Pregenerated sensors for CTBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030970Ensembl transcript IDs: ENSMUST00000033269.15, ENSMUST00000163601.8, ENSMUST00000165457.2, ENSMUST00000166439.8, ENSMUST00000169570.8
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGGCTCCACGGGGGCTGCTCCAGGTTTCCGCAGGAGCTGGGGGCTaGCGTGCGGGCTGGGCAGCGGAGAGGCGGTCATGCTGCGTTCCC | + |
|
Preference number: 1 (lower is better) Translates to: TAPRGLLQVSAGAGG*RAGWAAERRSCCVP Trigger: GGGAACGCAGCATGACCGCCTCTCCGCTGCCCAGCCCGCACGGCAGCCCCCAGCTCCTGCGGAAACCTGGAGCAGCCCCCGTGGAGCCGT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR CCA 90 bp | AGGGTAGACGGCTCCACGGGGGCTGCTCCAGGTTTCCGCAGGAGCTaGGGGCTGCCGTGCGGGCTGGGCAGCGGAGAGGCGGTCATGCTG | + |
|
Preference number: 1 (lower is better) Translates to: RVDGSTGAAPGFRRS*GLPCGLGSGEAVML Trigger: CAGCATGACCGCCTCTCCGCTGCCCAGCCCGCACGGCAGCCCCCAGCTCCTGCGGAAACCTGGAGCAGCCCCCGTGGAGCCGTCTACCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR GCA 90 bp | GGCCCGTCCGGTCCTGTCTCCGAAACTGCATCTCTGTCCTGCAGCTaGTGGCTAGGCGGCTTAGGACTCGGGCCTGGCCCAGGTTGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: GPSGPVSETASLSCS*WLGGLGLGPGPGWV Trigger: CACCCAACCTGGGCCAGGCCCGAGTCCTAAGCCGCCTAGCCAGCAGCTGCAGGACAGAGATGCAGTTTCGGAGACAGGACCGGACGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR GCA 90 bp | GTAGAGGGCCCGTCCGGTCCTGTCTCCGAAACTGCATCTCTGTCCTaGAGCTGCTGGCTAGGCGGCTTAGGACTCGGGCCTGGCCCAGGT | + |
|
Preference number: 1 (lower is better) Translates to: VEGPSGPVSETASLS*SCWLGGLGLGPGPG Trigger: ACCTGGGCCAGGCCCGAGTCCTAAGCCGCCTAGCCAGCAGCTGCAGGACAGAGATGCAGTTTCGGAGACAGGACCGGACGGGCCCTCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR CCA 90 bp | CCGTCCGGTCCTGTCTCCGAAACTGCATCTCTGTCCTGCAGCTGCTaGCTAGGCGGCTTAGGACTCGGGCCTGGCCCAGGTTGGGTGCAA | + |
|
Preference number: 1 (lower is better) Translates to: PSGPVSETASLSCSC*LGGLGLGPGPGWVQ Trigger: TTGCACCCAACCTGGGCCAGGCCCGAGTCCTAAGCCGCCTAGCCAGCAGCTGCAGGACAGAGATGCAGTTTCGGAGACAGGACCGGACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 90 bp | ATGATGGGAGCCCCAGTCCGCCGGGCCACCTTCTGGTACGGTGAATaGGGTGTGTGGAGACTTTGGCTGACTGGTGGCAGGGTAGACGGC | + |
|
Preference number: 1 (lower is better) Translates to: MMGAPVRRATFWYGE*GVWRLWLTGGRVDG Trigger: GCCGTCTACCCTGCCACCAGTCAGCCAAAGTCTCCACACACCTCATTCACCGTACCAGAAGGTGGCCCGGCGGACTGGGGCTCCCATCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 90 bp | TACCCAGTGAGGCCATGTCATTGGGCAGCAGCTCACTTCGGTGGCTaGAGCTACTGGACCTATTGCGGGGTAGAGGGCCCGTCCGGTCCT | + |
|
Preference number: 1 (lower is better) Translates to: YPVRPCHWAAAHFGG*SYWTYCGVEGPSGP Trigger: AGGACCGGACGGGCCCTCTACCCCGCAATAGGTCCAGTAGCTTCAGCCACCGAAGTGAGCTGCTGCCCAATGACATGGCCTCACTGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 90 bp | CACGATGATGGGAGCCCCAGTCCGCCGGGCCACCTTCTGGTACGGTaGATGAGGTGTGTGGAGACTTTGGCTGACTGGTGGCAGGGTAGA | + |
|
Preference number: 1 (lower is better) Translates to: HDDGSPSPPGHLLVR*MRCVETLADWWQGR Trigger: TCTACCCTGCCACCAGTCAGCCAAAGTCTCCACACACCTCATTCACCGTACCAGAAGGTGGCCCGGCGGACTGGGGCTCCCATCATCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 90 bp | CTGCAAAGGTCCAGCAGGGTGAAACTGCAGGGCTGTGGTACCCAGTaGGGCCATGTCATTGGGCAGCAGCTCACTTCGGTGGCTGAAGCT | + |
|
Preference number: 1 (lower is better) Translates to: LQRSSRVKLQGCGTQ*GHVIGQQLTSVAEA Trigger: AGCTTCAGCCACCGAAGTGAGCTGCTGCCCAATGACATGGCCTCACTGGGTACCACAGCCCTGCAGTTTCACCCTGCTGGACCTTTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 90 bp | TCTGGGGGCGGATACTTGGTTCTGGAGTTAGCATGGTTGACACGATaGTGGGAGCCCCAGTCCGCCGGGCCACCTTCTGGTACGGTGAAT | + |
|
Preference number: 1 (lower is better) Translates to: SGGGYLVLELAWLTR*WEPQSAGPPSGTVN Trigger: ATTCACCGTACCAGAAGGTGGCCCGGCGGACTGGGGCTCCCATCATCGTGTCAACCATGCTAACTCCAGAACCAAGTATCCGCCCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGTAGACGGCTCCACGGGGGCTGCTCCAGGTTTCCGCAGGAGCTGGGGGCTAGAGGCACCAGCCCCTaGAGACCAAAGGGACTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: QGRRLHGGCSRFPQELGARGTSP*RPKGLV Trigger: GACTAGTCCCTTTGGTCTCCAGGGGCTGGTGCCTCT...AGCCCCCAGCTCCTGCGGAAACCTGGAGCAGCCCCCGTGGAGCCGTCTACCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR CAA 90 bp | TCATTGGGCAGCAGCTCACTTCGGTGGCTGAAGCTACTGGACCTATaGCGGGGTAGAGGGCCCGTCCGGTCCTGTCTCCGAAACTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: SLGSSSLRWLKLLDL*RGRGPVRSCLRNCI Trigger: GATGCAGTTTCGGAGACAGGACCGGACGGGCCCTCTACCCCGCAATAGGTCCAGTAGCTTCAGCCACCGAAGTGAGCTGCTGCCCAATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCGGAGAGGCGGTCATGCTGCGTTCCCTCTTAAGCAGTTCCATGGGCACCGTGGTGAGGCCATGTCATTaGGCAGCAGCTCACTTCGGT | + |
|
Preference number: 2 (lower is better) Translates to: SGEAVMLRSLLSSSMGTVVRPCH*AAAHFG Trigger: ACCGAAGTGAGCTGCTGCCCAATGACATGGCCTCAC...CACGGTGCCCATGGAACTGCTTAAGAGGGAACGCAGCATGACCGCCTCTCCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTTAAGCAGTTCCATGGGCACCGTGTACGAGGTGGAGTAGGCAGTTCTGGGGGGAGCAGAGGGGCCTaGGTTAGCAGTCAAGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: PLKQFHGHRVRGGVGSSGGSRGA*VSSQGY Trigger: GTAGCCTTGACTGCTAACCCAGGCCCCTCTGCTCCC...CCCAGAACTGCCTACTCCACCTCGTACACGGTGCCCATGGAACTGCTTAAGAGG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTTAGGGCACAGGGGGTAGGAGAGCTATATCCAGAGTTGGAGGGTAAGTGGACTGCATCTCTGTCCTaGAGCTGCTGGCTAGGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: AVRAQGVGELYPELEGKWTASLS*SCWLGG Trigger: GCCGCCTAGCCAGCAGCTGCAGGACAGAGATGCAGT...CCACTTACCCTCCAACTCTGGATATAGCTCTCCTACCCCCTGTGCCCTAACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR GCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGAGGTGCTGGGAAGGTaGACTGGAGGGGCGGCGACC | + |
|
Preference number: 2 (lower is better) Translates to: PSWLNFNLPISRGTSPWREVLGR*TGGAAT Trigger: GGTCGCCGCCCCTCCAGTGCACCTTCCCAGCACCTC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR TCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGGCTGTGGTACCCAGTaGGGCCATGTCATTGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PSWLNFNLPISRGTSPWRGCGTQ*GHVIGQ Trigger: CTGCCCAATGACATGGCCTCACTGGGTACCACAGCC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTTAAGCAGTTCCATGGGCACCGTGTACGAGGTGGAGTAGGCAGTTCTGGGGTCTTCCCACACCTCTaGAAGCAGATACCATCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: PLKQFHGHRVRGGVGSSGVFPHL*KQIPSS Trigger: TGAAGATGGTATCTGCTTCCAGAGGTGTGGGAAGAC...CCCAGAACTGCCTACTCCACCTCGTACACGGTGCCCATGGAACTGCTTAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTAGAGGCACCAGCCCCTaGAGACCAAAGGGACTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSRGTSP*RPKGLV Trigger: GACTAGTCCCTTTGGTCTCCAGGGGCTGGTGCCTCT...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCTGTCCTGCAGCTGCTaGCTAGGCGGCTTAGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: LLRCETFCIGAFTSSILCLSCSC*LGGLGL Trigger: GAGTCCTAAGCCGCCTAGCCAGCAGCTGCAGGACAG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTCTCTGTCCTGCAGCTaGTGGCTAGGCGGCTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLRCETFCIGAFTSSILCSLSCS*WLGGLG Trigger: TCCTAAGCCGCCTAGCCAGCAGCTGCAGGACAGAGA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTTAAGCAGTTCCATGGGCACCGTGTACGAGGTGGAGTAGGCAGTTCTGGGTTTTCTACTGTCTCTTaGTCCCAAGTTTATCGGATT | + |
|
Preference number: 2 (lower is better) Translates to: PLKQFHGHRVRGGVGSSGFSTVS*SQVYRI Trigger: AATCCGATAAACTTGGGACCAAGAGACAGTAGAAAA...CCCAGAACTGCCTACTCCACCTCGTACACGGTGCCCATGGAACTGCTTAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCAGAGGCACCAGCCCCTaGAGACCAAAGGGACTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LLRCETFCIGAFTSSILCRGTSP*RPKGLV Trigger: GACTAGTCCCTTTGGTCTCCAGGGGCTGGTGCCTCT...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGTCTTCCCACACCTCTaGAAGCAGATACCATCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: PSWLNFNLPISRGTSPWRVFPHL*KQIPSS Trigger: TGAAGATGGTATCTGCTTCCAGAGGTGTGGGAAGAC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR-3UTR TCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGATATTCGGAGCTCTTaGTGCAACATTCTAGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PSWLNFNLPISRGTSPWRDIRSS*CNILEQ Trigger: TTGCTCTAGAATGTTGCATCAAGAGCTCCGAATATC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR-3UTR CCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAGTCTTCCCACACCTCTaGAAGCAGATACCATCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: PTLLLRCETFCIGAFTSSVFPHL*KQIPSS Trigger: TGAAGATGGTATCTGCTTCCAGAGGTGTGGGAAGAC...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR-3UTR TCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAGATATTCGGAGCTCTTaGTGCAACATTCTAGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PTLLLRCETFCIGAFTSSDIRSS*CNILEQ Trigger: TTGCTCTAGAATGTTGCATCAAGAGCTCCGAATATC...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTTTTCTACTGTCTCTTaGTCCCAAGTTTATCGGATT | + |
|
Preference number: 2 (lower is better) Translates to: LLRCETFCIGAFTSSILCFSTVS*SQVYRI Trigger: AATCCGATAAACTTGGGACCAAGAGACAGTAGAAAA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR GCA 72 bp | GCTGACTGGTGGCAGGGTAGACGGCTCCACGGGGGCTaGTCCAGGTTTCCGCAGGAGCTGGGGGCTGCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: ADWWQGRRLHGG*SRFPQELGAAV Trigger: CACGGCAGCCCCCAGCTCCTGCGGAAACCTGGAGCAGCCCCCGTGGAGCCGTCTACCCTGCCACCAGTCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 72 bp | GCCCCAGTCCGCCGGGCCACCTTCTGGTACGGTGAATaGGGTGTGTGGAGACTTTGGCTGACTGGTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: APVRRATFWYGE*GVWRLWLTGGR Trigger: CCTGCCACCAGTCAGCCAAAGTCTCCACACACCTCATTCACCGTACCAGAAGGTGGCCCGGCGGACTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 72 bp | GGGAGCCCCAGTCCGCCGGGCCACCTTCTGGTACGGTaGATGAGGTGTGTGGAGACTTTGGCTGACTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSPSPPGHLLVR*MRCVETLADWW Trigger: CCACCAGTCAGCCAAAGTCTCCACACACCTCATTCACCGTACCAGAAGGTGGCCCGGCGGACTGGGGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR GCA 72 bp | GGTCCTGTCTCCGAAACTGCATCTCTGTCCTGCAGCTaGTGGCTAGGCGGCTTAGGACTCGGGCCTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GPVSETASLSCS*WLGGLGLGPGP Trigger: TGGGCCAGGCCCGAGTCCTAAGCCGCCTAGCCAGCAGCTGCAGGACAGAGATGCAGTTTCGGAGACAGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 72 bp | GCTCGGGGAGAGGGTGTCTGCAAAGGTCCAGCAGGGTaGAACTGCAGGGCTGTGGTACCCAGTGAGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: ARGEGVCKGPAG*NCRAVVPSEAM Trigger: CATGGCCTCACTGGGTACCACAGCCCTGCAGTTTCACCCTGCTGGACCTTTGCAGACACCCTCTCCCCGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 72 bp | AGGCCATGTCATTGGGCAGCAGCTCACTTCGGTGGCTaGAGCTACTGGACCTATTGCGGGGTAGAGGGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: RPCHWAAAHFGG*SYWTYCGVEGP Trigger: CGGGCCCTCTACCCCGCAATAGGTCCAGTAGCTTCAGCCACCGAAGTGAGCTGCTGCCCAATGACATGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR TCA 72 bp | GGATACTTGGTTCTGGAGTTAGCATGGTTGACACGATaGTGGGAGCCCCAGTCCGCCGGGCCACCTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GYLVLELAWLTR*WEPQSAGPPSG Trigger: ACCAGAAGGTGGCCCGGCGGACTGGGGCTCCCATCATCGTGTCAACCATGCTAACTCCAGAACCAAGTATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR GCA 72 bp | GGTTTGGGACCCCACCACTGGGGTGGAATAAGTAGCTaGTGTCTCCAAGAGGTGCTGGGAAGGTGCACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GLGPHHWGGISS*CLQEVLGRCTG Trigger: TCCAGTGCACCTTCCCAGCACCTCTTGGAGACAGCAGCTACTTATTCCACCCCAGTGGTGGGGTCCCAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR CCA 72 bp | TCTGCAAAGGTCCAGCAGGGTGAAACTGCAGGGCTGTaGTACCCAGTGAGGCCATGTCATTGGGCAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAKVQQGETAGL*YPVRPCHWAAA Trigger: AGCTGCTGCCCAATGACATGGCCTCACTGGGTACCACAGCCCTGCAGTTTCACCCTGCTGGACCTTTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTTAGGGCACAGGGGGTAGGAGAGCTATATCCAGAGTTGGAGGGTAAGTGGAGTGAGGCCATGTCATaGGGCAGCAGCTCACTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: AVRAQGVGELYPELEGKWSEAMS*GSSSLR Trigger: CCGAAGTGAGCTGCTGCCCAATGACATGGCCTCACT...CCACTTACCCTCCAACTCTGGATATAGCTCTCCTACCCCCTGTGCCCTAACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCATGGGCACCGTGTACGAGGTGGAGTAGGCAGTTCTGGGATTTGAGTGAACCAAAGGGACTAGTCTaGATGGGGATTTCCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VPWAPCTRWSRQFWDLSEPKGLV*MGISSQ Trigger: TTGAGAGGAAATCCCCATCAAGACTAGTCCCTTTGG...TTCACTCAAATCCCAGAACTGCCTACTCCACCTCGTACACGGTGCCCATGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGTTTTCTACTGTCTCTaGGTCCCAAGTTTATCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PSWLNFNLPISRGTSPWRVFYCL*VPSLSD Trigger: ATCCGATAAACTTGGGACCAAGAGACAGTAGAAAAC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCCAAAGGGACTAGTCTaGATGGGGATTTCCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LLRCETFCIGAFTSSILCPKGLV*MGISSQ Trigger: TTGAGAGGAAATCCCCATCAAGACTAGTCCCTTTGG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAGTTTTCTACTGTCTCTaGGTCCCAAGTTTATCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PTLLLRCETFCIGAFTSSVFYCL*VPSLSD Trigger: ATCCGATAAACTTGGGACCAAGAGACAGTAGAAAAC...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCGTTTTCTACTGTCTCTaGGTCCCAAGTTTATCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLRCETFCIGAFTSSILCVFYCL*VPSLSD Trigger: ATCCGATAAACTTGGGACCAAGAGACAGTAGAAAAC...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| 3UTR CCA 72 bp | AAAGACCATCAAATTCATCCGTTTTCTACTGTCTCTTaGTCCCAAGTTTATCGGATTAGCTTCAGGCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: KDHQIHPFSTVS*SQVYRISFRHS Trigger: AGAATGCCTGAAGCTAATCCGATAAACTTGGGACCAAGAGACAGTAGAAAACGGATGAATTTGATGGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033269.15 ENSMUST00000165457.2 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGTCCTGCAGCTGCTGGCTAGGCGGCTTAGGACTCGGGCCTGGCCCAGGTGGGCACCGGCCGGCTaGTTCCTGGGTCCCGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISVLQLLARRLRTRAWPRWAPAG*FLGPDR Trigger: TCTATCGGGACCCAGGAACCAGCCGGCCGGTGCCCA...CCTGGGCCAGGCCCGAGTCCTAAGCCGCCTAGCCAGCAGCTGCAGGACAGAGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGTAGACGGCTCCACGGGGGCTGCTCCAGGTTTCCGCAGGAGCTGGGGGCTCCCATGGCATTCTGCTaGCAAGCATTCCGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGRRLHGGCSRFPQELGAPMAFC*QAFRSW Trigger: CCAGCTACGGAATGCTTGGCAGCAGAATGCCATGGG...AGCCCCCAGCTCCTGCGGAAACCTGGAGCAGCCCCCGTGGAGCCGTCTACCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| 3UTR CAA 72 bp | AGCAGCTCACTTCGGTGGCTGAAGCTACTGGACCTATaGCGGGGTAGAGGGCCCGTCCGGTCCTGTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLRWLKLLDL*RGRGPVRSCLR Trigger: TCGGAGACAGGACCGGACGGGCCCTCTACCCCGCAATAGGTCCAGTAGCTTCAGCCACCGAAGTGAGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTTAGGGCACAGGGGGTAGGAGAGCTATATCCAGAGTTGGAGGGTAAGTGGCGGCCGGCTGGTTCCTaGGTCCCGATAGAAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVRAQGVGELYPELEGKWRPAGS*VPIEGR Trigger: CCTCCCTTCTATCGGGACCCAGGAACCAGCCGGCCG...CCACTTACCCTCCAACTCTGGATATAGCTCTCCTACCCCCTGTGCCCTAACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTTAAGCAGTTCCATGGGCACCGTGTACGAGGTGGAGTAGGCAGTTCTGGGCAAGCATTCCGTAGCTaGGCACCGGCCGGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLKQFHGHRVRGGVGSSGQAFRS*APAGWF Trigger: GAACCAGCCGGCCGGTGCCCAGCTACGGAATGCTTG...CCCAGAACTGCCTACTCCACCTCGTACACGGTGCCCATGGAACTGCTTAAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTTAAGCAGTTCCATGGGCACCGTGTACGAGGTGGAGTAGGCAGTTCTGGGGAGAACGGCCAATATTaGTGTGCCTGCTGGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: PLKQFHGHRVRGGVGSSGENGQY*CACWEP Trigger: CGGTTCCCAGCAGGCACATCAATATTGGCCGTTCTC...CCCAGAACTGCCTACTCCACCTCGTACACGGTGCCCATGGAACTGCTTAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTTAAGCAGTTCCATGGGCACCGTGTACGAGGTGGAGTAGGCAGTTCTGGGAGAACTTCTCCTCCCTaGAGGTCCAGCATTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLKQFHGHRVRGGVGSSGRTSPP*RSSILP Trigger: TGGGAGAATGCTGGACCTCCAGGGAGGAGAAGTTCT...CCCAGAACTGCCTACTCCACCTCGTACACGGTGCCCATGGAACTGCTTAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGACGGCCGGCTGGTTCCTaGGTCCCGATAGAAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRRPAGS*VPIEGR Trigger: CCTCCCTTCTATCGGGACCCAGGAACCAGCCGGCCG...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAGGTTTCCGCAGGAGCTaGGGGCTGCCGTGCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSGFRRS*GLPCGL Trigger: CAGCCCGCACGGCAGCCCCCAGCTCCTGCGGAAACC...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTTAGGGCACAGGGGGTAGGAGAGCTATATCCAGAGTTGGAGGGTAAGTGGGCAGCATCCCAGCTCTaGGAACGGCCAATATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AVRAQGVGELYPELEGKWAASQL*ERPILM Trigger: CATCAATATTGGCCGTTCTCAGAGCTGGGATGCTGC...CCACTTACCCTCCAACTCTGGATATAGCTCTCCTACCCCCTGTGCCCTAACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAGAGGTGCTGGGAAGGTaGACTGGAGGGGCGGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSEVLGR*TGGAAT Trigger: GGTCGCCGCCCCTCCAGTGCACCTTCCCAGCACCTC...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAGGCCCTGGGCGAAGCTaGAGGGCTCAGACTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSGPGRS*RAQTRA Trigger: TGCACGAGTCTGAGCCCTTCAGCTTCGCCCAGGGCC...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTGGCCCTGGGCGAAGCTaGAGGGCTCAGACTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSGPGRS*RAQTRA Trigger: TGCACGAGTCTGAGCCCTTCAGCTTCGCCCAGGGCC...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGACAGCATCCTCCAGGGTaGCCAAGACAGCTGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRQHPPG*PRQLGS Trigger: ACTCCCCAGCTGTCTTGGCCACCCTGGAGGATGCTG...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGATGCGACCAAAGCCAATaGGGCCCAGTGTTTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRCDQSQ*GPVFPL Trigger: GAGGGGAAACACTGGGCCTCATTGGCTTTGGTCGCA...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGATGCTGTCGTAGAAGGTaGAGTCAGGCACGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRCCRRR*SQARSP Trigger: AGGGCTCCGTGCCTGACTTCACCTTCTACGACAGCA...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGACGAACAGCAACTGCCTaGCCTGTGCGACCAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRRTATA*PVRPKP Trigger: TGGCTTTGGTCGCACAGGGCAGGCAGTTGCTGTTCG...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGATCTCTGTCCTGCAGCTaGTGGCTAGGCGGCTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRSLSCS*WLGGLG Trigger: TCCTAAGCCGCCTAGCCAGCAGCTGCAGGACAGAGA...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGATCCTTCAATGGGCCCTaGGCGAAGCTGAAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRSFNGP*AKLKGS Trigger: TGAGCCCTTCAGCTTCGCCCAGGGCCCATTGAAGGA...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGATGGAGGAAGCCCTCCTaGAGCCACACCTACAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRWRKPS*SHTYNA Trigger: GGCATTGTAGGTGTGGCTCCAGGAGGGCTTCCTCCA...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGTACCCTGGTGCCCCTaGATGGGTCGCCATAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRVPWCP*MGRHSS Trigger: ACTACTATGGCGACCCATCCAGGGGCACCAGGGTAC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTGGGCACCGGCCGGCTaGTTCCTGGGTCCCGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCWAPAG*FLGPDR Trigger: TCTATCGGGACCCAGGAACCAGCCGGCCGGTGCCCA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAGGCTGTGGTACCCAGTaGGGCCATGTCATTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSGCGTQ*GHVIGQ Trigger: CTGCCCAATGACATGGCCTCACTGGGTACCACAGCC...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGCAGACTGTCGAATCTaGTGTCTCCTCCACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRADCRI*CLLHCS Trigger: GCTGCAGTGGAGGAGACAGCAGATTCGACAGTCTGC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGGTACATGGTCCTCTTaGCCCCAGGTCCTTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRGTWSS*PQVLGM Trigger: CATTCCAAGGACCTGGGGGCAAGAGGACCATGTACC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAACTGCATCTCTGTCCTaGAGCTGCTGGCTAGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSTASLS*SCWLGG Trigger: GCCGCCTAGCCAGCAGCTGCAGGACAGAGATGCAGT...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCAAGCATTCCGTAGCTaGGCACCGGCCGGCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCQAFRS*APAGWF Trigger: GAACCAGCCGGCCGGTGCCCAGCTACGGAATGCTTG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCACAGGGCTGCTAGGGTaGCCTCTGCCACACCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCTGLLG*PLPHPL Trigger: CAGAGGGTGTGGCAGAGGCCACCCTAGCAGCCCTGT...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGCACCGTGTACGAGGTaGAGTAGGCAGTTCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRAPCTR*SRQFWD Trigger: ATCCCAGAACTGCCTACTCCACCTCGTACACGGTGC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTTGCTGTCGTAGAAGGTaGAGTCAGGCACGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSCCRRR*SQARSP Trigger: AGGGCTCCGTGCCTGACTTCACCTTCTACGACAGCA...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTGGCAGTTCTGGGATTTaGGTGAAGGGGAGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSGSSGI*VKGSRG Trigger: CCCTCTGCTCCCCTTCACTCAAATCCCAGAACTGCC...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCACGAACAGCAACTGCCTaGCCTGTGCGACCAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSRTATA*PVRPKP Trigger: TGGCTTTGGTCGCACAGGGCAGGCAGTTGCTGTTCG...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAAAGGGCTCAGACTCGTaGACATCCAGGGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSKGSDS*TSRAAP Trigger: AGGAGCTGCCCTGGATGTGCACGAGTCTGAGCCCTT...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTTCCTTCAATGGGCCCTaGGCGAAGCTGAAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSSFNGP*AKLKGS Trigger: TGAGCCCTTCAGCTTCGCCCAGGGCCCATTGAAGGA...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCATGGAGGAAGCCCTCCTaGAGCCACACCTACAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSWRKPS*SHTYNA Trigger: GGCATTGTAGGTGTGGCTCCAGGAGGGCTTCCTCCA...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAAGAACTTCTCCTCCCTaGAGGTCCAGCATTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRRTSPP*RSSILP Trigger: TGGGAGAATGCTGGACCTCCAGGGAGGAGAAGTTCT...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGATGCAGAGCAGGTAACTaGCCTTGTACCTGCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRCRAGN*PCTCSH Trigger: ATGGGAGCAGGTACAAGGCCAGTTACCTGCTCTGCA...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCATTGGGGCCACCTGTCTaGCAGGGGTTGAGTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSLGPPV*QGLSQQ Trigger: CTGTTGACTCAACCCCTGCCAGACAGGTGGCCCCAA...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCACAACCAGGCATGTTaGGGCCACCTGTCTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCHNQAC*GHLSGR Trigger: CCTGCCAGACAGGTGGCCCCAACATGCCTGGTTGTG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCTTAGGACTCGGGCCTaGCCCAGGTTGGGTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCLRTRA*PRLGAT Trigger: TGTTGCACCCAACCTGGGCCAGGCCCGAGTCCTAAG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCGGGAGCAGAGGGGCCTaGGTTAGCAGTCAAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCGSRGA*VSSQGY Trigger: GTAGCCTTGACTGCTAACCCAGGCCCCTCTGCTCCC...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTGCGACCAAAGCCAATaGGGCCCAGTGTTTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCCDQSQ*GPVFPL Trigger: GAGGGGAAACACTGGGCCTCATTGGCTTTGGTCGCA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTGAGAACGGCCAATATTaGTGTGCCTGCTGGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSENGQY*CACWEP Trigger: CGGTTCCCAGCAGGCACATCAATATTGGCCGTTCTC...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTCTGTCTGGCAGGGGTTaGGTCAACAGGTCTTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSLSGRG*VNRSFA Trigger: TGCGAAAGACCTGTTGACTCAACCCCTGCCAGACAG...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCACAGCAGATGGGATGTTaGACACAGCGATCCCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSQQMGC*TQRSRA Trigger: AGCTCGGGATCGCTGTGTGCAACATCCCATCTGCTG...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAGCAGACTGTCGAATCTaGTGTCTCCTCCACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSADCRI*CLLHCS Trigger: GCTGCAGTGGAGGAGACAGCAGATTCGACAGTCTGC...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCGAACAGCAACTGCCTaGCCTGTGCGACCAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCRTATA*PVRPKP Trigger: TGGCTTTGGTCGCACAGGGCAGGCAGTTGCTGTTCG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCAAGGGCTCAGACTCGTaGACATCCAGGGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCKGSDS*TSRAAP Trigger: AGGAGCTGCCCTGGATGTGCACGAGTCTGAGCCCTT...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAACGGCCAGACATCACTaGCTGCCTGCTGTCGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSTARHH*LPAVVE Trigger: TTCTACGACAGCAGGCAGGCAGTGATGTCTGGCCGT...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCTCTGCCACACCCTCTaGCCTCAGCAGGGCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCLCHTL*PQQGQK Trigger: TTTTTGGCCCTGCTGAGGGCAGAGGGTGTGGCAGAG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTCTGGCCCAGGTTGGGTaGAACAGACTTGATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSLAQVG*NRLDVS Trigger: GCTGACATCAAGTCTGTTGCACCCAACCTGGGCCAG...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTGGAGGAAGCCCTCCTaGAGCCACACCTACAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCWRKPS*SHTYNA Trigger: GGCATTGTAGGTGTGGCTCCAGGAGGGCTTCCTCCA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCGTACCCTGGTGCCCCTaGATGGGTCGCCATAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCVPWCP*MGRHSS Trigger: ACTACTATGGCGACCCATCCAGGGGCACCAGGGTAC...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCGGTGGCCAAGACAGCTaGGGAGTCAAAGCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCGGQDS*GVKALL Trigger: CAGCAAGGCTTTGACTCCCCAGCTGTCTTGGCCACC...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTGTGAGGCCATGTCATTaGGCAGCAGCTCACTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSVRPCH*AAAHFG Trigger: ACCGAAGTGAGCTGCTGCCCAATGACATGGCCTCAC...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAGGTGTGTGGAGACTTTaGCTGACTGGTGGCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSGVWRL*LTGGRV Trigger: TACCCTGCCACCAGTCAGCCAAAGTCTCCACACACC...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTGCAGCATCCCAGCTCTaGGAACGGCCAATATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSAASQL*ERPILM Trigger: CATCAATATTGGCCGTTCTCAGAGCTGGGATGCTGC...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCAGCAGATGGGATGTTaGACACAGCGATCCCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCQQMGC*TQRSRA Trigger: AGCTCGGGATCGCTGTGTGCAACATCCCATCTGCTG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTTGCTGTCTCCTCCACTaGAGCAGATGGGATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSCCLLH*SRWDVA Trigger: TGCAACATCCCATCTGCTGCAGTGGAGGAGACAGCA...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCATGCTGTCTCCTCCACTaGAGCAGATGGGATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSCCLLH*SRWDVA Trigger: TGCAACATCCCATCTGCTGCAGTGGAGGAGACAGCA...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCACGGCCAGACATCACTaGCTGCCTGCTGTCGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCTARHH*LPAVVE Trigger: TTCTACGACAGCAGGCAGGCAGTGATGTCTGGCCGT...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCCCATGGCATTCTGCTaGCAAGCATTCCGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCPMAFC*QAFRSW Trigger: CCAGCTACGGAATGCTTGGCAGCAGAATGCCATGGG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTTGCAGAGCAGGTAACTaGCCTTGTACCTGCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSCRAGN*PCTCSH Trigger: ATGGGAGCAGGTACAAGGCCAGTTACCTGCTCTGCA...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAAAAACTCAGGGTACATaGTCCTCTTGCCCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSKTQGT*SSCPQV Trigger: GACCTGGGGGCAAGAGGACCATGTACCCTGAGTTTT...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCACCTTCTGGTACGGTaGATGAGGTGTGTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCHLLVR*MRCVET Trigger: AGTCTCCACACACCTCATTCACCGTACCAGAAGGTG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTGCTGTCTCCTCCACTaGAGCAGATGGGATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCCCLLH*SRWDVA Trigger: TGCAACATCCCATCTGCTGCAGTGGAGGAGACAGCA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTTTGTACCTGCTCCCATaGCATTCTGCTGCCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSLYLLP*HSAAKH Trigger: ATGCTTGGCAGCAGAATGCCATGGGAGCAGGTACAA...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCATTGTACCTGCTCCCATaGCATTCTGCTGCCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSLYLLP*HSAAKH Trigger: ATGCTTGGCAGCAGAATGCCATGGGAGCAGGTACAA...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTTCTGGTACGGTGAATaGGGTGTGTGGAGACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCFWYGE*GVWRLW Trigger: CCAAAGTCTCCACACACCTCATTCACCGTACCAGAA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGATACAGATTGAGAATGTaGCAGACTGTCGAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSWLNFNLPISRGTSPWRYRLRM*QTVESA Trigger: AGCAGATTCGACAGTCTGCCACATTCTCAATCTGTA...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTTGCCCCCAGGTCCTTaGAATGTAGACAAGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCLPPGP*NVDKSA Trigger: AGCTGACTTGTCTACATTCCAAGGACCTGGGGGCAA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTGTGTGGTGTGCAGATaGGATTTGGAGCATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCCVVCR*DLEHPS Trigger: TGAAGGATGCTCCAAATCTCATCTGCACACCACACA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTTACAGATTGAGAATGTaGCAGACTGTCGAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSYRLRM*QTVESA Trigger: AGCAGATTCGACAGTCTGCCACATTCTCAATCTGTA...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTACAGATTGAGAATGTaGCAGACTGTCGAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCYRLRM*QTVESA Trigger: AGCAGATTCGACAGTCTGCCACATTCTCAATCTGTA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CCGACTCTGCTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCACGAAGAATTCTTTGTTaGCACAGTTTCGTAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTLLLRCETFCIGAFTSSRRILC*HSFVSF Trigger: AAAGCTTACGAAACTGTGTCAACAAAGAATTCTTCG...TGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAGCAGAGTCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTCGAAGAATTCTTTGTTaGCACAGTTTCGTAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSRRILC*HSFVSF Trigger: AAAGCTTACGAAACTGTGTCAACAAAGAATTCTTCG...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCGAAGAATTCTTTGTTaGCACAGTTTCGTAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCETFCIGAFTSSILCRRILC*HSFVSF Trigger: AAAGCTTACGAAACTGTGTCAACAAAGAATTCTTCG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | TCTGCTGCCAAGCATTCCGTAGCTGGGCACCGGCCGGCTGGTTCCTaGGTCCCGATAGAAGGGAGGCTCCTTGGGTACCCTGGTGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SAAKHSVAGHRPAGS*VPIEGRLLGYPGAP Trigger: AGGGGCACCAGGGTACCCAAGGAGCCTCCCTTCTATCGGGACCCAGGAACCAGCCGGCCGGTGCCCAGCTACGGAATGCTTGGCAGCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | CTGGGTCCCGATAGAAGGGAGGCTCCTTGGGTACCCTGGTGCCCCTaGATGGGTCGCCATAGTAGTCTTGTGGCAGCACGGAGCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPDRREAPWVPWCP*MGRHSSLVAARSHG Trigger: GCCGTGGCTCCGTGCTGCCACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAGGAGCCTCCCTTCTATCGGGACCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | GCACCGGCCGGCTGGTTCCTGGGTCCCGATAGAAGGGAGGCTCCTTaGGTACCCTGGTGCCCCTGGATGGGTCGCCATAGTAGTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: APAGWFLGPDRREAP*VPWCPWMGRHSSLV Trigger: CACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAGGAGCCTCCCTTCTATCGGGACCCAGGAACCAGCCGGCCGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | CTTGGGTACCCTGGTGCCCCTGGATGGGTCGCCATAGTAGTCTTGTaGCAGCACGGAGCCACGGCCAGACATCACTGCCTGCCTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGYPGAPGWVAIVVL*QHGATARHHCLPAV Trigger: GACAGCAGGCAGGCAGTGATGTCTGGCCGTGGCTCCGTGCTGCCACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | GGCTGGTTCCTGGGTCCCGATAGAAGGGAGGCTCCTTGGGTACCCTaGTGCCCCTGGATGGGTCGCCATAGTAGTCTTGTGGCAGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: GWFLGPDRREAPWVP*CPWMGRHSSLVAAR Trigger: CCGTGCTGCCACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAGGAGCCTCCCTTCTATCGGGACCCAGGAACCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | ATGGCATTCTGCTGCCAAGCATTCCGTAGCTGGGCACCGGCCGGCTaGTTCCTGGGTCCCGATAGAAGGGAGGCTCCTTGGGTACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MAFCCQAFRSWAPAG*FLGPDRREAPWVPW Trigger: CCAGGGTACCCAAGGAGCCTCCCTTCTATCGGGACCCAGGAACCAGCCGGCCGGTGCCCAGCTACGGAATGCTTGGCAGCAGAATGCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | TGGCCAAGACAGCTCCCAGGAGATGGAGCCCTGCCGTGTGTCCGCTaGCCATGCGGGACAGTTTTACCCCCAGATTCCGGGTACAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WPRQLPGDGALPCVR*PCGTVLPPDSGYRW Trigger: CCACCTGTACCCGGAATCTGGGGGTAAAACTGTCCCGCATGGCCAGCGGACACACGGCAGGGCTCCATCTCCTGGGAGCTGTCTTGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS GCA 90 bp | TGGTTCCTGGGTCCCGATAGAAGGGAGGCTCCTTGGGTACCCTGGTaGCCCTGGATGGGTCGCCATAGTAGTCTTGTGGCAGCACGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WFLGPDRREAPWVPW*PWMGRHSSLVAARS Trigger: GCTCCGTGCTGCCACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAGGAGCCTCCCTTCTATCGGGACCCAGGAACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS GCA 90 bp | CCTGCAGAGCAGGTAACTGGCCTTGTACCTGCTCCCATGGCATTCTaGTGCCAAGCATTCCGTAGCTGGGCACCGGCCGGCTGGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAEQVTGLVPAPMAF*CQAFRSWAPAGWFL Trigger: CAGGAACCAGCCGGCCGGTGCCCAGCTACGGAATGCTTGGCAGCAGAATGCCATGGGAGCAGGTACAAGGCCAGTTACCTGCTCTGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS GCA 90 bp | AGCATCCTCCAGGGTGGCCAAGACAGCTCCCAGGAGATGGAGCCCTaGCGTGTGTCCGCTGGCCATGCGGGACAGTTTTACCCCCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: SILQGGQDSSQEMEP*RVSAGHAGQFYPQI Trigger: AATCTGGGGGTAAAACTGTCCCGCATGGCCAGCGGACACACGGCAGGGCTCCATCTCCTGGGAGCTGTCTTGGCCACCCTGGAGGATGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS CCA 90 bp | CTTGTACCTGCTCCCATGGCATTCTGCTGCCAAGCATTCCGTAGCTaGGCACCGGCCGGCTGGTTCCTGGGTCCCGATAGAAGGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVPAPMAFCCQAFRS*APAGWFLGPDRREA Trigger: AGCCTCCCTTCTATCGGGACCCAGGAACCAGCCGGCCGGTGCCCAGCTACGGAATGCTTGGCAGCAGAATGCCATGGGAGCAGGTACAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | ATCTCTGTCCTGCAGCTGCTGGCTAGGCGGCTTAGGACTCGGGCCTaGCCCAGGTTGGGTGCAACAGACTTGATGTCAGCATCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISVLQLLARRLRTRA*PRLGATDLMSASSR Trigger: CCTGGAGGATGCTGACATCAAGTCTGTTGCACCCAACCTGGGCCAGGCCCGAGTCCTAAGCCGCCTAGCCAGCAGCTGCAGGACAGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS GCA 90 bp | GCCATAGTAGTCTTGTGGCAGCACGGAGCCACGGCCAGACATCACTaGCTGCCTGCTGTCGTAGAAGGTGAAGTCAGGCACGGAGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AIVVLWQHGATARHH*LPAVVEGEVRHGAL Trigger: AAGGGCTCCGTGCCTGACTTCACCTTCTACGACAGCAGGCAGGCAGTGATGTCTGGCCGTGGCTCCGTGCTGCCACAAGACTACTATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | AGACAGCTGGGGAGTCAAAGCCTTGCTGTAACAGGGCTGCTAGGGTaGCCTCTGCCACACCCTCTGCCCTCAGCAGGGCCAAAAACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQLGSQSLAVTGLLG*PLPHPLPSAGPKTQ Trigger: CTGAGTTTTTGGCCCTGCTGAGGGCAGAGGGTGTGGCAGAGGCCACCCTAGCAGCCCTGTTACAGCAAGGCTTTGACTCCCCAGCTGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS CCA 90 bp | CCAGATTCCGGGTACAGGTGGCCAGTGTCCTGCAGAGCAGGTAACTaGCCTTGTACCTGCTCCCATGGCATTCTGCTGCCAAGCATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PDSGYRWPVSCRAGN*PCTCSHGILLPSIP Trigger: CGGAATGCTTGGCAGCAGAATGCCATGGGAGCAGGTACAAGGCCAGTTACCTGCTCTGCAGGACACTGGCCACCTGTACCCGGAATCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS TCA 90 bp | CGGAGCCACGGCCAGACATCACTGCCTGCCTGCTGTCGTAGAAGGTaGAGTCAGGCACGGAGCCCTTTCTTGATGCCAGTGAGTTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSHGQTSLPACCRRR*SQARSPFLMPVSYK Trigger: TTTATAACTCACTGGCATCAAGAAAGGGCTCCGTGCCTGACTTCACCTTCTACGACAGCAGGCAGGCAGTGATGTCTGGCCGTGGCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAGTCGCCATAGTAGTCTaGTGGCAGCACGGAGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PSWLNFNLPISRGTSPWRVAIVV*WQHGAT Trigger: CGTGGCTCCGTGCTGCCACAAGACTACTATGGCGAC...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAAGTGAGGCCATGTCATaGGGCAGCAGCTCACTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSWLNFNLPISRGTSPWRSEAMS*GSSSLR Trigger: CCGAAGTGAGCTGCTGCCCAATGACATGGCCTCACT...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCCCACAACCAGGCATGTaGGGGCCACCTGTCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRCETFCIGAFTSSILCPQPGM*GPPVWQ Trigger: CTGCCAGACAGGTGGCCCCAACATGCCTGGTTGTGG...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCGTCGCCATAGTAGTCTaGTGGCAGCACGGAGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LLRCETFCIGAFTSSILCVAIVV*WQHGAT Trigger: CGTGGCTCCGTGCTGCCACAAGACTACTATGGCGAC...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTCCTGTCTGGCAGGGGTaGAGTCAACAGGTCTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSPVWQG*SQQVFR Trigger: GCGAAAGACCTGTTGACTCAACCCCTGCCAGACAGG...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTGGGTACATGGTCCTCTaGCCCCCAGGTCCTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSGYMVL*PPGPWN Trigger: ATTCCAAGGACCTGGGGGCAAGAGGACCATGTACCC...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTAGGTGTGTGGAGACTTaGGCTGACTGGTGGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSRCVET*ADWWQG Trigger: ACCCTGCCACCAGTCAGCCAAAGTCTCCACACACCT...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTTTGGGTGCAACAGACTaGATGTCAGCATCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSLGATD*MSASSR Trigger: CCTGGAGGATGCTGACATCAAGTCTGTTGCACCCAA...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS TCA 90 bp | TTGGAATGTAGACAAGTCAGCTTCGTAATTCTCATAAGCCAGCTTTaGATGGATGCTTTCTCGGGTAGGCCCATAGCCTCTATTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LECRQVSFVILISQL*MDAFSGRPIASIQG Trigger: TCCCTGAATAGAGGCTATGGGCCTACCCGAGAAAGCATCCATTCAAAGCTGGCTTATGAGAATTACGAAGCTGACTTGTCTACATTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCTCTCATAAGCCAGCTTaGAATGGATGCTTTCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLRCETFCIGAFTSSILCSHKPA*NGCFLG Trigger: CCCGAGAAAGCATCCATTCAAAGCTGGCTTATGAGA...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | CCATCTTGGCTTAATTTTAATCTTCCTATCAGCAGAGGCACCAGCCCCTGGAGAACGAAGAATTCTTTGTaGACACAGTTTCGTAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSWLNFNLPISRGTSPWRTKNSL*TQFRKL Trigger: AAGCTTACGAAACTGTGTCAACAAAGAATTCTTCGT...TCTCCAGGGGCTGGTGCCTCTGCTGATAGGAAGATTAAAATTAAGCCAAGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | TTGTATCAGAGGGTTTTACTGAACCGACTCTGCTGCTCAGATGTGAAACCTTCTACGAAGAATTCTTTGTaGACACAGTTTCGTAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LYQRVLLNRLCCSDVKPSTKNSL*TQFRKL Trigger: AAGCTTACGAAACTGTGTCAACAAAGAATTCTTCGT...AGAAGGTTTCACATCTGAGCAGCAGAGTCGGTTCAGTAAAACCCTCTGATACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTCAGATGTGAAACCTTCTGTATAGGAGCTTTTACTTCTTCAATCCTGTGCACGAAGAATTCTTTGTaGACACAGTTTCGTAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRCETFCIGAFTSSILCTKNSL*TQFRKL Trigger: AAGCTTACGAAACTGTGTCAACAAAGAATTCTTCGT...GCACAGGATTGAAGAAGTAAAAGCTCCTATACAGAAGGTTTCACATCTGAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033269.15 ENSMUST00000166439.8 ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | TGCTGCCAAGCATTCCGTAGCTGGGCACCGGCCGGCTaGTTCCTGGGTCCCGATAGAAGGGAGGCTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CCQAFRSWAPAG*FLGPDRREAPW Trigger: CCAAGGAGCCTCCCTTCTATCGGGACCCAGGAACCAGCCGGCCGGTGCCCAGCTACGGAATGCTTGGCAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | CAGCTCCCAGGAGATGGAGCCCTGCCGTGTGTCCGCTaGCCATGCGGGACAGTTTTACCCCCAGATTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QLPGDGALPCVR*PCGTVLPPDSG Trigger: CCCGGAATCTGGGGGTAAAACTGTCCCGCATGGCCAGCGGACACACGGCAGGGCTCCATCTCCTGGGAGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS GCA 72 bp | CAGGGTGGCCAAGACAGCTCCCAGGAGATGGAGCCCTaGCGTGTGTCCGCTGGCCATGCGGGACAGTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: QGGQDSSQEMEP*RVSAGHAGQFY Trigger: GTAAAACTGTCCCGCATGGCCAGCGGACACACGGCAGGGCTCCATCTCCTGGGAGCTGTCTTGGCCACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165457.2 |
||
| CDS CCA 72 bp | CCTGGTGCCCCTGGATGGGTCGCCATAGTAGTCTTGTaGCAGCACGGAGCCACGGCCAGACATCACTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGAPGWVAIVVL*QHGATARHHCL Trigger: CAGGCAGTGATGTCTGGCCGTGGCTCCGTGCTGCCACAAGACTACTATGGCGACCCATCCAGGGGCACCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | GGCTGGTTCCTGGGTCCCGATAGAAGGGAGGCTCCTTaGGTACCCTGGTGCCCCTGGATGGGTCGCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: GWFLGPDRREAP*VPWCPWMGRHS Trigger: ACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAGGAGCCTCCCTTCTATCGGGACCCAGGAACCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | AAGCATTCCGTAGCTGGGCACCGGCCGGCTGGTTCCTaGGTCCCGATAGAAGGGAGGCTCCTTGGGTACCCT | + |
|
Preference number: 6 (lower is better) Translates to: KHSVAGHRPAGS*VPIEGRLLGYP Trigger: AGGGTACCCAAGGAGCCTCCCTTCTATCGGGACCCAGGAACCAGCCGGCCGGTGCCCAGCTACGGAATGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | GCTCCCATGGCATTCTGCTGCCAAGCATTCCGTAGCTaGGCACCGGCCGGCTGGTTCCTGGGTCCCGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: APMAFCCQAFRS*APAGWFLGPDR Trigger: TCTATCGGGACCCAGGAACCAGCCGGCCGGTGCCCAGCTACGGAATGCTTGGCAGCAGAATGCCATGGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | GGTATCAGGCTGTTCCCTTCCATACCTCCCAGGAGATaGAGCCCTGCCGTGTGTCCGCTGGCCATGCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GIRLFPSIPPRR*SPAVCPLAMRD Trigger: GTCCCGCATGGCCAGCGGACACACGGCAGGGCTCCATCTCCTGGGAGGTATGGAAGGGAACAGCCTGATACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS CAA 90 bp | CTCCTTGGGTACCCTGGTGCCCCTGGATGGGTCGCCATAGTAGTCTaGTGGCAGCACGGAGCCACGGCCAGACATCACTGCCTGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLGYPGAPGWVAIVV*WQHGATARHHCLPA Trigger: AGCAGGCAGGCAGTGATGTCTGGCCGTGGCTCCGTGCTGCCACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CAA 90 bp | CTGCAGCTGCTGGCTAGGCGGCTTAGGACTCGGGCCTGGCCCAGGTaGGGTGCAACAGACTTGATGTCAGCATCCTCCAGGGTGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LQLLARRLRTRAWPR*GATDLMSASSRVAK Trigger: CTTGGCCACCCTGGAGGATGCTGACATCAAGTCTGTTGCACCCAACCTGGGCCAGGCCCGAGTCCTAAGCCGCCTAGCCAGCAGCTGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS GCA 72 bp | CAGGTAACTGGCCTTGTACCTGCTCCCATGGCATTCTaGTGCCAAGCATTCCGTAGCTGGGCACCGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QVTGLVPAPMAF*CQAFRSWAPAG Trigger: GCCGGCCGGTGCCCAGCTACGGAATGCTTGGCAGCAGAATGCCATGGGAGCAGGTACAAGGCCAGTTACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | CTGCAGCTGCTGGCTAGGCGGCTTAGGACTCGGGCCTaGCCCAGGTTGGGTGCAACAGACTTGATGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQLLARRLRTRA*PRLGATDLMSA Trigger: TGCTGACATCAAGTCTGTTGCACCCAACCTGGGCCAGGCCCGAGTCCTAAGCCGCCTAGCCAGCAGCTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS CAA 72 bp | TACCCTGGTGCCCCTGGATGGGTCGCCATAGTAGTCTaGTGGCAGCACGGAGCCACGGCCAGACATCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: YPGAPGWVAIVV*WQHGATARHHC Trigger: GCAGTGATGTCTGGCCGTGGCTCCGTGCTGCCACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS GCA 72 bp | GTCTTGTGGCAGCACGGAGCCACGGCCAGACATCACTaGCTGCCTGCTGTCGTAGAAGGTGAAGTCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VLWQHGATARHH*LPAVVEGEVRH Trigger: GTGCCTGACTTCACCTTCTACGACAGCAGGCAGGCAGTGATGTCTGGCCGTGGCTCCGTGCTGCCACAAGAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS GCA 72 bp | GGTCCCGATAGAAGGGAGGCTCCTTGGGTACCCTGGTaGCCCTGGATGGGTCGCCATAGTAGTCTTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GPDRREAPWVPW*PWMGRHSSLVA Trigger: TGCCACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAGGAGCCTCCCTTCTATCGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS GCA 72 bp | TCCAGGGTGGCCAAGACAGCTGGGGAGTCAAAGCCTTaGTGTAACAGGGCTGCTAGGGTGGCCTCTGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SRVAKTAGESKP*CNRAARVASAT Trigger: TGTGGCAGAGGCCACCCTAGCAGCCCTGTTACAGCAAGGCTTTGACTCCCCAGCTGTCTTGGCCACCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | GATAGAAGGGAGGCTCCTTGGGTACCCTGGTGCCCCTaGATGGGTCGCCATAGTAGTCTTGTGGCAGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: DRREAPWVPWCP*MGRHSSLVAAR Trigger: CCGTGCTGCCACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAGGAGCCTCCCTTCTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | CTGGGTCCCGATAGAAGGGAGGCTCCTTGGGTACCCTaGTGCCCCTGGATGGGTCGCCATAGTAGTCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGPDRREAPWVP*CPWMGRHSSLV Trigger: CACAAGACTACTATGGCGACCCATCCAGGGGCACCAGGGTACCCAAGGAGCCTCCCTTCTATCGGGACCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CCA 72 bp | TGCGGGACAGTTTTACCCCCAGATTCCGGGTACAGGTaGCCAGTGTCCTGCAGAGCAGGTAACTGGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGTVLPPDSGYR*PVSCRAGNWPC Trigger: ACAAGGCCAGTTACCTGCTCTGCAGGACACTGGCCACCTGTACCCGGAATCTGGGGGTAAAACTGTCCCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163601.8 ENSMUST00000165457.2 ENSMUST00000169570.8 |
||
| CDS CAA 72 bp | CAACCAGGCATGTTGGGGCCACCTGTCTGGCAGGGGTaGAGTCAACAGGTCTTTCGCAGATATCGTTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPGMLGPPVWQG*SQQVFRRYRCR Trigger: TCTACAACGATATCTGCGAAAGACCTGTTGACTCAACCCCTGCCAGACAGGTGGCCCCAACATGCCTGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS CAA 72 bp | CTCAGCAGGGCCAAAAACTCAGGGTACATGGTCCTCTaGCCCCCAGGTCCTTGGAATGTAGACAAGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSRAKNSGYMVL*PPGPWNVDKSA Trigger: AGCTGACTTGTCTACATTCCAAGGACCTGGGGGCAAGAGGACCATGTACCCTGAGTTTTTGGCCCTGCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS CAA 90 bp | CAGGGCCAAAAACTCAGGGTACATGGTCCTCTTGCCCCCAGGTCCTaGGAATGTAGACAAGTCAGCTTCGTAATTCTCATAAGCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QGQKLRVHGPLAPRS*ECRQVSFVILISQL Trigger: AAGCTGGCTTATGAGAATTACGAAGCTGACTTGTCTACATTCCAAGGACCTGGGGGCAAGAGGACCATGTACCCTGAGTTTTTGGCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS TCA 72 bp | AGACAAGTCAGCTTCGTAATTCTCATAAGCCAGCTTTaGATGGATGCTTTCTCGGGTAGGCCCATAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQVSFVILISQL*MDAFSGRPIAS Trigger: AGAGGCTATGGGCCTACCCGAGAAAGCATCCATTCAAAGCTGGCTTATGAGAATTACGAAGCTGACTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||
| CDS CAA 72 bp | AAACTCAGGGTACATGGTCCTCTTGCCCCCAGGTCCTaGGAATGTAGACAAGTCAGCTTCGTAATTCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: KLRVHGPLAPRS*ECRQVSFVILI Trigger: TATGAGAATTACGAAGCTGACTTGTCTACATTCCAAGGACCTGGGGGCAAGAGGACCATGTACCCTGAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169570.8 |
||