Pregenerated sensors for CSTF2T (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053536Ensembl transcript IDs: ENSMUST00000066039.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTACACTGAAAATGCTCAAACTTTCCAAGGACAAAGTAGACCCTTaGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CTLKMLKLSKDKVDP*VSSLPKATLPSVAG Trigger: CCCAGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTTGTCCTTGGAAAGTTTGAGCATTTTCAGTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR CCA 90 bp | AAGAACCTGGAACACAGTATTCCAAAGGACACAGCATGTCTGACGTaGGAGGTATCACAATGGACTGGCAGTGTCTTTGTAGTATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: KNLEHSIPKDTACLT*EVSQWTGSVFVVFQ Trigger: CTGGAATACTACAAAGACACTGCCAGTCCATTGTGATACCTCCCACGTCAGACATGCTGTGTCCTTTGGAATACTGTGTTCCAGGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR TCA 90 bp | GATGTAGTTATTTTCAGGGTACGTGGTAGAGTAACAGTGACAAAGTaGACAGGCCCACTCCTTCCACTCCATAACCTCCATCAAAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: DVVIFRVRGRVTVTK*TGPLLPLHNLHQKA Trigger: AGCTTTTTGATGGAGGTTATGGAGTGGAAGGAGTGGGCCTGTTCACTTTGTCACTGTTACTCTACCACGTACCCTGAAAATAACTACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR CCA 90 bp | TCCAAAGGACACAGCATGTCTGACGTGGGAGGTATCACAATGGACTaGCAGTGTCTTTGTAGTATTCCAGCTGTTGAACTACATAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: SKGHSMSDVGGITMD*QCLCSIPAVELHKE Trigger: TTCTTTATGTAGTTCAACAGCTGGAATACTACAAAGACACTGCCAGTCCATTGTGATACCTCCCACGTCAGACATGCTGTGTCCTTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR CCA 90 bp | AGTATTCCAAAGGACACAGCATGTCTGACGTGGGAGGTATCACAATaGACTGGCAGTGTCTTTGTAGTATTCCAGCTGTTGAACTACATA | + |
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Preference number: 1 (lower is better) Translates to: SIPKDTACLTWEVSQ*TGSVFVVFQLLNYI Trigger: TATGTAGTTCAACAGCTGGAATACTACAAAGACACTGCCAGTCCATTGTGATACCTCCCACGTCAGACATGCTGTGTCCTTTGGAATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR GCA 90 bp | TACAGAGGACTATCACTTGGTCAAGTGGGAACTTGTGCTTGTTTCTaGTCATTAACTAGATATGACATGGTGTCTAGGTGCCACACACTT | + |
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Preference number: 1 (lower is better) Translates to: YRGLSLGQVGTCACF*SLTRYDMVSRCHTL Trigger: AAGTGTGTGGCACCTAGACACCATGTCATATCTAGTTAATGAGCAGAAACAAGCACAAGTTCCCACTTGACCAAGTGATAGTCCTCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTGGGTGGGAGCTTTACTaGAAAACCCTCCATTACTCA | + |
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Preference number: 2 (lower is better) Translates to: KVDPWVSSLPKATLPSVAGWELY*KTLHYS Trigger: TGAGTAATGGAGGGTTTTTCAGTAAAGCTCCCACCC...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTAGCTGTCAGATCACTTaGGCCTCAGTTCTAGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: KVDPWVSSLPKATLPSVASCQIT*ASVLVK Trigger: CTTAACTAGAACTGAGGCCCAAGTGATCTGACAGCT...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAGTAACAGTGACAAAGTaGACAGGCCCACTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: GSFTEKPSITQESPTPCLVTVTK*TGPLLP Trigger: TGGAAGGAGTGGGCCTGTTCACTTTGTCACTGTTAC...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTGCCTTACTTGGTGGATaGTGTAGTTATTTTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: KVDPWVSSLPKATLPSVAALLGG*CSYFQG Trigger: ACCCTGAAAATAACTACATCATCCACCAAGTAAGGC...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTTATCACTTGGTCAAGTaGGAACTTGTGCTTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: KVDPWVSSLPKATLPSVAYHLVK*ELVLVS Trigger: AGAAACAAGCACAAGTTCCCACTTGACCAAGTGATA...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTACAGAAGACAGCTTTTTaGACCACTTCATGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: GSFTEKPSITQESPTPCLQKTAF*TTSCHR Trigger: TCTGTGGCATGAAGTGGTGCAAAAAGCTGTCTTCTG...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTACTTGTGCTTGTTTCTaGTCATTAACTAGATATGAC | + |
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Preference number: 2 (lower is better) Translates to: KVDPWVSSLPKATLPSVATCACF*SLTRYD Trigger: GTCATATCTAGTTAATGAGCAGAAACAAGCACAAGT...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAACATGTTATTCCTCCTaGATCTTCCTCATAGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: GSFTEKPSITQESPTPCLTCYSS*IFLIAL Trigger: TAAGGCTATGAGGAAGATGCAGGAGGAATAACATGT...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAGAAGGAGTAACTAAGTaGTTCTTAGTTGAAAACCAT | + |
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Preference number: 2 (lower is better) Translates to: GSFTEKPSITQESPTPCLEGVTK*FLVENH Trigger: ATGGTTTTCAACTAAGAAGCACTTAGTTACTCCTTC...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR-3UTR GCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATACGCAGTTAACAAAGTaGAGACATGTTATTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDTQLTK*RHVIPP Trigger: AGGAGGAATAACATGTCTGCACTTTGTTAACTGCGT...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR TCA 72 bp | ACCTGGAACACAGTATTCCAAAGGACACAGCATGTCTaGCGTGGGAGGTATCACAATGGACTGGCAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: TWNTVFQRTQHV*RGRYHNGLAVS Trigger: AGACACTGCCAGTCCATTGTGATACCTCCCACGTCAGACATGCTGTGTCCTTTGGAATACTGTGTTCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR CCA 72 bp | AAGGACACAGCATGTCTGACGTGGGAGGTATCACAATaGACTGGCAGTGTCTTTGTAGTATTCCAGCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: KDTACLTWEVSQ*TGSVFVVFQLL Trigger: CAACAGCTGGAATACTACAAAGACACTGCCAGTCCATTGTGATACCTCCCACGTCAGACATGCTGTGTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR CCA 72 bp | CTGATTCCTGCTGACCAAATGGATTCCATCTGCGTATaGATAGTGGTTTATCAAGAACCTGGGTGGGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: LIPADQMDSICV*IVVYQEPGWEL Trigger: AAGCTCCCACCCAGGTTCTTGATAAACCACTATCCATACGCAGATGGAATCCATTTGGTCAGCAGGAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR CCA 72 bp | GAACACAGTATTCCAAAGGACACAGCATGTCTGACGTaGGAGGTATCACAATGGACTGGCAGTGTCTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: EHSIPKDTACLT*EVSQWTGSVFV Trigger: TACAAAGACACTGCCAGTCCATTGTGATACCTCCCACGTCAGACATGCTGTGTCCTTTGGAATACTGTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR GCA 72 bp | GTGCGAACACAGAAGACAGCTTTTTGCACCACTTCATaGCACAGAATAAACTCTGAAGGAGTAACTAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: VRTQKTAFCTTS*HRINSEGVTKC Trigger: GCACTTAGTTACTCCTTCAGAGTTTATTCTGTGGCATGAAGTGGTGCAAAAAGCTGTCTTCTGTGTTCGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR CCA 72 bp | TTCCATCTGCGTATGGATAGTGGTTTATCAAGAACCTaGGTGGGAGCTTTACTGAAAAACCCTCCATTACTC | + |
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Preference number: 3 (lower is better) Translates to: FHLRMDSGLSRT*VGALLKNPPLL Trigger: GAGTAATGGAGGGTTTTTCAGTAAAGCTCCCACCCAGGTTCTTGATAAACCACTATCCATACGCAGATGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR GCA 72 bp | CTATCACTTGGTCAAGTGGGAACTTGTGCTTGTTTCTaGTCATTAACTAGATATGACATGGTGTCTAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: LSLGQVGTCACF*SLTRYDMVSRC Trigger: GCACCTAGACACCATGTCATATCTAGTTAATGAGCAGAAACAAGCACAAGTTCCCACTTGACCAAGTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR GCA 72 bp | AGTGAACACAATCCTTCCCAGTACAAATGCTCTCAGTaGTTAAGAACCTGGAACACAGTATTCCAAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: SEHNPSQYKCSQ*LRTWNTVFQRT Trigger: TGTCCTTTGGAATACTGTGTTCCAGGTTCTTAAGCACTGAGAGCATTTGTACTGGGAAGGATTGTGTTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| 3UTR CCA 72 bp | CAGAGATTTTCTTATAACAAAGACTATAAGAAGTTTTaGGCTAGCAACCGCAATTTCGAAAGCAAGCAATTG | + |
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Preference number: 3 (lower is better) Translates to: QRFSYNKDYKKF*ASNRNFESKQL Trigger: CAATTGCTTGCTTTCGAAATTGCGGTTGCTAGCCCAAAACTTCTTATAGTCTTTGTTATAAGAAAATCTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR TCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTGGCCCAGAGACCGGCTaGGATTTGCCTGGGATCAGT | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVAGPETG*DLPGIS Trigger: ACTGATCCCAGGCAAATCTCAGCCGGTCTCTGGGCC...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTTGCCACCAGAAGGCATaGGTCCACGAGGCATCGGAG | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVACHQKA*VHEASE Trigger: CTCCGATGCCTCGTGGACCCATGCCTTCTGGTGGCA...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTGGCTGGCCTCCACCTTaGTTACTGGCTCCTTGCATG | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVAGWPPP*LLAPCM Trigger: CATGCAAGGAGCCAGTAAGCAAGGTGGAGGCCAGCC...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTTGGCATGCCAACTTGTaGCTGCATTGCTCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVAWHANL*LHCSSW Trigger: CCAGGAGGAGCAATGCAGCCACAAGTTGGCATGCCA...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTGTCCCATATAGCCCCTaGGCTCTACTTCTCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVAVPYSP*ALLLQS Trigger: TGACTGGAGAAGTAGAGCCCAGGGGCTATATGGGAC...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTATGACCATGATGCATTaGAGGACCCTGATGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVAMTMMH*RTLMGW Trigger: CCACCCCATCAGGGTCCTCCAATGCATCATGGTCAT...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTATCACCACTTGTGCCTaGAGCAAAGCATACGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVAITTCA*SKAYAN Trigger: GTTGGCGTATGCTTTGCTGCAGGCACAAGTGGTGAT...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTATGCCAACTTGTGGCTaGATTGCTCCTCCTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVAMPTCG*IAPPGV Trigger: AACTCCAGGAGGAGCAATGCAGCCACAAGTTGGCAT...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAGTCCTCGAGGAGGTATaGCACCAGAAGGCATGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLVLEEV*HQKAWV Trigger: GACCCATGCCTTCTGGTGGCATACCTCCTCGAGGAC...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTGGAGTTACCTGGCTTTaGCCAGGGCTAAAACTGCTA | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVAGVTWL*PGLKLL Trigger: TAGCAGTTTTAGCCCTGGGCAAAGCCAGGTAACTCC...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTCTAAAACTGCTAGGCTaGCCTCCACCTTGCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVALKLLG*PPPCLL Trigger: CAGTAAGCAAGGTGGAGGCCAGCCTAGCAGTTTTAG...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTATGCATCCCTCCTCCTTaGATACCTGCTCCCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLCIPPP*IPAPCI Trigger: GATGCAGGGAGCAGGTATGCAAGGAGGAGGGATGCA...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTAGAAGCCATAACCCTTaGGCTTCCCAGTCTCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVARSHNP*ASQSLY Trigger: ATAGAGAGACTGGGAAGCCCAAGGGTTATGGCTTCT...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTATGCATGCCTGCTCCTTaGATCCCTCCTCCTTGCATA | + |
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Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLCMPAP*IPPPCI Trigger: TATGCAAGGAGGAGGGATGCAAGGAGCAGGCATGCA...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTACTTCACAGGTCTTCTTaGCAGATGCTGAGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLLHRSS*QMLRLR Trigger: CCTCAGCCTCAGCATCTGCCAAGAAGACCTGTGAAG...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR TCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTATTTCGAGCTTCCTGGTaGCTGTTCTGGACACACAAC | + |
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Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLFRASW*LFWTHN Trigger: GTTGTGTGTCCAGAACAGTCACCAGGAAGCTCGAAA...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGCCCTGCATCCCTCCTTaGATGCTAGCTCCCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLPCIPP*MLAPCI Trigger: GATGCAGGGAGCTAGCATGCAAGGAGGGATGCAGGG...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAGGGATCTGCTGCCAATaGTCCTCCTCTCATATCATG | + |
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Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLGICCQ*SSSHIM Trigger: CATGATATGAGAGGAGGACCATTGGCAGCAGATCCC...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTACTCTCTGATCTATCATaGGACCTCTGGGCTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLLSDLS*DLWALQ Trigger: TTGGAGAGCCCAGAGGTCCCATGATAGATCAGAGAG...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR TCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAATAGGTAGACCTCTCTaGTCTATCATGGGACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLIGRPL*SIMGPL Trigger: CAGAGGTCCCATGATAGATCAGAGAGGTCTACCTAT...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTACACACAACTTCATCTaGTTCATGAGCTCAAACATC | + |
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Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVATHNFI*FMSSNI Trigger: GATGTTTGAGCTCATGAAGCAGATGAAGTTGTGTGT...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGGTCCTCTTGCATCCATaGCTCTGGTTTCCATCGCGC | + |
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Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLVLLHP*LWFPSR Trigger: GCGCGATGGAAACCAGAGGCATGGATGCAAGAGGAC...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGTGCTTACTGGCTCCTTaGATGCCAGCTCCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLCLLAP*MPAPCI Trigger: GATGCAGGGAGCTGGCATGCAAGGAGCCAGTAAGCA...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGCGATCGATCCATGGCTaGGTCTCTGACCGCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLRSIHG*VSDRQT Trigger: AGTTTGGCGGTCAGAGACCCAGCCATGGATCGATCG...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAAAAATCAAAATGCTCTaGCTTTGTTCGGGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLKIKML*LCSGGS Trigger: GCTGCCTCCCGAACAAAGGCAGAGCATTTTGATTTT...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGCGGCTGAGATTTGCCTaGGATCAGTGGTGTGACATG | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLRLRFA*DQWCDM Trigger: CATGTCACACCACTGATCCCAGGCAAATCTCAGCCG...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAGCAGGAGGATTCTGTTaGTTCAACATGACGTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLAGGFC*FNMTLG Trigger: ACCTAACGTCATGTTGAACCAACAGAATCCTCCTGC...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGTATTGGCCCCGGAGCTaGAATTCCTCCCTGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLYWPRS*NSSLDR Trigger: TCTATCCAGGGAGGAATTCCAGCTCCGGGGCCAATA...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR TCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGAGACGAGACGGAAACTaGCAACTGAACCAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLRRDGN*QLNQPL Trigger: CAGAGGTTGGTTCAGTTGTCAGTTTCCGTCTCGTCT...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAAAAGCTGCTTTTTCTTaGTCTTGTGGAGTTACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLKAAFS*SCGVTW Trigger: CCAGGTAACTCCACAAGATCAAGAAAAAGCAGCTTT...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTATGCAAAATTTTCAGTaGAATCTCTGGATCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVDPWVSSLPKATLPSVAMQNFQ*NLWIHD Trigger: ATCATGGATCCAGAGATTGCACTGAAAATTTTGCAT...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTATCTAGTAATCGATTCTaGAGCATCTTCTGGGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLSSNRF*SIFWVD Trigger: ATCGACCCAGAAGATGCTCCAGAATCGATTACTAGA...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGTCTCTCCATTCCTCGTaGCTCCAAGACCTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLSLHSS*LQDLSF Trigger: GAAACTGAGGTCTTGGAGCCACGAGGAATGGAGAGA...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGCTGGGATCAGTGGTGTaGCATGTATCTTACGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLLGSVV*HVSYDA Trigger: TGCATCGTAAGATACATGTCACACCACTGATCCCAG...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR GCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATATGAGCTCAAACATCTaGTCTGGGGGCAAGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDMSSNI*SGGKLA Trigger: CGCCAGCTTGCCCCCAGAGCAGATGTTTGAGCTCAT...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTATTTCAGTGCAATCTCTaGATCCATGATTCTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSFTEKPSITQESPTPCLFQCNL*IHDSHH Trigger: GTGATGAGAATCATGGATCCAGAGATTGCACTGAAA...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATAGACCTCAGTTTCCATaGGCCGAGTCTCCATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDRPQFP*AESPSL Trigger: GAGGGATGGAGACTCGGCCCATGGAAACTGAGGTCT...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGTCTTGTGGAGTTACCTaGCTTTGCCCAGGGCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLSCGVT*LCPGLK Trigger: TTTTAGCCCTGGGCAAAGCCAGGTAACTCCACAAGA...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATGTTCGGGAGGCAGCATaGCAATCTGATCCGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDVREAA*QSDPQS Trigger: TGACTGCGGATCAGATTGCCATGCTGCCTCCCGAAC...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGCAATCTCTGGATCCATaGTTCTCATCACCACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLQSLDP*FSSPLV Trigger: CACAAGTGGTGATGAGAATCATGGATCCAGAGATTG...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR TCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATTACTTCTCCAGTCACTaGGAGCAAAGTCCCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDYFSSH*EQSPST Trigger: CGTGGAGGGACTTTGCTCTCAGTGACTGGAGAAGTA...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGAAAATGTCCTTTAACTaGTCCTCCGTCGCCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GEGNLKWLKCANTEDSFLKMSFN*SSVASY Trigger: GTATGAGGCGACGGAGGAGCAGTTAAAGGACATTTT...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR GCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATCTAGGATCTGATATCTaGATCTGTCCTCGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDLGSDI*ICPRSR Trigger: CCTGGAGCGAGGACAGATGCAGATATCAGATCCTAG...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATTTCTGGAGCATCTTCTaGGTCGATAGGGTCCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDFWSIF*VDRVPI Trigger: TATGGGGACCCTATCGACCCAGAAGATGCTCCAGAA...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATCTATCATGGGACCTCTaGGCTCTCCAATTAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDLSWDL*ALQLAF Trigger: GAATGCTAATTGGAGAGCCCAGAGGTCCCATGATAG...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATTTTGCCTGGGATCAGTaGTGTGACATGTATCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDFAWDQ*CDMYLT Trigger: CGTAAGATACATGTCACACCACTGATCCCAGGCAAA...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR GCA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATCTGCATGATCAAAGCTaGTTTTTCTTGATCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDLHDQS*FFLILW Trigger: CCACAAGATCAAGAAAAAGCAGCTTTGATCATGCAG...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 90 bp | TCTGGTTTCCATCGCGCAGGTCTCCATCCTTCTCTCCATTCCTCGTaGCTCCAAGACCTCAGTTTCCATGGGCCGAGTCTCCATCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGFHRAGLHPSLHSS*LQDLSFHGPSLHPS Trigger: CGAGGGATGGAGACTCGGCCCATGGAAACTGAGGTCTTGGAGCCACGAGGAATGGAGAGAAGGATGGAGACCTGCGCGATGGAAACCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS GCA 90 bp | TTGTATACCTGCCCCCTGCATGGTACCTCCAGGATTTCCCACTCCTaGAATATTTGGAACCTGTCTAGGTCCCTGAGGGCCACCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LYTCPLHGTSRISHS*NIWNLSRSLRATCP Trigger: GGGGCAGGTGGCCCTCAGGGACCTAGACAGGTTCCAAATATTGCAGGAGTGGGAAATCCTGGAGGTACCATGCAGGGGGCAGGTATACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS GCA 90 bp | GCTGGTATTGGCCCCGGAGCTGGAATTCCTCCCTGGATAGAGGTCTaGATCAGAGGTGGAATGTCCTTCACAGGTCTTCTTGGCAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: AGIGPGAGIPPWIEV*IRGGMSFTGLLGRC Trigger: GCATCTGCCAAGAAGACCTGTGAAGGACATTCCACCTCTGATGCAGACCTCTATCCAGGGAGGAATTCCAGCTCCGGGGCCAATACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTTCCCTGCATCCCTGCTaGCATGCCAGCTCCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KVDPWVSSLPKATLPSVASLHPC*HASSLH Trigger: ATGCAGGGAGCTGGCATGCAAGCAGGGATGCAGGGA...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS TCA 90 bp | CCAGGATTTCCCACTCCTGCAATATTTGGAACCTGTCTAGGTCCCTaGGGGCCACCTGCCCCCATATTAATAGGGCCAGGACCCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: PGFPTPAIFGTCLGP*GPPAPILIGPGPWI Trigger: AATCCAGGGTCCTGGCCCTATTAATATGGGGGCAGGTGGCCCTCAGGGACCTAGACAGGTTCCAAATATTGCAGGAGTGGGAAATCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS GCA 90 bp | CACTCCTGCAATATTTGGAACCTGTCTAGGTCCCTGAGGGCCACCTaGCCCCATATTAATAGGGCCAGGACCCTGGATTCCACCAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HSCNIWNLSRSLRAT*PHINRARTLDSTSH Trigger: ATGACTGGTGGAATCCAGGGTCCTGGCCCTATTAATATGGGGGCAGGTGGCCCTCAGGGACCTAGACAGGTTCCAAATATTGCAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 90 bp | CCATCCTTCTCTCCATTCCTCGTGGCTCCAAGACCTCAGTTTCCATaGGCCGAGTCTCCATCCCTCGAGATTCTCTACCTCCTCTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSFSPFLVAPRPQFP*AESPSLEILYLLYH Trigger: ATGGTAGAGGAGGTAGAGAATCTCGAGGGATGGAGACTCGGCCCATGGAAACTGAGGTCTTGGAGCCACGAGGAATGGAGAGAAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 90 bp | TGCCCCCTGCATGGTACCTCCAGGATTTCCCACTCCTGCAATATTTaGAACCTGTCTAGGTCCCTGAGGGCCACCTGCCCCCATATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: CPLHGTSRISHSCNI*NLSRSLRATCPHIN Trigger: ATTAATATGGGGGCAGGTGGCCCTCAGGGACCTAGACAGGTTCCAAATATTGCAGGAGTGGGAAATCCTGGAGGTACCATGCAGGGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTGAACTGCAGCTGGTATaGGCCCCGGAGCTGGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: KVDPWVSSLPKATLPSVAELQLV*APELEF Trigger: GAATTCCAGCTCCGGGGCCAATACCAGCTGCAGTTC...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTTTGCTTACTGGCTCCTaGCATGCCAGCTCCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KVDPWVSSLPKATLPSVALLTGS*HASSLH Trigger: ATGCAGGGAGCTGGCATGCAAGGAGCCAGTAAGCAA...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AAAGTAGACCCTTGGGTCAGCTCTCTCCCTAAGGCTACTCTTCCCTCTGTAGCTTGGAGTTACCTGGCTTaGCCCAGGGCTAAAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KVDPWVSSLPKATLPSVAWSYLA*PRAKTA Trigger: AGCAGTTTTAGCCCTGGGCAAAGCCAGGTAACTCCA...AGCTACAGAGGGAAGAGTAGCCTTAGGGAGAGAGCTGACCCAAGGGTCTACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 90 bp | ACCAGGGCCAGGCCCAGAGACCGGCTGAGATTTGCCTGGGATCAGTaGTGTGACATGTATCTTACGATGCAAAATTTTCAGTGCAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRARPRDRLRFAWDQ*CDMYLTMQNFQCNL Trigger: GAGATTGCACTGAAAATTTTGCATCGTAAGATACATGTCACACCACTGATCCCAGGCAAATCTCAGCCGGTCTCTGGGCCTGGCCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 90 bp | CTCTCTGATCTATCATGGGACCTCTGGGCTCTCCAATTAGCATTCTaGGATCTGCTGCCAATGGTCCTCCTCTCATATCATGTGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSDLSWDLWALQLAF*DLLPMVLLSYHVRQ Trigger: CTGCCTCACATGATATGAGAGGAGGACCATTGGCAGCAGATCCCAGAATGCTAATTGGAGAGCCCAGAGGTCCCATGATAGATCAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS CCA 90 bp | CAGCTGGAGAACCTGCATGATCAAAGCTGCTTTTTCTTGATCTTGTaGAGTTACCTGGCTTTGCCCAGGGCTAAAACTGCTAGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLENLHDQSCFFLIL*SYLALPRAKTARLA Trigger: GGCCAGCCTAGCAGTTTTAGCCCTGGGCAAAGCCAGGTAACTCCACAAGATCAAGAAAAAGCAGCTTTGATCATGCAGGTTCTCCAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTACTGCATCCCTCCTCCTaGCATGCCTGCTCCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSFTEKPSITQESPTPCLLHPSS*HACSLH Trigger: ATGCAAGGAGCAGGCATGCAAGGAGGAGGGATGCAG...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTAAGGCTGGCCTCCACCTaGCTTACTGGCTCCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSFTEKPSITQESPTPCLRLAST*LTGSLH Trigger: ATGCAAGGAGCCAGTAAGCAAGGTGGAGGCCAGCCT...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS TCA 90 bp | GGCCAGGCCCAGAGACCGGCTGAGATTTGCCTGGGATCAGTGGTGTaGCATGTATCTTACGATGCAAAATTTTCAGTGCAATCTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GQAQRPAEICLGSVV*HVSYDAKFSVQSLD Trigger: ATCCAGAGATTGCACTGAAAATTTTGCATCGTAAGATACATGTCACACCACTGATCCCAGGCAAATCTCAGCCGGTCTCTGGGCCTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS TCA 90 bp | CCTCGAGATTCTCTACCTCCTCTACCATCCATAGGTAGACCTCTCTaGTCTATCATGGGACCTCTGGGCTCTCCAATTAGCATTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRDSLPPLPSIGRPL*SIMGPLGSPISILG Trigger: TCCCAGAATGCTAATTGGAGAGCCCAGAGGTCCCATGATAGATCAGAGAGGTCTACCTATGGATGGTAGAGGAGGTAGAGAATCTCGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTACCTTCACAGGTCTTCTaGGCAGATGCTGAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSFTEKPSITQESPTPCLPSQVF*ADAEAE Trigger: CTCAGCCTCAGCATCTGCCAAGAAGACCTGTGAAGG...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTATTGCATGCCTGCTCCTaGCATCCCTCCTCCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSFTEKPSITQESPTPCLLHACS*HPSSLH Trigger: ATGCAAGGAGGAGGGATGCAAGGAGCAGGCATGCAA...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTACAACTTGTGGCTGCATaGCTCCTCCTGGAGTTAAGG | + |
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Preference number: 5 (lower is better) Translates to: GSFTEKPSITQESPTPCLQLVAA*LLLELR Trigger: CCTTAACTCCAGGAGGAGCAATGCAGCCACAAGTTG...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGCACTGGCATGCCAACTaGTGGCTGCATTGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GEGNLKWLKCANTEDSFLHWHAN*WLHCSS Trigger: GGAGGAGCAATGCAGCCACAAGTTGGCATGCCAGTG...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGTCCCTGCATCCCTCCTaGCATGCTAGCTCCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: GEGNLKWLKCANTEDSFLSLHPS*HASSLH Trigger: ATGCAGGGAGCTAGCATGCAAGGAGGGATGCAGGGA...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATTTTTCGCTGGCGGCATaGTCCACCCGAAGCGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDFSLAA*STRSAL Trigger: GAGAGCGCTTCGGGTGGACAATGCCGCCAGCGAAAA...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | GGAGAAGGAAACCTTAAATGGTTAAAGTGTGCGAACACAGAAGACAGCTTTTTGGGCAGGAGGATTCTGTaGGTTCAACATGACGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: GEGNLKWLKCANTEDSFLGRRIL*VQHDVR Trigger: CCTAACGTCATGTTGAACCAACAGAATCCTCCTGCC...CAAAAAGCTGTCTTCTGTGTTCGCACACTTTAACCATTTAAGGTTTCCTTCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATCTGCATCCCTCCTCCTaGTATACCTGCCCCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDLHPSS*YTCPLH Trigger: ATGCAGGGGGCAGGTATACAAGGAGGAGGGATGCAG...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | GGGAGCTTTACTGAAAAACCCTCCATTACTCAAGAAAGTCCGACCCCATGTCTATGCTTTTTCTTGATCTaGTGGAGTTACCTGGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: GSFTEKPSITQESPTPCLCFFLI*WSYLAL Trigger: CAAAGCCAGGTAACTCCACAAGATCAAGAAAAAGCA...TAGACATGGGGTCGGACTTTCTTGAGTAATGGAGGGTTTTTCAGTAAAGCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATTTGCATCCCTCCTCCTaGCATACCTGCTCCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDLHPSS*HTCSLH Trigger: ATGCAGGGAGCAGGTATGCAAGGAGGAGGGATGCAA...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATCAAAATGCTCTGCCTTaGTTCGGGAGGCAGCATGGC | + |
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Preference number: 5 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDQNALP*FGRQHG Trigger: GCCATGCTGCCTCCCGAACAAAGGCAGAGCATTTTG...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATCTCTTTAACTCCTCCTaGTTCTTTTCGCTGGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDLFNSS*FFSLAA Trigger: TGCCGCCAGCGAAAAGAACAAGGAGGAGTTAAAGAG...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATTCATCTCTAGTCCTCTaGCATCCATGCCTCTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDSSLVL*HPCLWF Trigger: AAACCAGAGGCATGGATGCAAGAGGACTAGAGATGA...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS-3UTR CAA 90 bp | AATACTGTAACAAGTCACTTTCAATTTTTATGTAGTTCCCAGCTTACTCGGGATCAAAGCTGCTTTTTCTaGATCTTGTGGAGTTACCTG | + |
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Preference number: 5 (lower is better) Translates to: NTVTSHFQFLCSSQLTRDQSCFF*ILWSYL Trigger: CAGGTAACTCCACAAGATCAAGAAAAAGCAGCTTTG...ATCCCGAGTAAGCTGGGAACTACATAAAAATTGAAAGTGACTTGTTACAGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS GCA 72 bp | GGTCCACGAGGCATCGGAGGTCTAGGATCTGATATCTaGATCTGTCCTCGCTCCAGGGGCACTGGACCAACC | + |
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Preference number: 6 (lower is better) Translates to: GPRGIGGLGSDI*ICPRSRGTGPT Trigger: GGTTGGTCCAGTGCCCCTGGAGCGAGGACAGATGCAGATATCAGATCCTAGACCTCCGATGCCTCGTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | GGAACCAGGTCCAGGTCCAGGAACTGCAGCTGGTATTaGCCCCGGAGCTGGAATTCCTCCCTGGATAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: GTRSRSRNCSWY*PRSWNSSLDRG Trigger: ACCTCTATCCAGGGAGGAATTCCAGCTCCGGGGCCAATACCAGCTGCAGTTCCTGGACCTGGACCTGGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS GCA 72 bp | CATTTGGAGCATCTCCCAGTAGTCCTCGAGGAGGTATaGCACCAGAAGGCATGGGTCCACGAGGCATCGGAG | + |
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Preference number: 6 (lower is better) Translates to: HLEHLPVVLEEV*HQKAWVHEASE Trigger: CTCCGATGCCTCGTGGACCCATGCCTTCTGGTGGCATACCTCCTCGAGGACTACTGGGAGATGCTCCAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | CATCGCGCAGGTCTCCATCCTTCTCTCCATTCCTCGTaGCTCCAAGACCTCAGTTTCCATGGGCCGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HRAGLHPSLHSS*LQDLSFHGPSL Trigger: GAGACTCGGCCCATGGAAACTGAGGTCTTGGAGCCACGAGGAATGGAGAGAAGGATGGAGACCTGCGCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS GCA 72 bp | GGCACTGGACCAACCACTGGCATGCCAACTTGTGGCTaGATTGCTCCTCCTGGAGTTAAGGAACCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GTGPTTGMPTCG*IAPPGVKEPGP Trigger: TGGACCTGGTTCCTTAACTCCAGGAGGAGCAATGCAGCCACAAGTTGGCATGCCAGTGGTTGGTCCAGTGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS GCA 72 bp | TGCCCCCTGCATGGTACCTCCAGGATTTCCCACTCCTaGAATATTTGGAACCTGTCTAGGTCCCTGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: CPLHGTSRISHS*NIWNLSRSLRA Trigger: GGCCCTCAGGGACCTAGACAGGTTCCAAATATTGCAGGAGTGGGAAATCCTGGAGGTACCATGCAGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | TGGGGGCAAGCTGGCGACTGCTCTAGTAATCGATTCTaGAGCATCTTCTGGGTCGATAGGGTCCCCATAGGG | + |
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Preference number: 6 (lower is better) Translates to: WGQAGDCSSNRF*SIFWVDRVPIG Trigger: CCCTATGGGGACCCTATCGACCCAGAAGATGCTCCAGAATCGATTACTAGAGCAGTCGCCAGCTTGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | CATGGTACCTCCAGGATTTCCCACTCCTGCAATATTTaGAACCTGTCTAGGTCCCTGAGGGCCACCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: HGTSRISHSCNI*NLSRSLRATCP Trigger: GGGGCAGGTGGCCCTCAGGGACCTAGACAGGTTCCAAATATTGCAGGAGTGGGAAATCCTGGAGGTACCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS TCA 72 bp | TCCCATATAGCCCCTGGGCTCTACTTCTCCAGTCACTaGGAGCAAAGTCCCTCCACGTGGGTCATTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SHIAPGLYFSSH*EQSPSTWVIWS Trigger: GCTCCAAATGACCCACGTGGAGGGACTTTGCTCTCAGTGACTGGAGAAGTAGAGCCCAGGGGCTATATGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS GCA 72 bp | GGCCCCGGAGCTGGAATTCCTCCCTGGATAGAGGTCTaGATCAGAGGTGGAATGTCCTTCACAGGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GPGAGIPPWIEV*IRGGMSFTGLL Trigger: AAGAAGACCTGTGAAGGACATTCCACCTCTGATGCAGACCTCTATCCAGGGAGGAATTCCAGCTCCGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | CTGCATCAGAGGTGGAATGTCCTTCACAGGTCTTCTTaGCAGATGCTGAGGCTGAGGGGCAGGAGGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: LHQRWNVLHRSS*QMLRLRGRRIL Trigger: CAGAATCCTCCTGCCCCTCAGCCTCAGCATCTGCCAAGAAGACCTGTGAAGGACATTCCACCTCTGATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | TCTCCATTCCTCGTGGCTCCAAGACCTCAGTTTCCATaGGCCGAGTCTCCATCCCTCGAGATTCTCTACCTC | + |
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Preference number: 6 (lower is better) Translates to: SPFLVAPRPQFP*AESPSLEILYL Trigger: GAGGTAGAGAATCTCGAGGGATGGAGACTCGGCCCATGGAAACTGAGGTCTTGGAGCCACGAGGAATGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS TCA 72 bp | GGGATCTGCTGCCAATGGTCCTCCTCTCATATCATGTaGGGCAGGGCCACGGTTGTCATGACCATGATGCAT | + |
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Preference number: 6 (lower is better) Translates to: GICCQWSSSHIM*GRATVVMTMMH Trigger: ATGCATCATGGTCATGACAACCGTGGCCCTGCCTCACATGATATGAGAGGAGGACCATTGGCAGCAGATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS GCA 72 bp | AATATTTGGAACCTGTCTAGGTCCCTGAGGGCCACCTaGCCCCATATTAATAGGGCCAGGACCCTGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: NIWNLSRSLRAT*PHINRARTLDS Trigger: GGAATCCAGGGTCCTGGCCCTATTAATATGGGGGCAGGTGGCCCTCAGGGACCTAGACAGGTTCCAAATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CAA 72 bp | TCTGCATCAGAGGTGGAATGTCCTTCACAGGTCTTCTaGGCAGATGCTGAGGCTGAGGGGCAGGAGGATTCT | + |
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Preference number: 6 (lower is better) Translates to: SASEVECPSQVF*ADAEAEGQEDS Trigger: AGAATCCTCCTGCCCCTCAGCCTCAGCATCTGCCAAGAAGACCTGTGAAGGACATTCCACCTCTGATGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | GGCGACTGCTCTAGTAATCGATTCTGGAGCATCTTCTaGGTCGATAGGGTCCCCATAGGGGGAGTCAATGAT | + |
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Preference number: 6 (lower is better) Translates to: GDCSSNRFWSIF*VDRVPIGGVND Trigger: ATCATTGACTCCCCCTATGGGGACCCTATCGACCCAGAAGATGCTCCAGAATCGATTACTAGAGCAGTCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS TCA 72 bp | TCTCTACCTCCTCTACCATCCATAGGTAGACCTCTCTaGTCTATCATGGGACCTCTGGGCTCTCCAATTAGC | + |
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Preference number: 6 (lower is better) Translates to: SLPPLPSIGRPL*SIMGPLGSPIS Trigger: GCTAATTGGAGAGCCCAGAGGTCCCATGATAGATCAGAGAGGTCTACCTATGGATGGTAGAGGAGGTAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | CTATCATGGGACCTCTGGGCTCTCCAATTAGCATTCTaGGATCTGCTGCCAATGGTCCTCCTCTCATATCAT | + |
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Preference number: 6 (lower is better) Translates to: LSWDLWALQLAF*DLLPMVLLSYH Trigger: ATGATATGAGAGGAGGACCATTGGCAGCAGATCCCAGAATGCTAATTGGAGAGCCCAGAGGTCCCATGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CAA 90 bp | CATGATCAAAGCTGCTTTTTCTTGATCTTGTGGAGTTACCTGGCTTaGCCCAGGGCTAAAACTGCTAGGCTGGCCTCCACCTTGCTTACT | + |
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Preference number: 6 (lower is better) Translates to: HDQSCFFLILWSYLA*PRAKTARLASTLLT Trigger: AGTAAGCAAGGTGGAGGCCAGCCTAGCAGTTTTAGCCCTGGGCAAAGCCAGGTAACTCCACAAGATCAAGAAAAAGCAGCTTTGATCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | AGGCCCAGAGACCGGCTGAGATTTGCCTGGGATCAGTaGTGTGACATGTATCTTACGATGCAAAATTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPRDRLRFAWDQ*CDMYLTMQNFQ Trigger: CTGAAAATTTTGCATCGTAAGATACATGTCACACCACTGATCCCAGGCAAATCTCAGCCGGTCTCTGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS TCA 72 bp | GCTTCCCAGTCTCTCTATCGTAGACGAGACGGAAACTaGCAACTGAACCAACCTCTGAGAAAATGTCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: ASQSLYRRRDGN*QLNQPLRKCPL Trigger: TAAAGGACATTTTCTCAGAGGTTGGTTCAGTTGTCAGTTTCCGTCTCGTCTACGATAGAGAGACTGGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS TCA 72 bp | CAGAGACCGGCTGAGATTTGCCTGGGATCAGTGGTGTaGCATGTATCTTACGATGCAAAATTTTCAGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QRPAEICLGSVV*HVSYDAKFSVQ Trigger: TTGCACTGAAAATTTTGCATCGTAAGATACATGTCACACCACTGATCCCAGGCAAATCTCAGCCGGTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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| CDS CCA 72 bp | AACCTGCATGATCAAAGCTGCTTTTTCTTGATCTTGTaGAGTTACCTGGCTTTGCCCAGGGCTAAAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: NLHDQSCFFLIL*SYLALPRAKTA Trigger: AGCAGTTTTAGCCCTGGGCAAAGCCAGGTAACTCCACAAGATCAAGAAAAAGCAGCTTTGATCATGCAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066039.8 |
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