Pregenerated sensors for CSTF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027176Ensembl transcript IDs: ENSMUST00000028599.8
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTaGAAAGGAACAAGATGTGGCGTTGTCATTTTGTACTGTTATTTA | + |
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Preference number: 1 (lower is better) Translates to: CGKLTNLQVAHTRHP*KGTRCGVVILYCYL Trigger: TAAATAACAGTACAAAATGACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTCATTTTGCAAAACAGGAGTCCTaGGTAAGAGTTTTTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SGTYKTPLKRNKMWRCHFAKQES*VRVFLS Trigger: TGAGAGAAAAACTCTTACCCAGGACTCCTGTTTTGC...AAAATGACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| 3UTR TCA 72 bp | CTTACAAATCTTCAAGTGGCACATACAAGACACCCTTaGAAAGGAACAAGATGTGGCGTTGTCATTTTGTAC | + |
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Preference number: 3 (lower is better) Translates to: LTNLQVAHTRHP*KGTRCGVVILY Trigger: GTACAAAATGACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR TCA 90 bp | AGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTCATTTTTACCAGATATCAGGGTaGTGGCCCAGCACAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SGTYKTPLKRNKMWRCHFYQISG*WPSTRR Trigger: CCTCCTTGTGCTGGGCCATCACCCTGATATCTGGTA...AAAATGACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | CTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGTTTCCACTGGGCCGTTaGCTTCCACAGCCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LWKTYKSSSGTYKTPLKRFPLGR*LPQPAL Trigger: CAGAGCTGGCTGTGGAAGGCAACGGCCCAGTGGAAA...CCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAAGCGGCAGGAGGCACTaGAAACACTCCACCGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: FSQEPYDRGTNDNTTLFPSGRRH*KHSTGD Trigger: GTCCCCGGTGGAGTGTTTCCAGTGCCTCCTGCCGCT...TGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR TCA 90 bp | AGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTCATTTTATTCTGAGGAGGCACTaGAGGAGCATTGCGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SGTYKTPLKRNKMWRCHFILRRH*RSIAVQ Trigger: TTGGACCGCAATGCTCCTTCAGTGCCTCCTCAGAAT...AAAATGACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | TCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTCATGTCCCCCTTTTCTaGAAGCAGCTTACTCGACTG | + |
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Preference number: 4 (lower is better) Translates to: SSSGTYKTPLKRNKMWRCHVPLF*KQLTRL Trigger: CAGTCGAGTAAGCTGCTTGCAGAAAAGGGGGACATG...ACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | ACATATGACTTAAGAGGCAAAACAGGAGTCCTGGGTAAGAGTTTTTCTCTCAGACTGTGCGAAGAGGGTTaGTCTTCTCCCACTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: TYDLRGKTGVLGKSFSLRLCEEG*SSPTGC Trigger: ACATCCAGTGGGAGAAGAGCAACCCTCTTCGCACAG...TCTGAGAGAAAAACTCTTACCCAGGACTCCTGTTTTGCCTCTTAAGTCATATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | TCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTTTTCTTCACCTTCTCTaGGACATATTCCGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSSGTYKTPLKRNKMWRCFLHLL*DIFRCL Trigger: CAGGCAGCGGAATATGTCCCAGAGAAGGTGAAGAAA...ACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR TCA 90 bp | TCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTTATAGCCCAGTGCTTTaGGTTCACTTGCAGAACAAG | + |
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Preference number: 4 (lower is better) Translates to: SSSGTYKTPLKRNKMWRCYSPVL*VHLQNK Trigger: CTTGTTCTGCAAGTGAACTCAAAGCACTGGGCTATA...ACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | GTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGAAAGAATCTGCCAGAACTaGGGAACTGGGCAACAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VENLQIFKWHIQDTLEKERICQN*GTGQQG Trigger: GCCTTGTTGCCCAGTTCCCCAGTTCTGGCAGATTCT...TTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAAGCACTACTTTCCACTaGGCCGTTGCCTTCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: FSQEPYDRGTNDNTTLFPSTTFH*AVAFHS Trigger: GCTGTGGAAGGCAACGGCCCAGTGGAAAGTAGTGCT...TGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | ACATATGACTTAAGAGGCAAAACAGGAGTCCTGGGTAAGAGTTTTTCTCTCAGAGGAAGGAGCTACAACTaGGTCTGGAATTATAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TYDLRGKTGVLGKSFSLRGRSYN*VWNYSS Trigger: GCTGCTATAATTCCAGACCCAGTTGTAGCTCCTTCC...TCTGAGAGAAAAACTCTTACCCAGGACTCCTGTTTTGCCTCTTAAGTCATATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | CTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGTCAGAACAGGCACTATaGAAGGAGCTACAACTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LWKTYKSSSGTYKTPLKRSEQAL*KELQLG Trigger: ACCCAGTTGTAGCTCCTTCCATAGTGCCTGTTCTGA...CCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | CTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGCATCTGCTGAGTGTCTaGCTTAGGGTACTCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LWKTYKSSSGTYKTPLKRHLLSV*LRVLRF Trigger: AAACCTGAGTACCCTAAGCCAGACACTCAGCAGATG...CCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR TCA 90 bp | ACATATGACTTAAGAGGCAAAACAGGAGTCCTGGGTAAGAGTTTTTCTCTCAGATTCTTCATCTTCGTCTaGATCCTCGTTGGGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TYDLRGKTGVLGKSFSLRFFIFV*ILVGPF Trigger: AAAAGGCCCAACGAGGATTCAGACGAAGATGAAGAA...TCTGAGAGAAAAACTCTTACCCAGGACTCCTGTTTTGCCTCTTAAGTCATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | TTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAAACAGTTTCCAGAATCTaGCAGAACTGGGGAACTGGG | + |
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Preference number: 4 (lower is better) Translates to: FLKNHMTEAPMTIQLCFQTVSRI*QNWGTG Trigger: CCCAGTTCCCCAGTTCTGGCAGATTCTGGAAACTGT...TTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | TCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTTGTCTCGTATTCCTTTaGTACACGTCTAGCATTCAT | + |
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Preference number: 4 (lower is better) Translates to: SSSGTYKTPLKRNKMWRCCLVFL*YTSSIH Trigger: ATGAATGCTAGACGTGTAGCAAAGGAATACGAGACA...ACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | ACATATGACTTAAGAGGCAAAACAGGAGTCCTGGGTAAGAGTTTTTCTCTCAGAATGTCGTGGCTGAAATaGAATCATCTGCTGAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: TYDLRGKTGVLGKSFSLRMSWLK*NHLLSV Trigger: GACACTCAGCAGATGATTCCATTTCAGCCACGACAT...TCTGAGAGAAAAACTCTTACCCAGGACTCCTGTTTTGCCTCTTAAGTCATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR TCA 90 bp | TTTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAAATGGAATCATCTGCTaGGTGTCTGGCTTAGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: FSQEPYDRGTNDNTTLFPNGIIC*VSGLGY Trigger: GTACCCTAAGCCAGACACTCAGCAGATGATTCCATT...TGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | AGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTCATTTTCCTTCTCATACTTCATaGGACTCTCTTCATAATCTG | + |
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Preference number: 4 (lower is better) Translates to: SGTYKTPLKRNKMWRCHFPSHTS*DSLHNL Trigger: CAGATTATGAAGAGAGTCGCATGAAGTATGAGAAGG...AAAATGACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | TTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAATCGCTTCTGCTGCCGTaGTCTGTAAATGTCATGAAC | + |
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Preference number: 4 (lower is better) Translates to: FLKNHMTEAPMTIQLCFQSLLLP*SVNVMN Trigger: GTTCATGACATTTACAGAGCACGGCAGCAGAAGCGA...TTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | TCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTTATTCTCTGATTTTCTaGATAAGATCCTACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SSSGTYKTPLKRNKMWRCYSLIF*IRSYSF Trigger: GAAGCTGTAGGATCTTATGCAGAAAATCAGAGAATA...ACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | TTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAATTGCTCTTCTCCCACTaGATGTACTTCTTCCACATG | + |
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Preference number: 4 (lower is better) Translates to: FLKNHMTEAPMTIQLCFQLLFSH*MYFFHM Trigger: CATGTGGAAGAAGTACATCCAGTGGGAGAAGAGCAA...TTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAGACTGTTCCAGATACTaGGCAGCTTCATACCAGATA | + |
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Preference number: 4 (lower is better) Translates to: FSQEPYDRGTNDNTTLFPDCSRY*AASYQI Trigger: TATCTGGTATGAAGCTGCCCAGTATCTGGAACAGTC...TGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | AAAACTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAGAAGCAGATAGGAGGTaGGAGCAGTTTCATCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: KTVENLQIFKWHIQDTLEEADRR*EQFHQN Trigger: GTTTTGATGAAACTGCTCCCACCTCCTATCTGCTTC...TTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | ACATATGACTTAAGAGGCAAAACAGGAGTCCTGGGTAAGAGTTTTTCTCTCAGATTCCTCAACAGTGTTTaGTATCTTGCATCTTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: TYDLRGKTGVLGKSFSLRFLNSV*YLASSE Trigger: TTCCGAAGATGCAAGATACCAAACACTGTTGAGGAA...TCTGAGAGAAAAACTCTTACCCAGGACTCCTGTTTTGCCTCTTAAGTCATATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR TCA 90 bp | GTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGAATACCCTTGGTTTCTCTaGCGTATGAAAGATAACACT | + |
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Preference number: 4 (lower is better) Translates to: VENLQIFKWHIQDTLEKEYPWFL*RMKDNT Trigger: AGTGTTATCTTTCATACGTCAGAGAAACCAAGGGTA...TTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | CTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGTTCGTAAGTCTTCCGTaGTTTGTCTATAGGTTGATT | + |
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Preference number: 4 (lower is better) Translates to: LWKTYKSSSGTYKTPLKRFVSLP*FVYRLI Trigger: AATCAACCTATAGACAAAGCACGGAAGACTTACGAA...CCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAATATTCCATGAGGGCTaGAGTTACATAGACATGATG | + |
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Preference number: 4 (lower is better) Translates to: FSQEPYDRGTNDNTTLFPIFHEG*SYIDMM Trigger: CATCATGTCTATGTAACTGCAGCCCTCATGGAATAT...TGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR TCA 90 bp | TTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAATATTATTGTCCTCATTaGGGTGAGAGAGATAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: FLKNHMTEAPMTIQLCFQYYCPH*GERDSQ Trigger: TTGACTATCTCTCTCACCTCAATGAGGACAATAATA...TTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCACAGTGTTTGGTATCTTaGATCTTCGGAAAATTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSQEPYDRGTNDNTTLFPQCLVS*IFGKFP Trigger: TGGAAATTTTCCGAAGATGCAAGATACCAAACACTG...TGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | AAAACTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAGAATATATACTAAGGTaGGGTCAATGTCCTCAATTG | + |
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Preference number: 4 (lower is better) Translates to: KTVENLQIFKWHIQDTLEEYILR*GQCPQL Trigger: CAATTGAGGACATTGACCCCACCTTAGTATATATTC...TTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR GCA 90 bp | AAAACTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAGTCAATGTCCTCAATTaGCAGAAGTCTGTTATATAT | + |
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Preference number: 4 (lower is better) Translates to: KTVENLQIFKWHIQDTLEVNVLN*QKSVIY Trigger: ATATATAACAGACTTCTGGCAATTGAGGACATTGAC...TTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CCA 90 bp | TTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAATTCAATGTTGATCATTaGATTAACACAACCTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: FLKNHMTEAPMTIQLCFQFNVDH*INTTSL Trigger: CAACGAGGTTGTGTTAATCCAATGATCAACATTGAA...TTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS GCA 90 bp | GCCAGAACTGGGGAACTGGGCAACAAGGCGTTCGTAAGTCTTCCGTaGTTTGTCTATAGGTTGATTCTGTGCCTCTCGAATGAGAATGCT | + |
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Preference number: 5 (lower is better) Translates to: ARTGELGNKAFVSLP*FVYRLILCLSNENA Trigger: AGCATTCTCATTCGAGAGGCACAGAATCAACCTATAGACAAAGCACGGAAGACTTACGAACGCCTTGTTGCCCAGTTCCCCAGTTCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS TCA 90 bp | CATGTCCACTTGCTGAGCTTCTTGAGGAGTATTCTGAGGAGGCACTaGAGGAGCATTGCGGTCCAAACCTTTCATGACTGTCTCGTATTC | + |
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Preference number: 5 (lower is better) Translates to: HVHLLSFLRSILRRH*RSIAVQTFHDCLVF Trigger: GAATACGAGACAGTCATGAAAGGTTTGGACCGCAATGCTCCTTCAGTGCCTCCTCAGAATACTCCTCAAGAAGCTCAGCAAGTGGACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS GCA 90 bp | AAAGGCAACAGATTTGTCCTTGCTACAGTAATATTCCATGAGGGCTaGAGTTACATAGACATGATGGCGGGTCCTGGCATCCTCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: KGNRFVLATVIFHEG*SYIDMMAGPGILSC Trigger: GCAAGAGAGGATGCCAGGACCCGCCATCATGTCTATGTAACTGCAGCCCTCATGGAATATTACTGTAGCAAGGACAAATCTGTTGCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | TCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTTCCTCGTTGGGCCTTTaGACAGCCTTAGTCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: SSSGTYKTPLKRNKMWRCSSLGL*TALVST Trigger: TGTACTGACTAAGGCTGTCAAAAGGCCCAACGAGGA...ACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS GCA 90 bp | AGGAGCATTGCGGTCCAAACCTTTCATGACTGTCTCGTATTCCTTTaGTACACGTCTAGCATTCATGTAGTCTCTACTCCGATCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: RSIAVQTFHDCLVFL*YTSSIHVVSTPIFN Trigger: ATTGAAGATCGGAGTAGAGACTACATGAATGCTAGACGTGTAGCAAAGGAATACGAGACAGTCATGAAAGGTTTGGACCGCAATGCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | AGTGGCACATACAAGACACCCTTGAAAAGGAACAAGATGTGGCGTTGTCATTTTCATCAGCTCATCCACTaGTACAAAAGGACCCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: SGTYKTPLKRNKMWRCHFHQLIH*YKRTLE Trigger: TTCCAGGGTCCTTTTGTACAAGTGGATGAGCTGATG...AAAATGACAACGCCACATCTTGTTCCTTTTCAAGGGTGTCTTGTATGTGCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | CTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGTCGTCTGAATCCTCGTaGGGCCTTTTGACAGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: LWKTYKSSSGTYKTPLKRSSESS*GLLTAL Trigger: TAAGGCTGTCAAAAGGCCCAACGAGGATTCAGACGA...CCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | GTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAAAGGAACTTCCACATGTCCACTaGCTGAGCTTCTTGAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: VENLQIFKWHIQDTLEKELPHVH*LSFLRS Trigger: ACTCCTCAAGAAGCTCAGCAAGTGGACATGTGGAAG...TTCCTTTTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAACACTTGCTGAGCTTCTaGAGGAGTATTCTGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: FLKNHMTEAPMTIQLCFQHLLSF*RSILRR Trigger: CCTCCTCAGAATACTCCTCAAGAAGCTCAGCAAGTG...TTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | ACATATGACTTAAGAGGCAAAACAGGAGTCCTGGGTAAGAGTTTTTCTCTCAGAGTAGTCTCTCCAGAGTaGTTCAATGTTGATCATTGG | + |
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Preference number: 5 (lower is better) Translates to: TYDLRGKTGVLGKSFSLRVVSPE*FNVDHW Trigger: CCAATGATCAACATTGAACAACTCTGGAGAGACTAC...TCTGAGAGAAAAACTCTTACCCAGGACTCCTGTTTTGCCTCTTAAGTCATATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAGCAAACATAACTCTTTaGGTTATCAGGGTCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FSQEPYDRGTNDNTTLFPANITL*VIRVWS Trigger: GGACCAGACCCTGATAACCAAAAGAGTTATGTTTGC...TGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAATCGTCACTAAATAACTaGGCATTGTTCATGTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: FLKNHMTEAPMTIQLCFQSSLNN*ALFMSP Trigger: GGGGGACATGAACAATGCCAAGTTATTTAGTGACGA...TTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | ACATATGACTTAAGAGGCAAAACAGGAGTCCTGGGTAAGAGTTTTTCTCTCAGAACAGTGTTTGGTATCTaGCATCTTCGGAAAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: TYDLRGKTGVLGKSFSLRTVFGI*HLRKIS Trigger: GGAAATTTTCCGAAGATGCAAGATACCAAACACTGT...TCTGAGAGAAAAACTCTTACCCAGGACTCCTGTTTTGCCTCTTAAGTCATATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAACTTCCTCAACAGTGTTaGGTATCTTGCATCTTCGGA | + |
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Preference number: 5 (lower is better) Translates to: FLKNHMTEAPMTIQLCFQLPQQC*VSCIFG Trigger: TCCGAAGATGCAAGATACCAAACACTGTTGAGGAAG...TTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCATGCTTTGTCTATAGGTaGATTCTGTGCCTCTCGAAT | + |
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Preference number: 5 (lower is better) Translates to: FSQEPYDRGTNDNTTLFPCFVYR*ILCLSN Trigger: ATTCGAGAGGCACAGAATCAACCTATAGACAAAGCA...TGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | AAAACTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAATTAACACAACCTCGTaGATAAACTCTTCGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: KTVENLQIFKWHIQDTLEINTTS*INSSDS Trigger: GCTGTCCGAAGAGTTTATCAACGAGGTTGTGTTAAT...TTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CCA 90 bp | TTCATACTTGTTGTAGTCTCTCCAGAGTTGTTCAATGTTGATCATTaGATTAACACAACCTCGTTGATAAACTCTTCGGACAGCAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: FILVVVSPELFNVDH*INTTSLINSSDSSY Trigger: ATAACTGCTGTCCGAAGAGTTTATCAACGAGGTTGTGTTAATCCAATGATCAACATTGAACAACTCTGGAGAGACTACAACAAGTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAGAACCATATGACAGAGGCACCAATGACAATACAACTTTGTTTCCAACTAAATAACTTGGCATaGTTCATGTCCCCCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLKNHMTEAPMTIQLCFQLNNLA*FMSPFS Trigger: AGAAAAGGGGGACATGAACAATGCCAAGTTATTTAG...TTGGAAACAAAGTTGTATTGTCATTGGTGCCTCTGTCATATGGTTCTTGAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | AAAACTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAAGGTCAATGTCCTCAATaGCCAGAAGTCTGTTATATA | + |
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Preference number: 5 (lower is better) Translates to: KTVENLQIFKWHIQDTLEGQCPQ*PEVCYI Trigger: TATATAACAGACTTCTGGCAATTGAGGACATTGACC...TTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS-3UTR CAA 90 bp | AAAACTGTGGAAAACTTACAAATCTTCAAGTGGCACATACAAGACACCCTTGAATACCTTCTGCTCTCCTaGCAAATTTCATATACTGAA | + |
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Preference number: 5 (lower is better) Translates to: KTVENLQIFKWHIQDTLEYLLLS*QISYTE Trigger: TTCAGTATATGAAATTTGCAAGGAGAGCAGAAGGTA...TTCAAGGGTGTCTTGTATGTGCCACTTGAAGATTTGTAAGTTTTCCACAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CCA 72 bp | TTTGACAGCCTTAGTCAGTACAGCACTACTTTCCACTaGGCCGTTGCCTTCCACAGCCAGCTCTGGGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: FDSLSQYSTTFH*AVAFHSQLWGP Trigger: GGGGCCCCAGAGCTGGCTGTGGAAGGCAACGGCCCAGTGGAAAGTAGTGCTGTACTGACTAAGGCTGTCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 90 bp | ACAGCCCCCTTTTCTTCATCTTCGTCTGAATCCTCGTTGGGCCTTTaGACAGCCTTAGTCAGTACAGCACTACTTTCCACTGGGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: TAPFSSSSSESSLGL*TALVSTALLSTGPL Trigger: CAACGGCCCAGTGGAAAGTAGTGCTGTACTGACTAAGGCTGTCAAAAGGCCCAACGAGGATTCAGACGAAGATGAAGAAAAGGGGGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS GCA 72 bp | TGGTTATCAGGGTCTGGTCCTCTGTGCGAAGAGGGTTaGTCTTCTCCCACTGGATGTACTTCTTCCACATGT | + |
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Preference number: 6 (lower is better) Translates to: WLSGSGPLCEEG*SSPTGCTSSTC Trigger: ACATGTGGAAGAAGTACATCCAGTGGGAGAAGAGCAACCCTCTTCGCACAGAGGACCAGACCCTGATAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 72 bp | TTGGTTATCAGGGTCTGGTCCTCTGTGCGAAGAGGGTaGCTCTTCTCCCACTGGATGTACTTCTTCCACATG | + |
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Preference number: 6 (lower is better) Translates to: LVIRVWSSVRRG*LFSHWMYFFHM Trigger: CATGTGGAAGAAGTACATCCAGTGGGAGAAGAGCAACCCTCTTCGCACAGAGGACCAGACCCTGATAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS GCA 72 bp | GGGGAACTGGGCAACAAGGCGTTCGTAAGTCTTCCGTaGTTTGTCTATAGGTTGATTCTGTGCCTCTCGAAT | + |
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Preference number: 6 (lower is better) Translates to: GELGNKAFVSLP*FVYRLILCLSN Trigger: ATTCGAGAGGCACAGAATCAACCTATAGACAAAGCACGGAAGACTTACGAACGCCTTGTTGCCCAGTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 90 bp | CTGGGCAACAAGGCGTTCGTAAGTCTTCCGTGCTTTGTCTATAGGTaGATTCTGTGCCTCTCGAATGAGAATGCTCCAAGCATCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LGNKAFVSLPCFVYR*ILCLSNENAPSIKV Trigger: GACCTTGATGCTTGGAGCATTCTCATTCGAGAGGCACAGAATCAACCTATAGACAAAGCACGGAAGACTTACGAACGCCTTGTTGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 90 bp | ATAACTCTTTTGGTTATCAGGGTCTGGTCCTCTGTGCGAAGAGGGTaGCTCTTCTCCCACTGGATGTACTTCTTCCACATGTCCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: ITLLVIRVWSSVRRG*LFSHWMYFFHMSTC Trigger: GCAAGTGGACATGTGGAAGAAGTACATCCAGTGGGAGAAGAGCAACCCTCTTCGCACAGAGGACCAGACCCTGATAACCAAAAGAGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS TCA 72 bp | TTGCTGAGCTTCTTGAGGAGTATTCTGAGGAGGCACTaGAGGAGCATTGCGGTCCAAACCTTTCATGACTGT | + |
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Preference number: 6 (lower is better) Translates to: LLSFLRSILRRH*RSIAVQTFHDC Trigger: ACAGTCATGAAAGGTTTGGACCGCAATGCTCCTTCAGTGCCTCCTCAGAATACTCCTCAAGAAGCTCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS TCA 72 bp | AGGCAACAGATTTGTCCTTGCTACAGTAATATTCCATaGGGGCTGCAGTTACATAGACATGATGGCGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RQQICPCYSNIP*GLQLHRHDGGS Trigger: GGACCCGCCATCATGTCTATGTAACTGCAGCCCTCATGGAATATTACTGTAGCAAGGACAAATCTGTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS GCA 72 bp | GCGGTCCAAACCTTTCATGACTGTCTCGTATTCCTTTaGTACACGTCTAGCATTCATGTAGTCTCTACTCCG | + |
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Preference number: 6 (lower is better) Translates to: AVQTFHDCLVFL*YTSSIHVVSTP Trigger: CGGAGTAGAGACTACATGAATGCTAGACGTGTAGCAAAGGAATACGAGACAGTCATGAAAGGTTTGGACCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS GCA 72 bp | AGATTTGTCCTTGCTACAGTAATATTCCATGAGGGCTaGAGTTACATAGACATGATGGCGGGTCCTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: RFVLATVIFHEG*SYIDMMAGPGI Trigger: GATGCCAGGACCCGCCATCATGTCTATGTAACTGCAGCCCTCATGGAATATTACTGTAGCAAGGACAAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CCA 72 bp | ATGTCGTGGCTGAAATGGAATCATCTGCTGAGTGTCTaGCTTAGGGTACTCAGGTTTTCTATCCACTTCATC | + |
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Preference number: 6 (lower is better) Translates to: MSWLKWNHLLSV*LRVLRFSIHFI Trigger: GATGAAGTGGATAGAAAACCTGAGTACCCTAAGCCAGACACTCAGCAGATGATTCCATTTCAGCCACGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 72 bp | ATGATCCTCACGGCTTCCTCAACAGTGTTTGGTATCTaGCATCTTCGGAAAATTTCCATCAGCTCATCCACT | + |
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Preference number: 6 (lower is better) Translates to: MILTASSTVFGI*HLRKISISSST Trigger: AGTGGATGAGCTGATGGAAATTTTCCGAAGATGCAAGATACCAAACACTGTTGAGGAAGCCGTGAGGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 72 bp | TTTTCTTCATCTTCGTCTGAATCCTCGTTGGGCCTTTaGACAGCCTTAGTCAGTACAGCACTACTTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: FSSSSSESSLGL*TALVSTALLST Trigger: AGTGGAAAGTAGTGCTGTACTGACTAAGGCTGTCAAAAGGCCCAACGAGGATTCAGACGAAGATGAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CCA 72 bp | GTTGTAGTCTCTCCAGAGTTGTTCAATGTTGATCATTaGATTAACACAACCTCGTTGATAAACTCTTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: VVVSPELFNVDH*INTTSLINSSD Trigger: GTCCGAAGAGTTTATCAACGAGGTTGTGTTAATCCAATGATCAACATTGAACAACTCTGGAGAGACTACAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 72 bp | GATACCCTCTTCATACTTGTTGTAGTCTCTCCAGAGTaGTTCAATGTTGATCATTGGATTAACACAACCTCG | + |
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Preference number: 6 (lower is better) Translates to: DTLFILVVVSPE*FNVDHWINTTS Trigger: CGAGGTTGTGTTAATCCAATGATCAACATTGAACAACTCTGGAGAGACTACAACAAGTATGAAGAGGGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 72 bp | ACTGAATATATACTAAGGTGGGGTCAATGTCCTCAATaGCCAGAAGTCTGTTATATATACTGTGAACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TEYILRWGQCPQ*PEVCYIYCEPS Trigger: AGAAGGTTCACAGTATATATAACAGACTTCTGGCAATTGAGGACATTGACCCCACCTTAGTATATATTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 90 bp | ATGAATATTGATACCCTCTTCATACTTGTTGTAGTCTCTCCAGAGTaGTTCAATGTTGATCATTGGATTAACACAACCTCGTTGATAAAC | + |
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Preference number: 6 (lower is better) Translates to: MNIDTLFILVVVSPE*FNVDHWINTTSLIN Trigger: GTTTATCAACGAGGTTGTGTTAATCCAATGATCAACATTGAACAACTCTGGAGAGACTACAACAAGTATGAAGAGGGTATCAATATTCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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| CDS CAA 72 bp | TTGTTCAATGTTGATCATTGGATTAACACAACCTCGTaGATAAACTCTTCGGACAGCAGTTATTCTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: LFNVDHWINTTS*INSSDSSYSLI Trigger: AATCAGAGAATAACTGCTGTCCGAAGAGTTTATCAACGAGGTTGTGTTAATCCAATGATCAACATTGAACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028599.8 |
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