Pregenerated sensors for CTAG2L1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079536

Ensembl transcript IDs: ENSMUST00000114125.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GACAGCTGCCTCTTCAGCTGCTGCTCCAGACCCTACAGTGCTCCCTaGGCTGGGGCTGCCTGGAGCAGCCTGACTTCCAGGAGTAGCCAG	+
Preference number: 5 (lower is better) Translates to: DSCLFSCCSRPYSAP*AGAAWSSLTSRSSQ Trigger: CTGGCTACTCCTGGAAGTCAGGCTGCTCCAGGCAGCCCCAGCCCAGGGAGCACTGTAGGGTCTGGAGCAGCAGCTGAAGAGGCAGCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS GCA 90 bp	GGGCCCAGGGACAAGTGTCGCCTGCTCACTGTGAGGAATGACAGCTaGCTCTTCAGCTGCTGCTCCAGACCCTACAGTGCTCCCTGGGCT	+
Preference number: 5 (lower is better) Translates to: GPRDKCRLLTVRNDS*LFSCCSRPYSAPWA Trigger: AGCCCAGGGAGCACTGTAGGGTCTGGAGCAGCAGCTGAAGAGGCAGCTGTCATTCCTCACAGTGAGCAGGCGACACTTGTCCCTGGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS CCA 90 bp	AGGAGTAGCCAGGGTCCCAGGAGCAGCTGGTCTCCCAGAATCTTGTaGGCAACTCTGAGGGACGTTGCCATGGTCACCTTCAGTTGCCGA	+
Preference number: 5 (lower is better) Translates to: RSSQGPRSSWSPRIL*ATLRDVAMVTFSCR Trigger: TCGGCAACTGAAGGTGACCATGGCAACGTCCCTCAGAGTTGCCCACAAGATTCTGGGAGACCAGCTGCTCCTGGGACCCTGGCTACTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS TCA 90 bp	CTTCTTCCTCGTCCTCGTTTGACAACAGCCACAAACTCCAGGCGCTaGATGTTTCTCATCACCAGGGAGAGCTGGTCAAGGAAAGTGTTG	+
Preference number: 5 (lower is better) Translates to: LLPRPRLTTATNSRR*MFLITRESWSRKVL Trigger: CAACACTTTCCTTGACCAGCTCTCCCTGGTGATGAGAAACATTCAGCGCCTGGAGTTTGTGGCTGTTGTCAAACGAGGACGAGGAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS CAA 72 bp	AGCCAGGGTCCCAGGAGCAGCTGGTCTCCCAGAATCTaGTGGGCAACTCTGAGGGACGTTGCCATGGTCACC	+
Preference number: 6 (lower is better) Translates to: SQGPRSSWSPRI*WATLRDVAMVT Trigger: GGTGACCATGGCAACGTCCCTCAGAGTTGCCCACAAGATTCTGGGAGACCAGCTGCTCCTGGGACCCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS GCA 72 bp	GGCGACCAGGGATCTGCGGGCCATGTCTGCCTCCACTaGAGTCCTGAAAGGCACTGTTACAGAGAACTCCAG	+
Preference number: 6 (lower is better) Translates to: GDQGSAGHVCLH*SPERHCYRELQ Trigger: CTGGAGTTCTCTGTAACAGTGCCTTTCAGGACTGCAGTGGAGGCAGACATGGCCCGCAGATCCCTGGTCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS CCA 72 bp	CAGGGTCCCAGGAGCAGCTGGTCTCCCAGAATCTTGTaGGCAACTCTGAGGGACGTTGCCATGGTCACCTTC	+
Preference number: 6 (lower is better) Translates to: QGPRSSWSPRIL*ATLRDVAMVTF Trigger: GAAGGTGACCATGGCAACGTCCCTCAGAGTTGCCCACAAGATTCTGGGAGACCAGCTGCTCCTGGGACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS CCA 72 bp	CCAGGCTTCGATTTCCAGTTGATGCAGCATCACCGCTaGGCCCAGGGACAAGTGTCGCCTGCTCACTGTGAG	+
Preference number: 6 (lower is better) Translates to: PGFDFQLMQHHR*AQGQVSPAHCE Trigger: CTCACAGTGAGCAGGCGACACTTGTCCCTGGGCCCAGCGGTGATGCTGCATCAACTGGAAATCGAAGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS CAA 90 bp	TCCAGGAGTAGCCAGGGTCCCAGGAGCAGCTGGTCTCCCAGAATCTaGTGGGCAACTCTGAGGGACGTTGCCATGGTCACCTTCAGTTGC	+
Preference number: 6 (lower is better) Translates to: SRSSQGPRSSWSPRI*WATLRDVAMVTFSC Trigger: GCAACTGAAGGTGACCATGGCAACGTCCCTCAGAGTTGCCCACAAGATTCTGGGAGACCAGCTGCTCCTGGGACCCTGGCTACTCCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS CAA 90 bp	AGCCAGGATACTGTCATTCGCTGTGAACTCCTGCTGAACCATCACTaGCTGGGGATGGGCATTGGCGACCAGGGATCTGCGGGCCATGTC	+
Preference number: 6 (lower is better) Translates to: SQDTVIRCELLLNHH*LGMGIGDQGSAGHV Trigger: GACATGGCCCGCAGATCCCTGGTCGCCAATGCCCATCCCCAGCAAGTGATGGTTCAGCAGGAGTTCACAGCGAATGACAGTATCCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS TCA 72 bp	GGGATCTGCGGGCCATGTCTGCCTCCACTGCAGTCCTaGAAGGCACTGTTACAGAGAACTCCAGGCTTCGAT	+
Preference number: 6 (lower is better) Translates to: GICGPCLPPLQS*KALLQRTPGFD Trigger: ATCGAAGCCTGGAGTTCTCTGTAACAGTGCCTTTCAGGACTGCAGTGGAGGCAGACATGGCCCGCAGATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS GCA 72 bp	GCAACTCTGAGGGACGTTGCCATGGTCACCTTCAGTTaGCGAATTTTGAGAGCTAGCCTGGGCATCCGGAGC	+
Preference number: 6 (lower is better) Translates to: ATLRDVAMVTFS*RILRASLGIRS Trigger: GCTCCGGATGCCCAGGCTAGCTCTCAAAATTCGGCAACTGAAGGTGACCATGGCAACGTCCCTCAGAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS CAA 72 bp	ACTGTCATTCGCTGTGAACTCCTGCTGAACCATCACTaGCTGGGGATGGGCATTGGCGACCAGGGATCTGCG	+
Preference number: 6 (lower is better) Translates to: TVIRCELLLNHH*LGMGIGDQGSA Trigger: CGCAGATCCCTGGTCGCCAATGCCCATCCCCAGCAAGTGATGGTTCAGCAGGAGTTCACAGCGAATGACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS TCA 72 bp	ACAGCCAGGATACTGTCATTCGCTGTGAACTCCTGCTaGACCATCACTTGCTGGGGATGGGCATTGGCGACC	+
Preference number: 6 (lower is better) Translates to: TARILSFAVNSC*TITCWGWALAT Trigger: GGTCGCCAATGCCCATCCCCAGCAAGTGATGGTTCAGCAGGAGTTCACAGCGAATGACAGTATCCTGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS CAA 72 bp	GCACTGTTACAGAGAACTCCAGGCTTCGATTTCCAGTaGATGCAGCATCACCGCTGGGCCCAGGGACAAGTG	+
Preference number: 6 (lower is better) Translates to: ALLQRTPGFDFQ*MQHHRWAQGQV Trigger: CACTTGTCCCTGGGCCCAGCGGTGATGCTGCATCAACTGGAAATCGAAGCCTGGAGTTCTCTGTAACAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114125.2
CDS CAA 72 bp	TGCCGAATTTTGAGAGCTAGCCTGGGCATCCGGAGCTaGAGGCCTCAGTTGGCTATCCTCACCTTCTTCAAG	+
Preference number: 6 (lower is better) Translates to: CRILRASLGIRS*RPQLAILTFFK Trigger: CTTGAAGAAGGTGAGGATAGCCAACTGAGGCCTCAAGCTCCGGATGCCCAGGCTAGCTCTCAAAATTCGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114125.2