Pregenerated sensors for CTCF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005698Ensembl transcript IDs: ENSMUST00000005841.16
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTCAAACGCTGGCTCCATGAGCTGGAAATCAGGATTTTTCACATaGGTGTCCATGACTGGCAGGCAACAGGCCCAGTGCCCTCTGCTA | + |
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Preference number: 1 (lower is better) Translates to: GSNAGSMSWKSGFFT*VSMTGRQQAQCPLL Trigger: TAGCAGAGGGCACTGGGCCTGTTGCCTGCCAGTCATGGACACCCATGTGAAAAATCCTGATTTCCAGCTCATGGAGCCAGCGTTTGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR GCA 90 bp | GCCAAGAAAGAGGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATaGCATCCTACTGGTGTGCAACTGACTCTGAGCAAAGGGAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: AKKEAKLSGQKLIVA*HPTGVQLTLSKGSQ Trigger: CTGACTCCCTTTGCTCAGAGTCAGTTGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCCTCTTTCTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR GCA 90 bp | GGATTTTTCACATGGGTGTCCATGACTGGCAGGCAACAGGCCCAGTaGCCTCTGCTACATGATTGTGATCCGAGTCAACATTTACATACC | + |
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Preference number: 1 (lower is better) Translates to: GFFTWVSMTGRQQAQ*PLLHDCDPSQHLHT Trigger: GGTATGTAAATGTTGACTCGGATCACAATCATGTAGCAGAGGGCACTGGGCCTGTTGCCTGCCAGTCATGGACACCCATGTGAAAAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR CCA 90 bp | TTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTaGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: FSWEDHRTLGNPWPF*SGLRSRERAQCLCF Trigger: GAAACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR-3UTR CCA 90 bp | GGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATGCCATCCTACTGGTGTGCAACTCTGGGAAACCCGTaGCCGTTCTGGAGTGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: GKAFRTETDRSMPSYWCATLGNP*PFWSGL Trigger: TAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGT...TGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTTCCATCTAATGGTGTAAAATTATaGCGTTCCCAAAGCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VLEWFTIKREGSMSLFPSNGVKL*RSQSQR Trigger: TCTTTGGCTTTGGGAACGGCATAATTTTACACCATT...AGATGGAAACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR-3UTR TCA 90 bp | CATGATTGTGATCCGAGTCAACATTTACATACCACTAAGTCTGTGTCTGTGGCAGGTTATTTACAAGCTTaGCCATACCAGAAACTTTGC | + |
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Preference number: 2 (lower is better) Translates to: HDCDPSQHLHTTKSVSVAGYLQA*PYQKLC Trigger: GCAAAGTTTCTGGTATGGTCAAGCTTGTAAATAACC...TGCCACAGACACAGACTTAGTGGTATGTAAATGTTGACTCGGATCACAATCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR CCA 72 bp | GCTGGCTCCATGAGCTGGAAATCAGGATTTTTCACATaGGTGTCCATGACTGGCAGGCAACAGGCCCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: AGSMSWKSGFFT*VSMTGRQQAQC Trigger: GCACTGGGCCTGTTGCCTGCCAGTCATGGACACCCATGTGAAAAATCCTGATTTCCAGCTCATGGAGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR GCA 72 bp | ACATGGGTGTCCATGACTGGCAGGCAACAGGCCCAGTaGCCTCTGCTACATGATTGTGATCCGAGTCAACAT | + |
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Preference number: 3 (lower is better) Translates to: TWVSMTGRQQAQ*PLLHDCDPSQH Trigger: ATGTTGACTCGGATCACAATCATGTAGCAGAGGGCACTGGGCCTGTTGCCTGCCAGTCATGGACACCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR CCA 72 bp | GAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTaGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGT | + |
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Preference number: 3 (lower is better) Translates to: EDHRTLGNPWPF*SGLRSRERAQC Trigger: ACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR CCA 72 bp | TTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTaGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: FSWEDHRTLGNP*PFWSGLRSRER Trigger: CCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR CCA 72 bp | TTCAGGACAGAAACTGATCGTAGCATGCCATCCTACTaGTGTGCAACTGACTCTGAGCAAAGGGAGTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: FRTETDRSMPSY*CATDSEQRESG Trigger: TCCTGACTCCCTTTGCTCAGAGTCAGTTGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR GCA 72 bp | GAGGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATaGCATCCTACTGGTGTGCAACTGACTCTGAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: EAKLSGQKLIVA*HPTGVQLTLSK Trigger: TTTGCTCAGAGTCAGTTGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR CCA 72 bp | ACAATTAAAAATTCTCTTGGGAAGACCATAGAACTCTaGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGAT | + |
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Preference number: 3 (lower is better) Translates to: TIKNSLGKTIEL*ETRGRSGVVYD Trigger: ATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTTAATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| 3UTR TCA 72 bp | GAAATTTATTTGTTCAAGGTTCAAACGCTGGCTCCATaGGCTGGAAATCAGGATTTTTCACATGGGTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: EIYLFKVQTLAP*AGNQDFSHGCP Trigger: TGGACACCCATGTGAAAAATCCTGATTTCCAGCTCATGGAGCCAGCGTTTGAACCTTGAACAAATAAATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCGGATCATCTCAGGCGTaGGGTCTCCGTTGGGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LWETRGRSGVVYDQERGLGSSQA*GLRWGR Trigger: ACGCCCCCAACGGAGACCTCACGCCTGAGATGATCC...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCTGGGGGCGTCTGTGGTaGCTGCCTGAGCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LWETRGRSGVVYDQERGLWGRLW*LPEPPL Trigger: AAGAGGAGGCTCAGGCAGCCACCACAGACGCCCCCA...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR GCA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCGGCGTCTGTGGTGGCTaGCTGAGCCTCCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWETRGRSGVVYDQERGLGVCGG*LSLLFF Trigger: GAAGAAGAGGAGGCTCAGGCAGCCACCACAGACGCC...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | CATGATTGTGATCCGAGTCAACATTTACATACCACTAAGTCTGTGTCTGTGGCAGCCGGGGCCACAGGCTaGGGTGGAGGCGGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HDCDPSQHLHTTKSVSVAAGATG*GGGGGW Trigger: CCAGCCTCCGCCTCCACCTCAGCCTGTGGCCCCGGC...TGCCACAGACACAGACTTAGTGGTATGTAAATGTTGACTCGGATCACAATCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCCCATCTGTCTGGTTCTaGGGCAGGTGGCAAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LWETRGRSGVVYDQERGLPSVWF*GRWQAS Trigger: AGATGCTTGCCACCTGCCCCAGAACCAGACAGATGG...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCCAGACTCCTCCACAATaGCTTCAACCGCCTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: LWETRGRSGVVYDQERGLQTPPQ*LQPPHL Trigger: AAGGTGAGGCGGTTGAAGCCATTGTGGAGGAGTCTG...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCCGCAGGCTCGGCATCTaGCTCCTTTTTGACTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: LWETRGRSGVVYDQERGLRRLGI*LLFDFN Trigger: GTTGAAGTCAAAAAGGAGCCAGATGCCGAGCCTGCG...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | CGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTGAGTGCGCTTGTGCATaGTCATGTGCCGCTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RGRSGVVYDQERGLNVSVECACA*SCAAPV Trigger: GACAGGAGCGGCACATGATCATGCACAAGCGCACTC...AACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCGATCTTCGACCTGAATaGTGGCTGTTGGCTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LWETRGRSGVVYDQERGLDLRPE*WLLAGS Trigger: AGAACCAGCCAACAGCCATCATTCAGGTCGAAGATC...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | GGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATGCCATCCTACTGGTGTGCACAAGCATCTTCTTCCTaGCCCCCTTCCCGGCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GKAFRTETDRSMPSYWCAQASSS*PPSRRL Trigger: GAGACGCCGGGAAGGGGGCCAGGAAGAAGATGCTTG...TGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCATGATGGCTGTTGGCTaGTTCTGTTTGGGCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LWETRGRSGVVYDQERGLMMAVG*FCLGWL Trigger: CAACCAGCCCAAACAGAACCAGCCAACAGCCATCAT...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | GTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTTCCATCTCGTTGGGGGCGTCTGTaGTGGCTGCCTGAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VLEWFTIKREGSMSLFPSRWGRL*WLPEPP Trigger: AGGAGGCTCAGGCAGCCACCACAGACGCCCCCAACG...AGATGGAAACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGCTGCACAAACTGCACTaGAACGGGCGCTCTCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: HRTLGNPWPFWSGLRSRELHKLH*NGRSPV Trigger: TACTGGAGAGCGCCCGTTCCAGTGCAGTTTGTGCAG...CTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGTCGAGGAGCTGTTTCTaGCGGAAGGTCTTGTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: HRTLGNPWPFWSGLRSRESRSCF*RKVLSQ Trigger: CTGCGACAAGACCTTCCGCCAGAAACAGCTCCTCGA...CTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGCCCCTCTACGCCATCTaGACCAGCACAGTTATCTGC | + |
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Preference number: 4 (lower is better) Translates to: HRTLGNPWPFWSGLRSREPLYAI*TSTVIC Trigger: GCAGATAACTGTGCTGGTCCAGATGGCGTAGAGGGG...CTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | CGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTTCTGTACACTGCTGTTaGCATCCTGGACCACCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RGRSGVVYDQERGLNVSVSVHCC*HPGPPH Trigger: GTGAGGTGGTCCAGGATGTCAACAGCAGTGTACAGA...AACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCCACACTGGTCACACTTaGAGCGCTTCTCATTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LWETRGRSGVVYDQERGLHTGHT*SASHFC Trigger: ACAAAAATGAGAAGCGCTTCAAGTGTGACCAGTGTG...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | CATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGTTGTGTTCCGGCGGGTaGATGTTTTCCCACACTTGG | + |
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Preference number: 4 (lower is better) Translates to: HRTLGNPWPFWSGLRSRELCSGG*MFSHTW Trigger: CCAAGTGTGGGAAAACATTCACCCGCCGGAACACAA...CTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGCTGGGGCTGAGGCTCTaGCTCAGGTTCAATTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: HRTLGNPWPFWSGLRSRELGLRL*LRFNFY Trigger: GTAGAAATTGAACCTGAGCCAGAGCCTCAGCCCCAG...CTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | CGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTCCACTGTACCCTCCATaGCTTCAGTCTTCATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RGRSGVVYDQERGLNVSVPLYPP*LQSSSG Trigger: TCCAGATGAAGACTGAAGTCATGGAGGGTACAGTGG...AACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | CGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTCACTTTTTCGGGCTATaGCAGTGTCACAATGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RGRSGVVYDQERGLNVSVHFFGL*QCHNGD Trigger: GTCCCCATTGTGACACTGTCATAGCCCGAAAAAGTG...AACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGATGGTTCTGGGGCAGGTaGCAAGCATCTTCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KNSLGKTIELWETRGRSGWFWGR*QASSSW Trigger: CCAGGAAGAAGATGCTTGCCACCTGCCCCAGAACCA...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGGCCATATCGCAGTCTaGGCACTTGTGAGGACGAGT | + |
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Preference number: 4 (lower is better) Translates to: KNSLGKTIELWETRGRSGGHIAV*ALVRTS Trigger: ACTCGTCCTCACAAGTGCCCAGACTGCGATATGGCC...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGATCTGTTTGGGCTGGTTaGTTCTTCCAGGAGGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: KNSLGKTIELWETRGRSGSVWAG*FFQEVA Trigger: GGCGACCTCCTGGAAGAACCAACCAGCCCAAACAGA...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGGGCGCTCTCCAGTATaGGAGCGAATGTGTCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: KNSLGKTIELWETRGRSGGRSPV*ERMCRF Trigger: AAAACGACACATTCGCTCTCATACTGGAGAGCGCCC...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR TCA 90 bp | AGGGCTCAATGTCTCTGTTTCCATCTAAGAAAACTAGTTAGGCATCAACACTGTTCTGTGGTGGCTGCCTaGGCCTCCTCTTCTTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RAQCLCFHLRKLVRHQHCSVVAA*ASSSSP Trigger: GGGGGAAGAAGAGGAGGCTCAGGCAGCCACCACAGA...ACAGTGTTGATGCCTAACTAGTTTTCTTAGATGGAAACAGAGACATTGAGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR GCA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGACCCTGCTGGCATAACTaGACAAACTGCACTGGAACG | + |
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Preference number: 4 (lower is better) Translates to: KNSLGKTIELWETRGRSGPCWHN*TNCTGT Trigger: CGTTCCAGTGCAGTTTGTGCAGTTATGCCAGCAGGG...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR GCA 90 bp | CGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTGCTTGTATGTGTCCCTaGTGGCATAACTGCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: RGRSGVVYDQERGLNVSVACMCP*WHNCTN Trigger: GTTTGTGCAGTTATGCCAGCAGGGACACATACAAGC...AACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR GCA 90 bp | GGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATGCCATCCTACTGGTGTGCAGTTATCTGCATGTCTTaGCATTGTGTTCCGGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: GKAFRTETDRSMPSYWCAVICMS*HCVPAG Trigger: ACCCGCCGGAACACAATGGCAAGACATGCAGATAAC...TGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | CGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTACTTCAGTCTTCATCTaGAGAAGGGTAGGATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RGRSGVVYDQERGLNVSVTSVFI*RRVGSS Trigger: GCTGGATCCTACCCTTCTCCAGATGAAGACTGAAGT...AACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | GGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATGCCATCCTACTGGTGTGCATTGGCTGGTTCTGTTTaGGCTGGTTGGTTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GKAFRTETDRSMPSYWCALAGSV*AGWFFQ Trigger: CTGGAAGAACCAACCAGCCCAAACAGAACCAGCCAA...TGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CCA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGCACCAATTCTCCACTaGTCACAAAGGCCATATCGC | + |
|
Preference number: 4 (lower is better) Translates to: KNSLGKTIELWETRGRSGAPILH*SQRPYR Trigger: GCGATATGGCCTTTGTGACCAGTGGAGAATTGGTGC...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR TCA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGAGGAGGGTCACTGTTCTaGATGCTCTGCCACACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRGGSLF*MLCHTD Trigger: ATCTGTGTGGCAGAGCATTCAGAACAGTGACCCTCC...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | GGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATGCCATCCTACTGGTGTGCAACACATCCACGTCTTTaGCCTCTTCTGTGTAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKAFRTETDRSMPSYWCATHPRL*PLLCNE Trigger: TTCGTTACACAGAAGAGGGCAAAGACGTGGATGTGT...TGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | CATGATTGTGATCCGAGTCAACATTTACATACCACTAAGTCTGTGTCTGTGGCATCTTGTCGCAGTGGCTaGAGGCATAAGGCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HDCDPSQHLHTTKSVSVASCRSG*RHKASP Trigger: GGGAGAAGCCTTATGCCTGCAGCCACTGCGACAAGA...TGCCACAGACACAGACTTAGTGGTATGTAAATGTTGACTCGGATCACAATCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | CATGATTGTGATCCGAGTCAACATTTACATACCACTAAGTCTGTGTCTGTGGCACTGCTGTTGACATCCTaGACCACCTCACCCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HDCDPSQHLHTTKSVSVALLLTS*TTSPPS Trigger: AGATGGGGGTGAGGTGGTCCAGGATGTCAACAGCAG...TGCCACAGACACAGACTTAGTGGTATGTAAATGTTGACTCGGATCACAATCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGACAGATGGCATTTGTGTaGTCTCTCATCAGTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNSLGKTIELWETRGRSGQMAFV*SLISVA Trigger: AGCCACACTGATGAGAGACCACACAAATGCCATCTG...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | CGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTGGGGACAATGAAATTTaGCCACATTTTCTGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRSGVVYDQERGLNVSVGDNEI*PHFLCA Trigger: AGCACACAGAAAATGTGGCCAAATTTCATTGTCCCC...AACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR TCA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGAGTGACGATCCAAATTTaGACGCCGGGGACATGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRVTIQI*TPGTCV Trigger: TACACATGTCCCCGGCGTTCAAATTTGGATCGTCAC...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR TCA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGTGTGGCTTTTCATGTaGCGATCCAAATTTGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: KNSLGKTIELWETRGRSGVWLFM*RSKFER Trigger: GCGTTCAAATTTGGATCGTCACATGAAAAGCCACAC...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR TCA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGAGTGTGTGTGTTCAGATaGTTCCTCAGGAGGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRVCVFR*FLRRVT Trigger: AGTGACCCTCCTGAGGAATCATCTGAACACACACAC...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR TCA 90 bp | GTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTTCCATCTGATCATGATAGCGCTTaGAATGCATGTCGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLEWFTIKREGSMSLFPSDHDSA*NACRGA Trigger: AGCTCCTCGACATGCATTTCAAGCGCTATCATGATC...AGATGGAAACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | GTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTTCCATCTGGGGACATGTGTAACTaGAAAGCTCACACTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VLEWFTIKREGSMSLFPSGDMCN*KAHTGM Trigger: CATTCCAGTGTGAGCTTTGCAGTTACACATGTCCCC...AGATGGAAACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | CATGATTGTGATCCGAGTCAACATTTACATACCACTAAGTCTGTGTCTGTGGCACATAACTGCACAAACTaGACTGGAACGGGCGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HDCDPSQHLHTTKSVSVAHNCTN*TGTGAL Trigger: GAGAGCGCCCGTTCCAGTGCAGTTTGTGCAGTTATG...TGCCACAGACACAGACTTAGTGGTATGTAAATGTTGACTCGGATCACAATCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | CATAGAACTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGTGCTTCTGTAAAATGTaGATCTTCATGGTACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HRTLGNPWPFWSGLRSRECFCKM*IFMVPL Trigger: GAGTGGTACCATGAAGATGCACATTTTACAGAAGCA...CTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAGTTCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | GTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTTCCATCTTGTATGTGTCCCTGCTaGCATAACTGCACAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLEWFTIKREGSMSLFPSCMCPC*HNCTNC Trigger: GCAGTTTGTGCAGTTATGCCAGCAGGGACACATACA...AGATGGAAACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATGCCATCCTACTGGTGTGCATGCTGCTTTCGCAAGTaGACACCCAAATCACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKAFRTETDRSMPSYWCACCFRK*TPKSLF Trigger: AAAAAGTGATTTGGGTGTCCACTTGCGAAAGCAGCA...TGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGATGGTTCTGTTTGGGCTaGTTGGTTCTTCCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRWFCLG*LVLPGG Trigger: ACCTCCTGGAAGAACCAACCAGCCCAAACAGAACCA...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCAATGTCTCTGTTTCCATCTAAGAAAACTAGTTAGGCATCAACACTGTTCTCCACTTCTCCATTaGCCCCCACTTTCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RAQCLCFHLRKLVRHQHCSPLLH*PPLSPP Trigger: AGGTGGTGAAAGTGGGGGCCAATGGAGAAGTGGAGA...ACAGTGTTGATGCCTAACTAGTTTTCTTAGATGGAAACAGAGACATTGAGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | CATGATTGTGATCCGAGTCAACATTTACATACCACTAAGTCTGTGTCTGTGGCACTGAATGATGGCTGTTaGCTGGTTCTGTTTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HDCDPSQHLHTTKSVSVALNDGC*LVLFGL Trigger: CAGCCCAAACAGAACCAGCCAACAGCCATCATTCAG...TGCCACAGACACAGACTTAGTGGTATGTAAATGTTGACTCGGATCACAATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCAATGTCTCTGTTTCCATCTAAGAAAACTAGTTAGGCATCAACACTGTCAACCTGCAAGGTTATaGTCTGGGTATCGTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RAQCLCFHLRKLVRHQHCQPARL*SGYRPL Trigger: CAGTGGACGATACCCAGATCATAACCTTGCAGGTTG...ACAGTGTTGATGCCTAACTAGTTTTCTTAGATGGAAACAGAGACATTGAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCAATGTCTCTGTTTCCATCTAAGAAAACTAGTTAGGCATCAACACTGTTGCAAGGTTATGATCTaGGTATCGTCCACTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAQCLCFHLRKLVRHQHCCKVMI*VSSTAA Trigger: GGCTGCAGTGGACGATACCCAGATCATAACCTTGCA...ACAGTGTTGATGCCTAACTAGTTTTCTTAGATGGAAACAGAGACATTGAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGACTGCAAAGCTCACACTaGAATGTTTTCTTTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: KNSLGKTIELWETRGRSGLQSSH*NVFFTP Trigger: AGGTGTAAAGAAAACATTCCAGTGTGAGCTTTGCAG...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCAATGTCTCTGTTTCCATCTAAGAAAACTAGTTAGGCATCAACACTGTCATCGGTTCACTTTCTaGAAGGCCCTCTTTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RAQCLCFHLRKLVRHQHCHRFTF*KALFRH Trigger: GTGTCTAAAGAGGGCCTTGCAGAAAGTGAACCGATG...ACAGTGTTGATGCCTAACTAGTTTTCTTAGATGGAAACAGAGACATTGAGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | GGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATGCCATCCTACTGGTGTGCACTGTGTAACGAAGTTTaGTCTTTTTGGTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKAFRTETDRSMPSYWCALCNEV*SFWFSL Trigger: CAAAGAAAACCAAAAAGAGCAAACTTCGTTACACAG...TGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCAATGTCTCTGTTTCCATCTAAGAAAACTAGTTAGGCATCAACACTGTTGGTGGCTGATAGTCTaGGTCTTTTTGCCAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAQCLCFHLRKLVRHQHCWWLIV*VFLPAR Trigger: TCTAGCTGGCAAAAAGACCCAGACTATCAGCCACCA...ACAGTGTTGATGCCTAACTAGTTTTCTTAGATGGAAACAGAGACATTGAGCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR TCA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGAATTTTTGATGCTGGATaGGAGCATATCGCTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRIFDAG*EHIAHE Trigger: TTCATGAGCGATATGCTCTCATCCAGCATCAAAAAT...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCAATGTCTCTGTTTCCATCTAAGAAAACTAGTTAGGCATCAACACTGTGACAGCAGTCCTTCCTaGTGTTCTTCCTCAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RAQCLCFHLRKLVRHQHCDSSPS*CSSSKS Trigger: TGATTTTGAGGAAGAACAGCAGGAAGGACTGCTGTC...ACAGTGTTGATGCCTAACTAGTTTTCTTAGATGGAAACAGAGACATTGAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | CATGATTGTGATCCGAGTCAACATTTACATACCACTAAGTCTGTGTCTGTGGCAACCAGCACAGTTATCTaGATGTCTTGCCATTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HDCDPSQHLHTTKSVSVATSTVI*MSCHCV Trigger: AACACAATGGCAAGACATGCAGATAACTGTGCTGGT...TGCCACAGACACAGACTTAGTGGTATGTAAATGTTGACTCGGATCACAATCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCAATGTCTCTGTTTCCATCTAAGAAAACTAGTTAGGCATCAACACTGTCTTCTCATTTTTGTGTaGTTTTTGATGCTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAQCLCFHLRKLVRHQHCLLIFV*FLMLDE Trigger: CTCATCCAGCATCAAAAATCACACAAAAATGAGAAG...ACAGTGTTGATGCCTAACTAGTTTTCTTAGATGGAAACAGAGACATTGAGCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCAATGTCTCTGTTTCCATCTAAGAAAACTAGTTAGGCATCAACACTGTTCCATATTTACAACCTaGAAGGTTATGATCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RAQCLCFHLRKLVRHQHCSIFTT*KVMIWV Trigger: TACCCAGATCATAACCTTGCAGGTTGTAAATATGGA...ACAGTGTTGATGCCTAACTAGTTTTCTTAGATGGAAACAGAGACATTGAGCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CAA 90 bp | CGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTGGCGTGAGGTCTCCGTaGGGGGCGTCTGTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRSGVVYDQERGLNVSVGVRSP*GASVVA Trigger: AGCCACCACAGACGCCCCCAACGGAGACCTCACGCC...AACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS CCA 90 bp | CCTGAGGAGGAAGCTCGCCCTGCTCTAGTGTCTCCACTTCTCCATTaGCCCCCACTTTCACCACCTGAAATCCTTCAGGCAAAGGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PEEEARPALVSPLLH*PPLSPPEILQAKVR Trigger: CCTTACCTTTGCCTGAAGGATTTCAGGTGGTGAAAGTGGGGGCCAATGGAGAAGTGGAGACACTAGAGCAGGGCGAGCTTCCTCCTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAGTTATCTGCATGTCTaGCCATTGTGTTCCGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LWETRGRSGVVYDQERGLSYLHV*PLCSGG Trigger: CCCGCCGGAACACAATGGCAAGACATGCAGATAACT...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCTGTGACGATCCAAATTaGAACGCCGGGGACATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LWETRGRSGVVYDQERGLCDDPN*NAGDMC Trigger: ACACATGTCCCCGGCGTTCAAATTTGGATCGTCACA...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CAA 90 bp | GGCAAAGCTTTCAGGACAGAAACTGATCGTAGCATGCCATCCTACTGGTGTGCAGTCTCCACTTCTCCATaGGCCCCCACTTTCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: GKAFRTETDRSMPSYWCAVSTSP*APTFTT Trigger: GGTGGTGAAAGTGGGGGCCAATGGAGAAGTGGAGAC...TGCACACCAGTAGGATGGCATGCTACGATCAGTTTCTGTCCTGAAAGCTTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCATATGCCTTTTCAGCTaGTATGTGTCCCTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LWETRGRSGVVYDQERGLICLFS*YVSLLA Trigger: TGCCAGCAGGGACACATACAAGCTGAAAAGGCATAT...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS GCA 90 bp | TACAACCTGCAAGGTTATGATCTGGGTATCGTCCACTGCAGCCTCTaGTTCCGGAGCCACTGTACCCTCCATGACTTCAGTCTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: YNLQGYDLGIVHCSL*FRSHCTLHDFSLHL Trigger: CAGATGAAGACTGAAGTCATGGAGGGTACAGTGGCTCCGGAAGCAGAGGCTGCAGTGGACGATACCCAGATCATAACCTTGCAGGTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CAA 90 bp | CGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTCACAGGAACAGGTACTaGGACAAGCTGAAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGRSGVVYDQERGLNVSVHRNRY*DKLKLS Trigger: GGAGAGCTTCAGCTTGTCCAAGTACCTGTTCCTGTG...AACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGAAACCCGTGGCCGTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCTCACACTGGTCACACTaGAAGCGCTTCTCATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWETRGRSGVVYDQERGLSHWSH*KRFSFL Trigger: CAAAAATGAGAAGCGCTTCAAGTGTGACCAGTGTGA...GAGCCCTCTCTCTTGATCGTAAACCACTCCAGAACGGCCACGGGTTTCCCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS TCA 90 bp | AACAGACAAAGGCAGCAGGGACAAAGTTGGGATCATGATAGCGCTTaGAATGCATGTCGAGGAGCTGTTTCTGGCGGAAGGTCTTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: NRQRQQGQSWDHDSA*NACRGAVSGGRSCR Trigger: GCGACAAGACCTTCCGCCAGAAACAGCTCCTCGACATGCATTTCAAGCGCTATCATGATCCCAACTTTGTCCCTGCTGCCTTTGTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS GCA 90 bp | CTCCATATTTACAACCTGCAAGGTTATGATCTGGGTATCGTCCACTaGAGCCTCTGCTTCCGGAGCCACTGTACCCTCCATGACTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LHIYNLQGYDLGIVH*SLCFRSHCTLHDFS Trigger: ACTGAAGTCATGGAGGGTACAGTGGCTCCGGAAGCAGAGGCTGCAGTGGACGATACCCAGATCATAACCTTGCAGGTTGTAAATATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS CCA 90 bp | TCTCATGAGTGTGTTTATAACGACGATGCCGCACCAATTCTCCACTaGTCACAAAGGCCATATCGCAGTCTGGGCACTTGTGAGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHECVYNDDAAPILH*SQRPYRSLGTCEDE Trigger: CTCGTCCTCACAAGTGCCCAGACTGCGATATGGCCTTTGTGACCAGTGGAGAATTGGTGCGGCATCGTCGTTATAAACACACTCATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CAA 90 bp | AAAAATTCTCTTGGGAAGACCATAGAACTCTGGGAAACCCGTGGCCGTTCTGGATTCTGTTTGGGCTGGTaGGTTCTTCCAGGAGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KNSLGKTIELWETRGRSGFCLGW*VLPGGR Trigger: GCGACCTCCTGGAAGAACCAACCAGCCCAAACAGAA...TCCAGAACGGCCACGGGTTTCCCAGAGTTCTATGGTCTTCCCAAGAGAATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS-3UTR CAA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGATCCTCCTCCTCCTCATaGTCATCGAGATCCGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRSSSSS*SSRSGS Trigger: TGAGCCGGATCTCGATGACAATGAGGAGGAGGAGGA...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
||
| CDS TCA 90 bp | GTGTGGTCTCTCATCAGTGTGGCTTTTCATGTGACGATCCAAATTTaGACGCCGGGGACATGTGTAACTGCAAAGCTCACACTGGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: VWSLISVAFHVTIQI*TPGTCVTAKLTLEC Trigger: ACATTCCAGTGTGAGCTTTGCAGTTACACATGTCCCCGGCGTTCAAATTTGGATCGTCACATGAAAAGCCACACTGATGAGAGACCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CAA 90 bp | GTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTTCCATCTCCACACAGATGGCATTaGTGTGGTCTCTCATCAGTG | + |
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Preference number: 5 (lower is better) Translates to: VLEWFTIKREGSMSLFPSPHRWH*CGLSSV Trigger: CACTGATGAGAGACCACACAAATGCCATCTGTGTGG...AGATGGAAACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CAA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGAGTTGGCTGGTTCTGTTaGGGCTGGTTGGTTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRVGWFC*GWLVLP Trigger: TGGAAGAACCAACCAGCCCAAACAGAACCAGCCAAC...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 90 bp | GTAGTAGCAACAGGTACCGTCACAGGAACAGGTACTTGGACAAGCTaGAGCTCTCCTATGTTAATGGGCTGTTCCTCCATATTTACAACC | + |
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Preference number: 5 (lower is better) Translates to: VVATGTVTGTGTWTS*SSPMLMGCSSIFTT Trigger: GGTTGTAAATATGGAGGAACAGCCCATTAACATAGGAGAGCTTCAGCTTGTCCAAGTACCTGTTCCTGTGACGGTACCTGTTGCTACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CAA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGACTCGTTTGCTCTTCTTaGTCTCCCCTCCATTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRLVCSS*SPLHFP Trigger: GGGAAAATGGAGGGGAGACAAAGAAGAGCAAACGAG...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CAA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGAATAGTCTGGGTCTTTTaGCCAGCTAGAGTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRIVWVF*PARVFL Trigger: CAGGAAGACTCTAGCTGGCAAAAAGACCCAGACTAT...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CAA 90 bp | GTTAGGCATCAACACTGTCCTCAACACTTCACAGTAAACCCTCAGAGACTTAGACTTTTTCTTCCTCGTTaGCTCTTCTTTGTCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: VRHQHCPQHFTVNPQRLRLFLPR*LFFVSP Trigger: AGGGGAGACAAAGAAGAGCAAACGAGGAAGAAAAAG...TCTAAGTCTCTGAGGGTTTACTGTGAAGTGTTGAGGACAGTGTTGATGCCTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS-3UTR CAA 90 bp | GTTCTGGAGTGGTTTACGATCAAGAGAGAGGGCTCAATGTCTCTGTTTCCATCTGCATCTGGCTCCTTTTaGACTTCAACTATAATGTTC | + |
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Preference number: 5 (lower is better) Translates to: VLEWFTIKREGSMSLFPSASGSF*TSTIMF Trigger: GAACATTATAGTTGAAGTCAAAAAGGAGCCAGATGC...AGATGGAAACAGAGACATTGAGCCCTCTCTCTTGATCGTAAACCACTCCAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 90 bp | AGCATAATCACACTGGTCACACTTGAAGCGCTTCTCATTTTTGTGTaGTTTTTGATGCTGGATGAGAGCATATCGCTCATGAAACACAGC | + |
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Preference number: 5 (lower is better) Translates to: SIITLVTLEALLIFV*FLMLDESISLMKHS Trigger: GCTGTGTTTCATGAGCGATATGCTCTCATCCAGCATCAAAAATCACACAAAAATGAGAAGCGCTTCAAGTGTGACCAGTGTGATTATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS GCA 90 bp | AATTTTTGTTGGCTTCGGAGGCTTCATATTACCAACTACTTTCTCTaGATTAACCTCAGACAGCAGTCCTTCCTGCTGTTCTTCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: NFCWLRRLHITNYFL*INLRQQSFLLFFLK Trigger: TTTGAGGAAGAACAGCAGGAAGGACTGCTGTCTGAGGTTAATGCAGAGAAAGTAGTTGGTAATATGAAGCCTCCGAAGCCAACAAAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS GCA 72 bp | CAAGGTTATGATCTGGGTATCGTCCACTGCAGCCTCTaGTTCCGGAGCCACTGTACCCTCCATGACTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: QGYDLGIVHCSL*FRSHCTLHDFS Trigger: ACTGAAGTCATGGAGGGTACAGTGGCTCCGGAAGCAGAGGCTGCAGTGGACGATACCCAGATCATAACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS GCA 72 bp | TTCCCCCTCTACGCCATCTGGACCAGCACAGTTATCTaGATGTCTTGCCATTGTGTTCCGGCGGGTGAATGT | + |
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Preference number: 6 (lower is better) Translates to: FPLYAIWTSTVI*MSCHCVPAGEC Trigger: ACATTCACCCGCCGGAACACAATGGCAAGACATGCAGATAACTGTGCTGGTCCAGATGGCGTAGAGGGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 72 bp | CCAGCTGTTCCATCATTACCATCTGTACACTGCTGTTaGCATCCTGGACCACCTCACCCCCATCTGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: PAVPSLPSVHCC*HPGPPHPHLSG Trigger: ACCAGACAGATGGGGGTGAGGTGGTCCAGGATGTCAACAGCAGTGTACAGATGGTAATGATGGAACAGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 72 bp | AGGCAGCAGGGACAAAGTTGGGATCATGATAGCGCTTaGAATGCATGTCGAGGAGCTGTTTCTGGCGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RQQGQSWDHDSA*NACRGAVSGGR Trigger: CCTTCCGCCAGAAACAGCTCCTCGACATGCATTTCAAGCGCTATCATGATCCCAACTTTGTCCCTGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS CAA 72 bp | TCCAGCTGTTCCATCATTACCATCTGTACACTGCTGTaGACATCCTGGACCACCTCACCCCCATCTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSCSIITICTLL*TSWTTSPPSVW Trigger: CCAGACAGATGGGGGTGAGGTGGTCCAGGATGTCAACAGCAGTGTACAGATGGTAATGATGGAACAGCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 72 bp | TGGGCTGTTCCTCCATATTTACAACCTGCAAGGTTATaGTCTGGGTATCGTCCACTGCAGCCTCTGCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: WAVPPYLQPARL*SGYRPLQPLLP Trigger: CGGAAGCAGAGGCTGCAGTGGACGATACCCAGATCATAACCTTGCAGGTTGTAAATATGGAGGAACAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS GCA 72 bp | TACGCCATCTGGACCAGCACAGTTATCTGCATGTCTTaGCATTGTGTTCCGGCGGGTGAATGTTTTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: YAIWTSTVICMS*HCVPAGECFPT Trigger: TGTGGGAAAACATTCACCCGCCGGAACACAATGGCAAGACATGCAGATAACTGTGCTGGTCCAGATGGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS CCA 72 bp | TGTTCCTCCATATTTACAACCTGCAAGGTTATGATCTaGGTATCGTCCACTGCAGCCTCTGCTTCCGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: CSSIFTTCKVMI*VSSTAASASGA Trigger: GGCTCCGGAAGCAGAGGCTGCAGTGGACGATACCCAGATCATAACCTTGCAGGTTGTAAATATGGAGGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS CCA 72 bp | TGTGTTTATAACGACGATGCCGCACCAATTCTCCACTaGTCACAAAGGCCATATCGCAGTCTGGGCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: CVYNDDAAPILH*SQRPYRSLGTC Trigger: ACAAGTGCCCAGACTGCGATATGGCCTTTGTGACCAGTGGAGAATTGGTGCGGCATCGTCGTTATAAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS CCA 72 bp | AGCCTCCTCTTCTTCCCCCTCCGCAGGCTCGGCATCTaGCTCCTTTTTGACTTCAACTATAATGTTCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: SLLFFPLRRLGI*LLFDFNYNVLN Trigger: ATTGAGAACATTATAGTTGAAGTCAAAAAGGAGCCAGATGCCGAGCCTGCGGAGGGGGAAGAAGAGGAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 72 bp | ACAGGTACCGTCACAGGAACAGGTACTTGGACAAGCTaGAGCTCTCCTATGTTAATGGGCTGTTCCTCCATA | + |
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Preference number: 6 (lower is better) Translates to: TGTVTGTGTWTS*SSPMLMGCSSI Trigger: TATGGAGGAACAGCCCATTAACATAGGAGAGCTTCAGCTTGTCCAAGTACCTGTTCCTGTGACGGTACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 72 bp | CTGCACAAACTGCACTGGAACGGGCGCTCTCCAGTATaGGAGCGAATGTGTCGTTTTAATTTGCTGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LHKLHWNGRSPV*ERMCRFNLLTS Trigger: AGAAGTCAGCAAATTAAAACGACACATTCGCTCTCATACTGGAGAGCGCCCGTTCCAGTGCAGTTTGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 72 bp | AGTTATCTGCATGTCTTGCCATTGTGTTCCGGCGGGTaGATGTTTTCCCACACTTGGAACAGACAAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SYLHVLPLCSGG*MFSHTWNRQRQ Trigger: CTGCCTTTGTCTGTTCCAAGTGTGGGAAAACATTCACCCGCCGGAACACAATGGCAAGACATGCAGATAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS CAA 72 bp | TCTTCCCCCTCCGCAGGCTCGGCATCTGGCTCCTTTTaGACTTCAACTATAATGTTCTCAATTGCACCTGTA | + |
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Preference number: 6 (lower is better) Translates to: SSPSAGSASGSF*TSTIMFSIAPV Trigger: TACAGGTGCAATTGAGAACATTATAGTTGAAGTCAAAAAGGAGCCAGATGCCGAGCCTGCGGAGGGGGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS CAA 90 bp | TGTGTGGTCTCTCATCAGTGTGGCTTTTCATGTGACGATCCAAATTaGAACGCCGGGGACATGTGTAACTGCAAAGCTCACACTGGAATG | + |
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Preference number: 6 (lower is better) Translates to: CVVSHQCGFSCDDPN*NAGDMCNCKAHTGM Trigger: CATTCCAGTGTGAGCTTTGCAGTTACACATGTCCCCGGCGTTCAAATTTGGATCGTCACATGAAAAGCCACACTGATGAGAGACCACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 72 bp | CACTTCATTCTCATAAGCCCCCTGAAGTTCTTCTACTaGAGTAGTAGCAACAGGTACCGTCACAGGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: HFILISPLKFFY*SSSNRYRHRNR Trigger: CCTGTTCCTGTGACGGTACCTGTTGCTACTACTTCAGTAGAAGAACTTCAGGGGGCTTATGAGAATGAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 72 bp | CTCATCAGTGTGGCTTTTCATGTGACGATCCAAATTTaGACGCCGGGGACATGTGTAACTGCAAAGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: LISVAFHVTIQI*TPGTCVTAKLT Trigger: TGTGAGCTTTGCAGTTACACATGTCCCCGGCGTTCAAATTTGGATCGTCACATGAAAAGCCACACTGATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS GCA 72 bp | CCTATGTTAATGGGCTGTTCCTCCATATTTACAACCTaGAAGGTTATGATCTGGGTATCGTCCACTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PMLMGCSSIFTT*KVMIWVSSTAA Trigger: GGCTGCAGTGGACGATACCCAGATCATAACCTTGCAGGTTGTAAATATGGAGGAACAGCCCATTAACATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS GCA 72 bp | TGGCTTCGGAGGCTTCATATTACCAACTACTTTCTCTaGATTAACCTCAGACAGCAGTCCTTCCTGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: WLRRLHITNYFL*INLRQQSFLLF Trigger: GAACAGCAGGAAGGACTGCTGTCTGAGGTTAATGCAGAGAAAGTAGTTGGTAATATGAAGCCTCCGAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS CAA 72 bp | TCTCATCAGTGTGGCTTTTCATGTGACGATCCAAATTaGAACGCCGGGGACATGTGTAACTGCAAAGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SHQCGFSCDDPN*NAGDMCNCKAH Trigger: GTGAGCTTTGCAGTTACACATGTCCCCGGCGTTCAAATTTGGATCGTCACATGAAAAGCCACACTGATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS GCA 72 bp | ACTTTCTCTGCATTAACCTCAGACAGCAGTCCTTCCTaGTGTTCTTCCTCAAAATCATACACAGACACATCC | + |
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Preference number: 6 (lower is better) Translates to: TFSALTSDSSPS*CSSSKSYTDTS Trigger: GGATGTGTCTGTGTATGATTTTGAGGAAGAACAGCAGGAAGGACTGCTGTCTGAGGTTAATGCAGAGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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| CDS TCA 72 bp | ACACTGGTCACACTTGAAGCGCTTCTCATTTTTGTGTaGTTTTTGATGCTGGATGAGAGCATATCGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: TLVTLEALLIFV*FLMLDESISLM Trigger: CATGAGCGATATGCTCTCATCCAGCATCAAAAATCACACAAAAATGAGAAGCGCTTCAAGTGTGACCAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000005841.16 |
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