Pregenerated sensors for CTCFL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070495Ensembl transcript IDs: ENSMUST00000094287.10, ENSMUST00000179693.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGCTCGTCATTCCTGCAAGACGGAGGCAGGAGAATGGACAGTTTaGAGTGCAGCTGGACTCCAAATTGAGTTCAAATCCAGCCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: KARHSCKTEAGEWTV*SAAGLQIEFKSSLD Trigger: ATCCAGGCTGGATTTGAACTCAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGCAGGAATGACGAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR CCA 90 bp | CATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTaGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: HFYTLSQTLRTLCCV*ELISNWFLPPEATA Trigger: TGCTGTGGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCACTCTGAGAACACTGTaGTGTGTCTGGGAACTTATT | + |
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Preference number: 2 (lower is better) Translates to: RGRRISEFEASLVYRVSSTLRTL*CVWELI Trigger: AATAAGTTCCCAGACACAGCACAGTGTTCTCAGAGT...GGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAATGCTTGCAACAATGCCAGTGTAATTTCATAGCGGGCGAAGACTACAATGTCCCTGACTCATTCTaGGCACCTGCTAGGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SQCLQQCQCNFIAGEDYNVPDSF*APARAQ Trigger: CTGGGCCCTAGCAGGTGCCCAGAATGAGTCAGGGAC...ATTGTAGTCTTCGCCCGCTATGAAATTACACTGGCATTGTTGCAAGCATTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR-3UTR TCA 90 bp | CGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTCATGGAGAATGGACAGTTTaGAGTGCAGCTGGACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: RRLQLREDKPGLVVKARHGEWTV*SAAGLQ Trigger: TTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCC...ATGACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCTCGTCATTCCTGCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGACTCTGAGAACACTGTaGTGTGTCTGGGAACTTATT | + |
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Preference number: 2 (lower is better) Translates to: RLVIPARRRQENGQFEVQTLRTL*CVWELI Trigger: AATAAGTTCCCAGACACAGCACAGTGTTCTCAGAGT...CTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGCAGGAATGACGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCGTCATTCCTGCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGACACTGTGCTGTGTCTaGGAACTTATTTCTAACTGG | + |
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Preference number: 2 (lower is better) Translates to: RLVIPARRRQENGQFEVQTLCCV*ELISNW Trigger: CCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT...CTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGCAGGAATGACGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR CAA 90 bp | ATTGTTTCTACCAATTCATCTTTCCGCAGCATTAAGATTCTCAGGTaGACTTTAGAATTCATTGAAAGCATCGTGGTAGCTTTAAATGTC | + |
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Preference number: 2 (lower is better) Translates to: IVSTNSSFRSIKILR*TLEFIESIVVALNV Trigger: GACATTTAAAGCTACCACGATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAAAGATGAATTGGTAGAAACAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR CCA 72 bp | GGAAGTTGTGTGGGGGCTGGGGGTATGGCCTGGTGGTaGGGCACTTGTCTAAATTGTGCCAAGCCCTGGGTT | + |
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Preference number: 3 (lower is better) Translates to: GSCVGAGGMAWW*GTCLNCAKPWV Trigger: AACCCAGGGCTTGGCACAATTTAGACAAGTGCCCCACCACCAGGCCATACCCCCAGCCCCCACACAACTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR GCA 72 bp | GGGTATGGCCTGGTGGTGGGGCACTTGTCTAAATTGTaGCAAGCCCTGGGTTTAACCCATAGGCCTACAAGA | + |
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Preference number: 3 (lower is better) Translates to: GYGLVVGHLSKL*QALGLTHRPTR Trigger: TCTTGTAGGCCTATGGGTTAAACCCAGGGCTTGGCACAATTTAGACAAGTGCCCCACCACCAGGCCATACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR-3UTR CAA 90 bp | CGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTCATCAGCTGGACTCCAAATaGAGTTCAAATCCAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RRLQLREDKPGLVVKARHQLDSK*SSNPAW Trigger: CCAGGCTGGATTTGAACTCAATTTGGAGTCCAGCTG...ATGACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR CCA 72 bp | CATAAGTATCACCTAGAATCTGTCCCTGACTCATTCTaGGCACCTGCTAGGGCCCAGATATGTGCACCTTCA | + |
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Preference number: 3 (lower is better) Translates to: HKYHLESVPDSF*APARAQICAPS Trigger: TGAAGGTGCACATATCTGGGCCCTAGCAGGTGCCCAGAATGAGTCAGGGACAGATTCTAGGTGATACTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR TCA 72 bp | CATTCCTGCAAGACGGAGGCAGGAGAATGGACAGTTTaGAGTGCAGCTGGACTCCAAATTGAGTTCAAATCC | + |
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Preference number: 3 (lower is better) Translates to: HSCKTEAGEWTV*SAAGLQIEFKS Trigger: GGATTTGAACTCAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGCAGGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR CCA 72 bp | ACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTaGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: TLSQTLRTLCCV*ELISNWFLPPE Trigger: CTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR TCA 72 bp | CTTCTCTCAAACATTTCTACACACTATCTCAAACTCTaGGAACACTGTGCTGTGTCTGGGAACTTATTTCTA | + |
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Preference number: 3 (lower is better) Translates to: LLSNISTHYLKL*EHCAVSGNLFL Trigger: TAGAAATAAGTTCCCAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATGTTTGAGAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | TGGTTTCTTCCCCCAGAGGCCACAGCACGGAGAGGCACGACTGCTCACTTATCCTCGCAGGTAAGGCCGTaGTCTGGGCTCTGGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: WFLPPEATARRGTTAHLSSQVRP*SGLWLP Trigger: GGGGAGCCAGAGCCCAGACCACGGCCTTACCTGCGA...GGATAAGTGAGCAGTCGTGCCTCTCCGTGCTGTGGCCTCTGGGGGAAGAAACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | GGGCGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTGGTAAGGCCGTGGTCTaGGCTCTGGCTCCCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRRLQLREDKPGLVVKARGKAVV*ALAPRC Trigger: GCAGCGGGGAGCCAGAGCCCAGACCACGGCCTTACC...ACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | AGGCTCGTCATTCCTGCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGTCTCCACCGGGGCCCTaGCCTCCAGAAGCAGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: RLVIPARRRQENGQFEVQSPPGP*PPEAGN Trigger: GTTGCCTGCTTCTGGAGGCCAGGGCCCCGGTGGAGA...CTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGCAGGAATGACGAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCGCACACTGGCAACACTaGAAGGGACGCTCACCCGTG | + |
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Preference number: 4 (lower is better) Translates to: RGRRISEFEASLVYRVSSAHWQH*KGRSPV Trigger: CACGGGTGAGCGTCCCTTCCAGTGTTGCCAGTGTGC...GGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | CACCTAGAATCTGTCCCTGACTCATTCTGGGCACCTGCTAGGGCCCAGATATGTCCCGCTGCTTCTCCTTaGTGGCCCAGAGCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: HLESVPDSFWAPARAQICPAASP*WPRACS Trigger: GGAGCAGGCTCTGGGCCACCAAGGAGAAGCAGCGGG...ACATATCTGGGCCCTAGCAGGTGCCCAGAATGAGTCAGGGACAGATTCTAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | GGGCGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTTCGCAGGTAAGGCCGTaGTCTGGGCTCTGGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GRRLQLREDKPGLVVKARSQVRP*SGLWLP Trigger: GGGGAGCCAGAGCCCAGACCACGGCCTTACCTGCGA...ACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR GCA 90 bp | CACCTAGAATCTGTCCCTGACTCATTCTGGGCACCTGCTAGGGCCCAGATATGTCCCAGCCCCTGTAGGTaGACATCCTGGGACTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HLESVPDSFWAPARAQICPSPCR*TSWDSR Trigger: CCTGGAGTCCCAGGATGTGCACCTACAGGGGCTGGG...ACATATCTGGGCCCTAGCAGGTGCCCAGAATGAGTCAGGGACAGATTCTAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | ACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCGGTAAGGCCGTGGTCTaGGCTCTGGCTCCCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TLCCVWELISNWFLPPEAGKAVV*ALAPRC Trigger: GCAGCGGGGAGCCAGAGCCCAGACCACGGCCTTACC...GGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR TCA 90 bp | TCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCACAGCACGGAGAGTGCTCCCCAGGGCACTaGGGCTCCCCTTCCTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SGNLFLTGFFPQRPQHGECSPGH*GSPSLC Trigger: ACACAAGGAAGGGGAGCCTCAGTGCCCTGGGGAGCA...CTCTCCGTGCTGTGGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR GCA 90 bp | GGGCGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTTCCTGGGACTCCAGGTaGACCGTTTGCAGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GRRLQLREDKPGLVVKARSWDSR*TVCRVR Trigger: CCTGACCCTGCAAACGGTGCACCTGGAGTCCCAGGA...ACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | GGGTATGGCCTGGTGGTGGGGCACTTGTCTAAATTGTGCCAAGCCCTGGGTTTAAAGCTCCTCAGAGTGTaGCACGCTCAGCCATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GYGLVVGHLSKLCQALGLKLLRV*HAQPSQ Trigger: CTGGGATGGCTGAGCGTGCCACACTCTGAGGAGCTT...TAAACCCAGGGCTTGGCACAATTTAGACAAGTGCCCCACCACCAGGCCATACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | TGGTTTCTTCCCCCAGAGGCCACAGCACGGAGAGGCACGACTGCTCACTTATCCGGGGACACTCGTATTTaGGCACATTCTCTCCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: WFLPPEATARRGTTAHLSGDTRI*AHSLRA Trigger: AGCACGGAGAGAATGTGCCCAAATACGAGTGTCCCC...GGATAAGTGAGCAGTCGTGCCTCTCCGTGCTGTGGCCTCTGGGGGAAGAAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | GCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGCTGGACTCCAAATTGGCTGCTTCTCCTTGGTaGCCCAGAGCCTGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ARRRQENGQFEVQLDSKLAASPW*PRACSP Trigger: TGGGGAGCAGGCTCTGGGCCACCAAGGAGAAGCAGC...CAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | ACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCCCCGCTGCTTCTCCTTaGTGGCCCAGAGCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TLCCVWELISNWFLPPEAPAASP*WPRACS Trigger: GGAGCAGGCTCTGGGCCACCAAGGAGAAGCAGCGGG...GGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR TCA 90 bp | CGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTCATCGGCCTCCACCTCCTTaGCAACTCCCTCCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RRLQLREDKPGLVVKARHRPPPP*QLPPGL Trigger: AAGCCCAGGAGGGAGTTGTCAAGGAGGTGGAGGCCG...ATGACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR TCA 90 bp | GCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGCTGGACTCCAAATTGACCGTCACGCAATGCTaGAGGCTGAGCTGGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ARRRQENGQFEVQLDSKLTVTQC*RLSWGS Trigger: AGAGCCCCAGCTCAGCCTTCAGCATTGCGTGACGGT...CAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR GCA 90 bp | GCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGCTGGACTCCAAATTGTCCTGGGACTCCAGGTaGACCGTTTGCAGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ARRRQENGQFEVQLDSKLSWDSR*TVCRVR Trigger: CCTGACCCTGCAAACGGTGCACCTGGAGTCCCAGGA...CAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR GCA 90 bp | CTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCACAGCACGGAGAGGCACGACTGTCGGAAGTGCTTGTTaGAGGCCAGGCAGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LISNWFLPPEATARRGTTVGSAC*RPGRRR Trigger: CCTTCTCCTGCCTGGCCTGCAACAAGCACTTCCGAC...AGTCGTGCCTCTCCGTGCTGTGGCCTCTGGGGGAAGAAACCAGTTAGAAATAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | GGGCGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTCCCTGGGGCGGGAGCTaGTCCTTTTCATCTTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: GRRLQLREDKPGLVVKARPWGGS*SFSSSS Trigger: CGAAGAAGATGAAAAGGACCAGCTCCCGCCCCAGGG...ACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCATGATGGTGGCACAGTaGGGACACTCGTATTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RGRRISEFEASLVYRVSSMMVAQ*GHSYLG Trigger: GCCCAAATACGAGTGTCCCCACTGTGCCACCATCAT...GGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| 3UTR CAA 72 bp | TGGGGGTATGGCCTGGTGGTGGGGCACTTGTCTAAATaGTGCCAAGCCCTGGGTTTAACCCATAGGCCTACA | + |
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Preference number: 4 (lower is better) Translates to: WGYGLVVGHLSK*CQALGLTHRPT Trigger: TGTAGGCCTATGGGTTAAACCCAGGGCTTGGCACAATTTAGACAAGTGCCCCACCACCAGGCCATACCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR TCA 90 bp | GCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGCTGGACTCCAAATTGCTCTGGTACCGTCCCTaGAAGCTCCTCAGAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ARRRQENGQFEVQLDSKLLWYRP*KLLRVW Trigger: CCACACTCTGAGGAGCTTTCAGGGACGGTACCAGAG...CAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR GCA 90 bp | CGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTCATCCATGTCGCAGTCCCTaGACTTGTGGGGCCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RRLQLREDKPGLVVKARHPCRSP*TCGAWF Trigger: GAACCAGGCCCCACAAGTGCAGGGACTGCGACATGG...ATGACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR GCA 90 bp | TCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCACAGCACGGAGAGGTCGGAAGTGCTTGTTaGAGGCCAGGCAGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SGNLFLTGFFPQRPQHGEVGSAC*RPGRRR Trigger: CCTTCTCCTGCCTGGCCTGCAACAAGCACTTCCGAC...CTCTCCGTGCTGTGGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | GCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGCTGGACTCCAAATTGCTGCAGCTCCTCTGGTaGGTACAGCTCTTCCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: ARRRQENGQFEVQLDSKLLQLLW*VQLFRD Trigger: ATCCCGGAAGAGCTGTACCCACCAGAGGAGCTGCAG...CAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR TCA 90 bp | TCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCACAGCACGGAGAGAGAGCTTGGAGGAAGTaGACGGGCAGGTGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: SGNLFLTGFFPQRPQHGERAWRK*TGRCHT Trigger: AGTGTGACACCTGCCCGTTCACTTCCTCCAAGCTCT...CTCTCCGTGCTGTGGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR GCA 90 bp | GCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGCTGGACTCCAAATTGTGTGACGCTTCATCTTaGTTGCCTCGACGCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: ARRRQENGQFEVQLDSKLCDASS*LPRRWR Trigger: ACGCCAGCGTCGAGGCAAGCAAGATGAAGCGTCACA...CAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CCA 90 bp | AGGCTCGTCATTCCTGCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGGTCTCCTGTCCTTGTTaGGGGCTAACGTCTCATGCT | + |
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Preference number: 4 (lower is better) Translates to: RLVIPARRRQENGQFEVQVSCPC*GLTSHA Trigger: AGCATGAGACGTTAGCCCCCAACAAGGACAGGAGAC...CTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGCAGGAATGACGAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR TCA 90 bp | GGGCGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTTTCTCTCTCAGCAGGTaGAAATGTATCCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GRRLQLREDKPGLVVKARFSLSR*KCIRCS Trigger: GCTGCAGCGGATACATTTTCACCTGCTGAGAGAGAA...ACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR GCA 90 bp | GCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGCTGGACTCCAAATTGGGCTTTCCCTTGGTCTaGCTCCGCCGTTTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARRRQENGQFEVQLDSKLGFPLV*LRRFGF Trigger: AAAACCAAAACGGCGGAGGCAGACCAAGGGAAAGCC...CAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGAACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCACCATGTCGCAGTCCCTaGACTTGTGGGGCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTLCCVWELISNWFLPPPCRSP*TCGAWF Trigger: GAACCAGGCCCCACAAGTGCAGGGACTGCGACATGG...TGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGTTCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | CGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTCATGGCACAGGTGCAGATTaGGGACGAAGTTCGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLQLREDKPGLVVKARHGTGAD*GRSSGH Trigger: ATGACCCGAACTTCGTCCCCAATCTGCACCTGTGCC...ATGACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCGGCACAGGTGCAGATTaGGGACGAAGTTCGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLCCVWELISNWFLPPEAGTGAD*GRSSGH Trigger: ATGACCCGAACTTCGTCCCCAATCTGCACCTGTGCC...GGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAATGCTTGCAACAATGCCAGTGTAATTTCATAGCGGGCGAAGACTACAATGCTGCTTCTCCTTGGTaGCCCAGAGCCTGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQCLQQCQCNFIAGEDYNAASPW*PRACSP Trigger: TGGGGAGCAGGCTCTGGGCCACCAAGGAGAAGCAGC...ATTGTAGTCTTCGCCCGCTATGAAATTACACTGGCATTGTTGCAAGCATTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTCGTCATTCCTGCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGCCAGGCTTCAACTTCTaGTCTTTGATCTGGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLVIPARRRQENGQFEVQPGFNF*SLIWVK Trigger: CTTCACCCAGATCAAAGAGCAGAAGTTGAAGCCTGG...CTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGCAGGAATGACGAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCACAGCACGGAGAGCAGGTGACACAGGTGTaGCCTCTCATTGCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGNLFLTGFFPQRPQHGEQVTQV*PLIAVN Trigger: ATTCACAGCAATGAGAGGCCACACCTGTGTCACCTG...CTCTCCGTGCTGTGGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCTTCTCTCTCAGCAGGTaGAAATGTATCCGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLCCVWELISNWFLPPEAFSLSR*KCIRCS Trigger: GCTGCAGCGGATACATTTTCACCTGCTGAGAGAGAA...GGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | CACCTAGAATCTGTCCCTGACTCATTCTGGGCACCTGCTAGGGCCCAGATATGTGTGACGATTGAAAGTTaGGAGCTTGGAGGAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLESVPDSFWAPARAQICVTIES*ELGGSE Trigger: TTCACTTCCTCCAAGCTCTCAACTTTCAATCGTCAC...ACATATCTGGGCCCTAGCAGGTGCCCAGAATGAGTCAGGGACAGATTCTAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | CATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTGGGAACTTGCCTTCAGGCACAGGTaGCACAGGTGTGGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFYTLSQTLRTLCCVWELAFRHR*HRCGLS Trigger: TGAGAGGCCACACCTGTGTCACCTGTGCCTGAAGGC...AAGTTCCCAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCTTGACAACTCCCTCCTaGGCTTCCACTCTTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TLCCVWELISNWFLPPEALTTPS*ASTLCT Trigger: GGTACAAAGAGTGGAAGCCCAGGAGGGAGTTGTCAA...GGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAAACATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTGGCCTTCAGGCACAGGTaGCACAGGTGTGGCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQTFLHTISNSENTVLCLAFRHR*HRCGLS Trigger: TGAGAGGCCACACCTGTGTCACCTGTGCCTGAAGGC...CAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATGTTTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCCCAGGCTTCAACTTCTaGTCTTTGATCTGGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLCCVWELISNWFLPPEAPGFNF*SLIWVK Trigger: CTTCACCCAGATCAAAGAGCAGAAGTTGAAGCCTGG...GGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGAACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGGCCTGGTTCCTGTGTaGGTGTTCACATGGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LRTLCCVWELISNWFLPPGLVPV*VFTWFL Trigger: TAGGAACCATGTGAACACCCACACAGGAACCAGGCC...TGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGTTCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCACAGCACGGAGAGTGCTTCTGTGCTATATaGATTTTCATGGTCCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNLFLTGFFPQRPQHGECFCAI*IFMVPL Trigger: GAGCGGGACCATGAAAATCCATATAGCACAGAAGCA...CTCTCCGTGCTGTGGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGAACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGGGGACACTCGTATTTaGGCACATTCTCTCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTLCCVWELISNWFLPPGDTRI*AHSLRA Trigger: AGCACGGAGAGAATGTGCCCAAATACGAGTGTCCCC...TGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGTTCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAAACATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTGCTCTGGTACCGTCCCTaGAAGCTCCTCAGAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQTFLHTISNSENTVLCLLWYRP*KLLRVW Trigger: CCACACTCTGAGGAGCTTTCAGGGACGGTACCAGAG...CAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATGTTTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | CATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTGGGAACTTAGAGCTTGGAGGAAGTaGACGGGCAGGTGTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: HFYTLSQTLRTLCCVWELRAWRK*TGRCHT Trigger: AGTGTGACACCTGCCCGTTCACTTCCTCCAAGCTCT...AAGTTCCCAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | ACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCGTGACGATTGAAAGTTaGGAGCTTGGAGGAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLCCVWELISNWFLPPEAVTIES*ELGGSE Trigger: TTCACTTCCTCCAAGCTCTCAACTTTCAATCGTCAC...GGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGAACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCATGCACAGGGAGCACTTaGAGGGCTTCTCATAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRTLCCVWELISNWFLPPCTGST*RASHKC Trigger: ACACTTATGAGAAGCCCTTCAAGTGCTCCCTGTGCA...TGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGTTCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCTGCTCCCCAGGGCACTaGGGCTCCCCTTCCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFRSIKILRLTLEFIESICSPGH*GSPSLC Trigger: ACACAAGGAAGGGGAGCCTCAGTGCCCTGGGGAGCA...GATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR GCA 90 bp | CATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTGGGAACTTTGTGACGCTTCATCTTaGTTGCCTCGACGCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HFYTLSQTLRTLCCVWELCDASS*LPRRWR Trigger: ACGCCAGCGTCGAGGCAAGCAAGATGAAGCGTCACA...AAGTTCCCAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTAAAGGTGAGCCTTGCTCTATGCCAAAGAAAGAGCTATGATATATATTCTCCACCGGGGCCCTaGCCTCCAGAAGCAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QKLKVSLALCQRKSYDIYSPPGP*PPEAGN Trigger: GTTGCCTGCTTCTGGAGGCCAGGGCCCCGGTGGAGA...ATATATATCATAGCTCTTTCTTTGGCATAGAGCAAGGCTCACCTTTAGTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | CAAAAACTAAAGGTGAGCCTTGCTCTATGCCAAAGAAAGAGCTATGATATATATCGGCCTCCACCTCCTTaGCAACTCCCTCCTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKLKVSLALCQRKSYDIYRPPPP*QLPPGL Trigger: AAGCCCAGGAGGGAGTTGTCAAGGAGGTGGAGGCCG...ATATATATCATAGCTCTTTCTTTGGCATAGAGCAAGGCTCACCTTTAGTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR GCA 90 bp | CATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTGGGAACTTGGCTTTCCCTTGGTCTaGCTCCGCCGTTTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HFYTLSQTLRTLCCVWELGFPLV*LRRFGF Trigger: AAAACCAAAACGGCGGAGGCAGACCAAGGGAAAGCC...AAGTTCCCAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCGCACACTGGCAACACTaGAAGGGACGCTCACCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFRSIKILRLTLEFIESIAHWQH*KGRSPV Trigger: CACGGGTGAGCGTCCCTTCCAGTGTTGCCAGTGTGC...GATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCCTGCAGCTCCTCTGGTaGGTACAGCTCTTCCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFRSIKILRLTLEFIESILQLLW*VQLFRD Trigger: ATCCCGGAAGAGCTGTACCCACCAGAGGAGCTGCAG...GATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGAACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCATGCTTCTGTGCTATATaGATTTTCATGGTCCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTLCCVWELISNWFLPPCFCAI*IFMVPL Trigger: GAGCGGGACCATGAAAATCCATATAGCACAGAAGCA...TGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGTTCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAACATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTGGTCTCCTGTCCTTGTTaGGGGCTAACGTCTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQTFLHTISNSENTVLCLVSCPC*GLTSHA Trigger: AGCATGAGACGTTAGCCCCCAACAAGGACAGGAGAC...CAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATGTTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCGTGATGATGGTGGCACAGTaGGGACACTCGTATTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FRSIKILRLTLEFIESIVMMVAQ*GHSYLG Trigger: GCCCAAATACGAGTGTCCCCACTGTGCCACCATCAT...CACGATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCGTGTTGACAACTCCCTCCTaGGCTTCCACTCTTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: FRSIKILRLTLEFIESIVLTTPS*ASTLCT Trigger: GGTACAAAGAGTGGAAGCCCAGGAGGGAGTTGTCAA...CACGATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAATGCTTGCAACAATGCCAGTGTAATTTCATAGCGGGCGAAGACTACAATTCTTCGAGGCTTAGATaGGAAATGGTCAGGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: SQCLQQCQCNFIAGEDYNSSRLR*EMVRTI Trigger: AATTGTCCTGACCATTTCCCATCTAAGCCTCGAAGA...ATTGTAGTCTTCGCCCGCTATGAAATTACACTGGCATTGTTGCAAGCATTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCGGCCTGGTTCCTGTGTaGGTGTTCACATGGTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SFRSIKILRLTLEFIESIGLVPV*VFTWFL Trigger: TAGGAACCATGTGAACACCCACACAGGAACCAGGCC...GATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCTGCACAGGGAGCACTTaGAGGGCTTCTCATAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFRSIKILRLTLEFIESICTGST*RASHKC Trigger: ACACTTATGAGAAGCCCTTCAAGTGCTCCCTGTGCA...GATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR GCA 90 bp | CATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTGGGAACTTCTCTCCGTGCTTCTGTaGTATATGGATTTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFYTLSQTLRTLCCVWELLSVLL*YMDFHG Trigger: ACCATGAAAATCCATATAGCACAGAAGCACGGAGAG...AAGTTCCCAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAACTAAAGGTGAGCCTTGCTCTATGCCAAAGAAAGAGCTATGATATATATCAGGTGACACAGGTGTaGCCTCTCATTGCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QKLKVSLALCQRKSYDIYQVTQV*PLIAVN Trigger: ATTCACAGCAATGAGAGGCCACACCTGTGTCACCTG...ATATATATCATAGCTCTTTCTTTGGCATAGAGCAAGGCTCACCTTTAGTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCGTGTCTTCGAGGCTTAGATaGGAAATGGTCAGGACAATT | + |
|
Preference number: 4 (lower is better) Translates to: FRSIKILRLTLEFIESIVSSRLR*EMVRTI Trigger: AATTGTCCTGACCATTTCCCATCTAAGCCTCGAAGA...CACGATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAACTAAAGGTGAGCCTTGCTCTATGCCAAAGAAAGAGCTATGATATATATCTCTCCGTGCTTCTGTaGTATATGGATTTTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKLKVSLALCQRKSYDIYLSVLL*YMDFHG Trigger: ACCATGAAAATCCATATAGCACAGAAGCACGGAGAG...ATATATATCATAGCTCTTTCTTTGGCATAGAGCAAGGCTCACCTTTAGTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 90 bp | CCCAGCCCCTGTAGGTGCACATCCTGGGACTCCAGGTGCACCGTTTaGAGGGTCAGGATCCGCCTGTCGCTCTCCACCGGGGCCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSPCRCTSWDSRCTV*RVRIRLSLSTGALA Trigger: GGCCAGGGCCCCGGTGGAGAGCGACAGGCGGATCCTGACCCTGCAAACGGTGCACCTGGAGTCCCAGGATGTGCACCTACAGGGGCTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 90 bp | CTCAGCCATCCCAGCCCCTGTAGGTGCACATCCTGGGACTCCAGGTaGACCGTTTGCAGGGTCAGGATCCGCCTGTCGCTCTCCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSHPSPCRCTSWDSR*TVCRVRIRLSLSTG Trigger: CCCGGTGGAGAGCGACAGGCGGATCCTGACCCTGCAAACGGTGCACCTGGAGTCCCAGGATGTGCACCTACAGGGGCTGGGATGGCTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 90 bp | GATTATCTCGCAGGTAAGGCCGTGGTCTGGGCTCTGGCTCCCCGCTaGTTCTCCTTGGTGGCCCAGAGCCTGCTCCCCAGGGCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DYLAGKAVVWALAPR*FSLVAQSLLPRALR Trigger: CCTCAGTGCCCTGGGGAGCAGGCTCTGGGCCACCAAGGAGAAGCAGCGGGGAGCCAGAGCCCAGACCACGGCCTTACCTGCGAGATAATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 90 bp | GAGTGTGGCACGCTCAGCCATCCCAGCCCCTGTAGGTGCACATCCTaGGACTCCAGGTGCACCGTTTGCAGGGTCAGGATCCGCCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ECGTLSHPSPCRCTS*DSRCTVCRVRIRLS Trigger: CGACAGGCGGATCCTGACCCTGCAAACGGTGCACCTGGAGTCCCAGGATGTGCACCTACAGGGGCTGGGATGGCTGAGCGTGCCACACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS TCA 90 bp | TCTGGTGGGTACAGCTCTTCCGGGATGCTGACCGTCACGCAATGCTaGAGGCTGAGCTGGGGCTCTGGGTCGAGCCACAGCACGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGGYSSSGMLTVTQC*RLSWGSGSSHSTDG Trigger: GCCATCCGTGCTGTGGCTCGACCCAGAGCCCCAGCTCAGCCTTCAGCATTGCGTGACGGTCAGCATCCCGGAAGAGCTGTACCCACCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 90 bp | CGGGATGCTGACCGTCACGCAATGCTGAAGGCTGAGCTGGGGCTCTaGGTCGAGCCACAGCACGGATGGCAACTGCAGTATGCCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RDADRHAMLKAELGL*VEPQHGWQLQYAFR Trigger: GCGGAAGGCATACTGCAGTTGCCATCCGTGCTGTGGCTCGACCCAGAGCCCCAGCTCAGCCTTCAGCATTGCGTGACGGTCAGCATCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 90 bp | AGCTCCTCAGAGTGTGGCACGCTCAGCCATCCCAGCCCCTGTAGGTaGACATCCTGGGACTCCAGGTGCACCGTTTGCAGGGTCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SSSECGTLSHPSPCR*TSWDSRCTVCRVRI Trigger: GATCCTGACCCTGCAAACGGTGCACCTGGAGTCCCAGGATGTGCACCTACAGGGGCTGGGATGGCTGAGCGTGCCACACTCTGAGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 90 bp | CGGCACTTCATCTCCTCCGGGCTCTGGCTGTGCAGGTTACGCAGATaGACACGCAGGTCGCTCTTCCTCGCGATGATGGTGGCACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHFISSGLWLCRLRR*TRRSLFLAMMVAQW Trigger: CCACTGTGCCACCATCATCGCGAGGAAGAGCGACCTGCGTGTCCATCTGCGTAACCTGCACAGCCAGAGCCCGGAGGAGATGAAGTGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS TCA 90 bp | CCCTGGCCTCCAGAAGCAGGCAACTGTTCTCGGCCTCCACCTCCTTaGCAACTCCCTCCTGGGCTTCCACTCTTTGTACCCCGTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PWPPEAGNCSRPPPP*QLPPGLPLFVPRPP Trigger: AGGAGGACGGGGTACAAAGAGTGGAAGCCCAGGAGGGAGTTGTCAAGGAGGTGGAGGCCGAGAACAGTTGCCTGCTTCTGGAGGCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGCTGGACTCCAAATTGCCCCGCTGCTTCTCCTaGGTGGCCCAGAGCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARRRQENGQFEVQLDSKLPRCFS*VAQSLL Trigger: GAGCAGGCTCTGGGCCACCAAGGAGAAGCAGCGGGG...CAATTTGGAGTCCAGCTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 90 bp | AGCAGGCAACTGTTCTCGGCCTCCACCTCCTTGACAACTCCCTCCTaGGCTTCCACTCTTTGTACCCCGTCCTCCTCTTTCTCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRQLFSASTSLTTPS*ASTLCTPSSSFSSS Trigger: AGAGGAGGAGAAAGAGGAGGACGGGGTACAAAGAGTGGAAGCCCAGGAGGGAGTTGTCAAGGAGGTGGAGGCCGAGAACAGTTGCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 90 bp | AACGCCATGTCGCAGTCCCTGCACTTGTGGGGCCTGGTTCCTGTGTaGGTGTTCACATGGTTCCTAAGAAGAGTGACAGTCCGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NAMSQSLHLWGLVPV*VFTWFLRRVTVRKA Trigger: GGCCTTCCGGACTGTCACTCTTCTTAGGAACCATGTGAACACCCACACAGGAACCAGGCCCCACAAGTGCAGGGACTGCGACATGGCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 90 bp | CTCCCTCCGAGGCCTGTGTCCTTGTCACTGGTCTCCTGTCCTTGTTaGGGGCTAACGTCTCATGCTCCGGGTCACACTTCTTTCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPPRPVSLSLVSCPC*GLTSHAPGHTSFCV Trigger: GACACAGAAAGAAGTGTGACCCGGAGCATGAGACGTTAGCCCCCAACAAGGACAGGAGACCAGTGACAAGGACACAGGCCTCGGAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | GGGCGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTCTCCAGGTGCACCGTTaGCAGGGTCAGGATCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRRLQLREDKPGLVVKARLQVHR*QGQDPP Trigger: AGGCGGATCCTGACCCTGCAAACGGTGCACCTGGAG...ACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS TCA 90 bp | TGTGCAGGTTACGCAGATGGACACGCAGGTCGCTCTTCCTCGCGATaGTGGTGGCACAGTGGGGACACTCGTATTTGGGCACATTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CAGYADGHAGRSSSR*WWHSGDTRIWAHSL Trigger: GAGAGAATGTGCCCAAATACGAGTGTCCCCACTGTGCCACCATCATCGCGAGGAAGAGCGACCTGCGTGTCCATCTGCGTAACCTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 90 bp | AGATGGACACGCAGGTCGCTCTTCCTCGCGATGATGGTGGCACAGTaGGGACACTCGTATTTGGGCACATTCTCTCCGTGCTTCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RWTRRSLFLAMMVAQ*GHSYLGTFSPCFCA Trigger: AGCACAGAAGCACGGAGAGAATGTGCCCAAATACGAGTGTCCCCACTGTGCCACCATCATCGCGAGGAAGAGCGACCTGCGTGTCCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 90 bp | CTTATCCATCATGTTAAAGATTATCTCGCAGGTAAGGCCGTGGTCTaGGCTCTGGCTCCCCGCTGCTTCTCCTTGGTGGCCCAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LIHHVKDYLAGKAVV*ALAPRCFSLVAQSL Trigger: CAGGCTCTGGGCCACCAAGGAGAAGCAGCGGGGAGCCAGAGCCCAGACCACGGCCTTACCTGCGAGATAATCTTTAACATGATGGATAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | GGGTATGGCCTGGTGGTGGGGCACTTGTCTAAATTGTGCCAAGCCCTGGGTTTATGTCGGAAGTGCTTGTaGCAGGCCAGGCAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GYGLVVGHLSKLCQALGLCRKCL*QARQEK Trigger: CTTCTCCTGCCTGGCCTGCAACAAGCACTTCCGACA...TAAACCCAGGGCTTGGCACAATTTAGACAAGTGCCCCACCACCAGGCCATACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | GGGCGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTCCGAGGCCTGTGTCCTaGTCACTGGTCTCCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRRLQLREDKPGLVVKARPRPVS*SLVSCP Trigger: AGGACAGGAGACCAGTGACAAGGACACAGGCCTCGG...ACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | CACCTAGAATCTGTCCCTGACTCATTCTGGGCACCTGCTAGGGCCCAGATATGTCCGAGGCCTGTGTCCTaGTCACTGGTCTCCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HLESVPDSFWAPARAQICPRPVS*SLVSCP Trigger: AGGACAGGAGACCAGTGACAAGGACACAGGCCTCGG...ACATATCTGGGCCCTAGCAGGTGCCCAGAATGAGTCAGGGACAGATTCTAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCTCGGCCTCCACCTCCTaGACAACTCCCTCCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLCCVWELISNWFLPPEASASTS*TTPSWA Trigger: AGCCCAGGAGGGAGTTGTCAAGGAGGTGGAGGCCGA...GGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGTGCTGTGTCTGGGAACTTATTTCTAACTGGTTTCTTCCCCCAGAGGCCTCGCAGTCCCTGCACTaGTGGGGCCTGGTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLCCVWELISNWFLPPEASQSLH*WGLVPV Trigger: CACAGGAACCAGGCCCCACAAGTGCAGGGACTGCGA...GGCCTCTGGGGGAAGAAACCAGTTAGAAATAAGTTCCCAGACACAGCACAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 90 bp | CCGTCCTCCTCTTTCTCCTCCTCTAGGTCTCCAGGCTTCAACTTCTaGTCTTTGATCTGGGTGAAGTACCCAGAAGGGACAGGGACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSSFSSSRSPGFNF*SLIWVKYPEGTGTS Trigger: TGAGGTCCCTGTCCCTTCTGGGTACTTCACCCAGATCAAAGAGCAGAAGTTGAAGCCTGGAGACCTAGAGGAGGAGAAAGAGGAGGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 90 bp | GTCCTTGTCACTGGTCTCCTGTCCTTGTTGGGGGCTAACGTCTCATaGTCCGGGTCACACTTCTTTCTGTGTCTCTGCAGGTTACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLVTGLLSLLGANVS*SGSHFFLCLCRLLQ Trigger: CTGGAGTAACCTGCAGAGACACAGAAAGAAGTGTGACCCGGAGCATGAGACGTTAGCCCCCAACAAGGACAGGAGACCAGTGACAAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 90 bp | ATTCTCTCTCAGCAGGTGAAAATGTATCCGCTGCAGCTCCTCTGGTaGGTACAGCTCTTCCGGGATGCTGACCGTCACGCAATGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILSQQVKMYPLQLLW*VQLFRDADRHAMLK Trigger: CTTCAGCATTGCGTGACGGTCAGCATCCCGGAAGAGCTGTACCCACCAGAGGAGCTGCAGCGGATACATTTTCACCTGCTGAGAGAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAATGCTTGCAACAATGCCAGTGTAATTTCATAGCGGGCGAAGACTACAATCCCCGCTGCTTCTCCTaGGTGGCCCAGAGCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQCLQQCQCNFIAGEDYNPRCFS*VAQSLL Trigger: GAGCAGGCTCTGGGCCACCAAGGAGAAGCAGCGGGG...ATTGTAGTCTTCGCCCGCTATGAAATTACACTGGCATTGTTGCAAGCATTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 90 bp | GGGGCTAACGTCTCATGCTCCGGGTCACACTTCTTTCTGTGTCTCTaGAGGTTACTCCAGCGGGAGAAACGTTTATCACACTTGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GANVSCSGSHFFLCL*RLLQREKRLSHLRH Trigger: GTGCCTCAAGTGTGATAAACGTTTCTCCCGCTGGAGTAACCTGCAGAGACACAGAAAGAAGTGTGACCCGGAGCATGAGACGTTAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCTTCCCCCAGAGGCCACAGCACGGAGAGGCACGACTGCTCACTTATCCAAACGTTTATCACACTaGAGGCACAGGTGCAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: WFLPPEATARRGTTAHLSKRLSH*RHRCRL Trigger: CAATCTGCACCTGTGCCTCAAGTGTGATAAACGTTT...GGATAAGTGAGCAGTCGTGCCTCTCCGTGCTGTGGCCTCTGGGGGAAGAAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTCGTCATTCCTGCAAGACGGAGGCAGGAGAATGGACAGTTTGAAGTGCAGTTCAACTTCTGCTCTTaGATCTGGGTGAAGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLVIPARRRQENGQFEVQFNFCS*IWVKYP Trigger: TGGGTACTTCACCCAGATCAAAGAGCAGAAGTTGAA...CTGCACTTCAAACTGTCCATTCTCCTGCCTCCGTCTTGCAGGAATGACGAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAAACATTTCTACACACTATCTCAAACTCTGAGAACACTGTGCTGTGTCTGTCGCAGTCCCTGCACTaGTGGGGCCTGGTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQTFLHTISNSENTVLCLSQSLH*WGLVPV Trigger: CACAGGAACCAGGCCCCACAAGTGCAGGGACTGCGA...CAGACACAGCACAGTGTTCTCAGAGTTTGAGATAGTGTGTAGAAATGTTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | GGGCGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTAAACGTTTATCACACTaGAGGCACAGGTGCAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: GRRLQLREDKPGLVVKARKRLSH*RHRCRL Trigger: CAATCTGCACCTGTGCCTCAAGTGTGATAAACGTTT...ACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS TCA 90 bp | GTGTGGCCTCTCATTGCTGTGAATTTTGATGTGACGATTGAAAGTTaGGAGCTTGGAGGAAGTGAACGGGCAGGTGTCACACTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VWPLIAVNFDVTIES*ELGGSERAGVTLKA Trigger: AGCTTTCAGTGTGACACCTGCCCGTTCACTTCCTCCAAGCTCTCAACTTTCAATCGTCACATCAAAATTCACAGCAATGAGAGGCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS-3UTR CAA 90 bp | CGAAGACTACAATTAAGAGAAGACAAGCCCGGCCTGGTGGTAAAGGCTCGTCATTTCAACTTCTGCTCTTaGATCTGGGTGAAGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRLQLREDKPGLVVKARHFNFCS*IWVKYP Trigger: TGGGTACTTCACCCAGATCAAAGAGCAGAAGTTGAA...ATGACGAGCCTTTACCACCAGGCCGGGCTTGTCTTCTCTTAATTGTAGTCTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCTCGGCCTCCACCTCCTaGACAACTCCCTCCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFRSIKILRLTLEFIESISASTS*TTPSWA Trigger: AGCCCAGGAGGGAGTTGTCAAGGAGGTGGAGGCCGA...GATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS-3UTR CAA 90 bp | TTCCGCAGCATTAAGATTCTCAGGTTGACTTTAGAATTCATTGAAAGCATCGTGTGTCGGAAGTGCTTGTaGCAGGCCAGGCAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FRSIKILRLTLEFIESIVCRKCL*QARQEK Trigger: CTTCTCCTGCCTGGCCTGCAACAAGCACTTCCGACA...CACGATGCTTTCAATGAATTCTAAAGTCAACCTGAGAATCTTAATGCTGCGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 72 bp | GCAGGTAAGGCCGTGGTCTGGGCTCTGGCTCCCCGCTaGTTCTCCTTGGTGGCCCAGAGCCTGCTCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGKAVVWALAPR*FSLVAQSLLPR Trigger: CCTGGGGAGCAGGCTCTGGGCCACCAAGGAGAAGCAGCGGGGAGCCAGAGCCCAGACCACGGCCTTACCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 72 bp | GGGTCAGGATCCGCCTGTCGCTCTCCACCGGGGCCCTaGCCTCCAGAAGCAGGCAACTGTTCTCGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GSGSACRSPPGP*PPEAGNCSRPP Trigger: TGGAGGCCGAGAACAGTTGCCTGCTTCTGGAGGCCAGGGCCCCGGTGGAGAGCGACAGGCGGATCCTGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 72 bp | CCCAGCCCCTGTAGGTGCACATCCTGGGACTCCAGGTaGACCGTTTGCAGGGTCAGGATCCGCCTGTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSPCRCTSWDSR*TVCRVRIRLSL Trigger: GAGCGACAGGCGGATCCTGACCCTGCAAACGGTGCACCTGGAGTCCCAGGATGTGCACCTACAGGGGCTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 72 bp | TGTAGGTGCACATCCTGGGACTCCAGGTGCACCGTTTaGAGGGTCAGGATCCGCCTGTCGCTCTCCACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CRCTSWDSRCTV*RVRIRLSLSTG Trigger: CCCGGTGGAGAGCGACAGGCGGATCCTGACCCTGCAAACGGTGCACCTGGAGTCCCAGGATGTGCACCTACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 72 bp | GAGTGTGGCACGCTCAGCCATCCCAGCCCCTGTAGGTaGACATCCTGGGACTCCAGGTGCACCGTTTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ECGTLSHPSPCR*TSWDSRCTVCR Trigger: CCTGCAAACGGTGCACCTGGAGTCCCAGGATGTGCACCTACAGGGGCTGGGATGGCTGAGCGTGCCACACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 72 bp | GCTGAGCTGGGGCTCTGGGTCGAGCCACAGCACGGATaGCAACTGCAGTATGCCTTCCGCCTCTGGTACCGT | + |
|
Preference number: 6 (lower is better) Translates to: AELGLWVEPQHG*QLQYAFRLWYR Trigger: ACGGTACCAGAGGCGGAAGGCATACTGCAGTTGCCATCCGTGCTGTGGCTCGACCCAGAGCCCCAGCTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS TCA 72 bp | TACAGCTCTTCCGGGATGCTGACCGTCACGCAATGCTaGAGGCTGAGCTGGGGCTCTGGGTCGAGCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: YSSSGMLTVTQC*RLSWGSGSSHS Trigger: GCTGTGGCTCGACCCAGAGCCCCAGCTCAGCCTTCAGCATTGCGTGACGGTCAGCATCCCGGAAGAGCTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 72 bp | ACGCTCAGCCATCCCAGCCCCTGTAGGTGCACATCCTaGGACTCCAGGTGCACCGTTTGCAGGGTCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: TLSHPSPCRCTS*DSRCTVCRVRI Trigger: GATCCTGACCCTGCAAACGGTGCACCTGGAGTCCCAGGATGTGCACCTACAGGGGCTGGGATGGCTGAGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 72 bp | GCGGGACAGTATCGGCACTTCATCTCCTCCGGGCTCTaGCTGTGCAGGTTACGCAGATGGACACGCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGQYRHFISSGL*LCRLRRWTRRS Trigger: CGACCTGCGTGTCCATCTGCGTAACCTGCACAGCCAGAGCCCGGAGGAGATGAAGTGCCGATACTGTCCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 72 bp | AAGATTATCTCGCAGGTAAGGCCGTGGTCTGGGCTCTaGCTCCCCGCTGCTTCTCCTTGGTGGCCCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KIISQVRPWSGL*LPAASPWWPRA Trigger: GGCTCTGGGCCACCAAGGAGAAGCAGCGGGGAGCCAGAGCCCAGACCACGGCCTTACCTGCGAGATAATCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 72 bp | GCTCACCCGTGTGTGAGCGGATGTGACGCTTCATCTTaGTTGCCTCGACGCTGGCGTACTTGCACAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AHPCVSGCDASS*LPRRWRTCTGS Trigger: GCTCCCTGTGCAAGTACGCCAGCGTCGAGGCAAGCAAGATGAAGCGTCACATCCGCTCACACACGGGTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 72 bp | ATCTCCTCCGGGCTCTGGCTGTGCAGGTTACGCAGATaGACACGCAGGTCGCTCTTCCTCGCGATGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ISSGLWLCRLRR*TRRSLFLAMMV Trigger: CACCATCATCGCGAGGAAGAGCGACCTGCGTGTCCATCTGCGTAACCTGCACAGCCAGAGCCCGGAGGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS TCA 72 bp | CAACTGCAGTATGCCTTCCGCCTCTGGTACCGTCCCTaGAAGCTCCTCAGAGTGTGGCACGCTCAGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: QLQYAFRLWYRP*KLLRVWHAQPS Trigger: GGATGGCTGAGCGTGCCACACTCTGAGGAGCTTTCAGGGACGGTACCAGAGGCGGAAGGCATACTGCAGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CCA 72 bp | CGCAGGTCGCTCTTCCTCGCGATGATGGTGGCACAGTaGGGACACTCGTATTTGGGCACATTCTCTCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSLFLAMMVAQ*GHSYLGTFSPC Trigger: GCACGGAGAGAATGTGCCCAAATACGAGTGTCCCCACTGTGCCACCATCATCGCGAGGAAGAGCGACCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CAA 72 bp | CCTTGTGTCCTGCTTCTCCCTCCGAGGCCTGTGTCCTaGTCACTGGTCTCCTGTCCTTGTTGGGGGCTAACG | + |
|
Preference number: 6 (lower is better) Translates to: PCVLLLPPRPVS*SLVSCPCWGLT Trigger: CGTTAGCCCCCAACAAGGACAGGAGACCAGTGACAAGGACACAGGCCTCGGAGGGAGAAGCAGGACACAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS CAA 90 bp | GCTTCTCCCTCCGAGGCCTGTGTCCTTGTCACTGGTCTCCTGTCCTaGTTGGGGGCTAACGTCTCATGCTCCGGGTCACACTTCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASPSEACVLVTGLLS*LGANVSCSGSHFFL Trigger: CAGAAAGAAGTGTGACCCGGAGCATGAGACGTTAGCCCCCAACAAGGACAGGAGACCAGTGACAAGGACACAGGCCTCGGAGGGAGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
||
| CDS GCA 72 bp | CTCAGGTGCACGGTCAGTAGCTGCTTCTGTCGGAAGTaGTTGTTGCAGGCCAGGCAGGAGAAGGGCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LRCTVSSCFCRK*LLQARQEKGFS Trigger: AGAGAAGCCCTTCTCCTGCCTGGCCTGCAACAAGCACTTCCGACAGAAGCAGCTACTGACCGTGCACCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS GCA 72 bp | GGGTCATGGTACTTCCTCAGGTGCACGGTCAGTAGCTaGTTCTGTCGGAAGTGCTTGTTGCAGGCCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GSWYFLRCTVSS*FCRKCLLQARQ Trigger: CTGCCTGGCCTGCAACAAGCACTTCCGACAGAAGCAGCTACTGACCGTGCACCTGAGGAAGTACCATGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS CCA 72 bp | CTGTTCTCGGCCTCCACCTCCTTGACAACTCCCTCCTaGGCTTCCACTCTTTGTACCCCGTCCTCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LFSASTSLTTPS*ASTLCTPSSSF Trigger: GAAAGAGGAGGACGGGGTACAAAGAGTGGAAGCCCAGGAGGGAGTTGTCAAGGAGGTGGAGGCCGAGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS CCA 72 bp | CAGCAGGTGAAAATGTATCCGCTGCAGCTCCTCTGGTaGGTACAGCTCTTCCGGGATGCTGACCGTCACGCA | + |
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Preference number: 6 (lower is better) Translates to: QQVKMYPLQLLW*VQLFRDADRHA Trigger: TGCGTGACGGTCAGCATCCCGGAAGAGCTGTACCCACCAGAGGAGCTGCAGCGGATACATTTTCACCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS CCA 72 bp | GGCAGGTGTCACACTGAAAGCTCTGAGGCTTTCCCTTaGTCTGCCTCCGCCGTTTTGGTTTTGCGGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRCHTESSEAFP*SASAVLVLRLW Trigger: CCAAAGCCGCAAAACCAAAACGGCGGAGGCAGACCAAGGGAAAGCCTCAGAGCTTTCAGTGTGACACCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS CCA 72 bp | AGGCACAGGTGCAGATTGGGGACGAAGTTCGGGTCATaGTACTTCCTCAGGTGCACGGTCAGTAGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RHRCRLGTKFGS*YFLRCTVSSCF Trigger: GAAGCAGCTACTGACCGTGCACCTGAGGAAGTACCATGACCCGAACTTCGTCCCCAATCTGCACCTGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS TCA 72 bp | TTTGGTTTTGCGGCTTTGGCTCCCGGCACACTTGTCTaGTTGGCCGCTGGTGGATCTTGCTGTTCTTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: FGFAALAPGTLV*LAAGGSCCSSR Trigger: CCTCGAAGAACAGCAAGATCCACCAGCGGCCAATCAGACAAGTGTGCCGGGAGCCAAAGCCGCAAAACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS GCA 72 bp | ACTGGTCTCCTGTCCTTGTTGGGGGCTAACGTCTCATaGTCCGGGTCACACTTCTTTCTGTGTCTCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TGLLSLLGANVS*SGSHFFLCLCR Trigger: CCTGCAGAGACACAGAAAGAAGTGTGACCCGGAGCATGAGACGTTAGCCCCCAACAAGGACAGGAGACCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS TCA 72 bp | TTCTCCTCGGCCATTAGCACATTCTCTCTCAGCAGGTaGAAATGTATCCGCTGCAGCTCCTCTGGTGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: FSSAISTFSLSR*KCIRCSSSGGY Trigger: GTACCCACCAGAGGAGCTGCAGCGGATACATTTTCACCTGCTGAGAGAGAATGTGCTAATGGCCGAGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS TCA 72 bp | TCTGTGCTATATGGATTTTCATGGTCCCGCTCTGGGTaGACCGGACGTGACAGGTGGGACATTCATACGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVLYGFSWSRSG*TGRDRWDIHTA Trigger: AGCCGTATGAATGTCCCACCTGTCACGTCCGGTTCACCCAGAGCGGGACCATGAAAATCCATATAGCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS GCA 72 bp | GTCTCATGCTCCGGGTCACACTTCTTTCTGTGTCTCTaGAGGTTACTCCAGCGGGAGAAACGTTTATCACAC | + |
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Preference number: 6 (lower is better) Translates to: VSCSGSHFFLCL*RLLQREKRLSH Trigger: GTGTGATAAACGTTTCTCCCGCTGGAGTAACCTGCAGAGACACAGAAAGAAGTGTGACCCGGAGCATGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS CCA 72 bp | AGTCCGGAAGGCCTTCAGGCACAGGTGACACAGGTGTaGCCTCTCATTGCTGTGAATTTTGATGTGACGATT | + |
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Preference number: 6 (lower is better) Translates to: SPEGLQAQVTQV*PLIAVNFDVTI Trigger: AATCGTCACATCAAAATTCACAGCAATGAGAGGCCACACCTGTGTCACCTGTGCCTGAAGGCCTTCCGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS CAA 72 bp | GAGAAACGTTTATCACACTTGAGGCACAGGTGCAGATaGGGGACGAAGTTCGGGTCATGGTACTTCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: EKRLSHLRHRCR*GTKFGSWYFLR Trigger: CCTGAGGAAGTACCATGACCCGAACTTCGTCCCCAATCTGCACCTGTGCCTCAAGTGTGATAAACGTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS TCA 72 bp | CTCATTGCTGTGAATTTTGATGTGACGATTGAAAGTTaGGAGCTTGGAGGAAGTGAACGGGCAGGTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: LIAVNFDVTIES*ELGGSERAGVT Trigger: TGTGACACCTGCCCGTTCACTTCCTCCAAGCTCTCAACTTTCAATCGTCACATCAAAATTCACAGCAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS CAA 90 bp | TTAGATGGGAAATGGTCAGGACAATTTCGTCGTCTTTTCCCTCTTTaGGTTTCATTTCCAGAAGGAGCAACCTCTCTTCTCTCTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LDGKWSGQFRRLFPL*VSFPEGATSLLSCL Trigger: CAGACAAGAGAGAAGAGAGGTTGCTCCTTCTGGAAATGAAACCAAAAGAGGGAAAAGACGACGAAATTGTCCTGACCATTTCCCATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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| CDS CAA 72 bp | AAATGGTCAGGACAATTTCGTCGTCTTTTCCCTCTTTaGGTTTCATTTCCAGAAGGAGCAACCTCTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: KWSGQFRRLFPL*VSFPEGATSLL Trigger: GAGAAGAGAGGTTGCTCCTTCTGGAAATGAAACCAAAAGAGGGAAAAGACGACGAAATTGTCCTGACCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094287.10 ENSMUST00000179693.2 |
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