Pregenerated sensors for CTDSP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078429Ensembl transcript IDs: ENSMUST00000105255.3, ENSMUST00000105256.10
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCCTGAAGACCAGTCTGCACTGGGGCAGGCGGGCTGGTGGCAGTaGAGCAAGGGCTTCAGGAGGCACTGGCTCCTCTCACTTGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: TPEDQSALGQAGWWQ*SKGFRRHWLLSLAL Trigger: GAGGGCAAGTGAGAGGAGCCAGTGCCTCCTGAAGCCCTTGCTCCACTGCCACCAGCCCGCCTGCCCCAGTGCAGACTGGTCTTCAGGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR GCA 90 bp | GGGAGTGAGAGGCTGGCCTGGCACTGGAGCCCGGGTACAGAGAAGTaGCCATGGCAGGCATTCTTGCTGGAGCCAGGTGTAGCCCATAGG | + |
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Preference number: 1 (lower is better) Translates to: GSERLAWHWSPGTEK*PWQAFLLEPGVAHR Trigger: CCTATGGGCTACACCTGGCTCCAGCAAGAATGCCTGCCATGGGCACTTCTCTGTACCCGGGCTCCAGTGCCAGGCCAGCCTCTCACTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CCA 90 bp | CTCCAGGGCAGAGAGAAGACCTCCTTTCCCATGGGAGTAGGACTATaGCTTGGGAGTGAGAGGCTGGCCTGGCACTGGAGCCCGGGTACA | + |
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Preference number: 1 (lower is better) Translates to: LQGREKTSFPMGVGL*LGSERLAWHWSPGT Trigger: TGTACCCGGGCTCCAGTGCCAGGCCAGCCTCTCACTCCCAAGCCATAGTCCTACTCCCATGGGAAAGGAGGTCTTCTCTCTGCCCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CCA 90 bp | CCAAGGCTCCATAGCCTCGGGCCCAGGAAGAAGTCTGCAGAGTGCTaGAGGAATGCCAGCCAGTCTCCACTCACACCACCACACTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: PRLHSLGPRKKSAEC*RNASQSPLTPPHSS Trigger: GGAGGAGTGTGGTGGTGTGAGTGGAGACTGGCTGGCATTCCTCCAGCACTCTGCAGACTTCTTCCTGGGCCCGAGGCTATGGAGCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR TCA 90 bp | AGAGAAGACCTCCTTTCCCATGGGAGTAGGACTATGGCTTGGGAGTaGGAGGCTGGCCTGGCACTGGAGCCCGGGTACAGAGAAGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: REDLLSHGSRTMAWE*EAGLALEPGYREVP Trigger: GGGCACTTCTCTGTACCCGGGCTCCAGTGCCAGGCCAGCCTCTCACTCCCAAGCCATAGTCCTACTCCCATGGGAAAGGAGGTCTTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CCA 90 bp | ATGGGAGTAGGACTATGGCTTGGGAGTGAGAGGCTGGCCTGGCACTaGAGCCCGGGTACAGAGAAGTGCCCATGGCAGGCATTCTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: MGVGLWLGSERLAWH*SPGTEKCPWQAFLL Trigger: CAGCAAGAATGCCTGCCATGGGCACTTCTCTGTACCCGGGCTCCAGTGCCAGGCCAGCCTCTCACTCCCAAGCCATAGTCCTACTCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CCA 90 bp | TTTCCCATGGGAGTAGGACTATGGCTTGGGAGTGAGAGGCTGGCCTaGCACTGGAGCCCGGGTACAGAGAAGTGCCCATGGCAGGCATTC | + |
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Preference number: 1 (lower is better) Translates to: FPMGVGLWLGSERLA*HWSPGTEKCPWQAF Trigger: GAATGCCTGCCATGGGCACTTCTCTGTACCCGGGCTCCAGTGCCAGGCCAGCCTCTCACTCCCAAGCCATAGTCCTACTCCCATGGGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR TCA 90 bp | ACCTGGGAACTGAGCACGGGGTGCAGAGAGCTCTGGGTCTTGGTCTaGTTTCCTGCTCTGCGTGTGACCTGCTTTTGTCCCACACGCCCT | + |
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Preference number: 1 (lower is better) Translates to: TWELSTGCRELWVLV*FPALRVTCFCPTRP Trigger: AGGGCGTGTGGGACAAAAGCAGGTCACACGCAGAGCAGGAAATCAGACCAAGACCCAGAGCTCTCTGCACCCCGTGCTCAGTTCCCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR TCA 90 bp | CCCCTCCTGCAGTATTGGGATGCCAGTGAGATCAGGGTCTGGACCTaGAGCCACAGTCAAGCTCCCATGTTCCTGGCTAGCACCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PLLQYWDASEIRVWT*SHSQAPMFLASTCS Trigger: GCTGCAGGTGCTAGCCAGGAACATGGGAGCTTGACTGTGGCTTCAGGTCCAGACCCTGATCTCACTGGCATCCCAATACTGCAGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CCA 90 bp | AGATCAGGGTCTGGACCTGAAGCCACAGTCAAGCTCCCATGTTCCTaGCTAGCACCTGCAGCCCTCAGCTCACCTTGGGAGGACCCTACA | + |
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Preference number: 1 (lower is better) Translates to: RSGSGPEATVKLPCS*LAPAALSSPWEDPT Trigger: TGTAGGGTCCTCCCAAGGTGAGCTGAGGGCTGCAGGTGCTAGCCAGGAACATGGGAGCTTGACTGTGGCTTCAGGTCCAGACCCTGATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR GCA 90 bp | ACTGAGCACGGGGTGCAGAGAGCTCTGGGTCTTGGTCTGATTTCCTaGTCTGCGTGTGACCTGCTTTTGTCCCACACGCCCTGGCTACTT | + |
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Preference number: 1 (lower is better) Translates to: TEHGVQRALGLGLIS*SACDLLLSHTPWLL Trigger: AAGTAGCCAGGGCGTGTGGGACAAAAGCAGGTCACACGCAGAGCAGGAAATCAGACCAAGACCCAGAGCTCTCTGCACCCCGTGCTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR TCA 90 bp | TCAGAGCTTTGTGAGAAGACCCCTCCTGCAGTATTGGGATGCCAGTaGGATCAGGGTCTGGACCTGAAGCCACAGTCAAGCTCCCATGTT | + |
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Preference number: 1 (lower is better) Translates to: SELCEKTPPAVLGCQ*DQGLDLKPQSSSHV Trigger: AACATGGGAGCTTGACTGTGGCTTCAGGTCCAGACCCTGATCTCACTGGCATCCCAATACTGCAGGAGGGGTCTTCTCACAAAGCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR TCA 90 bp | GTGTTCCCAATGGTAGCTTTCCACTTTGGGGAAACTTCCACTCTGTaGCTGACATTGAAAGCAACAGGGCTGAGAGCTCAGAGCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: VFPMVAFHFGETSTL*LTLKATGLRAQSCP Trigger: TGGGCAGCTCTGAGCTCTCAGCCCTGTTGCTTTCAATGTCAGTCACAGAGTGGAAGTTTCCCCAAAGTGGAAAGCTACCATTGGGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR TCA 90 bp | CAGCCTTTGGAGCTAATGTCCTTGCATCAGCTAGCACAGAACCCCTaGAGAGCACTTTTGGGATCTACACGCAAGGAGACAGACATCTTG | + |
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Preference number: 1 (lower is better) Translates to: QPLELMSLHQLAQNP*RALLGSTRKETDIL Trigger: CAAGATGTCTGTCTCCTTGCGTGTAGATCCCAAAAGTGCTCTTCAGGGGTTCTGTGCTAGCTGATGCAAGGACATTAGCTCCAAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR GCA 90 bp | AGAGCAGGTCATGGACCTATAAGGGACCCATCTCCCAGGAATGGTTaGTGTGAGGGTCCCATGCTTTTAGTACAAAGCTTTTCTGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: RAGHGPIRDPSPRNG*CEGPMLLVQSFSEP Trigger: TGGCTCAGAAAAGCTTTGTACTAAAAGCATGGGACCCTCACAGCAACCATTCCTGGGAGATGGGTCCCTTATAGGTCCATGACCTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CCA 90 bp | AGAAGTAACAGGGCTCCCATGAAGCCACACTGGGCTTTGGTCACATaGAGAACCAAGAAGCCAGAAAGGGACCTTAAAATTCAATCAACT | + |
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Preference number: 1 (lower is better) Translates to: RSNRAPMKPHWALVT*RTKKPERDLKIQST Trigger: AGTTGATTGAATTTTAAGGTCCCTTTCTGGCTTCTTGGTTCTCCATGTGACCAAAGCCCAGTGTGGCTTCATGGGAGCCCTGTTACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGTTGGGAGTGAGAGGCTaGCCTGGCACTGGAGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVLGVRG*PGTGAR Trigger: CCGGGCTCCAGTGCCAGGCCAGCCTCTCACTCCCAA...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGCTTAAGGCAGTGAGGTaGAGGCCCCTCAGGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVLKAVR*RPLRGP Trigger: GGGGCCCCTGAGGGGCCTCCACCTCACTGCCTTAAG...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGAGTCCCCTGTTGGGATaGCCGTTTCTTGGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GLQGKQRWGRNSRPPRRESPLLG*PFLGAG Trigger: TCCTGCTCCAAGAAACGGCCATCCCAACAGGGGACT...CTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGCCTCAGGCCCAGGACTaGAGCTCGGGCGAATATAAA | + |
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Preference number: 2 (lower is better) Translates to: GLQGKQRWGRNSRPPRREPQAQD*SSGEYK Trigger: TTTATATTCGCCCGAGCTCCAGTCCTGGGCCTGAGG...CTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGGCACTTCTCCCAAGGCTCTaGAGAGGAAGAGCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LQGKQRWGRNSRPPRREALLPRL*RGRAAA Trigger: GGCTGCTGCTCTTCCTCTCCAGAGCCTTGGGAGAAG...TGCCTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGACTATGGCTTGGGAGTaGGAGGCTGGCCTGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVTMAWE*EAGLAL Trigger: CAGTGCCAGGCCAGCCTCTCACTCCCAAGCCATAGT...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGCAGCAGCCGAGAAGGATAAAGGCGAGAGCAGACGAGAGCTGGCCAGGAGTGAGAGGCTGGCCTaGCACTGGAGCCCGGGTACA | + |
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Preference number: 2 (lower is better) Translates to: GRAAAEKDKGESRRELARSERLA*HWSPGT Trigger: TGTACCCGGGCTCCAGTGCCAGGCCAGCCTCTCACT...CCTGGCCAGCTCTCGTCTGCTCTCGCCTTTATCCTTCTCGGCTGCTGCTCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGCCAGCACTCAGGGGGTaGAGGCAGGAGACCAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQPALRG*RQETSS Trigger: TGAGCTGGTCTCCTGCCTCCACCCCCTGAGTGCTGG...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGCTAGCACAGAACCCCTaGAGAGCACTTTTGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: GLQGKQRWGRNSRPPRRELAQNP*RALLGS Trigger: AGATCCCAAAAGTGCTCTTCAGGGGTTCTGTGCTAG...CTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGGCCCTCAGCTCACCTTaGGAGGACCCTACAGACACC | + |
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Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQALSSP*EDPTDT Trigger: GGTGTCTGTAGGGTCCTCCCAAGGTGAGCTGAGGGC...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 90 bp | TGGCACTGGAGCCCGGGTACAGAGAAGTGCCCATGGCAGGCATTCTaGCTGGAGCCAGGTGTAGCCCATAGGACACAGAACCTGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: WHWSPGTEKCPWQAF*LEPGVAHRTQNLVG Trigger: ACCCACCAGGTTCTGTGTCCTATGGGCTACACCTGGCTCCAGCAAGAATGCCTGCCATGGGCACTTCTCTGTACCCGGGCTCCAGTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR TCA 90 bp | AGTACAACCGGGGAAAGTCCTTCTCCCAAGGCTCTGGAGAGGAAGAGCAGCAGCCAACCACCTGGGAACTaGGCACGGGGTGCAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: STTGESPSPKALERKSSSQPPGN*ARGAES Trigger: GCTCTCTGCACCCCGTGCTCAGTTCCCAGGTGGTTG...GCTGCTGCTCTTCCTCTCCAGAGCCTTGGGAGAAGGACTTTCCCCGGTTGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR TCA 90 bp | GCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGCGATCAGCCCTCAGAGCTTTGTaGGAAGACCCCTCCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: AITCNPSTQEVEAGDQRSALRAL*EDPSCS Trigger: ACTGCAGGAGGGGTCTTCTCACAAAGCTCTGAGGGC...TGATCGCTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR TCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGCTGCCAAGAGGCCTCTaGACAGAGCAGGTCATGGAC | + |
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Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQLPRGL*TEQVMD Trigger: GTCCATGACCTGCTCTGTTCAGAGGCCTCTTGGCAG...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGGCACTTGGTCTGATTTCCTaGTCTGCGTGTGACCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LQGKQRWGRNSRPPRREALGLIS*SACDLL Trigger: AAGCAGGTCACACGCAGAGCAGGAAATCAGACCAAG...TGCCTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGAGAGTGCTGGAGGAATaGCAGCCAGTCTCCACTCAC | + |
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Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVRVLEE*QPVSTH Trigger: GTGAGTGGAGACTGGCTGGCATTCCTCCAGCACTCT...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGGCCAACACACTGGATaGAGGACAGCACAAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVGQHTG*RTAQTG Trigger: GCCTGTTTGTGCTGTCCTGCATCCAGTGTGTTGGCC...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGTAAGAGGACTCTGGTaGCAGTCAGGCCTAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVVRGLW*QSGLES Trigger: GCTCTCTAGGCCTGACTGCCACCAGAGTCCTCTTAC...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 90 bp | GCTCTGGGTCTTGGTCTGATTTCCTGCTCTGCGTGTGACCTGCTTTaGTCCCACACGCCCTGGCTACTTGCAGACCCCGTCAGTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: ALGLGLISCSACDLL*SHTPWLLADPVSEA Trigger: AGCCTCACTGACGGGGTCTGCAAGTAGCCAGGGCGTGTGGGACAAAAGCAGGTCACACGCAGAGCAGGAAATCAGACCAAGACCCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 90 bp | CAAGCTCCCATGTTCCTGGCTAGCACCTGCAGCCCTCAGCTCACCTaGGGAGGACCCTACAGACACCAGCAAATGAGGCTGGGGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: QAPMFLASTCSPQLT*GGPYRHQQMRLGKW Trigger: CCATTTCCCCAGCCTCATTTGCTGGTGTCTGTAGGGTCCTCCCAAGGTGAGCTGAGGGCTGCAGGTGCTAGCCAGGAACATGGGAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGCAGCAGCCGAGAAGGATAAAGGCGAGAGCAGACGAGAGCTGGCCAGGTTCCTGCTCTGCGTGTaGCCTGCTTTTGTCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: GRAAAEKDKGESRRELARFLLCV*PAFVPH Trigger: GTGTGGGACAAAAGCAGGTCACACGCAGAGCAGGAA...CCTGGCCAGCTCTCGTCTGCTCTCGCCTTTATCCTTCTCGGCTGCTGCTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR TCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGTTCCTGCTCTGCGTGTaGCCTGCTTTTGTCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQFLLCV*PAFVPH Trigger: GTGTGGGACAAAAGCAGGTCACACGCAGAGCAGGAA...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGACAGACACCAGCAAATaGGGCTGGGGAAATGGCATG | + |
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Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVTDTSK*GWGNGM Trigger: CATGCCATTTCCCCAGCCTCATTTGCTGGTGTCTGT...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR TCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGTGGTCTACTGACTCCTaGAGACCAGTCTGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQWSTDS*RPVCTG Trigger: CCCAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCA...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR GCA 90 bp | GCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGCGATCACCGGGTACAGAGAAGTaGCCATGGCAGGCATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: AITCNPSTQEVEAGDQRSPGTEK*PWQAFL Trigger: CAAGAATGCCTGCCATGGGCACTTCTCTGTACCCGG...TGATCGCTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR GCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGAGAGTGCTGGAGGAATaGCAGCCAGTCTCCACTCAC | + |
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Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQRVLEE*QPVSTH Trigger: GTGAGTGGAGACTGGCTGGCATTCCTCCAGCACTCT...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR GCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGGCCCAGGAAGAAGTCTaGAGAGTGCTGGAGGAATGC | + |
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Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQAQEEV*RVLEEC Trigger: GCATTCCTCCAGCACTCTGCAGACTTCTTCCTGGGC...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCTATCACCTGTAACCCCAGCACTCAGGGGGTGGAGGCAGGAGACCAGCTCAAGTCCCCTGTTGGGATaGCCGTTTCTTGGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QLSPVTPALRGWRQETSSSPLLG*PFLGAG Trigger: TCCTGCTCCAAGAAACGGCCATCCCAACAGGGGACT...TGAGCTGGTCTCCTGCCTCCACCCCCTGAGTGCTGGGGTTACAGGTGATAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGCAGCAGCCGAGAAGGATAAAGGCGAGAGCAGACGAGAGCTGGCCAGGAGCAGAGTCCCCTGTTaGGATGGCCGTTTCTTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GRAAAEKDKGESRRELARSRVPC*DGRFLE Trigger: CTCCAAGAAACGGCCATCCCAACAGGGGACTCTGCT...CCTGGCCAGCTCTCGTCTGCTCTCGCCTTTATCCTTCTCGGCTGCTGCTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGAGCAGCAGCCGAGAAGGATAAAGGCGAGAGCAGACGAGAGCTGGCCAGGGGACACAGAACCTGGTaGGTCTGCGAACATGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GRAAAEKDKGESRRELARGHRTW*VCEHAL Trigger: GAGAGCATGTTCGCAGACCCACCAGGTTCTGTGTCC...CCTGGCCAGCTCTCGTCTGCTCTCGCCTTTATCCTTCTCGGCTGCTGCTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGGGACACAGAACCTGGTaGGTCTGCGAACATGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQGHRTW*VCEHAL Trigger: GAGAGCATGTTCGCAGACCCACCAGGTTCTGTGTCC...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCCTTTGGAGCTAATGTCCTTGCATCAGCTAGCACAGAACCCCTGAAGAGCTTGGGAGTGAGAGGCTaGCCTGGCACTGGAGCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: PAFGANVLASASTEPLKSLGVRG*PGTGAR Trigger: CCGGGCTCCAGTGCCAGGCCAGCCTCTCACTCCCAA...GCTCTTCAGGGGTTCTGTGCTAGCTGATGCAAGGACATTAGCTCCAAAGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGATGGGAGTAGGACTATaGCTTGGGAGTGAGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVMGVGL*LGSERL Trigger: CAGCCTCTCACTCCCAAGCCATAGTCCTACTCCCAT...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGCAGGAATGGTTGCTGTaGGGGTCCCATGCTTTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVQEWLL*GSHAFS Trigger: ACTAAAAGCATGGGACCCTCACAGCAACCATTCCTG...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | GATGCTGACACCTGGTCCGGTGGTCTACTGACTCCTGAAGACCAGTCTGCACTGTTCCTGGCTAGCACCTaGAGCCCTCAGCTCACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: DADTWSGGLLTPEDQSALFLAST*SPQLTL Trigger: CAAGGTGAGCTGAGGGCTGCAGGTGCTAGCCAGGAA...CAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCACCGGACCAGGTGTCAGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCCTTTGGAGCTAATGTCCTTGCATCAGCTAGCACAGAACCCCTGAAGAGCACTATGGCTTGGGAGTaGGAGGCTGGCCTGGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: PAFGANVLASASTEPLKSTMAWE*EAGLAL Trigger: CAGTGCCAGGCCAGCCTCTCACTCCCAAGCCATAGT...GCTCTTCAGGGGTTCTGTGCTAGCTGATGCAAGGACATTAGCTCCAAAGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGGCAGAAACTTCCACTCTGTaGCTGACATTGAAAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: LQGKQRWGRNSRPPRREAETSTL*LTLKAT Trigger: TGTTGCTTTCAATGTCAGTCACAGAGTGGAAGTTTC...TGCCTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTATCACCTGTAACCCCAGCACTCAGGGGGTGGAGGCAGGAGACCAGCTCACTTGGTCTGATTTCCTaGTCTGCGTGTGACCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: QLSPVTPALRGWRQETSSLGLIS*SACDLL Trigger: AAGCAGGTCACACGCAGAGCAGGAAATCAGACCAAG...TGAGCTGGTCTCCTGCCTCCACCCCCTGAGTGCTGGGGTTACAGGTGATAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | GATGCTGACACCTGGTCCGGTGGTCTACTGACTCCTGAAGACCAGTCTGCACTGCCGGGTACAGAGAAGTaGCCATGGCAGGCATTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: DADTWSGGLLTPEDQSALPGTEK*PWQAFL Trigger: CAAGAATGCCTGCCATGGGCACTTCTCTGTACCCGG...CAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCACCGGACCAGGTGTCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | GATGCTGACACCTGGTCCGGTGGTCTACTGACTCCTGAAGACCAGTCTGCACTGAGCAGAGTCCCCTGTTaGGATGGCCGTTTCTTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DADTWSGGLLTPEDQSALSRVPC*DGRFLE Trigger: CTCCAAGAAACGGCCATCCCAACAGGGGACTCTGCT...CAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCACCGGACCAGGTGTCAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | AGTACAACCGGGGAAAGTCCTTCTCCCAAGGCTCTGGAGAGGAAGAGCAGCAGCCCCCTACTGCACAACTaGGCACCCAGGACCATAGTT | + |
|
Preference number: 2 (lower is better) Translates to: STTGESPSPKALERKSSSPLLHN*APRTIV Trigger: AACTATGGTCCTGGGTGCCCAGTTGTGCAGTAGGGG...GCTGCTGCTCTTCCTCTCCAGAGCCTTGGGAGAAGGACTTTCCCCGGTTGTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGTGGGTCTGCGAACATGCTCTCATATTCCCAAACATGTCTGCAGCTGCTGGCTCTGCGTGTGACCTaGTTTTGTCCCACACGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PGGSANMLSYSQTCLQLLALRVT*FCPTRP Trigger: AGGGCGTGTGGGACAAAAGCAGGTCACACGCAGAGC...CAGCAGCTGCAGACATGTTTGGGAATATGAGAGCATGTTCGCAGACCCACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCCTTTGGAGCTAATGTCCTTGCATCAGCTAGCACAGAACCCCTGAAGAGCGAACTGAGCACGGGGTaGAGAGAGCTCTGGGTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PAFGANVLASASTEPLKSELSTG*RELWVL Trigger: CAAGACCCAGAGCTCTCTGCACCCCGTGCTCAGTTC...GCTCTTCAGGGGTTCTGTGCTAGCTGATGCAAGGACATTAGCTCCAAAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCACAGAGCTATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCATACCGGACGGGCACATaGACGCACACACACCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: RAQSYEDLTQSYNEKQEAYRTGT*THTHPH Trigger: GTGTGGGTGTGTGTGCGTGCATGTGCCCGTCCGGTA...TGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCATAGCTCTGTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | AGTACAACCGGGGAAAGTCCTTCTCCCAAGGCTCTGGAGAGGAAGAGCAGCAGCACAGAGAAGTGCCCATaGCAGGCATTCTTGCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: STTGESPSPKALERKSSSTEKCP*QAFLLE Trigger: CTCCAGCAAGAATGCCTGCCATGGGCACTTCTCTGT...GCTGCTGCTCTTCCTCTCCAGAGCCTTGGGAGAAGGACTTTCCCCGGTTGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGAGTGAGATAGGTCCCTaGTTGAACGAAGGCAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVSEIGP*LNEGKF Trigger: GAATTTGCCTTCGTTCAACCAGGGACCTATCTCACT...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | CTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGGCACTTGCATTGAACATTTaGATTTTCTTTGTACCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LQGKQRWGRNSRPPRREALALNI*IFFVPQ Trigger: CTGGGGTACAAAGAAAATGCAAATGTTCAATGCAAG...TGCCTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | CTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGGCAAGAAGACAAATGACTTaGGTTGAGTCCTTATCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LQGKQRWGRNSRPPRREARRQMT*VESLSF Trigger: GAAAGATAAGGACTCAACCCAAGTCATTTGTCTTCT...TGCCTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | GCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGCGATCAATGAGGCTGGGGAAATaGCATGTGTTTGTCACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: AITCNPSTQEVEAGDQRSMRLGK*HVFVTE Trigger: TTCTGTGACAAACACATGCCATTTCCCCAGCCTCAT...TGATCGCTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGAGAGAGGAGTTGATATaGCATCTTTGTGGCAGACTG | + |
|
Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQREELI*HLCGRL Trigger: CAGTCTGCCACAAAGATGCCATATCAACTCCTCTCT...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | AGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGAGTGAGATAGGTCCCTaGTTGAACGAAGGCAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: RPAITCNPSTQEVEAGDQSEIGP*LNEGKF Trigger: GAATTTGCCTTCGTTCAACCAGGGACCTATCTCACT...CTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCATTTGGCAAATCAACAACCACCTGGGAACTaGGCACGGGGTGCAGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: MRTSLSPITRSRRHLANQQPPGN*ARGAES Trigger: GCTCTCTGCACCCCGTGCTCAGTTCCCAGGTGGTTG...TTGATTTGCCAAATGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGAGGAAAGAAGACAAATaGCTTGGGTTGAGTCCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: GGGGRRPAITCNPSTQEVRKEDK*LGLSPY Trigger: ATAAGGACTCAACCCAAGTCATTTGTCTTCTTTCCT...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | AGAGCACAGAGCTATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCACCTCAGGCCCAGGACTaGAGCTCGGGCGAATATAAA | + |
|
Preference number: 2 (lower is better) Translates to: RAQSYEDLTQSYNEKQEAPQAQD*SSGEYK Trigger: TTTATATTCGCCCGAGCTCCAGTCCTGGGCCTGAGG...TGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCATAGCTCTGTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGAGCAGCAGCCGAGAAGGATAAAGGCGAGAGCAGACGAGAGCTGGCCAGGACAAATGACTTGGGTTaGGTCCTTATCTTTCAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GRAAAEKDKGESRRELARTNDLG*VLIFQL Trigger: AAGCTGAAAGATAAGGACTCAACCCAAGTCATTTGT...CCTGGCCAGCTCTCGTCTGCTCTCGCCTTTATCCTTCTCGGCTGCTGCTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | CCGTGGTTTGGAAATTCATCAAACCGTGTGTGTGTGTGTGTGTGTAGGGGAGAAGCTCTGCGTGTGACCTaGTTTTGTCCCACACGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PWFGNSSNRVCVCVCRGEALRVT*FCPTRP Trigger: AGGGCGTGTGGGACAAAAGCAGGTCACACGCAGAGC...TTCTCCCCTACACACACACACACACACACGGTTTGATGAATTTCCAAACCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | AACATGCTCTCATATTCCCAAACATGTCTGCAGCTGCTGGCTAGGTTTCTGTGTTACCGGACGGGCACATaGACGCACACACACCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: NMLSYSQTCLQLLARFLCYRTGT*THTHPH Trigger: GTGTGGGTGTGTGTGCGTGCATGTGCCCGTCCGGTA...ACACAGAAACCTAGCCAGCAGCTGCAGACATGTTTGGGAATATGAGAGCATGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | GATGCTGACACCTGGTCCGGTGGTCTACTGACTCCTGAAGACCAGTCTGCACTGAGAGAGGAGTTGATATaGCATCTTTGTGGCAGACTG | + |
|
Preference number: 2 (lower is better) Translates to: DADTWSGGLLTPEDQSALREELI*HLCGRL Trigger: CAGTCTGCCACAAAGATGCCATATCAACTCCTCTCT...CAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCACCGGACCAGGTGTCAGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CAA 90 bp | GCACTGGCTCCTCTCACTTGCCCTCCTCTCCTCCCCAGTATCACTTaGCTTCTAAAACATGGAACTAGCACAGGGATAGCAAGAGACAAC | + |
|
Preference number: 2 (lower is better) Translates to: ALAPLTCPPLLPSIT*LLKHGTSTGIARDN Trigger: GTTGTCTCTTGCTATCCCTGTGCTAGTTCCATGTTTTAGAAGCAAAGTGATACTGGGGAGGAGAGGAGGGCAAGTGAGAGGAGCCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCCTTTGGAGCTAATGTCCTTGCATCAGCTAGCACAGAACCCCTGAAGAGCAGAACCTGGTGGGTCTaGGAACATGCTCTCATATTC | + |
|
Preference number: 2 (lower is better) Translates to: PAFGANVLASASTEPLKSRTWWV*EHALIF Trigger: GAATATGAGAGCATGTTCGCAGACCCACCAGGTTCT...GCTCTTCAGGGGTTCTGTGCTAGCTGATGCAAGGACATTAGCTCCAAAGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCCTTTGGAGCTAATGTCCTTGCATCAGCTAGCACAGAACCCCTGAAGAGCCATGTCTGCAGCTGCTaGCTAGGTTTCTGTGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PAFGANVLASASTEPLKSHVCSC*LGFCVF Trigger: GAAAACACAGAAACCTAGCCAGCAGCTGCAGACATG...GCTCTTCAGGGGTTCTGTGCTAGCTGATGCAAGGACATTAGCTCCAAAGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | AGAGCACAGAGCTATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCACCTGAAGAGCACTTTTaGGATCTACACGCAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RAQSYEDLTQSYNEKQEAPEEHF*DLHARR Trigger: TCTCCTTGCGTGTAGATCCCAAAAGTGCTCTTCAGG...TGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCATAGCTCTGTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | ATACAAAAATCTTTGGGAGGGAGTGAGATAGGTCCCTGGTTGAACGAAGGCAAATGGTCTACTGACTCCTaGAGACCAGTCTGCACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: IQKSLGGSEIGPWLNEGKWSTDS*RPVCTG Trigger: CCCAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCA...TTTGCCTTCGTTCAACCAGGGACCTATCTCACTCCCTCCCAAAGATTTTTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCATTTGGCAAATCAAACAGAGAAGTGCCCATaGCAGGCATTCTTGCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: MRTSLSPITRSRRHLANQTEKCP*QAFLLE Trigger: CTCCAGCAAGAATGCCTGCCATGGGCACTTCTCTGT...TTGATTTGCCAAATGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CAA 90 bp | GTTTCATGGAGAAGTAACAGGGCTCCCATGAAGCCACACTGGGCTTaGGTCACATGGAGAACCAAGAAGCCAGAAAGGGACCTTAAAATT | + |
|
Preference number: 2 (lower is better) Translates to: VSWRSNRAPMKPHWA*VTWRTKKPERDLKI Trigger: AATTTTAAGGTCCCTTTCTGGCTTCTTGGTTCTCCATGTGACCAAAGCCCAGTGTGGCTTCATGGGAGCCCTGTTACTTCTCCATGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | CCGTGGTTTGGAAATTCATCAAACCGTGTGTGTGTGTGTGTGTGTAGGGGAGAAGAAAATATTGACTCCTaGGTGGGAGGTACCACACCT | + |
|
Preference number: 2 (lower is better) Translates to: PWFGNSSNRVCVCVCRGEENIDS*VGGTTP Trigger: AGGTGTGGTACCTCCCACTCAGGAGTCAATATTTTC...TTCTCCCCTACACACACACACACACACACGGTTTGATGAATTTCCAAACCACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | CCGTGGTTTGGAAATTCATCAAACCGTGTGTGTGTGTGTGTGTGTAGGGGAGAACCTGAAGAGCACTTTTaGGATCTACACGCAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PWFGNSSNRVCVCVCRGEPEEHF*DLHARR Trigger: TCTCCTTGCGTGTAGATCCCAAAAGTGCTCTTCAGG...TTCTCCCCTACACACACACACACACACACGGTTTGATGAATTTCCAAACCACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | CCGTGGTTTGGAAATTCATCAAACCGTGTGTGTGTGTGTGTGTGTAGGGGAGAAGGTAGCTTTCCACTTTaGGGAAACTTCCACTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PWFGNSSNRVCVCVCRGEGSFPL*GNFHSV Trigger: CACAGAGTGGAAGTTTCCCCAAAGTGGAAAGCTACC...TTCTCCCCTACACACACACACACACACACGGTTTGATGAATTTCCAAACCACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCATTTGGCAAATCAAAGAACCTGGTGGGTCTaGGAACATGCTCTCATATTC | + |
|
Preference number: 2 (lower is better) Translates to: MRTSLSPITRSRRHLANQRTWWV*EHALIF Trigger: GAATATGAGAGCATGTTCGCAGACCCACCAGGTTCT...TTGATTTGCCAAATGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | CCGTGGTTTGGAAATTCATCAAACCGTGTGTGTGTGTGTGTGTGTAGGGGAGAAGAAACTTCCACTCTGTaGCTGACATTGAAAGCAACA | + |
|
Preference number: 2 (lower is better) Translates to: PWFGNSSNRVCVCVCRGEETSTL*LTLKAT Trigger: TGTTGCTTTCAATGTCAGTCACAGAGTGGAAGTTTC...TTCTCCCCTACACACACACACACACACACGGTTTGATGAATTTCCAAACCACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR TCA 90 bp | ATACAAAAATCTTTGGGAGGGAGTGAGATAGGTCCCTGGTTGAACGAAGGCAAAGAAAATATTGACTCCTaGGTGGGAGGTACCACACCT | + |
|
Preference number: 2 (lower is better) Translates to: IQKSLGGSEIGPWLNEGKENIDS*VGGTTP Trigger: AGGTGTGGTACCTCCCACTCAGGAGTCAATATTTTC...TTTGCCTTCGTTCAACCAGGGACCTATCTCACTCCCTCCCAAAGATTTTTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCACAGAGCTATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCACTTGCATTGAACATTTaGATTTTCTTTGTACCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RAQSYEDLTQSYNEKQEALALNI*IFFVPQ Trigger: CTGGGGTACAAAGAAAATGCAAATGTTCAATGCAAG...TGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCATAGCTCTGTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | ATACAAAAATCTTTGGGAGGGAGTGAGATAGGTCCCTGGTTGAACGAAGGCAAACATGTCTGCAGCTGCTaGCTAGGTTTCTGTGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: IQKSLGGSEIGPWLNEGKHVCSC*LGFCVF Trigger: GAAAACACAGAAACCTAGCCAGCAGCTGCAGACATG...TTTGCCTTCGTTCAACCAGGGACCTATCTCACTCCCTCCCAAAGATTTTTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | ATACAAAAATCTTTGGGAGGGAGTGAGATAGGTCCCTGGTTGAACGAAGGCAAATGGGCTTTGGTCACATaGAGAACCAAGAAGCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: IQKSLGGSEIGPWLNEGKWALVT*RTKKPE Trigger: TTCTGGCTTCTTGGTTCTCCATGTGACCAAAGCCCA...TTTGCCTTCGTTCAACCAGGGACCTATCTCACTCCCTCCCAAAGATTTTTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CAA 90 bp | GCTATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCATTaGGCAAATCAAGTAAGAGCAACACTTGGGACAACCAATCAATTA | + |
|
Preference number: 2 (lower is better) Translates to: AMRTSLSPITRSRRH*ANQVRATLGTTNQL Trigger: TAATTGATTGGTTGTCCCAAGTGTTGCTCTTACTTGATTTGCCAAATGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCATTTGGCAAATCAAAGGAGACAGACATCTTaGATTGAACATTTGCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: MRTSLSPITRSRRHLANQRRQTS*IEHLHF Trigger: AAAATGCAAATGTTCAATGCAAGATGTCTGTCTCCT...TTGATTTGCCAAATGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | ATACAAAAATCTTTGGGAGGGAGTGAGATAGGTCCCTGGTTGAACGAAGGCAAAAGAAGACAAATGACTTaGGTTGAGTCCTTATCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: IQKSLGGSEIGPWLNEGKRRQMT*VESLSF Trigger: GAAAGATAAGGACTCAACCCAAGTCATTTGTCTTCT...TTTGCCTTCGTTCAACCAGGGACCTATCTCACTCCCTCCCAAAGATTTTTGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CCA 90 bp | ATACAAAAATCTTTGGGAGGGAGTGAGATAGGTCCCTGGTTGAACGAAGGCAAAAGTAAGAGCAACACTTaGGACAACCAATCAATTAAG | + |
|
Preference number: 2 (lower is better) Translates to: IQKSLGGSEIGPWLNEGKSKSNT*DNQSIK Trigger: CTTAATTGATTGGTTGTCCCAAGTGTTGCTCTTACT...TTTGCCTTCGTTCAACCAGGGACCTATCTCACTCCCTCCCAAAGATTTTTGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | CCACAAACGCTGGCCGGCCTCCAGGGGAAGCAGAGATaGGGTAGGAACTCCCGCCCACCTCGGAGGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PQTLAGLQGKQR*GRNSRPPRREA Trigger: TGCCTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAGGCCGGCCAGCGTTTGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGCCATGGCAGGCATTCTaGCTGGAGCCAGGTGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GLQGKQRWGRNSRPPRREPWQAF*LEPGVA Trigger: GGCTACACCTGGCTCCAGCAAGAATGCCTGCCATGG...CTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | ACTCCTGAAGACCAGTCTGCACTGGGGCAGGCGGGCTaGTGGCAGTGGAGCAAGGGCTTCAGGAGGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: TPEDQSALGQAG*WQWSKGFRRHW Trigger: CCAGTGCCTCCTGAAGCCCTTGCTCCACTGCCACCAGCCCGCCTGCCCCAGTGCAGACTGGTCTTCAGGAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGGCAAGCCCTCCCCAGCCTTaGGAGCTAATGTCCTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LQGKQRWGRNSRPPRREASPPQP*ELMSLH Trigger: ATGCAAGGACATTAGCTCCAAAGGCTGGGGAGGGCT...TGCCTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR GCA 72 bp | AGGCTGGCCTGGCACTGGAGCCCGGGTACAGAGAAGTaGCCATGGCAGGCATTCTTGCTGGAGCCAGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RLAWHWSPGTEK*PWQAFLLEPGV Trigger: TACACCTGGCTCCAGCAAGAATGCCTGCCATGGGCACTTCTCTGTACCCGGGCTCCAGTGCCAGGCCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | GTGGGAGGTACCACACCTGAACCAACCCACAAACGCTaGCCGGCCTCCAGGGGAAGCAGAGATGGGGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VGGTTPEPTHKR*PASRGSRDGVG Trigger: TCCTACCCCATCTCTGCTTCCCCTGGAGGCCGGCCAGCGTTTGTGGGTTGGTTCAGGTGTGGTACCTCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTATCACCTGTAACCCCAGCACTCAGGGGGTGGAGGCAGGAGACCAGCTCAGCCTCTCCCTTCTCCTaGGCACAGGTCTTGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QLSPVTPALRGWRQETSSASPFS*AQVLML Trigger: CAGCATCAAGACCTGTGCCAAGGAGAAGGGAGAGGC...TGAGCTGGTCTCCTGCCTCCACCCCCTGAGTGCTGGGGTTACAGGTGATAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR GCA 72 bp | GGGGTGCAGAGAGCTCTGGGTCTTGGTCTGATTTCCTaGTCTGCGTGTGACCTGCTTTTGTCCCACACGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GVQRALGLGLIS*SACDLLLSHTP Trigger: GGGCGTGTGGGACAAAAGCAGGTCACACGCAGAGCAGGAAATCAGACCAAGACCCAGAGCTCTCTGCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR GCA 72 bp | CTCCATAGCCTCGGGCCCAGGAAGAAGTCTGCAGAGTaGTGGAGGAATGCCAGCCAGTCTCCACTCACACCA | + |
|
Preference number: 3 (lower is better) Translates to: LHSLGPRKKSAE*WRNASQSPLTP Trigger: TGGTGTGAGTGGAGACTGGCTGGCATTCCTCCAGCACTCTGCAGACTTCTTCCTGGGCCCGAGGCTATGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR GCA 72 bp | AGCCACAGTCAAGCTCCCATGTTCCTGGCTAGCACCTaGAGCCCTCAGCTCACCTTGGGAGGACCCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHSQAPMFLAST*SPQLTLGGPYR Trigger: TCTGTAGGGTCCTCCCAAGGTGAGCTGAGGGCTGCAGGTGCTAGCCAGGAACATGGGAGCTTGACTGTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | TCTGGACCTGAAGCCACAGTCAAGCTCCCATGTTCCTaGCTAGCACCTGCAGCCCTCAGCTCACCTTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGPEATVKLPCS*LAPAALSSPWE Trigger: CTCCCAAGGTGAGCTGAGGGCTGCAGGTGCTAGCCAGGAACATGGGAGCTTGACTGTGGCTTCAGGTCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGGCAACATTTGCATTTTCTTaGTACCCCAGCGCTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LQGKQRWGRNSRPPRREATFAFS*YPSASH Trigger: GTGGGAAGCGCTGGGGTACAAAGAAAATGCAAATGT...TGCCTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR TCA 72 bp | CTGAGCACGGGGTGCAGAGAGCTCTGGGTCTTGGTCTaGTTTCCTGCTCTGCGTGTGACCTGCTTTTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSTGCRELWVLV*FPALRVTCFCP Trigger: GGGACAAAAGCAGGTCACACGCAGAGCAGGAAATCAGACCAAGACCCAGAGCTCTCTGCACCCCGTGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR GCA 72 bp | AAGAGGGACTGGGGATGTAGCTTAGTTGGGAGTGTGTaGCTGACATGCACGAAGCCCTGGGTTGTCCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KRDWGCSLVGSV*LTCTKPWVVPS Trigger: GCTGGGGACAACCCAGGGCTTCGTGCATGTCAGGCACACACTCCCAACTAAGCTACATCCCCAGTCCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | AGAGAGAAGACCTCCTTTCCCATGGGAGTAGGACTATaGCTTGGGAGTGAGAGGCTGGCCTGGCACTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: REKTSFPMGVGL*LGSERLAWHWS Trigger: GCTCCAGTGCCAGGCCAGCCTCTCACTCCCAAGCCATAGTCCTACTCCCATGGGAAAGGAGGTCTTCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | GACCAGCTATCACCTGTAACCCCAGCACTCAGGGGGTaGAGGCAGGAGACCAGCTCAAGATCACTCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DQLSPVTPALRG*RQETSSRSLLA Trigger: AGCCAAGAGTGATCTTGAGCTGGTCTCCTGCCTCCACCCCCTGAGTGCTGGGGTTACAGGTGATAGCTGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | TTAGTTGGGAGTGTGTGCCTGACATGCACGAAGCCCTaGGTTGTCCCCAGCACCTCACAAGCCAGCAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVGSVCLTCTKP*VVPSTSQASKV Trigger: CACCTTGCTGGCTTGTGAGGTGCTGGGGACAACCCAGGGCTTCGTGCATGTCAGGCACACACTCCCAACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR TCA 72 bp | AGCTCTGGGTCTTGGTCTGATTTCCTGCTCTGCGTGTaGCCTGCTTTTGTCCCACACGCCCTGGCTACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSGSWSDFLLCV*PAFVPHALATC Trigger: GCAAGTAGCCAGGGCGTGTGGGACAAAAGCAGGTCACACGCAGAGCAGGAAATCAGACCAAGACCCAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR GCA 72 bp | ACACACTGGATGCAGGACAGCACAAACAGGCCACACTaGCAAGAGGCCTCTGAACAGAGCAGGTCATGGACC | + |
|
Preference number: 3 (lower is better) Translates to: THWMQDSTNRPH*QEASEQSRSWT Trigger: GGTCCATGACCTGCTCTGTTCAGAGGCCTCTTGGCAGTGTGGCCTGTTTGTGCTGTCCTGCATCCAGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | GCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGCGATCAACATTTGCATTTTCTTaGTACCCCAGCGCTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AITCNPSTQEVEAGDQRSTFAFS*YPSASH Trigger: GTGGGAAGCGCTGGGGTACAAAGAAAATGCAAATGT...TGATCGCTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGAGAAGCAGGAGGCATTaGGCAAATCAAGTAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GGGGRRPAITCNPSTQEVRSRRH*ANQVRA Trigger: TGCTCTTACTTGATTTGCCAAATGCCTCCTGCTTCT...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTGACACCTGGTCCGGTGGTCTACTGACTCCTGAAGACCAGTCTGCACTGAAGCCACACTGGGCTTaGGTCACATGGAGAACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DADTWSGGLLTPEDQSALKPHWA*VTWRTK Trigger: CTTGGTTCTCCATGTGACCAAAGCCCAGTGTGGCTT...CAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCACCGGACCAGGTGTCAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | GTCCTTATCTTTCAGCTTCTCCCCCTACTGCACAACTaGGCACCCAGGACCATAGTTTACCGGACGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VLIFQLLPLLHN*APRTIVYRTGT Trigger: TGTGCCCGTCCGGTAAACTATGGTCCTGGGTGCCCAGTTGTGCAGTAGGGGGAGAAGCTGAAAGATAAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | CATCTTTGTGGCAGACTGCAGGTGGTAAGAGGACTCTaGTGGCAGTCAGGCCTAGAGAGCTGGGGTTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: HLCGRLQVVRGL*WQSGLESWGFM Trigger: CATGAAACCCCAGCTCTCTAGGCCTGACTGCCACCAGAGTCCTCTTACCACCTGCAGTCTGCCACAAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | CCACACTGCCAAGAGGCCTCTGAACAGAGCAGGTCATaGACCTATAAGGGACCCATCTCCCAGGAATGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PHCQEASEQSRS*TYKGPISQEWL Trigger: CAACCATTCCTGGGAGATGGGTCCCTTATAGGTCCATGACCTGCTCTGTTCAGAGGCCTCTTGGCAGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR GCA 72 bp | GCCCATAGGACACAGAACCTGGTGGGTCTGCGAACATaGTCTCATATTCCCAAACATGTCTGCAGCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AHRTQNLVGLRT*SHIPKHVCSCW Trigger: CCAGCAGCTGCAGACATGTTTGGGAATATGAGAGCATGTTCGCAGACCCACCAGGTTCTGTGTCCTATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR GCA 72 bp | CTGACATTGAAAGCAACAGGGCTGAGAGCTCAGAGCTaGCCAGAGCACAGAGCTATGAGGACCTCACTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LTLKATGLRAQS*PEHRAMRTSLS Trigger: ACTGAGTGAGGTCCTCATAGCTCTGTGCTCTGGGCAGCTCTGAGCTCTCAGCCCTGTTGCTTTCAATGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTGGGTCTGCGAACATGCTCTCATATTCCCAAACATGTCTGCAGCTGCTGTCCTTGGCACAGGTCTaGATGCTGAGGGAAAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PGGSANMLSYSQTCLQLLSLAQV*MLRESH Trigger: ATGGCTTTCCCTCAGCATCAAGACCTGTGCCAAGGA...CAGCAGCTGCAGACATGTTTGGGAATATGAGAGCATGTTCGCAGACCCACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTGACACCTGGTCCGGTGGTCTACTGACTCCTGAAGACCAGTCTGCACTGTTGGGAAGAGAGGAGTaGATATGGCATCTTTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DADTWSGGLLTPEDQSALLGREE*IWHLCG Trigger: GCCACAAAGATGCCATATCAACTCCTCTCTTCCCAA...CAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCACCGGACCAGGTGTCAGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR TCA 72 bp | AGCTCACCTTGGGAGGACCCTACAGACACCAGCAAATaGGGCTGGGGAAATGGCATGTGTTTGTCACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSPWEDPTDTSK*GWGNGMCLSQK Trigger: CTTCTGTGACAAACACATGCCATTTCCCCAGCCTCATTTGCTGGTGTCTGTAGGGTCCTCCCAAGGTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | CCGTGGTTTGGAAATTCATCAAACCGTGTGTGTGTGTGTGTGTGTAGGGGAGAAGCCTCTCCCTTCTCCTaGGCACAGGTCTTGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PWFGNSSNRVCVCVCRGEASPFS*AQVLML Trigger: CAGCATCAAGACCTGTGCCAAGGAGAAGGGAGAGGC...TTCTCCCCTACACACACACACACACACACGGTTTGATGAATTTCCAAACCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTATCACCTGTAACCCCAGCACTCAGGGGGTGGAGGCAGGAGACCAGCTCAAGATCCTGTTTAGTTTaGGGAAGAGAGGAGTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: QLSPVTPALRGWRQETSSRSCLV*GREELI Trigger: TATCAACTCCTCTCTTCCCAAAACTAAACAGGATCT...TGAGCTGGTCTCCTGCCTCCACCCCCTGAGTGCTGGGGTTACAGGTGATAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTATCACCTGTAACCCCAGCACTCAGGGGGTGGAGGCAGGAGACCAGCTCATCTTGCATTGAACATTaGCATTTTCTTTGTACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QLSPVTPALRGWRQETSSSCIEH*HFLCTP Trigger: TGGGGTACAAAGAAAATGCAAATGTTCAATGCAAGA...TGAGCTGGTCTCCTGCCTCCACCCCCTGAGTGCTGGGGTTACAGGTGATAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | GCGATCACCTGTAACCCCAGCACTCAGGAGGTGGAGGCAGGAGACCAGCGATCAATTATACAAAAATCTTaGGGAGGGAGTGAGATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AITCNPSTQEVEAGDQRSIIQKS*GGSEIG Trigger: ACCTATCTCACTCCCTCCCAAAGATTTTTGTATAAT...TGATCGCTGGTCTCCTGCCTCCACCTCCTGAGTGCTGGGGTTACAGGTGATCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | GGACCCTACAGACACCAGCAAATGAGGCTGGGGAAATaGCATGTGTTTGTCACAGAAGTGAAAGCCAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GPYRHQQMRLGK*HVFVTEVKAKA Trigger: AGCCTTGGCTTTCACTTCTGTGACAAACACATGCCATTTCCCCAGCCTCATTTGCTGGTGTCTGTAGGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR TCA 72 bp | GAGCTAATGTCCTTGCATCAGCTAGCACAGAACCCCTaGAGAGCACTTTTGGGATCTACACGCAAGGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: ELMSLHQLAQNP*RALLGSTRKET Trigger: TGTCTCCTTGCGTGTAGATCCCAAAAGTGCTCTTCAGGGGTTCTGTGCTAGCTGATGCAAGGACATTAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR CCA 72 bp | AGTTTTGGGAAGAGAGGAGTTGATATGGCATCTTTGTaGCAGACTGCAGGTGGTAAGAGGACTCTGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SFGKRGVDMASL*QTAGGKRTLVA Trigger: TGCCACCAGAGTCCTCTTACCACCTGCAGTCTGCCACAAAGATGCCATATCAACTCCTCTCTTCCCAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCTCATATTCCCAAACATGTCTGCAGCTGCTGGCTAGGTTTCTGTGTTTTCTCCTTGGCACAGGTCTaGATGCTGAGGGAAAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CSHIPKHVCSCWLGFCVFSLAQV*MLRESH Trigger: ATGGCTTTCCCTCAGCATCAAGACCTGTGCCAAGGA...GAAAACACAGAAACCTAGCCAGCAGCTGCAGACATGTTTGGGAATATGAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR GCA 72 bp | CATGGACCTATAAGGGACCCATCTCCCAGGAATGGTTaGTGTGAGGGTCCCATGCTTTTAGTACAAAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HGPIRDPSPRNG*CEGPMLLVQSF Trigger: AAAGCTTTGTACTAAAAGCATGGGACCCTCACAGCAACCATTCCTGGGAGATGGGTCCCTTATAGGTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
||
| 3UTR TCA 72 bp | TTGGGATCTACACGCAAGGAGACAGACATCTTGCATTaGACATTTGCATTTTCTTTGTACCCCAGCGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGSTRKETDILH*TFAFSLYPSAS Trigger: GGAAGCGCTGGGGTACAAAGAAAATGCAAATGTTCAATGCAAGATGTCTGTCTCCTTGCGTGTAGATCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CCA 72 bp | AGATCCTGTTTAGTTTTGGGAAGAGAGGAGTTGATATaGCATCTTTGTGGCAGACTGCAGGTGGTAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RSCLVLGREELI*HLCGRLQVVRG Trigger: TCCTCTTACCACCTGCAGTCTGCCACAAAGATGCCATATCAACTCCTCTCTTCCCAAAACTAAACAGGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CCA 72 bp | CAGGAGGCATTTGGCAAATCAAGTAAGAGCAACACTTaGGACAACCAATCAATTAAGTACAACCGGGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QEAFGKSSKSNT*DNQSIKYNRGK Trigger: CTTTCCCCGGTTGTACTTAATTGATTGGTTGTCCCAAGTGTTGCTCTTACTTGATTTGCCAAATGCCTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| CDS-3UTR TCA 90 bp | AGTACAACCGGGGAAAGTCCTTCTCCCAAGGCTCTGGAGAGGAAGAGCAGCAGCAGCACAAGAGGGCCTTaGAGATGCTGCGGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: STTGESPSPKALERKSSSSTRGP*RCCGHG Trigger: CCCGTGGCCGCAGCATCTTCAAGGCCCTCTTGTGCT...GCTGCTGCTCTTCCTCTCCAGAGCCTTGGGAGAAGGACTTTCCCCGGTTGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | GGGCATCCAAAGCAGCCTCCGGCCTCTCCCTTCTCCTaGGCACAGGTCTTGATGCTGAGGGAAAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHPKQPPASPFS*AQVLMLRESHG Trigger: ACCATGGCTTTCCCTCAGCATCAAGACCTGTGCCAAGGAGAAGGGAGAGGCCGGAGGCTGCTTTGGATGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| CDS-3UTR TCA 90 bp | GATGCTGACACCTGGTCCGGTGGTCTACTGACTCCTGAAGACCAGTCTGCACTGCCTCCTCCTTGTGTGTaGGCTCAGTGGAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DADTWSGGLLTPEDQSALPPPCV*AQWKSW Trigger: CCAGCTCTTCCACTGAGCTCACACACAAGGAGGAGG...CAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCACCGGACCAGGTGTCAGCATC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR GCA 90 bp | GGAGGTGGAGGCAGGAGACCAGCGATCACCTGTAACCCCAGCACTCAGGAGGTGAGCACATATACCTGGTaGGTGGTCCCCTCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGGRRPAITCNPSTQEVSTYTW*VVPSIS Trigger: AGAGATTGAGGGGACCACGCACCAGGTATATGTGCT...CACCTCCTGAGTGCTGGGGTTACAGGTGATCGCTGGTCTCCTGCCTCCACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | AGCCCGGGTACAGAGAAGTGCCCATGGCAGGCATTCTaGCTGGAGCCAGGTGTAGCCCATAGGACACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPGTEKCPWQAF*LEPGVAHRTQN Trigger: GTTCTGTGTCCTATGGGCTACACCTGGCTCCAGCAAGAATGCCTGCCATGGGCACTTCTCTGTACCCGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | ATGTTCCTGGCTAGCACCTGCAGCCCTCAGCTCACCTaGGGAGGACCCTACAGACACCAGCAAATGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MFLASTCSPQLT*GGPYRHQQMRL Trigger: CAGCCTCATTTGCTGGTGTCTGTAGGGTCCTCCCAAGGTGAGCTGAGGGCTGCAGGTGCTAGCCAGGAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| CDS-3UTR TCA 90 bp | CACAGAAGTGAAAGCCAAGGCTCCATAGCCTCGGGCCCAGGAAGAAGTCTGCAGCGACGTAAGGCCTCTTaGGCACATATACCTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: HRSESQGSIASGPGRSLQRRKAS*AHIPGA Trigger: CGCACCAGGTATATGTGCTCAAGAGGCCTTACGTCG...CTGCAGACTTCTTCCTGGGCCCGAGGCTATGGAGCCTTGGCTTTCACTTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR GCA 90 bp | TGGGCACCCAGGACCATAGTTTACCGGACGGGCACATGCACGCACACACACCCACTGGACTGGACAACATaGTGTGTGTGGAAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WAPRTIVYRTGTCTHTHPLDWTT*CVWKQH Trigger: GTGCTGTTTCCACACACAGCATGTTGTCCAGTCCAG...TGGGTGTGTGTGCGTGCATGTGCCCGTCCGGTAAACTATGGTCCTGGGTGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR CCA 90 bp | CAGCTATCACCTGTAACCCCAGCACTCAGGGGGTGGAGGCAGGAGACCAGCTCAACAACATGCTGTGTGTaGAAACAGCACAAGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLSPVTPALRGWRQETSSTTCCV*KQHKRA Trigger: GGCCCTCTTGTGCTGTTTCCACACACAGCATGTTGT...TGAGCTGGTCTCCTGCCTCCACCCCCTGAGTGCTGGGGTTACAGGTGATAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR CCA 90 bp | CTACTGCACAACTGGGCACCCAGGACCATAGTTTACCGGACGGGCACATGCACGGTGGAAGAGCTGGACTaGACAACATGCTGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHNWAPRTIVYRTGTCTVEELD*TTCCVW Trigger: CCACACACAGCATGTTGTCCAGTCCAGCTCTTCCAC...CGTGCATGTGCCCGTCCGGTAAACTATGGTCCTGGGTGCCCAGTTGTGCAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR CCA 90 bp | CAGCTATCACCTGTAACCCCAGCACTCAGGGGGTGGAGGCAGGAGACCAGCTCACATATACCTGGTGCGTaGTCCCCTCAATCTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: QLSPVTPALRGWRQETSSHIPGA*SPQSLQ Trigger: CTGTAGAGATTGAGGGGACCACGCACCAGGTATATG...TGAGCTGGTCTCCTGCCTCCACCCCCTGAGTGCTGGGGTTACAGGTGATAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR CCA 90 bp | GATGCTGACACCTGGTCCGGTGGTCTACTGACTCCTGAAGACCAGTCTGCACTGGCTCAGTGGAAGAGCTaGACTGGACAACATGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DADTWSGGLLTPEDQSALAQWKS*TGQHAV Trigger: CACAGCATGTTGTCCAGTCCAGCTCTTCCACTGAGC...CAGTGCAGACTGGTCTTCAGGAGTCAGTAGACCACCGGACCAGGTGTCAGCATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR CCA 90 bp | AGTACAACCGGGGAAAGTCCTTCTCCCAAGGCTCTGGAGAGGAAGAGCAGCAGCGCAGCTGCCCAAGGCTaGTGTAGACATCATCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: STTGESPSPKALERKSSSAAAQG*CRHHQF Trigger: GAACTGATGATGTCTACACCAGCCTTGGGCAGCTGC...GCTGCTGCTCTTCCTCTCCAGAGCCTTGGGAGAAGGACTTTCCCCGGTTGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | GAAGACACAGAGGGAGAGCCAAGCCCTCCCCAGCCTTaGGAGCTAATGTCCTTGCATCAGCTAGCACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EDTEGEPSPPQP*ELMSLHQLAQN Trigger: GTTCTGTGCTAGCTGATGCAAGGACATTAGCTCCAAAGGCTGGGGAGGGCTTGGCTCTCCCTCTGTGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | AGAAGTAACAGGGCTCCCATGAAGCCACACTGGGCTTaGGTCACATGGAGAACCAAGAAGCCAGAAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSNRAPMKPHWA*VTWRTKKPERD Trigger: GTCCCTTTCTGGCTTCTTGGTTCTCCATGTGACCAAAGCCCAGTGTGGCTTCATGGGAGCCCTGTTACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| CDS-3UTR GCA 90 bp | ATGAGGACCTCACTCAGTCCTATAACGAGAAGCAGGAGGCATTTGGCAAATCAATTGGAGACTAGGCCTTaGTTGGTGAGCACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MRTSLSPITRSRRHLANQLETRP*LVSTRA Trigger: CGCCCTGGTGCTCACCAAGCAAGGCCTAGTCTCCAA...TTGATTTGCCAAATGCCTCCTGCTTCTCGTTATAGGACTGAGTGAGGTCCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | CCTCTCACTTGCCCTCCTCTCCTCCCCAGTATCACTTaGCTTCTAAAACATGGAACTAGCACAGGGATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLTCPPLLPSIT*LLKHGTSTGIA Trigger: TGCTATCCCTGTGCTAGTTCCATGTTTTAGAAGCAAAGTGATACTGGGGAGGAGAGGAGGGCAAGTGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | TTTAGTTTTGGGAAGAGAGGAGTTGATATGGCATCTTaGTGGCAGACTGCAGGTGGTAAGAGGACTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSFGKRGVDMAS*WQTAGGKRTLV Trigger: CACCAGAGTCCTCTTACCACCTGCAGTCTGCCACAAAGATGCCATATCAACTCCTCTCTTCCCAAAACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | CTGACTCCGTGCCACCATGATAGATCCTGTTTAGTTTaGGGAAGAGAGGAGTTGATATGGCATCTTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTPCHHDRSCLV*GREELIWHLCG Trigger: GCCACAAAGATGCCATATCAACTCCTCTCTTCCCAAAACTAAACAGGATCTATCATGGTGGCACGGAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | CTACACGCAAGGAGACAGACATCTTGCATTGAACATTaGCATTTTCTTTGTACCCCAGCGCTTCCCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: LHARRQTSCIEH*HFLCTPALPTQ Trigger: TTGTGTGGGAAGCGCTGGGGTACAAAGAAAATGCAAATGTTCAATGCAAGATGTCTGTCTCCTTGCGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | TTTGGGATCTACACGCAAGGAGACAGACATCTTGCATaGAACATTTGCATTTTCTTTGTACCCCAGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGIYTQGDRHLA*NICIFFVPQRF Trigger: GAAGCGCTGGGGTACAAAGAAAATGCAAATGTTCAATGCAAGATGTCTGTCTCCTTGCGTGTAGATCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | AGGGACCTTAAAATTCAATCAACTCTGAGGCTCTTATaGCTTAGTCAAGACCAGCCCTCAGAGCTTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDLKIQSTLRLL*LSQDQPSELCE Trigger: CTCACAAAGCTCTGAGGGCTGGTCTTGACTAAGCAATAAGAGCCTCAGAGTTGATTGAATTTTAAGGTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| 3UTR CAA 72 bp | CATGATAGATCCTGTTTAGTTTTGGGAAGAGAGGAGTaGATATGGCATCTTTGTGGCAGACTGCAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HDRSCLVLGREE*IWHLCGRLQVV Trigger: TACCACCTGCAGTCTGCCACAAAGATGCCATATCAACTCCTCTCTTCCCAAAACTAAACAGGATCTATCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| CDS-3UTR CAA 90 bp | GGCCTCCAGGGGAAGCAGAGATGGGGTAGGAACTCCCGCCCACCTCGGAGGGAGCAGCACAAGAGGGCCTaGAAGATGCTGCGGCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: GLQGKQRWGRNSRPPRREQHKRA*KMLRPR Trigger: CCGTGGCCGCAGCATCTTCAAGGCCCTCTTGTGCTG...CTCCCTCCGAGGTGGGCGGGAGTTCCTACCCCATCTCTGCTTCCCCTGGAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR CAA 90 bp | CTACTGCACAACTGGGCACCCAGGACCATAGTTTACCGGACGGGCACATGCACGACAGGGTCAGCATACTaGGCCAAGCTGGCAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLHNWAPRTIVYRTGTCTTGSAY*AKLAVK Trigger: CTTCACTGCCAGCTTGGCCAAGTATGCTGACCCTGT...CGTGCATGTGCCCGTCCGGTAAACTATGGTCCTGGGTGCCCAGTTGTGCAGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| CDS TCA 90 bp | GGAGGAGATCGGACTTGGCGATGGTGTTGGCCTCCTCCTTGTGTGTaGGCTCAGTGGAAGAGCTGGACTGGACAACATGCTGTGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGDRTWRWCWPPPCV*AQWKSWTGQHAVCG Trigger: TCCACACACAGCATGTTGTCCAGTCCAGCTCTTCCACTGAGCTCACACACAAGGAGGAGGCCAACACCATCGCCAAGTCCGATCTCCTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR CAA 90 bp | TGCTCTCATATTCCCAAACATGTCTGCAGCTGCTGGCTAGGTTTCTGTGTTTTCGACTTGGCGATGGTGTaGGCCTCCTCCTTGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSHIPKHVCSCWLGFCVFDLAMV*ASSLCV Trigger: CACACACAAGGAGGAGGCCAACACCATCGCCAAGTC...GAAAACACAGAAACCTAGCCAGCAGCTGCAGACATGTTTGGGAATATGAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS-3UTR CAA 90 bp | TGCTCTCATATTCCCAAACATGTCTGCAGCTGCTGGCTAGGTTTCTGTGTTTTCACAGGGTCAGCATACTaGGCCAAGCTGGCAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSHIPKHVCSCWLGFCVFTGSAY*AKLAVK Trigger: CTTCACTGCCAGCTTGGCCAAGTATGCTGACCCTGT...GAAAACACAGAAACCTAGCCAGCAGCTGCAGACATGTTTGGGAATATGAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105255.3 ENSMUST00000105256.10 |
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| CDS CAA 90 bp | CTGGACTGGACAACATGCTGTGTGTGGAAACAGCACAAGAGGGCCTaGAAGATGCTGCGGCCACGGGGTTTCTTAGGCGAGGACTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LDWTTCCVWKQHKRA*KMLRPRGFLGEDLE Trigger: CTCCAAGTCCTCGCCTAAGAAACCCCGTGGCCGCAGCATCTTCAAGGCCCTCTTGTGCTGTTTCCACACACAGCATGTTGTCCAGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS TCA 72 bp | CGGACTTGGCGATGGTGTTGGCCTCCTCCTTGTGTGTaGGCTCAGTGGAAGAGCTGGACTGGACAACATGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTWRWCWPPPCV*AQWKSWTGQHA Trigger: AGCATGTTGTCCAGTCCAGCTCTTCCACTGAGCTCACACACAAGGAGGAGGCCAACACCATCGCCAAGTCCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS CAA 72 bp | TGGAGACACTGGAGGAGATCGGACTTGGCGATGGTGTaGGCCTCCTCCTTGTGTGTGAGCTCAGTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WRHWRRSDLAMV*ASSLCVSSVEE Trigger: CTCTTCCACTGAGCTCACACACAAGGAGGAGGCCAACACCATCGCCAAGTCCGATCTCCTCCAGTGTCTCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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| CDS CAA 72 bp | ACAACATGCTGTGTGTGGAAACAGCACAAGAGGGCCTaGAAGATGCTGCGGCCACGGGGTTTCTTAGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTCCVWKQHKRA*KMLRPRGFLGE Trigger: CTCGCCTAAGAAACCCCGTGGCCGCAGCATCTTCAAGGCCCTCTTGTGCTGTTTCCACACACAGCATGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105256.10 |
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