGAAAGTCGGCAACAGGGTCTaGATACTTGGCCAAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSSSGVRTASSMCTQLLKVGNRV*ILGQAG Trigger: GCCAGCTTGGCCAAGTATGCAGACCCTGTTGCCGAC...TTTCAGAAGCTGGGTGCACATGGAGCTCGCTGTTCGGACTCCGCTGCTACTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGGCTTCTCCAACCCTTGGCTCGAAGAGGCTGTGCTTCCAAAGAGGCTGAGGAACTCGTCCACGTaGGGTCGCTTCAGCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: KAGFSNPWLEEAVLPKRLRNSST*GRFSTY Trigger: GTATGTGCTGAAGCGACCTCACGTGGACGAGTTCCT...CAGCCTCTTTGGAAGCACAGCCTCTTCGAGCCAAGGGTTGGAGAAGCCTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CAA 72 bp | TCAGAAGCTCTGCCACCCACCCAAGACATTCCATGTTaGTGGTGGCAAGAACGGGGCTCCCACCTGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEALPPTQDIPC*WWQERGSHLEA Trigger: AGCTTCCAGGTGGGAGCCCCGTTCTTGCCACCACAAACATGGAATGTCTTGGGTGGGTGGCAGAGCTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR GCA 90 bp | CGCAGTAGCAGCGGAGTCCGAACAGCGAGCTCCATGTGCACCCAGCTTCTGAAAGGCTTAAACGAACTGTaGACCAGGGTTTCGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSSSGVRTASSMCTQLLKGLNEL*TRVSSR Trigger: TCTAGACGAAACCCTGGTGCACAGTTCGTTTAAGCC...TTTCAGAAGCTGGGTGCACATGGAGCTCGCTGTTCGGACTCCGCTGCTACTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR GCA 90 bp | CACAAGGACAGTCAGGAGAAAAGTCATGTCAGGGGGAGCGAGATCCCATGCACGACACACTCAAAGAGCTaGCCCATCCTCTGGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HKDSQEKSHVRGSEIPCTTHSKS*PILWRN Trigger: GTTCCTCCAGAGGATGGGGCAGCTCTTTGAGTGTGT...CGTGCATGGGATCTCGCTCCCCCTGACATGACTTTTCTCCTGACTGTCCTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR GCA 90 bp | CCCCAAAGTCACCTCACAACATCGCACCGTGTCAGCAGGATCTTCACCCACTGCAGAGTCTGTGCAGCATaGTGTAGACATCGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQSHLTTSHRVSRIFTHCRVCAA*CRHRLP Trigger: GGGAAGACGATGTCTACAGCATGCTGCACAGACTCT...GCAGTGGGTGAAGATCCTGCTGACACGGTGCGATGTTGTGAGGTGACTTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CAA 72 bp | TTCTGGCTGAGGCCCAACCCACAGAGGACTAAGGCATaGGTGCCAACACAAAAGGGCTCTGTTCGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FWLRPNPQRTKA*VPTQKGSVRSS Trigger: TGAAGAACGAACAGAGCCCTTTTGTGTTGGCACCAATGCCTTAGTCCTCTGTGGGTTGGGCCTCAGCCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR TCA 90 bp | GTTGAGGCCACAGGTTCTCAGGTGAGACAGGCGAGTTCCAGCTTAGGCTCTGATTTTGCTTCTTTAGGCTaGTGTTGCGCTGGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VEATGSQVRQASSSLGSDFASLG*CCAGKL Trigger: AAGCTTCCCAGCGCAACATCAGCCTAAAGAAGCAAA...ATCAGAGCCTAAGCTGGAACTCGCCTGTCTCACCTGAGAACCTGTGGCCTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CAA 72 bp | AGAGGACCACGGGACTTGAGAGGTCAGGGGTTTCTTTaGGCTAAAGAGATGGAGTGTTTTGGTAACGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGPRDLRGQGFL*AKEMECFGNVG Trigger: TCCCACGTTACCAAAACACTCCATCTCTTTAGCCAAAAGAAACCCCTGACCTCTCAAGTCCCGTGGTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR GCA 90 bp | ATTGGAGCTTGGTCAGATAAGGTGCAGATTTCAGAGCCCTCAGAAGCTCTGCCAATGCTCCGACCCCTTTaGTTCTTTAGGCTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IGAWSDKVQISEPSEALPMLRPL*FFRLML Trigger: CAACATCAGCCTAAAGAAGCAAAGGGGTCGGAGCAT...TGGCAGAGCTTCTGAGGGCTCTGAAATCTGCACCTTATCTGACCAAGCTCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CAA 72 bp | AACCATCATAAAAGGAACCGGCTGTTTCATAAAGCATaGGGCCATTGGCAGGTACATTCCAGCCTGGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NHHKRNRLFHKA*GHWQVHSSLVG Trigger: TCCGACCAGGCTGGAATGTACCTGCCAATGGCCCAATGCTTTATGAAACAGCCGGTTCCTTTTATGATGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR CCA 90 bp | GTGACGATACAATGTCACTTCCCAAGGGCAAAAATGCAACCTCAAGACACATTTGAGCACCGTCACCTCTaGAAGGAGGTATTTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTIQCHFPRAKMQPQDTFEHRHL*KEVFSW Trigger: CCAGCTAAATACCTCCTTCCAGAGGTGACGGTGCTC...AAATGTGTCTTGAGGTTGCATTTTTGCCCTTGGGAAGTGACATTGTATCGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CAA 72 bp | CACCGTGAGGAGCAGAGGCACAAACGTCACGAGTGTTaGACCAATAGGGCTGTGTGTTTCTGGATTTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: HREEQRHKRHEC*TNRAVCFWILL Trigger: TAATAAAATCCAGAAACACACAGCCCTATTGGTCAAACACTCGTGACGTTTGTGCCTCTGCTCCTCACGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| 3UTR CAA 72 bp | CTTAAGAAAATAAACCTCGAACATTCGTCTCCTTTCTaGGCCTTGTTAGAGTTCTATTGCTTCATTTACACG | + |
|
Preference number: 4 (lower is better) Translates to: LKKINLEHSSPF*ALLEFYCFIYT Trigger: CGTGTAAATGAAGCAATAGAACTCTAACAAGGCCAAGAAAGGAGACGAATGTTCGAGGTTTATTTTCTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCTGCACTCAGTGAGCCGAGGCCGGGCGGGTCCCCTGAGCCAGGGTTCCAGCACACTGGGGCTGTaGGCCGGAGGGGCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PGLHSVSRGRAGPLSQGSSTLGL*AGGAST Trigger: TGTGGAAGCCCCTCCGGCCAACAGCCCCAGTGTGCT...GGAACCCTGGCTCAGGGGACCCGCCCGGCCTCGGCTCACTGAGTGCAGCCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
||
| CDS CCA 90 bp | GCCCACCGTTCTCCTCCACCAGTGGCGGAAGCACACTGGGGCTGTTaGCCGGAGGGGCTTCCACATTGTAGTCTCGGAAGCAGCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AHRSPPPVAEAHWGC*PEGLPHCSLGSSRR Trigger: TCTTCTGCTGCTTCCGAGACTACAATGTGGAAGCCCCTCCGGCCAACAGCCCCAGTGTGCTTCCGCCACTGGTGGAGGAGAACGGTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073109.12 ENSMUST00000172464.2 |
||
| CDS CCA 90 bp | CTAAGGATGCTCCGACCCCTTTGCTTCTTTAGGCTGATGTTGCGCTaGGAAGCTTTTTCGCCCGCGACGGGCGACCGGGCCTCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRMLRPLCFFRLMLR*EAFSPATGDRASSS Trigger: GGAGGATGAGGCCCGGTCGCCCGTCGCGGGCGAAAAAGCTTCCCAGCGCAACATCAGCCTAAAGAAGCAAAGGGGTCGGAGCATCCTTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073109.12 ENSMUST00000172464.2 |
||
| CDS GCA 90 bp | TCTCGGAAGCAGCAGAAGAAAGAGCTAAGGATGCTCCGACCCCTTTaGTTCTTTAGGCTGATGTTGCGCTGGGAAGCTTTTTCGCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SRKQQKKELRMLRPL*FFRLMLRWEAFSPA Trigger: CGCGGGCGAAAAAGCTTCCCAGCGCAACATCAGCCTAAAGAAGCAAAGGGGTCGGAGCATCCTTAGCTCTTTCTTCTGCTGCTTCCGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073109.12 ENSMUST00000172464.2 |
||
| CDS-3UTR CAA 90 bp | CACAAGGACAGTCAGGAGAAAAGTCATGTCAGGGGGAGCGAGATCCCATGCACGACAGGGTCTGCATACTaGGCCAAGCTGGCAGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HKDSQEKSHVRGSEIPCTTGSAY*AKLAVK Trigger: CTTTACTGCCAGCTTGGCCAAGTATGCAGACCCTGT...CGTGCATGGGATCTCGCTCCCCCTGACATGACTTTTCTCCTGACTGTCCTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| CDS-3UTR CAA 90 bp | CAGAACAAATGGAAGACAAGAACATTAACATCCTCAGGGGTCAGGGGTCAGGGGTCCACGATGATCACTTaGCTCAGCTCCCGTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: QNKWKTRTLTSSGVRGQGSTMIT*LSSRPR Trigger: CCTGGGACGGGAGCTGAGCAAAGTGATCATCGTGGA...CCCCTGACCCCTGACCCCTGAGGATGTTAATGTTCTTGTCTTCCATTTGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| CDS CCA 90 bp | ATCAATGACCACACATTTCTTTCCATAGTCGAGCACCGTCACCTCTaGAAGGAGGTATTTAGCTGGTGGGCTTGGTACGGGAATGACCTG | + |
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Preference number: 5 (lower is better) Translates to: INDHTFLSIVEHRHL*KEVFSWWAWYGNDL Trigger: CAGGTCATTCCCGTACCAAGCCCACCAGCTAAATACCTCCTTCCAGAGGTGACGGTGCTCGACTATGGAAAGAAATGTGTGGTCATTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| CDS-3UTR CAA 90 bp | AAAAGCAATACCCGTATTTACCTTAAGAAAATAAACCTCGAACATTCGTCTCCTCGGGCCTCATCCTCCTaGGGGTTGGTCACCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: KSNTRIYLKKINLEHSSPRASSS*GLVTWV Trigger: CACCCAGGTGACCAACCCCAAGGAGGATGAGGCCCG...AGGAGACGAATGTTCGAGGTTTATTTTCTTAAGGTAAATACGGGTATTGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| CDS CCA 72 bp | TCTCCTCCACCAGTGGCGGAAGCACACTGGGGCTGTTaGCCGGAGGGGCTTCCACATTGTAGTCTCGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SPPPVAEAHWGC*PEGLPHCSLGS Trigger: GCTTCCGAGACTACAATGTGGAAGCCCCTCCGGCCAACAGCCCCAGTGTGCTTCCGCCACTGGTGGAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073109.12 ENSMUST00000172464.2 |
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| CDS CAA 90 bp | AAAGAGCTAAGGATGCTCCGACCCCTTTGCTTCTTTAGGCTGATGTaGCGCTGGGAAGCTTTTTCGCCCGCGACGGGCGACCGGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: KELRMLRPLCFFRLM*RWEAFSPATGDRAS Trigger: TGAGGCCCGGTCGCCCGTCGCGGGCGAAAAAGCTTCCCAGCGCAACATCAGCCTAAAGAAGCAAAGGGGTCGGAGCATCCTTAGCTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073109.12 ENSMUST00000172464.2 |
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| CDS TCA 72 bp | CATCGTCTTCCCTGCTCAGGCCCTCGAAGAACGGGATaGGGTCCAACAGCTCCGTGTCTGTCATGTCGTCAA | + |
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Preference number: 6 (lower is better) Translates to: HRLPCSGPRRTG*GPTAPCLSCRQ Trigger: TTGACGACATGACAGACACGGAGCTGTTGGACCTCATCCCGTTCTTCGAGGGCCTGAGCAGGGAAGACGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073109.12 ENSMUST00000172464.2 |
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| CDS CCA 72 bp | CACACATTTCTTTCCATAGTCGAGCACCGTCACCTCTaGAAGGAGGTATTTAGCTGGTGGGCTTGGTACGGG | + |
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Preference number: 6 (lower is better) Translates to: HTFLSIVEHRHL*KEVFSWWAWYG Trigger: CCCGTACCAAGCCCACCAGCTAAATACCTCCTTCCAGAGGTGACGGTGCTCGACTATGGAAAGAAATGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073109.12 |
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| CDS GCA 72 bp | CAGCAGAAGAAAGAGCTAAGGATGCTCCGACCCCTTTaGTTCTTTAGGCTGATGTTGCGCTGGGAAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: QQKKELRMLRPL*FFRLMLRWEAF Trigger: AAAAGCTTCCCAGCGCAACATCAGCCTAAAGAAGCAAAGGGGTCGGAGCATCCTTAGCTCTTTCTTCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073109.12 ENSMUST00000172464.2 |
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