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Pregenerated sensors for CTAG2L2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079532

Ensembl transcript IDs: ENSMUST00000114117.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CCAGACCCTACAGTGTTCCCTGGGCTGGGGCTGCCTGGAGCAGCCTaGCTTCCAGGAGTAGCCAGGGTCCCAGGAGCAGCTGGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PDPTVFPGLGLPGAA*LPGVARVPGAAGLP
Trigger: TGGGAGACCAGCTGCTCCTGGGACCCTGGCTACTCCTGGAAGTCAGGCTGCTCCAGGCAGCCCCAGCCCAGGGAACACTGTAGGGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CCA 90 bp AGCTGCTGCTCCAGACCCTACAGTGTTCCCTGGGCTGGGGCTGCCTaGAGCAGCCTGACTTCCAGGAGTAGCCAGGGTCCCAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SCCSRPYSVPWAGAA*SSLTSRSSQGPRSS
Trigger: GCTGCTCCTGGGACCCTGGCTACTCCTGGAAGTCAGGCTGCTCCAGGCAGCCCCAGCCCAGGGAACACTGTAGGGTCTGGAGCAGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CCA 90 bp GACAGCTGCCTCTTCAGCTGCTGCTCCAGACCCTACAGTGTTCCCTaGGCTGGGGCTGCCTGGAGCAGCCTGACTTCCAGGAGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: DSCLFSCCSRPYSVP*AGAAWSSLTSRSSQ
Trigger: CTGGCTACTCCTGGAAGTCAGGCTGCTCCAGGCAGCCCCAGCCCAGGGAACACTGTAGGGTCTGGAGCAGCAGCTGAAGAGGCAGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS GCA 90 bp AAGTGTCGCCTGCTCACTGTGAGGAATGACAGCTGCCTCTTCAGCTaGTGCTCCAGACCCTACAGTGTTCCCTGGGCTGGGGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: KCRLLTVRNDSCLFS*CSRPYSVPWAGAAW
Trigger: CCAGGCAGCCCCAGCCCAGGGAACACTGTAGGGTCTGGAGCAGCAGCTGAAGAGGCAGCTGTCATTCCTCACAGTGAGCAGGCGACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS GCA 90 bp GCGCCCAGGGACAAGTGTCGCCTGCTCACTGTGAGGAATGACAGCTaGCTCTTCAGCTGCTGCTCCAGACCCTACAGTGTTCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: APRDKCRLLTVRNDS*LFSCCSRPYSVPWA
Trigger: AGCCCAGGGAACACTGTAGGGTCTGGAGCAGCAGCTGAAGAGGCAGCTGTCATTCCTCACAGTGAGCAGGCGACACTTGTCCCTGGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CCA 90 bp TGGAGCAGCCTGACTTCCAGGAGTAGCCAGGGTCCCAGGAGCAGCTaGTCTCCCAGAATCTTGTGGGCAACTCCGAGGGACGTTGCCATG +
Preference number: 5 (lower is better)
Translates to: WSSLTSRSSQGPRSS*SPRILWATPRDVAM
Trigger: CATGGCAACGTCCCTCGGAGTTGCCCACAAGATTCTGGGAGACCAGCTGCTCCTGGGACCCTGGCTACTCCTGGAAGTCAGGCTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CCA 90 bp AGGAGTAGCCAGGGTCCCAGGAGCAGCTGGTCTCCCAGAATCTTGTaGGCAACTCCGAGGGACGTTGCCATGGTCACCTTCAGTTGCCGA +
Preference number: 5 (lower is better)
Translates to: RSSQGPRSSWSPRIL*ATPRDVAMVTFSCR
Trigger: TCGGCAACTGAAGGTGACCATGGCAACGTCCCTCGGAGTTGCCCACAAGATTCTGGGAGACCAGCTGCTCCTGGGACCCTGGCTACTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS GCA 90 bp ACGGGCATTGGCGACCAGGGATCTGCGGGCCATGCCTGCCTCCATTaGAGTCCTGAAAGGCACTGTTACAGAGAACTCCAGGTGTCGATT +
Preference number: 5 (lower is better)
Translates to: TGIGDQGSAGHACLH*SPERHCYRELQVSI
Trigger: AATCGACACCTGGAGTTCTCTGTAACAGTGCCTTTCAGGACTGCAATGGAGGCAGGCATGGCCCGCAGATCCCTGGTCGCCAATGCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS GCA 90 bp ATCTTGTGGGCAACTCCGAGGGACGTTGCCATGGTCACCTTCAGTTaGCGAATTTTGAGAGCTAGCCTGGGCATCCGGAGCTTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: ILWATPRDVAMVTFS*RILRASLGIRSLRP
Trigger: AGGCCTCAAGCTCCGGATGCCCAGGCTAGCTCTCAAAATTCGGCAACTGAAGGTGACCATGGCAACGTCCCTCGGAGTTGCCCACAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS TCA 72 bp ACAGTGTTCCCTGGGCTGGGGCTGCCTGGAGCAGCCTaGCTTCCAGGAGTAGCCAGGGTCCCAGGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: TVFPGLGLPGAA*LPGVARVPGAA
Trigger: AGCTGCTCCTGGGACCCTGGCTACTCCTGGAAGTCAGGCTGCTCCAGGCAGCCCCAGCCCAGGGAACACTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CAA 72 bp AGAGCTAGCCTGGGCATCCGGAGCTTGAGGCCTCAGTaGGCTATCCTCACCTTCTGCCAGCCCTGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: RASLGIRSLRPQ*AILTFCQPCSP
Trigger: GGGAGAGCAGGGCTGGCAGAAGGTGAGGATAGCCAACTGAGGCCTCAAGCTCCGGATGCCCAGGCTAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CAA 72 bp AGCCAGGGTCCCAGGAGCAGCTGGTCTCCCAGAATCTaGTGGGCAACTCCGAGGGACGTTGCCATGGTCACC +
Preference number: 6 (lower is better)
Translates to: SQGPRSSWSPRI*WATPRDVAMVT
Trigger: GGTGACCATGGCAACGTCCCTCGGAGTTGCCCACAAGATTCTGGGAGACCAGCTGCTCCTGGGACCCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CCA 72 bp CAGGGTCCCAGGAGCAGCTGGTCTCCCAGAATCTTGTaGGCAACTCCGAGGGACGTTGCCATGGTCACCTTC +
Preference number: 6 (lower is better)
Translates to: QGPRSSWSPRIL*ATPRDVAMVTF
Trigger: GAAGGTGACCATGGCAACGTCCCTCGGAGTTGCCCACAAGATTCTGGGAGACCAGCTGCTCCTGGGACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CAA 90 bp TCCAGGAGTAGCCAGGGTCCCAGGAGCAGCTGGTCTCCCAGAATCTaGTGGGCAACTCCGAGGGACGTTGCCATGGTCACCTTCAGTTGC +
Preference number: 6 (lower is better)
Translates to: SRSSQGPRSSWSPRI*WATPRDVAMVTFSC
Trigger: GCAACTGAAGGTGACCATGGCAACGTCCCTCGGAGTTGCCCACAAGATTCTGGGAGACCAGCTGCTCCTGGGACCCTGGCTACTCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CAA 90 bp AGCCAGGATACTGTCATTCGCTGTGAACTCCTGCTGAACCATCACTaGCTGGGGACGGGCATTGGCGACCAGGGATCTGCGGGCCATGCC +
Preference number: 6 (lower is better)
Translates to: SQDTVIRCELLLNHH*LGTGIGDQGSAGHA
Trigger: GGCATGGCCCGCAGATCCCTGGTCGCCAATGCCCGTCCCCAGCAAGTGATGGTTCAGCAGGAGTTCACAGCGAATGACAGTATCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS GCA 72 bp ACGGGCATTGGCGACCAGGGATCTGCGGGCCATGCCTaGCTCCATTGCAGTCCTGAAAGGCACTGTTACAGA +
Preference number: 6 (lower is better)
Translates to: TGIGDQGSAGHA*LHCSPERHCYR
Trigger: TCTGTAACAGTGCCTTTCAGGACTGCAATGGAGGCAGGCATGGCCCGCAGATCCCTGGTCGCCAATGCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CAA 90 bp GCAACTCCGAGGGACGTTGCCATGGTCACCTTCAGTTGCCGAATTTaGAGAGCTAGCCTGGGCATCCGGAGCTTGAGGCCTCAGTTGGCT +
Preference number: 6 (lower is better)
Translates to: ATPRDVAMVTFSCRI*RASLGIRSLRPQLA
Trigger: AGCCAACTGAGGCCTCAAGCTCCGGATGCCCAGGCTAGCTCTCAAAATTCGGCAACTGAAGGTGACCATGGCAACGTCCCTCGGAGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS GCA 72 bp GCAACTCCGAGGGACGTTGCCATGGTCACCTTCAGTTaGCGAATTTTGAGAGCTAGCCTGGGCATCCGGAGC +
Preference number: 6 (lower is better)
Translates to: ATPRDVAMVTFS*RILRASLGIRS
Trigger: GCTCCGGATGCCCAGGCTAGCTCTCAAAATTCGGCAACTGAAGGTGACCATGGCAACGTCCCTCGGAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CAA 72 bp ACTGTCATTCGCTGTGAACTCCTGCTGAACCATCACTaGCTGGGGACGGGCATTGGCGACCAGGGATCTGCG +
Preference number: 6 (lower is better)
Translates to: TVIRCELLLNHH*LGTGIGDQGSA
Trigger: CGCAGATCCCTGGTCGCCAATGCCCGTCCCCAGCAAGTGATGGTTCAGCAGGAGTTCACAGCGAATGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS TCA 72 bp GGGATCTGCGGGCCATGCCTGCCTCCATTGCAGTCCTaGAAGGCACTGTTACAGAGAACTCCAGGTGTCGAT +
Preference number: 6 (lower is better)
Translates to: GICGPCLPPLQS*KALLQRTPGVD
Trigger: ATCGACACCTGGAGTTCTCTGTAACAGTGCCTTTCAGGACTGCAATGGAGGCAGGCATGGCCCGCAGATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS TCA 72 bp ACAGCCAGGATACTGTCATTCGCTGTGAACTCCTGCTaGACCATCACTTGCTGGGGACGGGCATTGGCGACC +
Preference number: 6 (lower is better)
Translates to: TARILSFAVNSC*TITCWGRALAT
Trigger: GGTCGCCAATGCCCGTCCCCAGCAAGTGATGGTTCAGCAGGAGTTCACAGCGAATGACAGTATCCTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS CAA 72 bp TGCCGAATTTTGAGAGCTAGCCTGGGCATCCGGAGCTaGAGGCCTCAGTTGGCTATCCTCACCTTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: CRILRASLGIRS*RPQLAILTFCQ
Trigger: CTGGCAGAAGGTGAGGATAGCCAACTGAGGCCTCAAGCTCCGGATGCCCAGGCTAGCTCTCAAAATTCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS TCA 72 bp CGTCCTCGTTTGACAACAGCCACAAACTCCAGGCGCTaGATGTTTCTCATCACCAGGGAGAGCTGGTCAAGG +
Preference number: 6 (lower is better)
Translates to: RPRLTTATNSRR*MFLITRESWSR
Trigger: CCTTGACCAGCTCTCCCTGGTGATGAGAAACATTCAGCGCCTGGAGTTTGTGGCTGTTGTCAAACGAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2
CDS TCA 72 bp CACTGTTACAGAGAACTCCAGGTGTCGATTTCTAGTTaGTGCAGTATCACCGTTGCGCCCAGGGACAAGTGT +
Preference number: 6 (lower is better)
Translates to: HCYRELQVSISS*CSITVAPRDKC
Trigger: ACACTTGTCCCTGGGCGCAACGGTGATACTGCATCAACTAGAAATCGACACCTGGAGTTCTCTGTAACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114117.2