Pregenerated sensors for CTDP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033323Ensembl transcript IDs: ENSMUST00000036229.13, ENSMUST00000160434.3, ENSMUST00000161003.2
Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGGCAGGCTGTGGCCCAGGCAGCCCGGGCTGCAGACAGGGACCTaGATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGA | + |
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Preference number: 1 (lower is better) Translates to: TGRLWPRQPGLQTGT*IRNSRSSAGPPRAG Trigger: TCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGCCCGGGCTGCCTGGGCCACAGCCTGCCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR GCA 90 bp | GCCCGGGCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTaGAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: ARAADRDLNQELQVI*RSAEGRKSGWGSQA Trigger: GGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGCCCGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR CCA 90 bp | GAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTaGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTCCTGTACACAC | + |
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Preference number: 1 (lower is better) Translates to: ELQVICRSAEGRKSG*GSQACLRVLVSCTH Trigger: GTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR CCA 90 bp | TCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTaGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTCCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: SGTPGHLQVRRGPEE*LGLSGLPASLGVLY Trigger: GTACAGGACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR GCA 90 bp | TGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTaGCTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: CRSAEGRKSGWGSQA*LRVLVSCTHICTLL Trigger: CAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR GCA 90 bp | GGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTaGGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: GPPRAGRVAGALRPA*ESWCPVHTYVHCCF Trigger: AAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR CCA 90 bp | AGGTCCAAGATGACAGGTTTTGCTATATTGCTCTCTAAATCTTACTaGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: RSKMTGFAILLSKSY*VPSPHTKYAIAFKG Trigger: GCCTTTGAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAATATAGCAAAACCTGTCATCTTGGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR TCA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTGAAAAAGGTCCAAGATaGCAGGTTTTGCTATATTGC | + |
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Preference number: 2 (lower is better) Translates to: PRAGRVAGALRPACESWCEKGPR*QVLLYC Trigger: GCAATATAGCAAAACCTGTCATCTTGGACCTTTTTC...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTATGTGTTTCTGTATGTaGAGCTCTGCAAAATATATG | + |
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Preference number: 2 (lower is better) Translates to: QVRRGPEEWLGLSGLPASMCFCM*SSAKYM Trigger: CATATATTTTGCAGAGCTCCACATACAGAAACACAT...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCTCTCTAAATCTTACTaGGTCCCCAGTCCTCACACT | + |
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Preference number: 2 (lower is better) Translates to: CRQGPESGTPGHLQVRRGLSKSY*VPSPHT Trigger: AGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG...CCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR CAA 90 bp | GAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTaGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: EGRKSGWGSQACLRV*VSCTHICTLLFYLK Trigger: TTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGAAAAAGGTCCAAGATaGCAGGTTTTGCTATATTGC | + |
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Preference number: 2 (lower is better) Translates to: AADRDLNQELQVICRSAEEKGPR*QVLLYC Trigger: GCAATATAGCAAAACCTGTCATCTTGGACCTTTTTC...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTTGGGGCTCTCAGGCCTaGCTGCGAGTCTTGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: QKLYIRFLRAVQAAFRHTWGSQA*LRVLVS Trigger: GGACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCA...AGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGCAGCCCGGGCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCATGTGTTTCTGTATGTaGAGCTCTGCAAAATATATG | + |
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Preference number: 2 (lower is better) Translates to: AQAARAADRDLNQELQVIMCFCM*SSAKYM Trigger: CATATATTTTGCAGAGCTCCACATACAGAAACACAT...GATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGCCCGGGCTGCCTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGGCCTGCCTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGCAGGTTTTGCTATATTaGTCTCTAAATCTTACTGGG | + |
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Preference number: 2 (lower is better) Translates to: SQACLRVLVSCTHICTLLQVLLY*SLNLTG Trigger: CCCAGTAAGATTTAGAGAGCAATATAGCAAAACCTG...CAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGAAAAAGGTCCAAGATaGCAGGTTTTGCTATATTGC | + |
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Preference number: 2 (lower is better) Translates to: QKLYIRFLRAVQAAFRHTEKGPR*QVLLYC Trigger: GCAATATAGCAAAACCTGTCATCTTGGACCTTTTTC...AGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR CCA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATCTCTCTAAATCTTACTaGGTCCCCAGTCCTCACACT | + |
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Preference number: 2 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNLSKSY*VPSPHT Trigger: AGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTATGTGTTTCTGTATGTaGAGCTCTGCAAAATATATG | + |
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Preference number: 2 (lower is better) Translates to: QKLYIRFLRAVQAAFRHTMCFCM*SSAKYM Trigger: CATATATTTTGCAGAGCTCCACATACAGAAACACAT...AGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR GCA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATCAGGTTTTGCTATATTaGTCTCTAAATCTTACTGGG | + |
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Preference number: 2 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNQVLLY*SLNLTG Trigger: CCCAGTAAGATTTAGAGAGCAATATAGCAAAACCTG...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR CCA 72 bp | GTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTaGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: VICRSAEGRKSG*GSQACLRVLVS Trigger: GGACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR CCA 72 bp | CCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTaGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: PGHLQVRRGPEE*LGLSGLPASLG Trigger: ACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR GCA 72 bp | GCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTaGAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: ADRDLNQELQVI*RSAEGRKSGWG Trigger: GCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR CAA 90 bp | AATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGCCTGCCTGCGAGTCTaGGTGTCCTGTACACACATA | + |
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Preference number: 3 (lower is better) Translates to: NQELQVICRSAEGRKSGWACLRV*VSCTHI Trigger: TATGTGTGTACAGGACACCAAGACTCGCAGGCAGGC...CCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGCCTGCCTGCGAGTCTaGGTGTCCTGTACACACATA | + |
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Preference number: 3 (lower is better) Translates to: AADRDLNQELQVICRSAEACLRV*VSCTHI Trigger: TATGTGTGTACAGGACACCAAGACTCGCAGGCAGGC...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR TCA 72 bp | CATGACCAGACATCACGTATCTATCCACGCTCACCATaGGAGGCCCCGTTGAGCTCTTTGGCATCACACACC | + |
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Preference number: 3 (lower is better) Translates to: HDQTSRIYPRSP*EAPLSSLASHT Trigger: GGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAGCGTGGATAGATACGTGATGTCTGGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR CCA 72 bp | ATGACAGGTTTTGCTATATTGCTCTCTAAATCTTACTaGGTCCCCAGTCCTCACACTAAATATGCTATAGCA | + |
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Preference number: 3 (lower is better) Translates to: MTGFAILLSKSY*VPSPHTKYAIA Trigger: TGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAATATAGCAAAACCTGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| 3UTR TCA 72 bp | AATTATGATAGCATCAGCTGTGAAAAAGGTCCAAGATaGCAGGTTTTGCTATATTGCTCTCTAAATCTTACT | + |
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Preference number: 3 (lower is better) Translates to: NYDSISCEKGPR*QVLLYCSLNLT Trigger: AGTAAGATTTAGAGAGCAATATAGCAAAACCTGTCATCTTGGACCTTTTTCACAGCTGATGCTATCATAATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR TCA 90 bp | CAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCGTGGCGGCATCACCCTaGGTGGGCTGCACCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QELQVICRSAEGRKSGWGVAASP*VGCTPG Trigger: GCCAGGGGTGCAGCCCACTCAGGGTGATGCCGCCAC...GCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTTGCGGTTTCGCACACTaGCAGCACCGAGCCGATGCG | + |
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Preference number: 4 (lower is better) Translates to: QVRRGPEEWLGLSGLPASCGFAH*QHRADA Trigger: CGCATCGGCTCGGTGCTGGCAGTGTGCGAAACCGCA...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTGTGAGTGGCCCTGTCTaGAGCATCAGGGCTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: QVRRGPEEWLGLSGLPASVSGPV*SIRAQH Trigger: GTGCTGAGCCCTGATGCTCCAGACAGGGCCACTCAC...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | AGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTGAGCCCGGGGCTTCCTaGGCTTCGGGGCTCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RNSRSSAGPPRAGRVAGAEPGAS*ASGLSP Trigger: AGGAGAGAGCCCCGAAGCCCAGGAAGCCCCGGGCTC...AGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CCA 90 bp | CAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCCTCTCTTCGGATCCCTaGAGCCCGGGGCTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QELQVICRSAEGRKSGWGLSSDP*SPGLPG Trigger: CCCAGGAAGCCCCGGGCTCCAGGGATCCGAAGAGAG...GCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR GCA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTGGGGTCCAGAAAGCCTaGGATGGTGTGGGCATACAG | + |
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Preference number: 4 (lower is better) Translates to: QVRRGPEEWLGLSGLPASGVQKA*DGVGIQ Trigger: CTGTATGCCCACACCATCGCAGGCTTTCTGGACCCC...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTAGTCCAAATCCTGGGTaGCGGCATCACCCTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QVRRGPEEWLGLSGLPASSPNPG*RHHPEW Trigger: CCACTCAGGGTGATGCCGCCACCCAGGATTTGGACT...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR TCA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTAGGAAATCCTTGCAGTaGGGCCTCAGGCGCGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PRAGRVAGALRPACESWCRKSLQ*GLRRVC Trigger: GCACACGCGCCTGAGGCCTCACTGCAAGGATTTCCT...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | AATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGCCAGGGGCCACCACCTaGCCTGGCTGCGCACACAGT | + |
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Preference number: 4 (lower is better) Translates to: NQELQVICRSAEGRKSGWPGATT*PGCAHS Trigger: ACTGTGTGCGCAGCCAGGCCAGGTGGTGGCCCCTGG...CCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | CAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCAAGCCTGCGATGGTGTaGGCATACAGACGGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: QELQVICRSAEGRKSGWGKPAMV*AYRRLP Trigger: CGGCAGCCGTCTGTATGCCCACACCATCGCAGGCTT...GCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | GCCCAGGCAGCCCGGGCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTCCTCTTGTGGCCTCTaGGCCCACGCATGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AQAARAADRDLNQELQVISSCGL*AHACQG Trigger: CCCCTGGCATGCGTGGGCCCAGAGGCCACAAGAGGA...GATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGCCCGGGCTGCCTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR TCA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTACAGCCAATCAGGGCTaGCCACATGTAGGTGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: QVRRGPEEWLGLSGLPASTANQG*PHVGVC Trigger: GCAAACACCTACATGTGGTCAGCCCTGATTGGCTGT...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTTGTACCAGCCCGTGCTaGAATGAGGTGAGTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PRAGRVAGALRPACESWCCTSPC*NEVSGP Trigger: AGGGCCACTCACCTCATTGCAGCACGGGCTGGTACA...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCCTTTGTTGGACATCTaGGGACAGTGCTGCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: QVRRGPEEWLGLSGLPASPLLDI*GQCCSV Trigger: GACTGAGCAGCACTGTCCCCAGATGTCCAACAAAGG...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | GAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGCCCCCACTCGTGTCCTaGGGCCCACTGTGCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ESGTPGHLQVRRGPEEWLPPLVS*GPLCSG Trigger: TCCAGAGCACAGTGGGCCCCAGGACACGAGTGGGGG...CAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGAGCCCGGGGCTTCCTaGGCTTCGGGGCTCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: AADRDLNQELQVICRSAEEPGAS*ASGLSP Trigger: AGGAGAGAGCCCCGAAGCCCAGGAAGCCCCGGGCTC...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGGCAGCCCGGGCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCTGGACTCCCCGCTaGACTCGCTGGCAGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQAARAADRDLNQELQVICWTPR*TRWQRL Trigger: AAGACGCTGCCAGCGAGTCCAGCGGGGAGTCCAGCA...GATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGCCCGGGCTGCCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR TCA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTCACACAGGCCCTTCATaGCAACAGGATGGCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PRAGRVAGALRPACESWCHTGPS*QQDGCI Trigger: GATGCAGCCATCCTGTTGTCATGAAGGGCCTGTGTG...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR TCA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGCAGGAGAGGCCCGAGTaGGGGGCCAGGCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AADRDLNQELQVICRSAEQERPE*GARLPS Trigger: AGAAGGAAGCCTGGCCCCTCACTCGGGCCTCTCCTG...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTGAAAGGGGGACCTGCTaGCTTCCATTTTTACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVRRGPEEWLGLSGLPASERGTC*LPFLLC Trigger: GCAGAGTAAAAATGGAAGGCAGCAGGTCCCCCTTTC...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGTCCCAGGGGGCTTGCTaGAGCTCTGCCCCCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AADRDLNQELQVICRSAESQGAC*SSAPTR Trigger: ACGAGTGGGGGCAGAGCTGCAGCAAGCCCCCTGGGA...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | GCCCAGGCAGCCCGGGCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGGAAACCGTCGCTGTaGAAAGGGGGACCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQAARAADRDLNQELQVIWKPSL*KGGPAA Trigger: GGCAGCAGGTCCCCCTTTCCACAGCGACGGTTTCCA...GATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGCCCGGGCTGCCTGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTAGACACAGGGAGCTCTaGAGCTTCAGTTGGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRAGRVAGALRPACESWCRHREL*SFSWLV Trigger: CACGAGCCAACTGAAGCTCCAGAGCTCCCTGTGTCT...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | GCCCAGGCAGCCCGGGCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCCCTCATCATCGTTGCTaGACTCCCCGCTGGACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AQAARAADRDLNQELQVIPHHRC*TPRWTR Trigger: GCGAGTCCAGCGGGGAGTCCAGCAACGATGATGAGG...GATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGCCCGGGCTGCCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR TCA 90 bp | TGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCGTGCTGCAATGAGGTaGGTGGCCCTGTCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPESGTPGHLQVRRGRAAMR*VALSGA Trigger: TGCTCCAGACAGGGCCACTCACCTCATTGCAGCACG...CCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | CTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCCTTCTGACCTGCTGCTaGTCTCGCTGCTCTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNQELQVICRSAEGRKSGLLTCC*SRCSRC Trigger: ACAGCGAGAGCAGCGAGAGCAGCAGCAGGTCAGAAG...GCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | CAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTATCACAGCCACATCTaGGAGCACCTTGCTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QELQVICRSAEGRKSGWGYHSHI*EHLALE Trigger: CTCAAGAGCAAGGTGCTCGCAGATGTGGCTGTGATA...GCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | AGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTAGTGTACAGCGGCATTaGCTCGGACATACTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNSRSSAGPPRAGRVAGASVQRH*LGHTGL Trigger: CAACCCAGTATGTCCGAGGCAATGCCGCTGTACACT...AGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CCA 90 bp | TCCACGCTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCTCCTCTTGTGGCCTCTaGGCCCACGCATGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: STLTMRGPVELFGITHQLSSCGL*AHACQG Trigger: CCCCTGGCATGCGTGGGCCCAGAGGCCACAAGAGGA...GAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAGCGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCATTTGCTGCTGATGTaGCTGAACAGCTCTTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVRRGPEEWLGLSGLPASHLLLM*LNSSYN Trigger: GTTGTAAGAGCTGTTCAGCCACATCAGCAGCAAATG...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161003.2 |
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| CDS-3UTR TCA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTCTTCTCGGTCATCGATaGTGCAAACCATTGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRAGRVAGALRPACESWCLLGHR*CKPLSL Trigger: GAGACTCAATGGTTTGCATCATCGATGACCGAGAAG...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR TCA 90 bp | TCCACGCTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCAGCCCGTGCTGCAATaGGGTGAGTGGCCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STLTMRGPVELFGITHQLQPVLQ*GEWPCL Trigger: CAGACAGGGCCACTCACCTCATTGCAGCACGGGCTG...GAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAGCGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | CTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCATGAGTGGGAAGAGCTaGTCCTCCACCTTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNQELQVICRSAEGRKSGMSGKS*SSTLSQ Trigger: CTGGGACAAGGTGGAGGAGCAGCTCTTCCCACTCAT...GCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGCCTCCTCATCATCGTTaGTGGACTCCCCGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AADRDLNQELQVICRSAEPPHHR*WTPRWT Trigger: AGTCCAGCGGGGAGTCCAGCAACGATGATGAGGAGG...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR GCA 90 bp | GCCCAGGCAGCCCGGGCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCCTGCTTCTGAACTGCTaGCCTCCTCATCATCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQAARAADRDLNQELQVILLLNC*PPHHRC Trigger: GCAACGATGATGAGGAGGGCAGCAGTTCAGAAGCAG...GATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGCCCGGGCTGCCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CCA 90 bp | AATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGCGGCCCAGCTGGAAGTaGAAGATGCCTTTGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NQELQVICRSAEGRKSGWRPSWK*KMPLLD Trigger: GTCCAACAAAGGCATCTTCCACTTCCAGCTGGGCCG...CCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | TGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCCCGCTGGACTCGCTaGCAGCGTCTTCCTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPESGTPGHLQVRRGPRWTR*QRLPHL Trigger: TAAATGAGGAAGACGCTGCCAGCGAGTCCAGCGGGG...CCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR TCA 90 bp | TCTCAGGCCTGCCTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGGGGGCTGGAGCCCTCTaGCCTTCTGACCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQACLRVLVSCTHICTLLGAGAL*PSDLLL Trigger: CAGCAGCAGGTCAGAAGGTCAGAGGGCTCCAGCCCC...CAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | AATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGAGTGTACAGCGGCATTaGCTCGGACATACTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NQELQVICRSAEGRKSGWSVQRH*LGHTGL Trigger: CAACCCAGTATGTCCGAGGCAATGCCGCTGTACACT...CCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CCA 90 bp | TGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGTTGCACTCCTGTGCCTaGCGCACCTTCTCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPESGTPGHLQVRRGLHSCA*RTFSVP Trigger: TGGTACAGAGAAGGTGCGCCAGGCACAGGAGTGCAA...CCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | TGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGAAGGTGAAAACGTaGAGCTCATACAGCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPESGTPGHLQVRRGPKVKT*SSYSLA Trigger: CGCCAAGCTGTATGAGCTGCACGTTTTCACCTTCGG...CCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | AATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGTTCGGGGCTCTCTCCTaGTCATTGTCTTGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQELQVICRSAEGRKSGWFGALS*SLSWSS Trigger: AGAAGACCAAGACAATGAGCAGGAGAGAGCCCCGAA...CCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR TCA 90 bp | TCCACGCTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCGACGGCTGCCGAAGGTaGAAACGTGCAGCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: STLTMRGPVELFGITHQLDGCRR*KRAAHT Trigger: TGTATGAGCTGCACGTTTTCACCTTCGGCAGCCGTC...GAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAGCGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | CTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTCTGTCTGGAAAGACTaGAGGGCTGTTATCCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LNQELQVICRSAEGRKSGSVWKD*RAVIPM Trigger: CATAGGGATAACAGCCCTGCAGTCTTTCCAGACAGA...GCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGTTCGGGGCTCTCTCCTaGTCATTGTCTTGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AADRDLNQELQVICRSAEFGALS*SLSWSS Trigger: AGAAGACCAAGACAATGAGCAGGAGAGAGCCCCGAA...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CCA 90 bp | TGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGACTGGGAAAAACTCCTaGCACAGCCTCACCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPESGTPGHLQVRRGTGKNS*HSLTTI Trigger: AATGGTGGTGAGGCTGTGCCAGGAGTTTTTCCCAGT...CCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTTCCATCTTGAGATTCTaGCAACTCTTCACCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PRAGRVAGALRPACESWCSILRF*QLFTKH Trigger: ATGTTTGGTGAAGAGTTGCCAGAATCTCAAGATGGA...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR GCA 90 bp | CTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCTCAGAGTGTTTGCACTCCTGTaGCTGGCGCACCTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTMRGPVELFGITHQLLRVFALL*LAHLLC Trigger: ACAGAGAAGGTGCGCCAGGCACAGGAGTGCAAACAC...TCTGAGGAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGATGGAACAAGGCTGTTaGAAGCACACTGTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AADRDLNQELQVICRSAEMEQGC*KHTVSV Trigger: GACAGACACAGTGTGCTTCCAACAGCCTTGTTCCAT...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR TCA 90 bp | CTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCTCAGACGAGCACCTTGCTCTTaGGCTCTGGCACAATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTMRGPVELFGITHQLLRRAPCS*ALAQFS Trigger: GGAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCG...TCTGAGGAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR GCA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGAAAGTTTGTTGGGTaGAGCCCACTGAATATCACA | + |
|
Preference number: 4 (lower is better) Translates to: AADRDLNQELQVICRSAEGKFVG*SPLNIT Trigger: TGTGATATTCAGTGGGCTGCACCCAACAAACTTTCC...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CCA 90 bp | CTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCTCAGAGCACACTGTGCACCATaGAAACCGTCGCTGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTMRGPVELFGITHQLLRAHCAP*KPSLWK Trigger: TTTCCACAGCGACGGTTTCCATGGTGCACAGTGTGC...TCTGAGGAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | TCCACGCTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCGGAATGGATGGGTGTTaGATGGAACAAGGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: STLTMRGPVELFGITHQLGMDGC*MEQGCW Trigger: CCAACAGCCTTGTTCCATCCAACACCCATCCATTCC...GAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAGCGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | GAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGATTGTCTTGGTCTTCTaGCTTCTTCTTCTCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESGTPGHLQVRRGPEEWLIVLVF*LLLLDV Trigger: GACATCGAGAAGAAGAAGCCAGAAGACCAAGACAAT...CAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGGAGCCCGGGGCTTCCTaGGCTTCGGGGCTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNFTSDFLGQYRPPFVTLEPGAS*ASGLSP Trigger: AGGAGAGAGCCCCGAAGCCCAGGAAGCCCCGGGCTC...CAGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | CTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCTCAGATTTAGTTTCCTCTTGTaGCCTCTGGGCCCACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTMRGPVELFGITHQLLRFSFLL*PLGPRM Trigger: CATGCGTGGGCCCAGAGGCCACAAGAGGAAACTAAA...TCTGAGGAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | CTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTCCATCTTGAGATTCTaGCAACTCTTCACCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LNQELQVICRSAEGRKSGSILRF*QLFTKH Trigger: ATGTTTGGTGAAGAGTTGCCAGAATCTCAAGATGGA...GCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CCA 90 bp | TGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGATTGTCTTGGTCTTCTaGCTTCTTCTTCTCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPESGTPGHLQVRRGIVLVF*LLLLDV Trigger: GACATCGAGAAGAAGAAGCCAGAAGACCAAGACAAT...CCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGTCCTCTTGTGGCCTCTaGGCCCACGCATGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KNFTSDFLGQYRPPFVTLSSCGL*AHACQG Trigger: CCCCTGGCATGCGTGGGCCCAGAGGCCACAAGAGGA...CAGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTACCTCATCATCGTTGCTaGACTCCCCGCTGGACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLPHHRC*TPRWTR Trigger: GCGAGTCCAGCGGGGAGTCCAGCAACGATGATGAGG...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR GCA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTACTTTCCGGTCCACACTaGCATTGCCCAGGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLLSGPH*HCPGHR Trigger: TCTGTGGCCTGGGCAATGGCAGTGTGGACCGGAAAG...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCTCAGACACATCACCTGTGCCTaGGAAGTAGACGTACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTMRGPVELFGITHQLLRHITCA*EVDVLL Trigger: AAGAAGTACGTCTACTTCCCAGGCACAGGTGATGTG...TCTGAGGAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | TCCACGCTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCACAGGAAAGTTTGTTaGGTGCAGCCCACTGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: STLTMRGPVELFGITHQLHRKVC*VQPTEY Trigger: ATATTCAGTGGGCTGCACCCAACAAACTTTCCTGTG...GAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAGCGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | TGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGTCCATCTTGAGATTCTaGCAACTCTTCACCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CRQGPESGTPGHLQVRRGSILRF*QLFTKH Trigger: ATGTTTGGTGAAGAGTTGCCAGAATCTCAAGATGGA...CCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGTGCTGGACTCCCCGCTaGACTCGCTGGCAGCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KNFTSDFLGQYRPPFVTLCWTPR*TRWQRL Trigger: AAGACGCTGCCAGCGAGTCCAGCGGGGAGTCCAGCA...CAGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR TCA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTAGTGGCTGAACAGCTCTaGAGGAGGAAGGCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLVAEQL*RRKALH Trigger: ATGGAGAGCCTTCCTCCTTCAGAGCTGTTCAGCCAC...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGCCTGCCTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGATTTACTTTTCTCCTTaGCTGAGTTTCCCGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQACLRVLVSCTHICTLLIYFSP*LSFPGC Trigger: GCAGCCCGGGAAACTCAGGCAAGGAGAAAAGTAAAT...CAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | CAAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGACCTTCTGACCTGCTaGTGCTCTCGCTGCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLYIRFLRAVQAAFRHTDLLTC*CSRCSR Trigger: GCGAGAGCAGCGAGAGCAGCAGCAGGTCAGAAGGTC...AGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAGGCCACCACCTGGCCTaGCTGCGCACACAGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LRVLVSCTHICTLLFYLKGHHLA*LRTQFT Trigger: CGTGAACTGTGTGCGCAGCCAGGCCAGGTGGTGGCC...TTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTAGGGCCCACTGTGCTCTaGAGCTGCTTTTGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLGPTVL*SCFCSL Trigger: GAGAGAACAAAAGCAGCTCCAGAGCACAGTGGGCCC...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAACTCTCTTCGGATCCCTaGAGCCCGGGGCTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVLVSCTHICTLLFYLKLSSDP*SPGLPG Trigger: CCCAGGAAGCCCCGGGCTCCAGGGATCCGAAGAGAG...TTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR TCA 90 bp | CTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCTCAGACCTCCCTTAGAAGAATaGTTTACTTTTCTCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTMRGPVELFGITHQLLRPPLEE*FTFLLA Trigger: GGCAAGGAGAAAAGTAAATCATTCTTCTAAGGGAGG...TCTGAGGAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR TCA 90 bp | TTGCTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCAAGCCCTCTGACCTTCTaGCCTGCTGCTGCTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSKSYWVPSPHTKYAIASPLTF*PAAALA Trigger: AGCGAGAGCAGCAGCAGGTCAGAAGGTCAGAGGGCT...TGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR TCA 90 bp | TTGCTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCACGTTCACCCTCCTCCTaGGTGTCCAGGTCTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSKSYWVPSPHTKYAIARSPSS*VSRSDP Trigger: AGGGTCAGACCTGGACACTCAGGAGGAGGGTGAACG...TGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR TCA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTAGGGTATCGTCATCTATaGGTGGGAAGAGCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLGYRHL*VGRAAP Trigger: AGGAGCAGCTCTTCCCACTCATAGATGACGATACCC...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | TTGCTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCAGGTCCACACTGCCATTaGCCAGGCCACAGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSKSYWVPSPHTKYAIAGPHCH*PGHRGC Trigger: ACAGCCTCTGTGGCCTGGGCAATGGCAGTGTGGACC...TGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTAAGTGTACAGCGGCATTaGCTCGGACATACTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLSVQRH*LGHTGL Trigger: CAACCCAGTATGTCCGAGGCAATGCCGCTGTACACT...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGCCTGCCTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTCTCATCTGCTTTACTaGGAAAAACTCCTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQACLRVLVSCTHICTLLSHLLY*EKLLAQ Trigger: CTGTGCCAGGAGTTTTTCCCAGTAAAGCAGATGAGA...CAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTACCTCGGGACCAGGATaGGCCTTGGAATGGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKLYIRFLRAVQAAFRHTTSGPG*ALEWMG Trigger: ACCCATCCATTCCAAGGCCCATCCTGGTCCCGAGGT...AGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTATTTAGTTTCCTCTTGTaGCCTCTGGGCCCACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLFSFLL*PLGPRM Trigger: CATGCGTGGGCCCAGAGGCCACAAGAGGAAACTAAA...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTCCCCGCTGGACTCGCTaGCAGCGTCTTCCTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QKLYIRFLRAVQAAFRHTPRWTR*QRLPHL Trigger: TAAATGAGGAAGACGCTGCCAGCGAGTCCAGCGGGG...AGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCGCCTGCAGTGACACCTaGCTGCTCACTGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSYWVPSPHTKYAIAFACSDT*LLTVLG Trigger: TCCCAGAACAGTGAGCAGTCAGGTGTCACTGCAGGC...GAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTATTCGGGGCTCTCTCCTaGTCATTGTCTTGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLFGALS*SLSWSS Trigger: AGAAGACCAAGACAATGAGCAGGAGAGAGCCCCGAA...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR TCA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTAGATGATGCAAACCATTaGGTCTCCACAGGGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLDDANH*VSTGEK Trigger: CTTTTCCCCTGTGGAGACTCAATGGTTTGCATCATC...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | CTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCAACTCCGGCACACTGTaGACCATGGAAACCGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSYWVPSPHTKYAIAFNSGTL*TMETVA Trigger: AGCGACGGTTTCCATGGTGCACAGTGTGCCGGAGTT...GAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | TTGCTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATCCTGGGGCCCACTGTaGTCTGGAGCTGCTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSKSYWVPSPHTKYAIASWGPL*SGAAFV Trigger: AACAAAAGCAGCTCCAGAGCACAGTGGGCCCCAGGA...TGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | AAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGGCAGTGACACCTGACTaGTCACTGTTCTGGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNFTSDFLGQYRPPFVTLAVTPD*SLFWDS Trigger: GGAATCCCAGAACAGTGAGCAGTCAGGTGTCACTGC...CAGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | CAAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTCTGCTTCTGAACTGCTaGCCTCCTCATCATCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKLYIRFLRAVQAAFRHTLLLNC*PPHHRC Trigger: GCAACGATGATGAGGAGGGCAGCAGTTCAGAAGCAG...AGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | CTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAACCCCGCTGGACTCGCTaGCAGCGTCTTCCTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LRVLVSCTHICTLLFYLKPRWTR*QRLPHL Trigger: TAAATGAGGAAGACGCTGCCAGCGAGTCCAGCGGGG...TTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR GCA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATCCTCCTCATCATCGTTaGTGGACTCCCCGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNPPHHR*WTPRWT Trigger: AGTCCAGCGGGGAGTCCAGCAACGATGATGAGGAGG...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTTAGTTTCCTCTTGTaGCCTCTGGGCCCACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLSKSYWVPSPHTKYAIAFSFLL*PLGPRM Trigger: CATGCGTGGGCCCAGAGGCCACAAGAGGAAACTAAA...TGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCAGCTGGAAGTGGAAGATaGCTTTGTTGGACATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSKSYWVPSPHTKYAIAAGSGR*LCWTSG Trigger: CCCAGATGTCCAACAAAGGCATCTTCCACTTCCAGC...TGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATGCTCTCGCTGTCGCTaGACAGGTCAAAGTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSKSYWVPSPHTKYAIACSRCR*TGQSPN Trigger: ATTTGGACTTTGACCTGTCCAGCGACAGCGAGAGCA...TGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATTCTGACCCTTTGTCATaGGGGTGGATGCTAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNSDPLS*GWMLGP Trigger: TGGGCCTAGCATCCACCCCCATGACAAAGGGTCAGA...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCGACTGCTCACTGTTCTaGGATTCCGTTTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSYWVPSPHTKYAIAFDCSLF*DSVSAS Trigger: AGAGGCTGAAACGGAATCCCAGAACAGTGAGCAGTC...GAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCATCGTCATCTATGAGTaGGAAGAGCTGCTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKSYWVPSPHTKYAIAFIVIYE*EELLLH Trigger: GTGGAGGAGCAGCTCTTCCCACTCATAGATGACGAT...GAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATTTTTTACTCTGCAGCTaGGTCAGGTCCTGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNFLLCS*VRSWPH Trigger: GTGTGGCCAGGACCTGACCCAGCTGCAGAGTAAAAA...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAATGGATGGGTGTTGGATaGAACAAGGCTGTTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVLVSCTHICTLLFYLKWMGVG*NKAVGS Trigger: GCTTCCAACAGCCTTGTTCCATCCAACACCCATCCA...TTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATGGATGGGCCTTGGAATaGATGGGTGTTGGATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNGWALE*MGVGWN Trigger: GTTCCATCCAACACCCATCCATTCCAAGGCCCATCC...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCCATTTGCTGCTGATGTaGCTGAACAGCTCTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSYWVPSPHTKYAIAFHLLLM*LNSSEG Trigger: TCCTTCAGAGCTGTTCAGCCACATCAGCAGCAAATG...GAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR GCA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATCTTCCATTTTTACTCTaGAGCTGGGTCAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNLPFLL*SWVRSW Trigger: CCAGGACCTGACCCAGCTGCAGAGTAAAAATGGAAG...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCGCAGCTCATACAGCTTaGCGATTTTCTCCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSYWVPSPHTKYAIAFAAHTA*RFSPGN Trigger: ATTTCCTGGAGAAAATCGCCAAGCTGTATGAGCTGC...GAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | CTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAATTCATGACAACAGGATaGCTGCATCCTTCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRVLVSCTHICTLLFYLKFMTTG*LHPSNL Trigger: GAGATTGGAAGGATGCAGCCATCCTGTTGTCATGAA...TTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | AAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGAATTTTCCGTATATCTaGAGCTTCCTCAAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KNFTSDFLGQYRPPFVTLNFPYI*SFLKLL Trigger: AAGGAGCTTGAGGAAGCTCCAGATATACGGAAAATT...CAGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CCA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATATTGTCTTGGTCTTCTaGCTTCTTCTTCTCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNIVLVF*LLLLDV Trigger: GACATCGAGAAGAAGAAGCCAGAAGACCAAGACAAT...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS GCA 90 bp | AGAGGCCGCGCGAGCCGGTGCCGGCCCTGCGGGCTGCGCGGAGGCTaGGGTTTCGCACACTGCCAGCACCGAGCCGATGCGCACGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RGRASRCRPCGLRGG*GFAHCQHRADAHGR Trigger: GCGACCGTGCGCATCGGCTCGGTGCTGGCAGTGTGCGAAACCGCAGCCTCCGCGCAGCCCGCAGGGCCGGCACCGGCTCGCGCGGCCTCT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 90 bp | ACGCAGCCCCCAGAGGCCGCGCGAGCCGGTGCCGGCCCTGCGGGCTaGGCGGAGGCTGCGGTTTCGCACACTGCCAGCACCGAGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TQPPEAARAGAGPAG*AEAAVSHTASTEPM Trigger: CATCGGCTCGGTGCTGGCAGTGTGCGAAACCGCAGCCTCCGCGCAGCCCGCAGGGCCGGCACCGGCTCGCGCGGCCTCTGGGGGCTGCGT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 90 bp | GCTGCGCGGAGGCTGCGGTTTCGCACACTGCCAGCACCGAGCCGATaGGCACGGTCGCGCCCGCCGCCACCTTCCACTCCAGCAGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: AARRLRFRTLPAPSR*ARSRPPPPSTPADA Trigger: TGCGTCTGCTGGAGTGGAAGGTGGCGGCGGGCGCGACCGTGCGCATCGGCTCGGTGCTGGCAGTGTGCGAAACCGCAGCCTCCGCGCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 90 bp | GTGGCCTCTGGGCCCACGCATGCCAGGGGTGCTCCTCTCGCCAGATaGGGGCAAGCCTACAGGCTGCTCTCTTCGGATCCCTGGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VASGPTHARGAPLAR*GQAYRLLSSDPWSP Trigger: CGGGCTCCAGGGATCCGAAGAGAGCAGCCTGTAGGCTTGCCCTCATCTGGCGAGAGGAGCACCCCTGGCATGCGTGGGCCCAGAGGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS GCA 90 bp | TCACCACCATTGAGCTCTCGGGAGGCCTTCCCAAGGCCATTGCTGTaGTCCACCCCGGGAGCAGGCCTGCCGTCCTCAGGGTCCCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SPPLSSREAFPRPLL*STPGAGLPSSGSLT Trigger: CGTGAGGGACCCTGAGGACGGCAGGCCTGCTCCCGGGGTGGAGCACAGCAATGGCCTTGGGAAGGCCTCCCGAGAGCTCAATGGTGGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 90 bp | ATGCCAGGGGTGCTCCTCTCGCCAGATGAGGGCAAGCCTACAGGCTaGTCTCTTCGGATCCCTGGAGCCCGGGGCTTCCTGGGCTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: MPGVLLSPDEGKPTG*SLRIPGARGFLGFG Trigger: CCCGAAGCCCAGGAAGCCCCGGGCTCCAGGGATCCGAAGAGAGCAGCCTGTAGGCTTGCCCTCATCTGGCGAGAGGAGCACCCCTGGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS CCA 90 bp | TCCTTCCAATCTCACCAGAAGTGCTCCAGGGGCCACCACCTGGCCTaGCTGCGCACACAGTTCACGGACCACGCCGGCGCGCTCCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SFQSHQKCSRGHHLA*LRTQFTDHAGALRP Trigger: AGGTCGGAGCGCGCCGGCGTGGTCCGTGAACTGTGTGCGCAGCCAGGCCAGGTGGTGGCCCCTGGAGCACTTCTGGTGAGATTGGAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 90 bp | CTGCATCCTTCCAATCTCACCAGAAGTGCTCCAGGGGCCACCACCTaGCCTGGCTGCGCACACAGTTCACGGACCACGCCGGCGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHPSNLTRSAPGATT*PGCAHSSRTTPARS Trigger: GGAGCGCGCCGGCGTGGTCCGTGAACTGTGTGCGCAGCCAGGCCAGGTGGTGGCCCCTGGAGCACTTCTGGTGAGATTGGAAGGATGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 90 bp | AGGCCTTCCCAAGGCCATTGCTGTGCTCCACCCCGGGAGCAGGCCTaGCGTCCTCAGGGTCCCTCACGGAGAGAGCTTGTTCCAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RPSQGHCCAPPREQA*RPQGPSRRELVPRR Trigger: ACGCCTTGGAACAAGCTCTCTCCGTGAGGGACCCTGAGGACGGCAGGCCTGCTCCCGGGGTGGAGCACAGCAATGGCCTTGGGAAGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | GAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGACTCTCCCAGGGGGCTaGCTGCAGCTCTGCCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ESGTPGHLQVRRGPEEWLTLPGG*LQLCPH Trigger: GTGGGGGCAGAGCTGCAGCAAGCCCCCTGGGAGAGT...CAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | GCCCAGGCAGCCCGGGCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCCCCTCCTCATCATCGTaGCTGGACTCCCCGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AQAARAADRDLNQELQVIPSSSS*LDSPLD Trigger: GTCCAGCGGGGAGTCCAGCAACGATGATGAGGAGGG...GATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGCCCGGGCTGCCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS GCA 90 bp | GCTCCGCCTCCAGAGCAGCGGCCATCTCATCTGCTTCTGAACTGCTaGCCTCCTCATCATCGTTGCTGGACTCCCCGCTGGACTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: APPPEQRPSHLLLNC*PPHHRCWTPRWTRW Trigger: CCAGCGAGTCCAGCGGGGAGTCCAGCAACGATGATGAGGAGGGCAGCAGTTCAGAAGCAGATGAGATGGCCGCTGCTCTGGAGGCGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS CCA 90 bp | TCCCACTCACAAGACACAGGGAGCTCTGGAGCTTCAGTTGGCTCGTaGCCACTAGAGCTGCTGGCAGGAGAGGCCCGAGTGAGGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SHSQDTGSSGASVGS*PLELLAGEARVRGQ Trigger: CTGGCCCCTCACTCGGGCCTCTCCTGCCAGCAGCTCTAGTGGCCACGAGCCAACTGAAGCTCCAGAGCTCCCTGTGTCTTGTGAGTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTGAGTGTACAGCGGCATaGCCTCGGACATACTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRAGRVAGALRPACESWCECTAA*PRTYWV Trigger: AACCCAGTATGTCCGAGGCAATGCCGCTGTACACTC...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CAA 90 bp | AATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGCCCTCCTCATCATCGTaGCTGGACTCCCCGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NQELQVICRSAEGRKSGWPSSSS*LDSPLD Trigger: GTCCAGCGGGGAGTCCAGCAACGATGATGAGGAGGG...CCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS TCA 90 bp | TGTGCCTGGCGCACCTTCTCTGTACCAGCCCGTGCTGCAATGAGGTaGGTGGCCCTGTCTGGAGCATCAGGGCTCAGCACCAGCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CAWRTFSVPARAAMR*VALSGASGLSTSWV Trigger: TACCCAGCTGGTGCTGAGCCCTGATGCTCCAGACAGGGCCACTCACCTCATTGCAGCACGGGCTGGTACAGAGAAGGTGCGCCAGGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 90 bp | CCGACCATCCCACTCACAAGACACAGGGAGCTCTGGAGCTTCAGTTaGCTCGTGGCCACTAGAGCTGCTGGCAGGAGAGGCCCGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PTIPLTRHRELWSFS*LVATRAAGRRGPSE Trigger: CTCACTCGGGCCTCTCCTGCCAGCAGCTCTAGTGGCCACGAGCCAACTGAAGCTCCAGAGCTCCCTGTGTCTTGTGAGTGGGATGGTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 90 bp | AGCCTACAGGCTGCTCTCTTCGGATCCCTGGAGCCCGGGGCTTCCTaGGCTTCGGGGCTCTCTCCTGCTCATTGTCTTGGTCTTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLQAALFGSLEPGAS*ASGLSPAHCLGLLA Trigger: AGCCAGAAGACCAAGACAATGAGCAGGAGAGAGCCCCGAAGCCCAGGAAGCCCCGGGCTCCAGGGATCCGAAGAGAGCAGCCTGTAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTATGTCGTCGACCTCTTaGTCCATACTCTCTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVRRGPEEWLGLSGLPASMSSTS*SILSKS Trigger: GGACTTAGAGAGTATGGACAAAGAGGTCGACGACAT...ACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CAA 90 bp | CAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCGCTCTCTCCTGCTCATaGTCTTGGTCTTCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QELQVICRSAEGRKSGWGALSCS*SWSSGF Trigger: GAAGCCAGAAGACCAAGACAATGAGCAGGAGAGAGC...GCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CAA 90 bp | TGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCCTCCTCATCATCGTaGCTGGACTCCCCGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CRQGPESGTPGHLQVRRGPSSSS*LDSPLD Trigger: GTCCAGCGGGGAGTCCAGCAACGATGATGAGGAGGG...CCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS TCA 90 bp | CCACCTTGTCCCAGCGCTCCAGGCAGCTCCACAGCCAATCAGGGCTaGCCACATGTAGGTGTTTGCACTCCTGTGCCTGGCGCACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPCPSAPGSSTANQG*PHVGVCTPVPGAPS Trigger: AGAAGGTGCGCCAGGCACAGGAGTGCAAACACCTACATGTGGTCAGCCCTGATTGGCTGTGGAGCTGCCTGGAGCGCTGGGACAAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 90 bp | ACCGTCGCTGTGGAAAGGGGGACCTGCTGCCTTCCATTTTTACTCTaGAGCTGGGTCAGGTCCTGGCCACACTCGGCACACAGGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVAVERGTCCLPFLL*SWVRSWPHSAHRPF Trigger: GAAGGGCCTGTGTGCCGAGTGTGGCCAGGACCTGACCCAGCTGCAGAGTAAAAATGGAAGGCAGCAGGTCCCCCTTTCCACAGCGACGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | CCCTGGCGTTGTCCGACCATCCCACTCACAAGACACAGGGAGCTCTaGAGCTTCAGTTGGCTCGTGGCCACTAGAGCTGCTGGCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PWRCPTIPLTRHREL*SFSWLVATRAAGRR Trigger: TCTCCTGCCAGCAGCTCTAGTGGCCACGAGCCAACTGAAGCTCCAGAGCTCCCTGTGTCTTGTGAGTGGGATGGTCGGACAACGCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | CTTCTCTGTACCAGCCCGTGCTGCAATGAGGTGAGTGGCCCTGTCTaGAGCATCAGGGCTCAGCACCAGCTGGGTAAGGACCTTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLCTSPCCNEVSGPV*SIRAQHQLGKDLGS Trigger: GGAGCCAAGGTCCTTACCCAGCTGGTGCTGAGCCCTGATGCTCCAGACAGGGCCACTCACCTCATTGCAGCACGGGCTGGTACAGAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | ATGTGGCTGAACAGCTCTGAAGGAGGAAGGCTCTCCATGGTTAAGTaGGGCACTGGAGGGAGCTGGTGCAGAACCCTGGGGGCCCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: MWLNSSEGGRLSMVK*GTGGSWCRTLGAHP Trigger: CGGATGGGCCCCCAGGGTTCTGCACCAGCTCCCTCCAGTGCCCCACTTAACCATGGAGAGCCTTCCTCCTTCAGAGCTGTTCAGCCACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | TCCACGCTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCGGTCCACACTGCCATaGCCCAGGCCACAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: STLTMRGPVELFGITHQLRSTLP*PRPQRL Trigger: CAGCCTCTGTGGCCTGGGCAATGGCAGTGTGGACCG...GAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAGCGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | AATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGACCAGGATGGGCCTaGGAATGGATGGGTGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NQELQVICRSAEGRKSGWGPGWA*EWMGVG Trigger: TCCAACACCCATCCATTCCAAGGCCCATCCTGGTCC...CCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | AGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGGGCTCTCGGACATACTGGGTaGTCGCTTTCTTCTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNSRSSAGPPRAGRVAGALGHTG*SLSSSR Trigger: CCTGCTAGAAGAAAGCGACAACCCAGTATGTCCGAG...AGCCCCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS GCA 90 bp | GCTCACTGTTCTGGGATTCCGTTTCAGCCTCTTTCCGGTCCACACTaGCATTGCCCAGGCCACAGAGGCTGTCCCGTTCACCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AHCSGIPFQPLSGPH*HCPGHRGCPVHPPP Trigger: AGGAGGAGGGTGAACGGGACAGCCTCTGTGGCCTGGGCAATGGCAGTGTGGACCGGAAAGAGGCTGAAACGGAATCCCAGAACAGTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 90 bp | CGGATCCCTGGAGCCCGGGGCTTCCTGGGCTTCGGGGCTCTCTCCTaGTCATTGTCTTGGTCTTCTGGCTTCTTCTTCTCGATGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RIPGARGFLGFGALS*SLSWSSGFFFSMSL Trigger: CAGTGACATCGAGAAGAAGAAGCCAGAAGACCAAGACAATGAGCAGGAGAGAGCCCCGAAGCCCAGGAAGCCCCGGGCTCCAGGGATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS GCA 90 bp | CATTTAGTTTCCTCTTGTGGCCTCTGGGCCCACGCATGCCAGGGGTaGTCCTCTCGCCAGATGAGGGCAAGCCTACAGGCTGCTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HLVSSCGLWAHACQG*SSRQMRASLQAALF Trigger: GAAGAGAGCAGCCTGTAGGCTTGCCCTCATCTGGCGAGAGGAGCACCCCTGGCATGCGTGGGCCCAGAGGCCACAAGAGGAAACTAAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS GCA 90 bp | CGTCTTCCTCATTTAGTTTCCTCTTGTGGCCTCTGGGCCCACGCATaGCAGGGGTGCTCCTCTCGCCAGATGAGGGCAAGCCTACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLPHLVSSCGLWAHA*QGCSSRQMRASLQA Trigger: AGCCTGTAGGCTTGCCCTCATCTGGCGAGAGGAGCACCCCTGGCATGCGTGGGCCCAGAGGCCACAAGAGGAAACTAAATGAGGAAGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS CCA 90 bp | AGGTCCTGGCCACACTCGGCACACAGGCCCTTCATGACAACAGGATaGCTGCATCCTTCCAATCTCACCAGAAGTGCTCCAGGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RSWPHSAHRPFMTTG*LHPSNLTRSAPGAT Trigger: GGTGGCCCCTGGAGCACTTCTGGTGAGATTGGAAGGATGCAGCCATCCTGTTGTCATGAAGGGCCTGTGTGCCGAGTGTGGCCAGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTTGCAGCTCATACAGCTaGGCGATTTTCTCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PRAGRVAGALRPACESWCCSSYS*AIFSRK Trigger: TTTCCTGGAGAAAATCGCCAAGCTGTATGAGCTGCA...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | CTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTCCAGGTCTGACCCTTaGTCATGGGGGTGGATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LNQELQVICRSAEGRKSGSRSDP*SWGWML Trigger: TAGCATCCACCCCCATGACAAAGGGTCAGACCTGGA...GCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | GAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGAGTGTACAGCGGCATaGCCTCGGACATACTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESGTPGHLQVRRGPEEWLECTAA*PRTYWV Trigger: AACCCAGTATGTCCGAGGCAATGCCGCTGTACACTC...CAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CAA 90 bp | CCGAGGGCCGGAAGAGTGGCTGGGGCTCTCAGGCCTGCCTGCGAGTCTTGGTGTATGTCGTCGACCTCTTaGTCCATACTCTCTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRAGRVAGALRPACESWCMSSTS*SILSKS Trigger: GGACTTAGAGAGTATGGACAAAGAGGTCGACGACAT...ACACCAAGACTCGCAGGCAGGCCTGAGAGCCCCAGCCACTCTTCCGGCCCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CAA 90 bp | AATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGTCATTTAGTTTCCTCTaGTGGCCTCTGGGCCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: NQELQVICRSAEGRKSGWSFSFL*WPLGPR Trigger: GCGTGGGCCCAGAGGCCACAAGAGGAAACTAAATGA...CCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS TCA 90 bp | GCAGCTGGGTCAGGTCCTGGCCACACTCGGCACACAGGCCCTTCATaGCAACAGGATGGCTGCATCCTTCCAATCTCACCAGAAGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAGSGPGHTRHTGPS*QQDGCILPISPEVL Trigger: GAGCACTTCTGGTGAGATTGGAAGGATGCAGCCATCCTGTTGTCATGAAGGGCCTGTGTGCCGAGTGTGGCCAGGACCTGACCCAGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 90 bp | GGCACACTGTGCACCATGGAAACCGTCGCTGTGGAAAGGGGGACCTaGTGCCTTCCATTTTTACTCTGCAGCTGGGTCAGGTCCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTLCTMETVAVERGT*CLPFLLCSWVRSWP Trigger: TGGCCAGGACCTGACCCAGCTGCAGAGTAAAAATGGAAGGCAGCAGGTCCCCCTTTCCACAGCGACGGTTTCCATGGTGCACAGTGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 90 bp | GCTGGCAGGAGAGGCCCGAGTGAGGGGCCAGGCTTCCTTCTCATCTaGTTTACTGGGAAAAACTCCTGGCACAGCCTCACCACCATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGRRGPSEGPGFLLI*FTGKNSWHSLTTIE Trigger: CTCAATGGTGGTGAGGCTGTGCCAGGAGTTTTTCCCAGTAAAGCAGATGAGAAGGAAGCCTGGCCCCTCACTCGGGCCTCTCCTGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 90 bp | GGGACCTGCTGCCTTCCATTTTTACTCTGCAGCTGGGTCAGGTCCTaGCCACACTCGGCACACAGGCCCTTCATGACAACAGGATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTCCLPFLLCSWVRS*PHSAHRPFMTTGWL Trigger: CAGCCATCCTGTTGTCATGAAGGGCCTGTGTGCCGAGTGTGGCCAGGACCTGACCCAGCTGCAGAGTAAAAATGGAAGGCAGCAGGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | GAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGCTCTCTCCTGCTCATaGTCTTGGTCTTCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESGTPGHLQVRRGPEEWLALSCS*SWSSGF Trigger: GAAGCCAGAAGACCAAGACAATGAGCAGGAGAGAGC...CAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS GCA 90 bp | ACACTGTGCACCATGGAAACCGTCGCTGTGGAAAGGGGGACCTGCTaGCTTCCATTTTTACTCTGCAGCTGGGTCAGGTCCTGGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: TLCTMETVAVERGTC*LPFLLCSWVRSWPH Trigger: GTGTGGCCAGGACCTGACCCAGCTGCAGAGTAAAAATGGAAGGCAGCAGGTCCCCCTTTCCACAGCGACGGTTTCCATGGTGCACAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | GAGGGGCCAGGCTTCCTTCTCATCTGCTTTACTGGGAAAAACTCCTaGCACAGCCTCACCACCATTGAGCTCTCGGGAGGCCTTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGPGFLLICFTGKNS*HSLTTIELSGGLPK Trigger: CTTGGGAAGGCCTCCCGAGAGCTCAATGGTGGTGAGGCTGTGCCAGGAGTTTTTCCCAGTAAAGCAGATGAGAAGGAAGCCTGGCCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | TGCAGGGCTGTTATCCCTATGTGTGCGGGTATCGTCATCTATGAGTaGGAAGAGCTGCTCCTCCACCTTGTCCCAGCGCTCCAGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CRAVIPMCAGIVIYE*EELLLHLVPALQAA Trigger: AGCTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCTCTTCCCACTCATAGATGACGATACCCGCACACATAGGGATAACAGCCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | CTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCAGGCTGCTCTCCATCTaGAGATTCTGGCAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNQELQVICRSAEGRKSGRLLSI*RFWQLF Trigger: GAAGAGTTGCCAGAATCTCAAGATGGAGAGCAGCCT...GCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CAA 90 bp | GCTGCAGACAGGGACCTGAATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGCTCGGACATACTGGGTaGTCGCTTTCTTCTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AADRDLNQELQVICRSAELGHTG*SLSSSR Trigger: CCTGCTAGAAGAAAGCGACAACCCAGTATGTCCGAG...CTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATTCAGGTCCCTGTCTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS TCA 90 bp | TGGTCATCGTCGTCTGTGTCCTCTTCCTCTTCCTCCCCGACACTCTaGTCTAGGGACTCGCCTGCAGTGACACCTGACTGCTCACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSSSSVSSSSSSPTL*SRDSPAVTPDCSLF Trigger: GAACAGTGAGCAGTCAGGTGTCACTGCAGGCGAGTCCCTAGATCAGAGTGTCGGGGAGGAAGAGGAAGAGGACACAGACGACGATGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 90 bp | AGTTTCTCAGCTTGCTCAGAGCTCACCATCAACTCCGGCACACTGTaGACCATGGAAACCGTCGCTGTGGAAAGGGGGACCTGCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFSACSELTINSGTL*TMETVAVERGTCCL Trigger: AAGGCAGCAGGTCCCCCTTTCCACAGCGACGGTTTCCATGGTGCACAGTGTGCCGGAGTTGATGGTGAGCTCTGAGCAAGCTGAGAAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 90 bp | TTATCCCTATGTGTGCGGGTATCGTCATCTATGAGTGGGAAGAGCTaGTCCTCCACCTTGTCCCAGCGCTCCAGGCAGCTCCACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSLCVRVSSSMSGKS*SSTLSQRSRQLHSQ Trigger: TTGGCTGTGGAGCTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCTCTTCCCACTCATAGATGACGATACCCGCACACATAGGGATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | TCACCATCAACTCCGGCACACTGTGCACCATGGAAACCGTCGCTGTaGAAAGGGGGACCTGCTGCCTTCCATTTTTACTCTGCAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSTPAHCAPWKPSL*KGGPAAFHFYSAAG Trigger: CCCAGCTGCAGAGTAAAAATGGAAGGCAGCAGGTCCCCCTTTCCACAGCGACGGTTTCCATGGTGCACAGTGTGCCGGAGTTGATGGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | AATCAGGAACTCCAGGTCATCTGCAGGTCCGCCGAGGGCCGGAAGAGTGGCTGGCTCCTGCTCATTGTCTaGGTCTTCTGGCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NQELQVICRSAEGRKSGWLLLIV*VFWLLL Trigger: AAGAAGAAGCCAGAAGACCAAGACAATGAGCAGGAG...CCAGCCACTCTTCCGGCCCTCGGCGGACCTGCAGATGACCTGGAGTTCCTGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CAA 90 bp | TCCACGCTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCTCGGACATACTGGGTaGTCGCTTTCTTCTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STLTMRGPVELFGITHQLLGHTG*SLSSSR Trigger: CCTGCTAGAAGAAAGCGACAACCCAGTATGTCCGAG...GAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAGCGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS GCA 90 bp | CCTGCGATGGTGTGGGCATACAGACGGCTGCCGAAGGTGAAAACGTaGAGCTCATACAGCTTGGCGATTTTCTCCAGGAAATCCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAMVWAYRRLPKVKT*SSYSLAIFSRKSLQ Trigger: CTGCAAGGATTTCCTGGAGAAAATCGCCAAGCTGTATGAGCTGCACGTTTTCACCTTCGGCAGCCGTCTGTATGCCCACACCATCGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 90 bp | CTGAGTTTCCCGGGCTGCAGGGGGTGCATTCACATCACCTGTGCCTaGGAAGTAGACGTACTTCTTCACAGTTATGAGGTTAGGGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LSFPGCRGCIHITCA*EVDVLLHSYEVRGE Trigger: TTCGCCCCTAACCTCATAACTGTGAAGAAGTACGTCTACTTCCCAGGCACAGGTGATGTGAATGCACCCCCTGCAGCCCGGGAAACTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | CGAACCTCGGGACCAGGATGGGCCTTGGAATGGATGGGTGTTGGATaGAACAAGGCTGTTGGAAGCACACTGTGTCTGTCTGGAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RTSGPGWALEWMGVG*NKAVGSTLCLSGKT Trigger: AGTCTTTCCAGACAGACACAGTGTGCTTCCAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAGGCCCATCCTGGTCCCGAGGTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | GATCCGAACCTCGGGACCAGGATGGGCCTTGGAATGGATGGGTGTTaGATGGAACAAGGCTGTTGGAAGCACACTGTGTCTGTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DPNLGTRMGLGMDGC*MEQGCWKHTVSVWK Trigger: TTTCCAGACAGACACAGTGTGCTTCCAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAGGCCCATCCTGGTCCCGAGGTTCGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | TCTCAGGCCTGCCTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGGAGTGTACAGCGGCATaGCCTCGGACATACTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SQACLRVLVSCTHICTLLECTAA*PRTYWV Trigger: AACCCAGTATGTCCGAGGCAATGCCGCTGTACACTC...CAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS TCA 90 bp | CCAGAAAGCCTGCGATGGTGTGGGCATACAGACGGCTGCCGAAGGTaGAAACGTGCAGCTCATACAGCTTGGCGATTTTCTCCAGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PESLRWCGHTDGCRR*KRAAHTAWRFSPGN Trigger: ATTTCCTGGAGAAAATCGCCAAGCTGTATGAGCTGCACGTTTTCACCTTCGGCAGCCGTCTGTATGCCCACACCATCGCAGGCTTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | CGTGGCGTGATAGTGCTCGCGAGTCTTTTCCACAGGAAAGTTTGTTaGGTGCAGCCCACTGAATATCACAGCCACATCTGCGAGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGVIVLASLFHRKVC*VQPTEYHSHICEHL Trigger: AAGGTGCTCGCAGATGTGGCTGTGATATTCAGTGGGCTGCACCCAACAAACTTTCCTGTGGAAAAGACTCGCGAGCACTATCACGCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | AGTCATAGATCCGAACCTCGGGACCAGGATGGGCCTTGGAATGGATaGGTGTTGGATGGAACAAGGCTGTTGGAAGCACACTGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SHRSEPRDQDGPWNG*VLDGTRLLEAHCVC Trigger: ACAGACACAGTGTGCTTCCAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAGGCCCATCCTGGTCCCGAGGTTCGGATCTATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | TCTCAGGCCTGCCTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGGCGAGCACCTTGCTCTaGAGCTCTGGCACAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQACLRVLVSCTHICTLLASTLL*SSGTIF Trigger: GAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGC...CAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | CTCACCATGAGAGGCCCCGTTGAGCTCTTTGGCATCACACACCAACTCCTCAGAGATGGAACAAGGCTGTaGGAAGCACACTGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTMRGPVELFGITHQLLRDGTRL*EAHCVC Trigger: ACAGACACAGTGTGCTTCCAACAGCCTTGTTCCATC...TCTGAGGAGTTGGTGTGTGATGCCAAAGAGCTCAACGGGGCCTCTCATGGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | CTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCAGCTGCTCCTCCACCTaGTCCCAGCGCTCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSKSYWVPSPHTKYAIAFSCSST*SQRSRQ Trigger: CTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCT...GAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | TCTCAGGCCTGCCTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGAGGCTGCTCTCCATCTaGAGATTCTGGCAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQACLRVLVSCTHICTLLRLLSI*RFWQLF Trigger: GAAGAGTTGCCAGAATCTCAAGATGGAGAGCAGCCT...CAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGCAGGCCTGAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CAA 90 bp | CTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAGCCTTCCCAAGGCCATaGCTGTGCTCCACCCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRVLVSCTHICTLLFYLKAFPRP*LCSTPG Trigger: TCCCGGGGTGGAGCACAGCAATGGCCTTGGGAAGGC...TTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTAACATCTGCGAGCACCTaGCTCTTGAGCTCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLTSAST*LLSSGT Trigger: TGTGCCAGAGCTCAAGAGCAAGGTGCTCGCAGATGT...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 90 bp | ATGGAACAAGGCTGTTGGAAGCACACTGTGTCTGTCTGGAAAGACTaGAGGGCTGTTATCCCTATGTGTGCGGGTATCGTCATCTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: MEQGCWKHTVSVWKD*RAVIPMCAGIVIYE Trigger: CTCATAGATGACGATACCCGCACACATAGGGATAACAGCCCTGCAGTCTTTCCAGACAGACACAGTGTGCTTCCAACAGCCTTGTTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | AAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGACCACATGTAGGTGTTaGCACTCCTGTGCCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KNFTSDFLGQYRPPFVTLTTCRC*HSCAWR Trigger: GCGCCAGGCACAGGAGTGCAAACACCTACATGTGGT...CAGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS TCA 90 bp | AGTGCTGCTCAGTCGTATGAATCAGGGTCTGGTCCAAGTCAACCATaGGAACCAGTTTTCTGTTTCGATGTAGTCGCTGCTGATCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAAQSYESGSGPSQP*EPVFCFDVVAADPL Trigger: GAGAGGATCAGCAGCGACTACATCGAAACAGAAAACTGGTTCTCATGGTTGACTTGGACCAGACCCTGATTCATACGACTGAGCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS TCA 90 bp | AAGATGCCTTTGTTGGACATCTGGGGACAGTGCTGCTCAGTCGTATaGATCAGGGTCTGGTCCAAGTCAACCATGAGAACCAGTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KMPLLDIWGQCCSVV*IRVWSKSTMRTSFL Trigger: CAGAAAACTGGTTCTCATGGTTGACTTGGACCAGACCCTGATTCATACGACTGAGCAGCACTGTCCCCAGATGTCCAACAAAGGCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 90 bp | AGGAAAGTTTGTTGGGTGCAGCCCACTGAATATCACAGCCACATCTaGGAGCACCTTGCTCTTGAGCTCTGGCACAATTTTCCGTATATC | + |
|
Preference number: 5 (lower is better) Translates to: RKVCWVQPTEYHSHI*EHLALELWHNFPYI Trigger: GATATACGGAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGCAGATGTGGCTGTGATATTCAGTGGGCTGCACCCAACAAACTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 90 bp | TGTCTTGGTCTTCTGGCTTCTTCTTCTCGATGTCACTGTCATCACTaGCCTCTCCAAGGATGTCGTCGACCTCTTTGTCCATACTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CLGLLASSSRCHCHH*PLQGCRRPLCPYSL Trigger: TAGAGAGTATGGACAAAGAGGTCGACGACATCCTTGGAGAGGGCAGTGATGACAGTGACATCGAGAAGAAGAAGCCAGAAGACCAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS CCA 90 bp | ACTGAATATCACAGCCACATCTGCGAGCACCTTGCTCTTGAGCTCTaGCACAATTTTCCGTATATCTGGAGCTTCCTCAAGCTCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TEYHSHICEHLALEL*HNFPYIWSFLKLLV Trigger: AACAAGGAGCTTGAGGAAGCTCCAGATATACGGAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGCAGATGTGGCTGTGATATTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTACTCTTCACCAAACATTaGCTGCTGATGTGGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLLFTKH*LLMWLN Trigger: GTTCAGCCACATCAGCAGCAAATGTTTGGTGAAGAG...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036229.13 ENSMUST00000161003.2 |
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| CDS-3UTR CAA 90 bp | CCTCACACTAAATATGCTATAGCATTCAAAGGCAAGCCCCCAAGGCCCTCACTACTCCTGCTCATTGTCTaGGTCTTCTGGCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PHTKYAIAFKGKPPRPSLLLLIV*VFWLLL Trigger: AAGAAGAAGCCAGAAGACCAAGACAATGAGCAGGAG...TAGTGAGGGCCTTGGGGGCTTGCCTTTGAATGCTATAGCATATTTAGTGTGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCTCATTTAGTTTCCTCTaGTGGCCTCTGGGCCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LSKSYWVPSPHTKYAIAFSFSFL*WPLGPR Trigger: GCGTGGGCCCAGAGGCCACAAGAGGAAACTAAATGA...GAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CAA 90 bp | TTGCTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATCATTTAGTTTCCTCTaGTGGCCTCTGGGCCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSKSYWVPSPHTKYAIASFSFL*WPLGPR Trigger: GCGTGGGCCCAGAGGCCACAAGAGGAAACTAAATGA...TGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS TCA 90 bp | AAGTCAACCATGAGAACCAGTTTTCTGTTTCGATGTAGTCGCTGCTaGTCCTCTCTTCCTAGTTTCTCAGCTTGCTCAGAGCTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: KSTMRTSFLFRCSRC*SSLPSFSACSELTI Trigger: GATGGTGAGCTCTGAGCAAGCTGAGAAACTAGGAAGAGAGGATCAGCAGCGACTACATCGAAACAGAAAACTGGTTCTCATGGTTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 90 bp | TGCGAGCACCTTGCTCTTGAGCTCTGGCACAATTTTCCGTATATCTaGAGCTTCCTCAAGCTCCTTGTTGAGGTATCTGTCATACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CEHLALELWHNFPYI*SFLKLLVEVSVILC Trigger: ACAAAGTATGACAGATACCTCAACAAGGAGCTTGAGGAAGCTCCAGATATACGGAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS-3UTR CAA 90 bp | CTCTCTAAATCTTACTGGGTCCCCAGTCCTCACACTAAATATGCTATAGCATTCGCTCTCTCCTGCTCATaGTCTTGGTCTTCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSKSYWVPSPHTKYAIAFALSCS*SWSSGF Trigger: GAAGCCAGAAGACCAAGACAATGAGCAGGAGAGAGC...GAATGCTATAGCATATTTAGTGTGAGGACTGGGGACCCAGTAAGATTTAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGCTCTTCACCAAACATTaGCTGCTGATGTGGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KNFTSDFLGQYRPPFVTLLFTKH*LLMWLN Trigger: GTTCAGCCACATCAGCAGCAAATGTTTGGTGAAGAG...CAGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036229.13 ENSMUST00000161003.2 |
||
| CDS-3UTR CAA 90 bp | AAAAACTTTACATCAGATTTCTTAGGGCAGTACAGGCCGCCTTTCGTCACACTGATGTCGTCGACCTCTTaGTCCATACTCTCTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KNFTSDFLGQYRPPFVTLMSSTS*SILSKS Trigger: GGACTTAGAGAGTATGGACAAAGAGGTCGACGACAT...CAGTGTGACGAAAGGCGGCCTGTACTGCCCTAAGAAATCTGATGTAAAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
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| CDS-3UTR CAA 90 bp | CTGCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAATGGAATGGATGGGTGTaGGATGGAACAAGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRVLVSCTHICTLLFYLKWNGWV*DGTRLL Trigger: CAACAGCCTTGTTCCATCCAACACCCATCCATTCCA...TTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 90 bp | CTGGCACAATTTTCCGTATATCTGGAGCTTCCTCAAGCTCCTTGTTaGGGTATCTGTCATACTTTGTGTAATAGTCAGTGTGTACTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAQFSVYLELPQAPC*GICHTLCNSQCVLG Trigger: TCCGAGTACACACTGACTATTACACAAAGTATGACAGATACCTCAACAAGGAGCTTGAGGAAGCTCCAGATATACGGAAAATTGTGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS-3UTR CAA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATAGGCTGCTCTCCATCTaGAGATTCTGGCAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNRLLSI*RFWQLF Trigger: GAAGAGTTGCCAGAATCTCAAGATGGAGAGCAGCCT...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS-3UTR CAA 90 bp | GCGAGTCTTGGTGTCCTGTACACACATATGTACACTGCTGTTTTACTTAAAAATCTCCTGCTCATTGTCTaGGTCTTCTGGCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASLGVLYTHMYTAVLLKNLLLIV*VFWLLL Trigger: AAGAAGAAGCCAGAAGACCAAGACAATGAGCAGGAG...ATTTTTAAGTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS GCA 72 bp | CCCTGCGGGCTGCGCGGAGGCTGCGGTTTCGCACACTaGCAGCACCGAGCCGATGCGCACGGTCGCGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PCGLRGGCGFAH*QHRADAHGRAR Trigger: GCGGGCGCGACCGTGCGCATCGGCTCGGTGCTGGCAGTGTGCGAAACCGCAGCCTCCGCGCAGCCCGCAGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | GCGAGCCGGTGCCGGCCCTGCGGGCTGCGCGGAGGCTaGGGTTTCGCACACTGCCAGCACCGAGCCGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: ASRCRPCGLRGG*GFAHCQHRADA Trigger: CGCATCGGCTCGGTGCTGGCAGTGTGCGAAACCGCAGCCTCCGCGCAGCCCGCAGGGCCGGCACCGGCTCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | AGGCTGCGGTTTCGCACACTGCCAGCACCGAGCCGATaGGCACGGTCGCGCCCGCCGCCACCTTCCACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLRFRTLPAPSR*ARSRPPPPSTP Trigger: TGGAGTGGAAGGTGGCGGCGGGCGCGACCGTGCGCATCGGCTCGGTGCTGGCAGTGTGCGAAACCGCAGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | TTGAGCTCTCGGGAGGCCTTCCCAAGGCCATTGCTGTaGTCCACCCCGGGAGCAGGCCTGCCGTCCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSREAFPRPLL*STPGAGLPSSG Trigger: CCCTGAGGACGGCAGGCCTGCTCCCGGGGTGGAGCACAGCAATGGCCTTGGGAAGGCCTCCCGAGAGCTCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CAA 72 bp | CCACCATTGAGCTCTCGGGAGGCCTTCCCAAGGCCATaGCTGTGCTCCACCCCGGGAGCAGGCCTGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPLSSREAFPRP*LCSTPGAGLPS Trigger: GGACGGCAGGCCTGCTCCCGGGGTGGAGCACAGCAATGGCCTTGGGAAGGCCTCCCGAGAGCTCAATGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CAA 90 bp | ACAGCCTCACCACCATTGAGCTCTCGGGAGGCCTTCCCAAGGCCATaGCTGTGCTCCACCCCGGGAGCAGGCCTGCCGTCCTCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TASPPLSSREAFPRP*LCSTPGAGLPSSGS Trigger: GGACCCTGAGGACGGCAGGCCTGCTCCCGGGGTGGAGCACAGCAATGGCCTTGGGAAGGCCTCCCGAGAGCTCAATGGTGGTGAGGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 72 bp | GGGCCCACGCATGCCAGGGGTGCTCCTCTCGCCAGATaGGGGCAAGCCTACAGGCTGCTCTCTTCGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPTHARGAPLAR*GQAYRLLSSDP Trigger: GGGATCCGAAGAGAGCAGCCTGTAGGCTTGCCCTCATCTGGCGAGAGGAGCACCCCTGGCATGCGTGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS GCA 72 bp | GTGCTCCTCTCGCCAGATGAGGGCAAGCCTACAGGCTaGTCTCTTCGGATCCCTGGAGCCCGGGGCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLLSPDEGKPTG*SLRIPGARGFL Trigger: CAGGAAGCCCCGGGCTCCAGGGATCCGAAGAGAGCAGCCTGTAGGCTTGCCCTCATCTGGCGAGAGGAGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS CCA 72 bp | TCCAATCTCACCAGAAGTGCTCCAGGGGCCACCACCTaGCCTGGCTGCGCACACAGTTCACGGACCACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SNLTRSAPGATT*PGCAHSSRTTP Trigger: CGGCGTGGTCCGTGAACTGTGTGCGCAGCCAGGCCAGGTGGTGGCCCCTGGAGCACTTCTGGTGAGATTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 72 bp | CCCAGGCCACAGAGGCTGTCCCGTTCACCCTCCTCCTaGGTGTCCAGGTCTGACCCTTTGTCATGGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRPQRLSRSPSS*VSRSDPLSWGW Trigger: CCACCCCCATGACAAAGGGTCAGACCTGGACACTCAGGAGGAGGGTGAACGGGACAGCCTCTGTGGCCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 72 bp | AGGTCAAAGTCCAAATCCTGGGTGGCGGCATCACCCTaGGTGGGCTGCACCCCTGGCGTTGTCCGACCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RSKSKSWVAASP*VGCTPGVVRPS Trigger: GGATGGTCGGACAACGCCAGGGGTGCAGCCCACTCAGGGTGATGCCGCCACCCAGGATTTGGACTTTGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 72 bp | CGCACCTTCTCTGTACCAGCCCGTGCTGCAATGAGGTaGGTGGCCCTGTCTGGAGCATCAGGGCTCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RTFSVPARAAMR*VALSGASGLST Trigger: GGTGCTGAGCCCTGATGCTCCAGACAGGGCCACTCACCTCATTGCAGCACGGGCTGGTACAGAGAAGGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 72 bp | CCTGGCGCACCTTCTCTGTACCAGCCCGTGCTGCAATaGGGTGAGTGGCCCTGTCTGGAGCATCAGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PGAPSLYQPVLQ*GEWPCLEHQGS Trigger: TGAGCCCTGATGCTCCAGACAGGGCCACTCACCTCATTGCAGCACGGGCTGGTACAGAGAAGGTGCGCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | CTGTGCCTGGCGCACCTTCTCTGTACCAGCCCGTGCTaGAATGAGGTGAGTGGCCCTGTCTGGAGCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LCLAHLLCTSPC*NEVSGPVWSIR Trigger: CCTGATGCTCCAGACAGGGCCACTCACCTCATTGCAGCACGGGCTGGTACAGAGAAGGTGCGCCAGGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | CAAGACACAGGGAGCTCTGGAGCTTCAGTTGGCTCGTaGCCACTAGAGCTGCTGGCAGGAGAGGCCCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QDTGSSGASVGS*PLELLAGEARV Trigger: CACTCGGGCCTCTCCTGCCAGCAGCTCTAGTGGCCACGAGCCAACTGAAGCTCCAGAGCTCCCTGTGTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CAA 90 bp | GTGCGGGTATCGTCATCTATGAGTGGGAAGAGCTGCTCCTCCACCTaGTCCCAGCGCTCCAGGCAGCTCCACAGCCAATCAGGGCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: VRVSSSMSGKSCSST*SQRSRQLHSQSGLT Trigger: GGTCAGCCCTGATTGGCTGTGGAGCTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCTCTTCCCACTCATAGATGACGATACCCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 72 bp | GCTGTCCCGTTCACCCTCCTCCTGAGTGTCCAGGTCTaGCCCTTTGTCATGGGGGTGGATGCTAGGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AVPFTLLLSVQV*PFVMGVDARPR Trigger: TCTGGGCCTAGCATCCACCCCCATGACAAAGGGTCAGACCTGGACACTCAGGAGGAGGGTGAACGGGACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | GGAGCCCGGGGCTTCCTGGGCTTCGGGGCTCTCTCCTaGTCATTGTCTTGGTCTTCTGGCTTCTTCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GARGFLGFGALS*SLSWSSGFFFS Trigger: CGAGAAGAAGAAGCCAGAAGACCAAGACAATGAGCAGGAGAGAGCCCCGAAGCCCAGGAAGCCCCGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS GCA 72 bp | CATTTAGTTTCCTCTTGTGGCCTCTGGGCCCACGCATaGCAGGGGTGCTCCTCTCGCCAGATGAGGGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HLVSSCGLWAHA*QGCSSRQMRAS Trigger: GCTTGCCCTCATCTGGCGAGAGGAGCACCCCTGGCATGCGTGGGCCCAGAGGCCACAAGAGGAAACTAAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS CCA 72 bp | CCACTCACAAGACACAGGGAGCTCTGGAGCTTCAGTTaGCTCGTGGCCACTAGAGCTGCTGGCAGGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLTRHRELWSFS*LVATRAAGRRG Trigger: GCCTCTCCTGCCAGCAGCTCTAGTGGCCACGAGCCAACTGAAGCTCCAGAGCTCCCTGTGTCTTGTGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | CTGACCTGCTGCTGCTCTCGCTGCTCTCGCTGTCGCTaGACAGGTCAAAGTCCAAATCCTGGGTGGCGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LTCCCSRCSRCR*TGQSPNPGWRH Trigger: ATGCCGCCACCCAGGATTTGGACTTTGACCTGTCCAGCGACAGCGAGAGCAGCGAGAGCAGCAGCAGGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | TCGCTGGCAGCGTCTTCCTCATTTAGTTTCCTCTTGTaGCCTCTGGGCCCACGCATGCCAGGGGTGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLAASSSFSFLL*PLGPRMPGVLL Trigger: GAGGAGCACCCCTGGCATGCGTGGGCCCAGAGGCCACAAGAGGAAACTAAATGAGGAAGACGCTGCCAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS CAA 90 bp | TCCAGGCAGCTCCACAGCCAATCAGGGCTGACCACATGTAGGTGTTaGCACTCCTGTGCCTGGCGCACCTTCTCTGTACCAGCCCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRQLHSQSGLTTCRC*HSCAWRTFSVPARA Trigger: AGCACGGGCTGGTACAGAGAAGGTGCGCCAGGCACAGGAGTGCAAACACCTACATGTGGTCAGCCCTGATTGGCTGTGGAGCTGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 72 bp | TACAGCTTGGCGATTTTCTCCAGGAAATCCTTGCAGTaGGGCCTCAGGCGCGTGTGCAGCATGGGCTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: YSLAIFSRKSLQ*GLRRVCSMGSP Trigger: GGGGGAGCCCATGCTGCACACGCGCCTGAGGCCTCACTGCAAGGATTTCCTGGAGAAAATCGCCAAGCTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | GCTTGCTCAGAGCTCACCATCAACTCCGGCACACTGTaGACCATGGAAACCGTCGCTGTGGAAAGGGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: ACSELTINSGTL*TMETVAVERGT Trigger: GGTCCCCCTTTCCACAGCGACGGTTTCCATGGTGCACAGTGTGCCGGAGTTGATGGTGAGCTCTGAGCAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 72 bp | TCTGGGATTCCGTTTCAGCCTCTTTCCGGTCCACACTaGCATTGCCCAGGCCACAGAGGCTGTCCCGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGIPFQPLSGPH*HCPGHRGCPVH Trigger: GTGAACGGGACAGCCTCTGTGGCCTGGGCAATGGCAGTGTGGACCGGAAAGAGGCTGAAACGGAATCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | TGTGTGCGGGTATCGTCATCTATGAGTGGGAAGAGCTaGTCCTCCACCTTGTCCCAGCGCTCCAGGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CVRVSSSMSGKS*SSTLSQRSRQL Trigger: GAGCTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCTCTTCCCACTCATAGATGACGATACCCGCACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 72 bp | AACAGCTCTGAAGGAGGAAGGCTCTCCATGGTTAAGTaGGGCACTGGAGGGAGCTGGTGCAGAACCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NSSEGGRLSMVK*GTGGSWCRTLG Trigger: CCCCAGGGTTCTGCACCAGCTCCCTCCAGTGCCCCACTTAACCATGGAGAGCCTTCCTCCTTCAGAGCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 72 bp | TGTCCGACCATCCCACTCACAAGACACAGGGAGCTCTaGAGCTTCAGTTGGCTCGTGGCCACTAGAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPTIPLTRHREL*SFSWLVATRAA Trigger: AGCAGCTCTAGTGGCCACGAGCCAACTGAAGCTCCAGAGCTCCCTGTGTCTTGTGAGTGGGATGGTCGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CAA 72 bp | TCGTCATCTATGAGTGGGAAGAGCTGCTCCTCCACCTaGTCCCAGCGCTCCAGGCAGCTCCACAGCCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSMSGKSCSST*SQRSRQLHSQS Trigger: TGATTGGCTGTGGAGCTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCTCTTCCCACTCATAGATGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CAA 90 bp | TCATCTGCTTTACTGGGAAAAACTCCTGGCACAGCCTCACCACCATaGAGCTCTCGGGAGGCCTTCCCAAGGCCATTGCTGTGCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SSALLGKTPGTASPP*SSREAFPRPLLCST Trigger: GGTGGAGCACAGCAATGGCCTTGGGAAGGCCTCCCGAGAGCTCAATGGTGGTGAGGCTGTGCCAGGAGTTTTTCCCAGTAAAGCAGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 72 bp | TACTGGGAAAAACTCCTGGCACAGCCTCACCACCATTaGGCTCTCGGGAGGCCTTCCCAAGGCCATTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: YWEKLLAQPHHH*ALGRPSQGHCC Trigger: ACAGCAATGGCCTTGGGAAGGCCTCCCGAGAGCTCAATGGTGGTGAGGCTGTGCCAGGAGTTTTTCCCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | ACCATGGAAACCGTCGCTGTGGAAAGGGGGACCTGCTaGCTTCCATTTTTACTCTGCAGCTGGGTCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TMETVAVERGTC*LPFLLCSWVRS Trigger: GGACCTGACCCAGCTGCAGAGTAAAAATGGAAGGCAGCAGGTCCCCCTTTCCACAGCGACGGTTTCCATGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | TGCACCATGGAAACCGTCGCTGTGGAAAGGGGGACCTaGTGCCTTCCATTTTTACTCTGCAGCTGGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CTMETVAVERGT*CLPFLLCSWVR Trigger: CCTGACCCAGCTGCAGAGTAAAAATGGAAGGCAGCAGGTCCCCCTTTCCACAGCGACGGTTTCCATGGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS GCA 72 bp | GCTCATACAGCTTGGCGATTTTCTCCAGGAAATCCTTaGAGTGAGGCCTCAGGCGCGTGTGCAGCATGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHTAWRFSPGNP*SEASGACAAWA Trigger: AGCCCATGCTGCACACGCGCCTGAGGCCTCACTGCAAGGATTTCCTGGAGAAAATCGCCAAGCTGTATGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | CCTCATCATCGTTGCTGGACTCCCCGCTGGACTCGCTaGCAGCGTCTTCCTCATTTAGTTTCCTCTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PHHRCWTPRWTR*QRLPHLVSSCG Trigger: GCCACAAGAGGAAACTAAATGAGGAAGACGCTGCCAGCGAGTCCAGCGGGGAGTCCAGCAACGATGATGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036229.13 ENSMUST00000160434.3 ENSMUST00000161003.2 |
||
| CDS CAA 72 bp | CTCCACAGCCAATCAGGGCTGACCACATGTAGGTGTTaGCACTCCTGTGCCTGGCGCACCTTCTCTGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: LHSQSGLTTCRC*HSCAWRTFSVP Trigger: TGGTACAGAGAAGGTGCGCCAGGCACAGGAGTGCAAACACCTACATGTGGTCAGCCCTGATTGGCTGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CAA 72 bp | CCTCGGGACCAGGATGGGCCTTGGAATGGATGGGTGTaGGATGGAACAAGGCTGTTGGAAGCACACTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRDQDGPWNGWV*DGTRLLEAHCV Trigger: GACACAGTGTGCTTCCAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAGGCCCATCCTGGTCCCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | CCACACTCGGCACACAGGCCCTTCATGACAACAGGATaGCTGCATCCTTCCAATCTCACCAGAAGTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PHSAHRPFMTTG*LHPSNLTRSAP Trigger: TGGAGCACTTCTGGTGAGATTGGAAGGATGCAGCCATCCTGTTGTCATGAAGGGCCTGTGTGCCGAGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | ACTCCGGCACACTGTGCACCATGGAAACCGTCGCTGTaGAAAGGGGGACCTGCTGCCTTCCATTTTTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: TPAHCAPWKPSL*KGGPAAFHFYS Trigger: AGAGTAAAAATGGAAGGCAGCAGGTCCCCCTTTCCACAGCGACGGTTTCCATGGTGCACAGTGTGCCGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | GGCTTCCTTCTCATCTGCTTTACTGGGAAAAACTCCTaGCACAGCCTCACCACCATTGAGCTCTCGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GFLLICFTGKNS*HSLTTIELSGG Trigger: GCCTCCCGAGAGCTCAATGGTGGTGAGGCTGTGCCAGGAGTTTTTCCCAGTAAAGCAGATGAGAAGGAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | GTTATCCCTATGTGTGCGGGTATCGTCATCTATGAGTaGGAAGAGCTGCTCCTCCACCTTGTCCCAGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VIPMCAGIVIYE*EELLLHLVPAL Trigger: GAGCGCTGGGACAAGGTGGAGGAGCAGCTCTTCCCACTCATAGATGACGATACCCGCACACATAGGGATAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | CTCGGGACCAGGATGGGCCTTGGAATGGATGGGTGTTaGATGGAACAAGGCTGTTGGAAGCACACTGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGTRMGLGMDGC*MEQGCWKHTVS Trigger: AGACACAGTGTGCTTCCAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAGGCCCATCCTGGTCCCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CAA 90 bp | AGATCCGAACCTCGGGACCAGGATGGGCCTTGGAATGGATGGGTGTaGGATGGAACAAGGCTGTTGGAAGCACACTGTGTCTGTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RSEPRDQDGPWNGWV*DGTRLLEAHCVCLE Trigger: TTCCAGACAGACACAGTGTGCTTCCAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAGGCCCATCCTGGTCCCGAGGTTCGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS TCA 72 bp | CTGCGATGGTGTGGGCATACAGACGGCTGCCGAAGGTaGAAACGTGCAGCTCATACAGCTTGGCGATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LRWCGHTDGCRR*KRAAHTAWRFS Trigger: AGAAAATCGCCAAGCTGTATGAGCTGCACGTTTTCACCTTCGGCAGCCGTCTGTATGCCCACACCATCGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | CCGGGCTGCAGGGGGTGCATTCACATCACCTGTGCCTaGGAAGTAGACGTACTTCTTCACAGTTATGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGCRGCIHITCA*EVDVLLHSYEV Trigger: AACCTCATAACTGTGAAGAAGTACGTCTACTTCCCAGGCACAGGTGATGTGAATGCACCCCCTGCAGCCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | TGTACTCGGACCAGGATCTCCTCGAGGTGTATCAAGTaGTCATCGTCGTCTGTGTCCTCTTCCTCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CTRTRISSRCIK*SSSSVSSSSSS Trigger: GGAGGAAGAGGAAGAGGACACAGACGACGATGACCACTTGATACACCTCGAGGAGATCCTGGTCCGAGTACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | GGACCAGGATGGGCCTTGGAATGGATGGGTGTTGGATaGAACAAGGCTGTTGGAAGCACACTGTGTCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPGWALEWMGVG*NKAVGSTLCLS Trigger: AGACAGACACAGTGTGCTTCCAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAGGCCCATCCTGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
||
| CDS CCA 72 bp | AGTCATAGATCCGAACCTCGGGACCAGGATGGGCCTTaGAATGGATGGGTGTTGGATGGAACAAGGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SHRSEPRDQDGP*NGWVLDGTRLL Trigger: CAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAGGCCCATCCTGGTCCCGAGGTTCGGATCTATGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 72 bp | GTGTGGGCATACAGACGGCTGCCGAAGGTGAAAACGTaGAGCTCATACAGCTTGGCGATTTTCTCCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: VWAYRRLPKVKT*SSYSLAIFSRK Trigger: TTTCCTGGAGAAAATCGCCAAGCTGTATGAGCTGCACGTTTTCACCTTCGGCAGCCGTCTGTATGCCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 72 bp | ATGATTTACTTTTCTCCTTGCCTGAGTTTCCCGGGCTaGAGGGGGTGCATTCACATCACCTGTGCCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: MIYFSPCLSFPG*RGCIHITCAWE Trigger: TTCCCAGGCACAGGTGATGTGAATGCACCCCCTGCAGCCCGGGAAACTCAGGCAAGGAGAAAAGTAAATCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 72 bp | TGCTCGCGAGTCTTTTCCACAGGAAAGTTTGTTGGGTaGAGCCCACTGAATATCACAGCCACATCTGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: CSRVFSTGKFVG*SPLNITATSAS Trigger: GCTCGCAGATGTGGCTGTGATATTCAGTGGGCTGCACCCAACAAACTTTCCTGTGGAAAAGACTCGCGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CAA 90 bp | GTTGGGTGCAGCCCACTGAATATCACAGCCACATCTGCGAGCACCTaGCTCTTGAGCTCTGGCACAATTTTCCGTATATCTGGAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VGCSPLNITATSAST*LLSSGTIFRISGAS Trigger: GGAAGCTCCAGATATACGGAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGCAGATGTGGCTGTGATATTCAGTGGGCTGCACCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CAA 90 bp | TGCAGCCCACTGAATATCACAGCCACATCTGCGAGCACCTTGCTCTaGAGCTCTGGCACAATTTTCCGTATATCTGGAGCTTCCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: CSPLNITATSASTLL*SSGTIFRISGASSS Trigger: GCTTGAGGAAGCTCCAGATATACGGAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGCAGATGTGGCTGTGATATTCAGTGGGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS TCA 72 bp | TTGTTGGACATCTGGGGACAGTGCTGCTCAGTCGTATaGATCAGGGTCTGGTCCAAGTCAACCATGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: LLDIWGQCCSVV*IRVWSKSTMRT Trigger: GGTTCTCATGGTTGACTTGGACCAGACCCTGATTCATACGACTGAGCAGCACTGTCCCCAGATGTCCAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS GCA 72 bp | TGTTGGGTGCAGCCCACTGAATATCACAGCCACATCTaGGAGCACCTTGCTCTTGAGCTCTGGCACAATTTT | + |
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Preference number: 6 (lower is better) Translates to: CWVQPTEYHSHI*EHLALELWHNF Trigger: AAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGCAGATGTGGCTGTGATATTCAGTGGGCTGCACCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 72 bp | CACAGCCACATCTGCGAGCACCTTGCTCTTGAGCTCTaGCACAATTTTCCGTATATCTGGAGCTTCCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: HSHICEHLALEL*HNFPYIWSFLK Trigger: CTTGAGGAAGCTCCAGATATACGGAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGCAGATGTGGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 72 bp | CTTGGAATGGATGGGTGTTGGATGGAACAAGGCTGTTaGAAGCACACTGTGTCTGTCTGGAAAGACTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LGMDGCWMEQGC*KHTVSVWKDCR Trigger: CCTGCAGTCTTTCCAGACAGACACAGTGTGCTTCCAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CAA 72 bp | CCTTGGAATGGATGGGTGTTGGATGGAACAAGGCTGTaGGAAGCACACTGTGTCTGTCTGGAAAGACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: PWNGWVLDGTRL*EAHCVCLERLQ Trigger: CTGCAGTCTTTCCAGACAGACACAGTGTGCTTCCAACAGCCTTGTTCCATCCAACACCCATCCATTCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 72 bp | ATAGTGCTCGCGAGTCTTTTCCACAGGAAAGTTTGTTaGGTGCAGCCCACTGAATATCACAGCCACATCTGC | + |
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Preference number: 6 (lower is better) Translates to: IVLASLFHRKVC*VQPTEYHSHIC Trigger: GCAGATGTGGCTGTGATATTCAGTGGGCTGCACCCAACAAACTTTCCTGTGGAAAAGACTCGCGAGCACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CAA 72 bp | CTGAATATCACAGCCACATCTGCGAGCACCTTGCTCTaGAGCTCTGGCACAATTTTCCGTATATCTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LNITATSASTLL*SSGTIFRISGA Trigger: AGCTCCAGATATACGGAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGCAGATGTGGCTGTGATATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CAA 72 bp | AGCCCACTGAATATCACAGCCACATCTGCGAGCACCTaGCTCTTGAGCTCTGGCACAATTTTCCGTATATCT | + |
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Preference number: 6 (lower is better) Translates to: SPLNITATSAST*LLSSGTIFRIS Trigger: AGATATACGGAAAATTGTGCCAGAGCTCAAGAGCAAGGTGCTCGCAGATGTGGCTGTGATATTCAGTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS TCA 72 bp | CAGTCGTATGAATCAGGGTCTGGTCCAAGTCAACCATaGGAACCAGTTTTCTGTTTCGATGTAGTCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QSYESGSGPSQP*EPVFCFDVVAA Trigger: AGCAGCGACTACATCGAAACAGAAAACTGGTTCTCATGGTTGACTTGGACCAGACCCTGATTCATACGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CCA 72 bp | CTTGCTCTTGAGCTCTGGCACAATTTTCCGTATATCTaGAGCTTCCTCAAGCTCCTTGTTGAGGTATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LALELWHNFPYI*SFLKLLVEVSV Trigger: GACAGATACCTCAACAAGGAGCTTGAGGAAGCTCCAGATATACGGAAAATTGTGCCAGAGCTCAAGAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS TCA 72 bp | CCACACATCTTCTCGGTCATCGATGATGCAAACCATTaGGTCTCCACAGGGGAAAAGATTTCTAAGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PHIFSVIDDANH*VSTGEKISKVS Trigger: GGAAACCTTAGAAATCTTTTCCCCTGTGGAGACTCAATGGTTTGCATCATCGATGACCGAGAAGATGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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| CDS CAA 72 bp | TCCATCTTGAGATTCTGGCAACTCTTCACCAAACATTaGCTGCTGATGTGGCTGAACAGCTCTTACAACCAG | + |
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Preference number: 6 (lower is better) Translates to: SILRFWQLFTKH*LLMWLNSSYNQ Trigger: CTGGTTGTAAGAGCTGTTCAGCCACATCAGCAGCAAATGTTTGGTGAAGAGTTGCCAGAATCTCAAGATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161003.2 |
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| CDS TCA 72 bp | TTTTCCGTATATCTGGAGCTTCCTCAAGCTCCTTGTTaGGGTATCTGTCATACTTTGTGTAATAGTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: FSVYLELPQAPC*GICHTLCNSQC Trigger: ACACTGACTATTACACAAAGTATGACAGATACCTCAACAAGGAGCTTGAGGAAGCTCCAGATATACGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036229.13 |
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