Pregenerated sensors for CTBS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028189Ensembl transcript IDs: ENSMUST00000029840.4, ENSMUST00000061937.13, ENSMUST00000196609.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTaGATCAGATCCTCTGGAACTGGGGTTGTGACCAACCATGTAGTT | + |
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Preference number: 1 (lower is better) Translates to: ICMDVCPCTMCVQEE*IRSSGTGVVTNHVV Trigger: AACTACATGGTTGGTCACAACCCCAGTTCCAGAGGATCTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR GCA 90 bp | GCTCTGACCTGCGAGCCAGCGCTCCAGCCCAGTAACTGTGTTGATTaGTTTGAGAAAGGAAACAAGAACTGCTTTATGCTAGACATTTAT | + |
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Preference number: 1 (lower is better) Translates to: ALTCEPALQPSNCVD*FEKGNKNCFMLDIY Trigger: ATAAATGTCTAGCATAAAGCAGTTCTTGTTTCCTTTCTCAAAGCAATCAACACAGTTACTGGGCTGGAGCGCTGGCTCGCAGGTCAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR TCA 90 bp | CATACGCTGTCTAAATGTCTAAGTGACACTAATGTGTGTATGTCCTaGAATATTCATATGTACTGTAAGAAATCAGGAACCAGAAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: HTLSKCLSDTNVCMS*NIHMYCKKSGTRKA Trigger: GGCTTTTCTGGTTCCTGATTTCTTACAGTACATATGAATATTTCAGGACATACACACATTAGTGTCACTTAGACATTTAGACAGCGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR GCA 90 bp | TTTATTATAATATTCTATACATGTGTGTATCATACTGTGGTCATGTaGACTCCCTTCCCCATTATCTTCACTTGTCTACCAGTTGCACAT | + |
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Preference number: 1 (lower is better) Translates to: FIIIFYTCVYHTVVM*TPFPIIFTCLPVAH Trigger: ATGTGCAACTGGTAGACAAGTGAAGATAATGGGGAAGGGAGTGCACATGACCACAGTATGATACACACATGTATAGAATATTATAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR TCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGACAAGTCTGATAGTCTaGCAAAAGATGCCCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: ADPGSKLSPGSPQVALVQTSLIV*QKMPLS Trigger: GGAGAGGGGCATCTTTTGTCAGACTATCAGACTTGT...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR TCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGAGACTCAGCAGCAGCTaGCCCTGGCAGCAAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQRLSSS*PWQQAL Trigger: GAGAGCTTGCTGCCAGGGTCAGCTGCTGCTGAGTCT...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR GCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGCGCATTCCATTTGCATaGCTATCTTTATGTCATACG | + |
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Preference number: 2 (lower is better) Translates to: ADPGSKLSPGSPQVALVQRIPFA*LSLCHT Trigger: CGTATGACATAAAGATAGGCATGCAAATGGAATGCG...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR GCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGCTCTCGCATTCCATTTaGATGCCTATCTTTATGTCA | + |
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Preference number: 2 (lower is better) Translates to: ADPGSKLSPGSPQVALVQLSHSI*MPIFMS Trigger: TGACATAAAGATAGGCATGCAAATGGAATGCGAGAG...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR TCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGTGGGCGACTGCAGGGTaGACAGTGACTAGGGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQWATAG*TVTRVR Trigger: TCTGACCCTAGTCACTGTTCACCCTGCAGTCGCCCA...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR GCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGGAACCAGAAAAGCCATaGCTACTCATTCAACATAAA | + |
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Preference number: 2 (lower is better) Translates to: ADPGSKLSPGSPQVALVQEPEKP*LLIQHK Trigger: TTTATGTTGAATGAGTAGGCATGGCTTTTCTGGTTC...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR GCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGCATACTGTGGTCATGTaGACTCCCTTCCCCATTATC | + |
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Preference number: 2 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQHTVVM*TPFPII Trigger: GATAATGGGGAAGGGAGTGCACATGACCACAGTATG...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTGGGTCATATTTTCCAAAAGCTGCCACAGTTGTAATCTGTGACCAGTCACCATATGTCAGGCAGTaGGCACTGAGTGTAATACGA | + |
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Preference number: 2 (lower is better) Translates to: SSGSYFPKAATVVICDQSPYVRQ*ALSVIR Trigger: TCGTATTACACTCAGTGCCCACTGCCTGACATATGG...TGACTGGTCACAGATTACAACTGTGGCAGCTTTTGGAAAATATGACCCAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
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| 3UTR-3UTR TCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCACAAGTCTGATAGTCTaGCAAAAGATGCCCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PIWKGIICKEDRPYVMEFTSLIV*QKMPLS Trigger: GGAGAGGGGCATCTTTTGTCAGACTATCAGACTTGT...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR TCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGTGTGTCCAAAGCCAGTaGTTTCCATTTCAAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQCVQSQ*FPFQVT Trigger: TGTAACTTGAAATGGAAATCACTGGCTTTGGACACA...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR GCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACACATACTGTGGTCATGTaGACTCCCTTCCCCATTATC | + |
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Preference number: 2 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTHTVVM*TPFPII Trigger: GATAATGGGGAAGGGAGTGCACATGACCACAGTATG...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR GCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGCGCATTCCATTTGCATaGCTATCTTTATGTCATACG | + |
|
Preference number: 2 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQRIPFA*LSLCHT Trigger: CGTATGACATAAAGATAGGCATGCAAATGGAATGCG...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR GCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGCTCTCGCATTCCATTTaGATGCCTATCTTTATGTCA | + |
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Preference number: 2 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQLSHSI*MPIFMS Trigger: TGACATAAAGATAGGCATGCAAATGGAATGCGAGAG...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR CCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCGTGAATCAGATCCTCTaGAACTGGGGTTGTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: PIWKGIICKEDRPYVMEFVNQIL*NWGCDQ Trigger: TTGGTCACAACCCCAGTTCCAGAGGATCTGATTCAC...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR GCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGAGTAACTGTGTTGATTaGTTTGAGAAAGGAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQSNCVD*FEKGNK Trigger: CTTGTTTCCTTTCTCAAAGCAATCAACACAGTTACT...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR GCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCCATGTACCATGTGTGTaGAGGAAGAGTGAATCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PIWKGIICKEDRPYVMEFHVPCV*RKSESD Trigger: ATCTGATTCACTCTTCCTGCACACACATGGTACATG...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTGCTTCATATTCAGGTGATGAGCAGTTAACTTCTTGCTCTATGTCTATACTTTTAGCACTACCCTaGCTCCTTTTGAATGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: VSASYSGDEQLTSCSMSILLALP*LLLNEH Trigger: ATGCTCATTCAAAAGGAGCCAGGGTAGTGCTAAAAG...TATAGACATAGAGCAAGAAGTTAACTGCTCATCACCTGAATATGAAGCACTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGACCAGAGCTGTCAGTGCTTCATATTCAGGTGATGAGCAGTTAACTTCTCCATATACTGTGCTTTaGCTAAATCAACTTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SLTRAVSASYSGDEQLTSPYTVL*LNQLSE Trigger: CTCAGAAAGTTGATTTAGCCAAAGCACAGTATATGG...AGAAGTTAACTGCTCATCACCTGAATATGAAGCACTGACAGCTCTGGTCAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
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| 3UTR-3UTR TCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCTGTGTCCAAAGCCAGTaGTTTCCATTTCAAGTTACA | + |
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Preference number: 2 (lower is better) Translates to: PIWKGIICKEDRPYVMEFCVQSQ*FPFQVT Trigger: TGTAACTTGAAATGGAAATCACTGGCTTTGGACACA...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR TCA 90 bp | GCTTCATATTCAGGTGATGAGCAGTTAACTTCTTGCTCTATGTCTATATTAATCTACCCTGGCTCCTTTTaGATGAGCATAGCACATAAG | + |
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Preference number: 2 (lower is better) Translates to: ASYSGDEQLTSCSMSILIYPGSF*MSIAHK Trigger: CTTATGTGCTATGCTCATTCAAAAGGAGCCAGGGTA...GATTAATATAGACATAGAGCAAGAAGTTAACTGCTCATCACCTGAATATGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCATATTCAGGTGATGAGCAGTTAACTTCTTGCTCTATGTCTATATTAATCCTGAGCTATCCACGATaGTCTGAAGGTAGGATCAAT | + |
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Preference number: 2 (lower is better) Translates to: ASYSGDEQLTSCSMSILILSYPR*SEGRIN Trigger: ATTGATCCTACCTTCAGAGCATCGTGGATAGCTCAG...GATTAATATAGACATAGAGCAAGAAGTTAACTGCTCATCACCTGAATATGAAGC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
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| 3UTR TCA 72 bp | CCCGTGAGGGACCCTGGGCGACTGCAGGGTGAACAGTaGCTAGGGTCAGACTCAGCAGCAGCTGACCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PVRDPGRLQGEQ*LGSDSAAADPG Trigger: GCCAGGGTCAGCTGCTGCTGAGTCTGACCCTAGTCACTGTTCACCCTGCAGTCGCCCAGGGTCCCTCACGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR GCA 72 bp | ACCCAAGTCCTCTGGAGGAGAGCCAGTGCTCTGACCTaGGAGCCAGCGCTCCAGCCCAGTAACTGTGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: TQVLWRRASALT*EPALQPSNCVD Trigger: ATCAACACAGTTACTGGGCTGGAGCGCTGGCTCGCAGGTCAGAGCACTGGCTCTCCTCCAGAGGACTTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR TCA 72 bp | AATGTGAAAAGTAGGCAAGCAGTGAGTGTTAGCCCGTaGGGGACCCTGGGCGACTGCAGGGTGAACAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: NVKSRQAVSVSP*GTLGDCRVNSD Trigger: GTCACTGTTCACCCTGCAGTCGCCCAGGGTCCCTCACGGGCTAACACTCACTGCTTGCCTACTTTTCACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR TCA 72 bp | AACTGGGGTTGTGACCAACCATGTAGTTCTGGGAACTaGACCCAAGTCCTCTGGAGGAGAGCCAGTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: NWGCDQPCSSGN*TQVLWRRASAL Trigger: CAGAGCACTGGCTCTCCTCCAGAGGACTTGGGTTCAGTTCCCAGAACTACATGGTTGGTCACAACCCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR TCA 72 bp | GACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTaGATCAGATCCTCTGGAACTGGGGTTGTGACCAAC | + |
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Preference number: 3 (lower is better) Translates to: DVCPCTMCVQEE*IRSSGTGVVTN Trigger: GTTGGTCACAACCCCAGTTCCAGAGGATCTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR CCA 72 bp | TACCATGTGTGTGCAGGAAGAGTGAATCAGATCCTCTaGAACTGGGGTTGTGACCAACCATGTAGTTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: YHVCAGRVNQIL*NWGCDQPCSSG Trigger: CCCAGAACTACATGGTTGGTCACAACCCCAGTTCCAGAGGATCTGATTCACTCTTCCTGCACACACATGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR GCA 72 bp | TTATATGCATGGACGTATGTCCATGTACCATGTGTGTaGAGGAAGAGTGAATCAGATCCTCTGGAACTGGGG | + |
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Preference number: 3 (lower is better) Translates to: LYAWTYVHVPCV*RKSESDPLELG Trigger: CCCCAGTTCCAGAGGATCTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR CCA 72 bp | ATCCAGATACTTGAACCACCTCCATATGTCAGGCAGTaGGCACTGAGTGTAATACGAAGACATCAGGTTACC | + |
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Preference number: 3 (lower is better) Translates to: IQILEPPPYVRQ*ALSVIRRHQVT Trigger: GGTAACCTGATGTCTTCGTATTACACTCAGTGCCCACTGCCTGACATATGGAGGTGGTTCAAGTATCTGGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
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| 3UTR TCA 72 bp | TGCCAGGAAAACAGGGGTAGACACTGGCACTTAAACTaGGGCTATCATACTGACATCCAGATACTTGAACCA | + |
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Preference number: 3 (lower is better) Translates to: CQENRGRHWHLN*GYHTDIQILEP Trigger: TGGTTCAAGTATCTGGATGTCAGTATGATAGCCTCAGTTTAAGTGCCAGTGTCTACCCCTGTTTTCCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
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| 3UTR GCA 72 bp | GGCATCCCTCAGTTATCCTCTCGCATTCCATTTGCATaGCTATCTTTATGTCATACGCTGTCTAAATGTCTA | + |
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Preference number: 3 (lower is better) Translates to: GIPQLSSRIPFA*LSLCHTLSKCL Trigger: TAGACATTTAGACAGCGTATGACATAAAGATAGGCATGCAAATGGAATGCGAGAGGATAACTGAGGGATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR CAA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGACTGTGTTGATTGCTTaGAGAAAGGAAACAAGAACT | + |
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Preference number: 3 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQTVLIA*RKETRT Trigger: AGTTCTTGTTTCCTTTCTCAAAGCAATCAACACAGT...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR CAA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCCCCCATTATCTTCACTaGTCTACCAGTTGCACATTT | + |
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Preference number: 3 (lower is better) Translates to: PIWKGIICKEDRPYVMEFPHYLH*STSCTF Trigger: AAATGTGCAACTGGTAGACAAGTGAAGATAATGGGG...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR CAA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACACCCCATTATCTTCACTaGTCTACCAGTTGCACATTT | + |
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Preference number: 3 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTPHYLH*STSCTF Trigger: AAATGTGCAACTGGTAGACAAGTGAAGATAATGGGG...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR-3UTR CAA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCAGCCCAGTAACTGTGTaGATTGCTTTGAGAAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: PIWKGIICKEDRPYVMEFSPVTV*IALRKE Trigger: TTCCTTTCTCAAAGCAATCAACACAGTTACTGGGCT...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR GCA 72 bp | ATATTCTATACATGTGTGTATCATACTGTGGTCATGTaGACTCCCTTCCCCATTATCTTCACTTGTCTACCA | + |
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Preference number: 3 (lower is better) Translates to: IFYTCVYHTVVM*TPFPIIFTCLP Trigger: TGGTAGACAAGTGAAGATAATGGGGAAGGGAGTGCACATGACCACAGTATGATACACACATGTATAGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR GCA 72 bp | ATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATaGCTACTCATTCAACATAAACTGCTTCTCAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: ICTVRNQEPEKP*LLIQHKLLLKG Trigger: GCCTTTGAGAAGCAGTTTATGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| 3UTR TCA 72 bp | CAAAGGCTAAGTTTTAAAGACTGTGTCCAAAGCCAGTaGTTTCCATTTCAAGTTACACATAGTTCTTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: QRLSFKDCVQSQ*FPFQVTHSSCW Trigger: CCAACAAGAACTATGTGTAACTTGAAATGGAAATCACTGGCTTTGGACACAGTCTTTAAAACTTAGCCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS-3UTR CCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGCGGTGGCGGATCGGTTaGCAGAGAGCAGCCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ADPGSKLSPGSPQVALVQRWRIG*QRAASE Trigger: CTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCG...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS-3UTR GCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGAGTTTGCATTCCACATaGCAATGCCCCGCAAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: ADPGSKLSPGSPQVALVQSLHST*QCPASR Trigger: ACGGCTTGCGGGGCATTGGCATGTGGAATGCAAACT...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS-3UTR TCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGGTCTATGCGCTTTGGTaGCCAAGCTACATCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: ADPGSKLSPGSPQVALVQVYALW*PSYIKG Trigger: ACCTTTGATGTAGCTTGGTCACCAAAGCGCATAGAC...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS-3UTR TCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGGGCTGCAATACATTCTaGCCAGATCTGACTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADPGSKLSPGSPQVALVQGCNTF*PDLTLL Trigger: GAGCAAAGTCAGATCTGGTCAGAATGTATTGCAGCC...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGTACCCTGGCTCCTTTTaGATGAGCATAGCACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: ADPGSKLSPGSPQVALVQYPGSF*MSIAHK Trigger: CTTATGTGCTATGCTCATTCAAAAGGAGCCAGGGTA...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGGCAAGCCGTAGTTTTTaGCATATGCTGCCTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ADPGSKLSPGSPQVALVQASRSF*HMLPLV Trigger: CACTAAAGGCAGCATATGTCAAAAACTACGGCTTGC...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR GCA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGGTAGTCAAGACAGTTTaGATTCCACATGCCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADPGSKLSPGSPQVALVQVVKTV*IPHANA Trigger: GGCATTGGCATGTGGAATGCAAACTGTCTTGACTAC...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCCGGTGGCGGATCGGTTaGCAGAGAGCAGCCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIWKGIICKEDRPYVMEFRWRIG*QRAASE Trigger: CTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCG...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | AGCATAGCACATAAGTTCTGGGTCATATTTTCCAAAAGCTGCCACAGTTGTAATCGGTGGCGGATCGGTTaGCAGAGAGCAGCCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIAHKFWVIFSKSCHSCNRWRIG*QRAASE Trigger: CTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCG...ATTACAACTGTGGCAGCTTTTGGAAAATATGACCCAGAACTTATGTGCTATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
||
| CDS-3UTR GCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCGGGCACTTGATGGCCTaGAGCATCGCTACAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PIWKGIICKEDRPYVMEFGHLMA*SIATRS Trigger: GCTCCTTGTAGCGATGCTGCAGGCCATCAAGTGCCC...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGGTCTATGCGCTTTGGTaGCCAAGCTACATCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQVYALW*PSYIKG Trigger: ACCTTTGATGTAGCTTGGTCACCAAAGCGCATAGAC...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGGATTGTAGGGAGCATTaGCGGCTGCAATACATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQDCREH*RLQYIL Trigger: CAGAATGTATTGCAGCCGCCAATGCTCCCTACAATC...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR GCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGCTGAGCTATCCACGATaGTCTGAAGGTAGGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQLSYPR*SEGRIN Trigger: ATTGATCCTACCTTCAGAGCATCGTGGATAGCTCAG...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR GCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGCTGCCTTTAGTGAGATaGTCTGTGGGTTATCATACC | + |
|
Preference number: 4 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQLPLVR*SVGYHT Trigger: GGTATGATAACCCACAGAGCATCTCACTAAAGGCAG...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR GCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACAAGTTTGCATTCCACATaGCAATGCCCCGCAAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTSLHST*QCPASR Trigger: ACGGCTTGCGGGGCATTGGCATGTGGAATGCAAACT...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| 3UTR CAA 72 bp | GTCCAGGCATCCCTCAGTTATCCTCTCGCATTCCATTaGCATGCCTATCTTTATGTCATACGCTGTCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VQASLSYPLAFH*HAYLYVIRCLN Trigger: ATTTAGACAGCGTATGACATAAAGATAGGCATGCAAATGGAATGCGAGAGGATAACTGAGGGATGCCTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR GCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACACATTCCACATGCCAATaGCCCGCAAGCCGTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTHSTCQ*PASRSF Trigger: AAAACTACGGCTTGCGGGGCATTGGCATGTGGAATG...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGCTTTTAGCACTACCCTaGCTCCTTTTGAATGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQLLALP*LLLNEH Trigger: ATGCTCATTCAAAAGGAGCCAGGGTAGTGCTAAAAG...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGCACAGTTGTAATCTGTaGCCAGTCATAAGATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQHSCNL*PVIRFP Trigger: TGGAAATCTTATGACTGGTCACAGATTACAACTGTG...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCTCTCTGTGGTTTCTTTaGCCAGAGCTGTCAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PIWKGIICKEDRPYVMEFSLWFL*PELSVL Trigger: AAGCACTGACAGCTCTGGTCAAAGAAACCACAGAGA...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACATCTCTGTGGTTTCTTTaGCCAGAGCTGTCAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTSLWFL*PELSVL Trigger: AAGCACTGACAGCTCTGGTCAAAGAAACCACAGAGA...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACAGGCTGCAATACATTCTaGCCAGATCTGACTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTGCNTF*PDLTLL Trigger: GAGCAAAGTCAGATCTGGTCAGAATGTATTGCAGCC...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACAGATTGTAGGGAGCATTaGCGGCTGCAATACATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTDCREH*RLQYIL Trigger: CAGAATGTATTGCAGCCGCCAATGCTCCCTACAATC...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCCTTGTGTTTGCTCTCTaGCTAGAGCATCATCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PIWKGIICKEDRPYVMEFLVFAL*LEHHRS Trigger: ACTCCGATGATGCTCTAGCCAGAGAGCAAACACAAG...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACACTTGTGTTTGCTCTCTaGCTAGAGCATCATCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTLVFAL*LEHHRS Trigger: ACTCCGATGATGCTCTAGCCAGAGAGCAAACACAAG...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | AGCATAGCACATAAGTTCTGGGTCATATTTTCCAAAAGCTGCCACAGTTGTAATATACTGGTGGTTGCATaGACCTGGAAGAAGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIAHKFWVIFSKSCHSCNILVVA*TWKKYW Trigger: CCAGTACTTCTTCCAGGTCCATGCAACCACCAGTAT...ATTACAACTGTGGCAGCTTTTGGAAAATATGACCCAGAACTTATGTGCTATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCTACCCTGGCTCCTTTTaGATGAGCATAGCACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: PIWKGIICKEDRPYVMEFYPGSF*MSIAHK Trigger: CTTATGTGCTATGCTCATTCAAAAGGAGCCAGGGTA...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCGCTAAATCAACTTTCTaGGCTATCCACGATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIWKGIICKEDRPYVMEFAKSTF*AIHDAL Trigger: CAGAGCATCGTGGATAGCTCAGAAAGTTGATTTAGC...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACAGCTAAATCAACTTTCTaGGCTATCCACGATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTAKSTF*AIHDAL Trigger: CAGAGCATCGTGGATAGCTCAGAAAGTTGATTTAGC...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCGCAAGCCGTAGTTTTTaGCATATGCTGCCTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PIWKGIICKEDRPYVMEFASRSF*HMLPLV Trigger: CACTAAAGGCAGCATATGTCAAAAACTACGGCTTGC...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR TCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACACATTTACCTGCTTCATaGTCACCTTGTAGGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTHLPAS*SPCRAL Trigger: AAGTGCCCTACAAGGTGATCATGAAGCAGGTAAATG...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061937.13 |
||
| CDS-3UTR GCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACACTGAGCTATCCACGATaGTCTGAAGGTAGGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTLSYPR*SEGRIN Trigger: ATTGATCCTACCTTCAGAGCATCGTGGATAGCTCAG...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR GCA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCCTGCCTTTAGTGAGATaGTCTGTGGGTTATCATACC | + |
|
Preference number: 4 (lower is better) Translates to: PIWKGIICKEDRPYVMEFLPLVR*SVGYHT Trigger: GGTATGATAACCCACAGAGCATCTCACTAAAGGCAG...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR GCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACAGTAGTCAAGACAGTTTaGATTCCACATGCCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTVVKTV*IPHANA Trigger: GGCATTGGCATGTGGAATGCAAACTGTCTTGACTAC...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACATGGTCTTTATTCCACTaGCTTCCAGAAACAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTWSLFH*LPETEP Trigger: TGGCTCTGTTTCTGGAAGCCAGTGGAATAAAGACCA...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061937.13 |
||
| CDS-3UTR CCA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACACCATATACTGTGCTTTaGCTAAATCAACTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTPYTVL*LNQLSE Trigger: CTCAGAAAGTTGATTTAGCCAAAGCACAGTATATGG...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS CCA 90 bp | CTGGCTAGTGTTGAGGCCTCGAAGTCGGGACGGTGGCGGATCGGTTaGCAGAGAGCAGCCTCGGAGCACGGGCAGTCCCCGGCCGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LASVEASKSGRWRIG*QRAASEHGQSPAES Trigger: GCTCTCGGCCGGGGACTGCCCGTGCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGCCTCAACACTAGCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
||
| CDS CCA 90 bp | ACATCAAATACAAAGACCTCGAAGTCGGGACGGTGGCGGATCGGTTaGCAGAGAGCAGCCTCGGAGCACGGGCAGTCCCCGGCCGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSNTKTSKSGRWRIG*QRAASEHGQSPAES Trigger: GCTCTCGGCCGGGGACTGCCCGTGCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGTCTTTGTATTTGATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS CCA 90 bp | CTGGAAGAAGTACTGGCTAGTGTTGAGGCCTCGAAGTCGGGACGGTaGCGGATCGGTTGGCAGAGAGCAGCCTCGGAGCACGGGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LEEVLASVEASKSGR*RIGWQRAASEHGQS Trigger: GGACTGCCCGTGCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGCCTCAACACTAGCCAGTACTTCTTCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGCACCTTGTAGGGCACTaGATGGCCTGCAGCATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ADPGSKLSPGSPQVALVQHLVGH*MACSIA Trigger: AGCGATGCTGCAGGCCATCAAGTGCCCTACAAGGTG...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061937.13 |
||
| CDS-3UTR CAA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGAGTAGTCAAGACAGTTaGCATTCCACATGCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: ADPGSKLSPGSPQVALVQSSQDS*HSTCQC Trigger: GCATTGGCATGTGGAATGCAAACTGTCTTGACTACT...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CAA 90 bp | GCTGACCCTGGCAGCAAGCTCTCACCTGGATCTCCTCAGGTAGCTCTAGTCCAGTTTTGTCTATGCGCTTaGGTGACCAAGCTACATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ADPGSKLSPGSPQVALVQFCLCA*VTKLHQ Trigger: TTGATGTAGCTTGGTCACCAAAGCGCATAGACAAAA...CTGGACTAGAGCTACCTGAGGAGATCCAGGTGAGAGCTTGCTGCCAGGGTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS TCA 90 bp | CTTTATTCCACTGGCTTCCAGAAACAGAGCCATTTACCTGCTTCATaGTCACCTTGTAGGGCACTTGATGGCCTGCAGCATCGCTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYSTGFQKQSHLPAS*SPCRALDGLQHRYK Trigger: CTTGTAGCGATGCTGCAGGCCATCAAGTGCCCTACAAGGTGATCATGAAGCAGGTAAATGGCTCTGTTTCTGGAAGCCAGTGGAATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061937.13 |
||
| CDS TCA 90 bp | GACAGTTTGCATTCCACATGCCAATGCCCCGCAAGCCGTAGTTTTTaGCATATGCTGCCTTTAGTGAGATGCTCTGTGGGTTATCATACC | + |
|
Preference number: 5 (lower is better) Translates to: DSLHSTCQCPASRSF*HMLPLVRCSVGYHT Trigger: GGTATGATAACCCACAGAGCATCTCACTAAAGGCAGCATATGTCAAAAACTACGGCTTGCGGGGCATTGGCATGTGGAATGCAAACTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS GCA 90 bp | CACAGGCATCTGCGATCCCAGTGTAATTATAGCACCTTTTGTCTATaGGCTTTGGTGACCAAGCTACATCAAAGGTTACCTGTGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRHLRSQCNYSTFCL*ALVTKLHQRLPVIP Trigger: AGGGATCACAGGTAACCTTTGATGTAGCTTGGTCACCAAAGCGCATAGACAAAAGGTGCTATAATTACACTGGGATCGCAGATGCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS CCA 90 bp | ACAGCCTTGGTTTTAAGGCTCCCCACATTTCTTGTGTTTGCTCTCTaGCTAGAGCATCATCGGAGTAGTCAAGACAGTTTGCATTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TALVLRLPTFLVFAL*LEHHRSSQDSLHST Trigger: TGTGGAATGCAAACTGTCTTGACTACTCCGATGATGCTCTAGCCAGAGAGCAAACACAAGAAATGTGGGGAGCCTTAAAACCAAGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
||
| CDS-3UTR CAA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGCTCTCTGTGGTTTCTTaGACCAGAGCTGTCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQLSVVS*TRAVSA Trigger: AGCACTGACAGCTCTGGTCAAAGAAACCACAGAGAG...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS-3UTR CAA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGGGCCAGCAGGATCCTTaGAGAGATTTAGGCAAATGT | + |
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Preference number: 5 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQGQQDP*RDLGKC Trigger: ACATTTGCCTAAATCTCTCAAAGGATCCTGCTGGCC...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029840.4 |
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| CDS-3UTR CAA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGAGTAGTCAAGACAGTTaGCATTCCACATGCCAATGC | + |
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Preference number: 5 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQSSQDS*HSTCQC Trigger: GCATTGGCATGTGGAATGCAAACTGTCTTGACTACT...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS-3UTR CAA 90 bp | TATATGCATGGACGTATGTCCATGTACCATGTGTGTGCAGGAAGAGTGAATCAGTTTTGTCTATGCGCTTaGGTGACCAAGCTACATCAA | + |
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Preference number: 5 (lower is better) Translates to: YMHGRMSMYHVCAGRVNQFCLCA*VTKLHQ Trigger: TTGATGTAGCTTGGTCACCAAAGCGCATAGACAAAA...CTGATTCACTCTTCCTGCACACACATGGTACATGGACATACGTCCATGCATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS-3UTR CAA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACAGTTATCATACCACACTaGATGAAAACGGCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTVIIPH*MKTASR Trigger: CCTGCTGGCCGTTTTCATCAAGTGTGGTATGATAAC...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS-3UTR CAA 90 bp | CCAATTTGGAAGGGGATCATATGTAAAGAAGATAGGCCTTATGTAATGGAGTTCGTTATAATAGGGAGCTaGCTGGTCTTTATTCCACTG | + |
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Preference number: 5 (lower is better) Translates to: PIWKGIICKEDRPYVMEFVIIGS*LVFIPL Trigger: CAGTGGAATAAAGACCAGCAAGCTCCCTATTATAAC...GAACTCCATTACATAAGGCCTATCTTCTTTACATATGATCCCCTTCCAAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061937.13 |
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| CDS-3UTR CAA 90 bp | CATATGTACTGTAAGAAATCAGGAACCAGAAAAGCCATGCCTACTCATTCAACATGCAAATGTCATCCTTaGAGAGATTTAGGCAAATGT | + |
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Preference number: 5 (lower is better) Translates to: HMYCKKSGTRKAMPTHSTCKCHP*RDLGKC Trigger: ACATTTGCCTAAATCTCTCAAAGGATGACATTTGCA...TGTTGAATGAGTAGGCATGGCTTTTCTGGTTCCTGATTTCTTACAGTACATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061937.13 |
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| CDS GCA 72 bp | AGCCTCGGAGCACGGGCAGTCCCCGGCCGAGAGCCGTaGCAACAGCGGCAGCAGCAGCAGAGTGAATTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SLGARAVPGREP*QQRQQQQSEFR Trigger: CCGGAATTCACTCTGCTGCTGCTGCCGCTGTTGGCACGGCTCTCGGCCGGGGACTGCCCGTGCTCCGAGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 ENSMUST00000196609.2 |
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| CDS CCA 72 bp | GTTGAGGCCTCGAAGTCGGGACGGTGGCGGATCGGTTaGCAGAGAGCAGCCTCGGAGCACGGGCAGTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: VEASKSGRWRIG*QRAASEHGQSP Trigger: CGGGGACTGCCCGTGCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGCCTCAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
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| CDS CCA 72 bp | ACAAAGACCTCGAAGTCGGGACGGTGGCGGATCGGTTaGCAGAGAGCAGCCTCGGAGCACGGGCAGTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: TKTSKSGRWRIG*QRAASEHGQSP Trigger: CGGGGACTGCCCGTGCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGTCTTTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CAA 72 bp | TACAAAGACCTCGAAGTCGGGACGGTGGCGGATCGGTaGGCAGAGAGCAGCCTCGGAGCACGGGCAGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: YKDLEVGTVADR*AESSLGARAVP Trigger: GGGGACTGCCCGTGCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGTCTTTGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CCA 72 bp | GTACTGGCTAGTGTTGAGGCCTCGAAGTCGGGACGGTaGCGGATCGGTTGGCAGAGAGCAGCCTCGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VLASVEASKSGR*RIGWQRAASEH Trigger: GTGCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGCCTCAACACTAGCCAGTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196609.2 |
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| CDS CAA 90 bp | AACATCAAATACAAAGACCTCGAAGTCGGGACGGTGGCGGATCGGTaGGCAGAGAGCAGCCTCGGAGCACGGGCAGTCCCCGGCCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: NIKYKDLEVGTVADR*AESSLGARAVPGRE Trigger: CTCTCGGCCGGGGACTGCCCGTGCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGTCTTTGTATTTGATGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CCA 72 bp | CCAACATCAAATACAAAGACCTCGAAGTCGGGACGGTaGCGGATCGGTTGGCAGAGAGCAGCCTCGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: PTSNTKTSKSGR*RIGWQRAASEH Trigger: GTGCTCCGAGGCTGCTCTCTGCCAACCGATCCGCCACCGTCCCGACTTCGAGGTCTTTGTATTTGATGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CAA 72 bp | CTCTGGCTAGAGCATCATCGGAGTAGTCAAGACAGTTaGCATTCCACATGCCAATGCCCCGCAAGCCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LWLEHHRSSQDS*HSTCQCPASRS Trigger: ACTACGGCTTGCGGGGCATTGGCATGTGGAATGCAAACTGTCTTGACTACTCCGATGATGCTCTAGCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS TCA 72 bp | CATTCCACATGCCAATGCCCCGCAAGCCGTAGTTTTTaGCATATGCTGCCTTTAGTGAGATGCTCTGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: HSTCQCPASRSF*HMLPLVRCSVG Trigger: ACCCACAGAGCATCTCACTAAAGGCAGCATATGTCAAAAACTACGGCTTGCGGGGCATTGGCATGTGGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS TCA 72 bp | ACTGGCTTCCAGAAACAGAGCCATTTACCTGCTTCATaGTCACCTTGTAGGGCACTTGATGGCCTGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: TGFQKQSHLPAS*SPCRALDGLQH Trigger: ATGCTGCAGGCCATCAAGTGCCCTACAAGGTGATCATGAAGCAGGTAAATGGCTCTGTTTCTGGAAGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061937.13 |
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| CDS TCA 72 bp | CTGATTGTAGGGAGCATTGGCGGCTGCAATACATTCTaGCCAGATCTGACTTTGCTCATCGTAAGACATCAC | + |
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Preference number: 6 (lower is better) Translates to: LIVGSIGGCNTF*PDLTLLIVRHH Trigger: GTGATGTCTTACGATGAGCAAAGTCAGATCTGGTCAGAATGTATTGCAGCCGCCAATGCTCCCTACAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CCA 72 bp | ACATCAAAGGTTACCTGTGATCCCTCGATCTCACGTTaGAAACTCTCTGTGGTTTCTTTGACCAGAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: TSKVTCDPSISR*KLSVVSLTRAV Trigger: GACAGCTCTGGTCAAAGAAACCACAGAGAGTTTCCAACGTGAGATCGAGGGATCACAGGTAACCTTTGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CAA 90 bp | CATCTGCGATCCCAGTGTAATTATAGCACCTTTTGTCTATGCGCTTaGGTGACCAAGCTACATCAAAGGTTACCTGTGATCCCTCGATCT | + |
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Preference number: 6 (lower is better) Translates to: HLRSQCNYSTFCLCA*VTKLHQRLPVIPRS Trigger: AGATCGAGGGATCACAGGTAACCTTTGATGTAGCTTGGTCACCAAAGCGCATAGACAAAAGGTGCTATAATTACACTGGGATCGCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CCA 72 bp | GTTTTAAGGCTCCCCACATTTCTTGTGTTTGCTCTCTaGCTAGAGCATCATCGGAGTAGTCAAGACAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VLRLPTFLVFAL*LEHHRSSQDSL Trigger: CAAACTGTCTTGACTACTCCGATGATGCTCTAGCCAGAGAGCAAACACAAGAAATGTGGGGAGCCTTAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CAA 90 bp | GTGGGTTATCATACCACACTTGATGAAAACGGCCAGCAGGATCCTTaGAGAGATTTAGGCAAATGTAATCATAGCCATACCAGGGAACAC | + |
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Preference number: 6 (lower is better) Translates to: VGYHTTLDENGQQDP*RDLGKCNHSHTREH Trigger: GTGTTCCCTGGTATGGCTATGATTACATTTGCCTAAATCTCTCAAAGGATCCTGCTGGCCGTTTTCATCAAGTGTGGTATGATAACCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029840.4 |
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| CDS GCA 72 bp | CTGCGATCCCAGTGTAATTATAGCACCTTTTGTCTATaGGCTTTGGTGACCAAGCTACATCAAAGGTTACCT | + |
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Preference number: 6 (lower is better) Translates to: LRSQCNYSTFCL*ALVTKLHQRLP Trigger: AGGTAACCTTTGATGTAGCTTGGTCACCAAAGCGCATAGACAAAAGGTGCTATAATTACACTGGGATCGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CAA 72 bp | TCCCAGTGTAATTATAGCACCTTTTGTCTATGCGCTTaGGTGACCAAGCTACATCAAAGGTTACCTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: SQCNYSTFCLCA*VTKLHQRLPVI Trigger: GATCACAGGTAACCTTTGATGTAGCTTGGTCACCAAAGCGCATAGACAAAAGGTGCTATAATTACACTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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| CDS CCA 72 bp | CAATATATCCAGTTAATGTCTGATTGTAGGGAGCATTaGCGGCTGCAATACATTCTGACCAGATCTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: QYIQLMSDCREH*RLQYILTRSDF Trigger: AAAGTCAGATCTGGTCAGAATGTATTGCAGCCGCCAATGCTCCCTACAATCAGACATTAACTGGATATATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029840.4 ENSMUST00000061937.13 |
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