Pregenerated sensors for CSTF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031256Ensembl transcript IDs: ENSMUST00000033609.9, ENSMUST00000113286.8, ENSMUST00000113287.8, ENSMUST00000136510.3, ENSMUST00000144483.2, ENSMUST00000156778.8
Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATACACACTACGACAACAGAATAAACTGCTTTCCTTTGGAGCAATaGCGATGTAAGACCTCCACCTGGCGCCATCTGCCTCATCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: YTHYDNRINCFPLEQ*RCKTSTWRHLPHPG Trigger: CCCCGGATGAGGCAGATGGCGCCAGGTGGAGGTCTTACATCGCCATTGCTCCAAAGGAAAGCAGTTTATTCTGTTGTCGTAGTGTGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR TCA 90 bp | AAAGATACATATATTCTATGCCCCCAACCAACTAGAGATGATAAATaGGGAAATGACTACTACAAAGCATCCCATAGGCACAACTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: KDTYILCPQPTRDDK*GNDYYKASHRHNWS Trigger: GCTCCAGTTGTGCCTATGGGATGCTTTGTAGTAGTCATTTCCTCATTTATCATCTCTAGTTGGTTGGGGGCATAGAATATATGTATCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR GCA 90 bp | AGAGACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTaGCTTTTCTATGTCACTGTTCATTTAGATGTTGTGATGACAAGA | + |
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Preference number: 1 (lower is better) Translates to: RDKEETNCSSRINAD*LFYVTVHLDVVMTR Trigger: TCTTGTCATCACAACATCTAAATGAACAGTGACATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR TCA 90 bp | GTGCTAGTAAACTTAATAATTATTAAGGCAACTCTTCAAATGTCTTaGGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCA | + |
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Preference number: 1 (lower is better) Translates to: VLVNLIIIKATLQMS*GQTGGEKPSSSLMP Trigger: TGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCTCAAGACATTTGAAGAGTTGCCTTAATAATTATTAAGTTTACTAGCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR TCA 90 bp | TCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTaGTTTGGAACTGGTTGTGTAAAACCCAAGTTCCTAACTAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: STRQLFPKSLQLHLS*FGTGCVKPKFLTRN Trigger: ATTTCTAGTTAGGAACTTGGGTTTTACACAACCAGTTCCAAATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATTTTGCTCCTGTTATGGGTTTTCAACTGGCCTaGGAGACGCAGGGGACGGGC | + |
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Preference number: 2 (lower is better) Translates to: PTHKFSLLLHNWDFAPVMGFQLA*ETQGTG Trigger: GCCCGTCCCCTGCGTCTCTCAGGCCAGTTGAAAACC...CATAACAGGAGCAAAATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR CAA 90 bp | AAGTTGGTCGGACTTGGAAAGAAGCAGGCAACCATAACGGGCAGTTaGCCGTCCGGTGCTCTATACTTGGTCCTCTTTAAAGACTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: KLVGLGKKQATITGS*PSGALYLVLFKDLK Trigger: TTTCAAGTCTTTAAAGAGGACCAAGTATAGAGCACCGGACGGCAAACTGCCCGTTATGGTTGCCTGCTTCTTTCCAAGTCCGACCAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCAGTTCACACCTGCTACTaGCCAAACAACACACTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: WWRETKFLLNATVGEQKAVHTCY*PNNTLG Trigger: TCCAAGTGTGTTGTTTGGTCAGTAGCAGGTGTGAAC...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCATCTTTTGCAAACCAGTaGCACGACAGCCTTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: WWRETKFLLNATVGEQKASFANQ*HDSLCP Trigger: AGGACAAAGGCTGTCGTGGCACTGGTTTGCAAAAGA...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCAGCAAACACACTGTTGTaGTACGCTCTTCCCTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: WWRETKFLLNATVGEQKAANTLL*YALPLL Trigger: CAACAAGGGAAGAGCGTACCACAACAGTGTGTTTGC...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR CAA 90 bp | CACAGAAAATATACACACTACGACAACAGAATAAACTGCTTTCCTTaGGAGCAATGGCGATGTAAGACCTCCACCTGGCGCCATCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: HRKYTHYDNRINCFP*EQWRCKTSTWRHLP Trigger: AGGCAGATGGCGCCAGGTGGAGGTCTTACATCGCCATTGCTCCAAAGGAAAGCAGTTTATTCTGTTGTCGTAGTGTGTATATTTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR TCA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAGTTCACACCTGCTACTaGCCAAACAACACACTTGGA | + |
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Preference number: 2 (lower is better) Translates to: QTGGEKPSSSLMPLWENKVHTCY*PNNTLG Trigger: TCCAAGTGTGTTGTTTGGTCAGTAGCAGGTGTGAAC...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATGCTCAGAGATTACTCTaGACTGGGGAGACAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: LRLWGPTHKFSLLLHNWDAQRLL*TGETNQ Trigger: TTGGTTTGTCTCCCCAGTGCAGAGTAATCTCTGAGC...ATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAATTTCCTTTGGAGCAATaGCGATGTAAGACCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: QTGGEKPSSSLMPLWENKFPLEQ*RCKTST Trigger: GGTGGAGGTCTTACATCGCCATTGCTCCAAAGGAAA...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR CCA 90 bp | AATGAGGAAATGACTACTACAAAGCATCCCATAGGCACAACTGGAGCAAACCAAGTAGAGGTTTTCAACTaGCCTGAGAGACGCAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NEEMTTTKHPIGTTGANQVEVFN*PERRRG Trigger: TCCCCTGCGTCTCTCAGGCCAGTTGAAAACCTCTAC...TTGGTTTGCTCCAGTTGTGCCTATGGGATGCTTTGTAGTAGTCATTTCCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR CAA 90 bp | CAAACAAACCAACCAACCACTGATGAGTGTTTCCATAGTGATGAATaGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: QTNQPTTDECFHSDE*GCHCSCQLSHLNAC Trigger: GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGTGGTTGGTTGGTTTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | CAACTCTTCAAATGTCTTGAGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTAAAGGCAAGGCAACCTaGAGGTTAGCACAGGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: QLFKCLEVKLVERNQVPPKGKAT*RLAQAN Trigger: ATTAGCCTGTGCTAACCTGCAGGTTGCCTTGCCTTT...AGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCTCAAGACATTTGAAGAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATCACCCAATATGCAGCTaGTCAAATGCTGTAATCAGG | + |
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Preference number: 2 (lower is better) Translates to: LRLWGPTHKFSLLLHNWDHPICS*SNAVIR Trigger: CCTGATTACAGCATTTGAGCAGCTGCATATTGGGTG...ATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTTTCCTTTGGAGCAATaGCGATGTAAGACCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: SVSIVMNWDATALVNLVTFPLEQ*RCKTST Trigger: GGTGGAGGTCTTACATCGCCATTGCTCCAAAGGAAA...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGATGAGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTTCTTTTGCAAACCAGTaGCACGACAGCCTTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: TDECFHSDELGCHCSCQLSFANQ*HDSLCP Trigger: AGGACAAAGGCTGTCGTGGCACTGGTTTGCAAAAGA...AAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCAATTGCCTTCCAAGTTaGTCGGACTTGGAAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SVSIVMNWDATALVNLVTNCLPS*SDLERS Trigger: GCTTCTTTCCAAGTCCGACCAACTTGGAAGGCAATT...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGCCCTTGTTGGCCTTCTaGTCATTTTTAGTTCTAACC | + |
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Preference number: 2 (lower is better) Translates to: TKQHTWITGISGSKHTVVPLLAF*SFLVLT Trigger: GGTTAGAACTAAAAATGATCAGAAGGCCAACAAGGG...CACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCACATGTGGAAAACCAGTaGCTTTTTAAACTTGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: WWRETKFLLNATVGEQKAHVENQ*LFKLVK Trigger: CTTTACAAGTTTAAAAAGGCACTGGTTTTCCACATG...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGATGAGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTGACAACAGAATAAACTaGTTTCCTTTGGAGCAATGG | + |
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Preference number: 2 (lower is better) Translates to: TDECFHSDELGCHCSCQLDNRIN*FPLEQW Trigger: CCATTGCTCCAAAGGAAAGCAGTTTATTCTGTTGTC...AAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACAAAGGCAAGGCAACCTaGAGGTTAGCACAGGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: KPKFLTRNTLLLVSASKYKGKAT*RLAQAN Trigger: ATTAGCCTGTGCTAACCTGCAGGTTGCCTTGCCTTT...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAATATATTTCCTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTATGCAGCTGCTCAAATaGTGTAATCAGGGTCACACA | + |
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Preference number: 2 (lower is better) Translates to: FNIFPQVVGTHPQIFIATMQLLK*CNQGHT Trigger: TGTGTGACCCTGATTACAGCATTTGAGCAGCTGCAT...AGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAGGAAATATATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACCAAGTTGGTCGGACTTaGAAAGAAGCAGGCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: KPKFLTRNTLLLVSASKYQVGRT*KEAGNH Trigger: ATGGTTGCCTGCTTCTTTCCAAGTCCGACCAACTTG...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTACAGTCTTGAGGTCAAACTaGTGGAGAGAAACCAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SRSYSIRNHPLNVTLFPTVLRSN*WRETKF Trigger: GAACTTGGTTTCTCTCCACCAGTTTGACCTCAAGAC...TGTAGGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAATATATTTCCTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTATCAGGGTCACACATTaGAATCACCTGGTAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: FNIFPQVVGTHPQIFIATIRVTH*NHLVEV Trigger: AACCTCTACCAGGTGATTCCAATGTGTGACCCTGAT...AGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAGGAAATATATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAATGCTGTAATCAGGGTCACACATTGGAATCACCTGGTAGAGGTTTTCAACTATTGTCTTCTCACATaGACCTGTAGGTTTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SNAVIRVTHWNHLVEVFNYCLLT*TCRFQF Trigger: AAACTGAAACCTACAGGTTCATGTGAGAAGACAATA...GTTGAAAACCTCTACCAGGTGATTCCAATGTGTGACCCTGATTACAGCATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGATGAGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTATAGGCAGGCAGGAGTaGTTGTTGTTTTATACTTTT | + |
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Preference number: 2 (lower is better) Translates to: TDECFHSDELGCHCSCQLIGRQE*LLFYTF Trigger: AAAAGTATAAAACAACAAGCACTCCTGCCTGCCTAT...AAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR CCA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACGTCTTGAGGTCAAACTaGTGGAGAGAAACCAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: KPKFLTRNTLLLVSASKYVLRSN*WRETKF Trigger: GAACTTGGTTTCTCTCCACCAGTTTGACCTCAAGAC...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTACAGGGCTGAAAGCTTTGTaGTTTTCTGAAAGATTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SRSYSIRNHPLNVTLFPTGLKAL*FSERLE Trigger: TTCCAATCTTTCAGAAAATCACAAAGCTTTCAGCCC...TGTAGGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
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| 3UTR CAA 90 bp | ACTGGTTGTGTAAAACCCAAGTTCCTAACTAGAAATACTTTGCTCTaGGTCTCTGCATCTAAATACATTGGTGCTTTTAAGTCAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: TGCVKPKFLTRNTLL*VSASKYIGAFKSRQ Trigger: CTGTCTTGACTTAAAAGCACCAATGTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTTTACACAACCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR TCA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACGGGCTGAAAGCTTTGTaGTTTTCTGAAAGATTGGAA | + |
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Preference number: 2 (lower is better) Translates to: KPKFLTRNTLLLVSASKYGLKAL*FSERLE Trigger: TTCCAATCTTTCAGAAAATCACAAAGCTTTCAGCCC...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACGACAACAGAATAAACTaGTTTCCTTTGGAGCAATGG | + |
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Preference number: 2 (lower is better) Translates to: KPKFLTRNTLLLVSASKYDNRIN*FPLEQW Trigger: CCATTGCTCCAAAGGAAAGCAGTTTATTCTGTTGTC...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTACAATAGGCAGGCAGGAGTaGTTGTTGTTTTATACTTTT | + |
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Preference number: 2 (lower is better) Translates to: SRSYSIRNHPLNVTLFPTIGRQE*LLFYTF Trigger: AAAAGTATAAAACAACAAGCACTCCTGCCTGCCTAT...TGTAGGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
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| 3UTR-3UTR GCA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATCCCACAAATTTTCATTaGTACTTCATAACTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: DKEETNCSSRINADCLFYPTNFH*YFITGI Trigger: AATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGG...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR CAA 90 bp | TTTGGAACTGGTTGTGTAAAACCCAAGTTCCTAACTAGAAATACTTaGCTCTTGGTCTCTGCATCTAAATACATTGGTGCTTTTAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: FGTGCVKPKFLTRNT*LLVSASKYIGAFKS Trigger: TGACTTAAAAGCACCAATGTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTTTACACAACCAGTTCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATGTACTACTATGCTTTTTATGCCTTAAGTAGTGATTTTAATTCACCTGCCACACACTTGGATAACTaGCATTTCTGGAAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: AMYYYAFYALSSDFNSPATHLDN*HFWKQT Trigger: TGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGT...GGCAGGTGAATTAAAATCACTACTTAAGGCATAAAAAGCATAGTAGTACATTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAATATATTTCCTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTTGTAGGTTTCAGTTTTaGGGGCTATTTCATTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: FNIFPQVVGTHPQIFIATCRFQF*GLFHLE Trigger: TTCTAAATGAAATAGCCCCCAAAACTGAAACCTACA...AGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAGGAAATATATTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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| 3UTR GCA 72 bp | GCAACCTGCAGGTTAGCACAGGCTAATGGCACTAATTaGCTTCCAAGTTGGTCGGACTTGGAAAGAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: ATCRLAQANGTN*LPSWSDLERSR Trigger: CCTGCTTCTTTCCAAGTCCGACCAACTTGGAAGGCAATTAGTGCCATTAGCCTGTGCTAACCTGCAGGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR CCA 72 bp | GGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTaGGAGAACAAAAGGCAAGGCAACCTGCAGGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: GGEKPSSSLMPL*ENKRQGNLQVS Trigger: GCTAACCTGCAGGTTGCCTTGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCACCAAGTTGGTCGGACTaGGAAAGAAGCAGGCAACCA | + |
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Preference number: 3 (lower is better) Translates to: WWRETKFLLNATVGEQKAPSWSD*ERSRQP Trigger: TGGTTGCCTGCTTCTTTCCAAGTCCGACCAACTTGG...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CCA 72 bp | TACGACAACAGAATAAACTGCTTTCCTTTGGAGCAATaGCGATGTAAGACCTCCACCTGGCGCCATCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: YDNRINCFPLEQ*RCKTSTWRHLP Trigger: AGGCAGATGGCGCCAGGTGGAGGTCTTACATCGCCATTGCTCCAAAGGAAAGCAGTTTATTCTGTTGTCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR GCA 72 bp | GACAGGAGAGCTTTACGACAATCTTTTGCAAACCAGTaGCACGACAGCCTTTGTCCTATGTATGTTCACACC | + |
|
Preference number: 3 (lower is better) Translates to: DRRALRQSFANQ*HDSLCPMYVHT Trigger: GGTGTGAACATACATAGGACAAAGGCTGTCGTGGCACTGGTTTGCAAAAGATTGTCGTAAAGCTCTCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAAATAAACTGCTTTCCTTaGGAGCAATGGCGATGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RSNWWRETKFLLNATVGEINCFP*EQWRCK Trigger: CTTACATCGCCATTGCTCCAAAGGAAAGCAGTTTAT...TTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR TCA 72 bp | GGCGTCACTGAGGCCTGTTTGTATTGTCTTCTCACATaGACCTGTAGGTTTCAGTTTTGGGGGCTATTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GVTEACLYCLLT*TCRFQFWGLFH Trigger: ATGAAATAGCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACAAACAGGCCTCAGTGACGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| 3UTR GCA 72 bp | ACCACTGATGAGTGTTTCCATAGTGATGAATTGGGATaGCACTGCTCTTGTCAACTTAGTCACCTGAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: TTDECFHSDELG*HCSCQLSHLNA Trigger: GGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CCA 72 bp | ACTGACCAAACAACACACTTGGATAACTGGCATTTCTaGAAGCAAACACACTGTTGTGGTACGCTCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TDQTTHLDNWHF*KQTHCCGTLFP Trigger: AGGGAAGAGCGTACCACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CCA 72 bp | ACACCTGCTACTGACCAAACAACACACTTGGATAACTaGCATTTCTGGAAGCAAACACACTGTTGTGGTACG | + |
|
Preference number: 3 (lower is better) Translates to: TPATDQTTHLDN*HFWKQTHCCGT Trigger: CGTACCACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGTCAGTAGCAGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCCTAACTAGAAATACTTaGCTCTTGGTCTCTGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SDELGCHCSCQLSHLNACLTRNT*LLVSAS Trigger: AGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAG...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR GCA 72 bp | CATCTAAATACATTGGTGCTTTTAAGTCAAGACAGCTaGCAAAACCAACACAGCAAGGACTGCTTCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HLNTLVLLSQDS*QNQHSKDCFCR Trigger: CCTGCAGAAGCAGTCCTTGCTGTGTTGGTTTTGGCAGCTGTCTTGACTTAAAAGCACCAATGTATTTAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CCA 72 bp | GGAAATGACTACTACAAAGCATCCCATAGGCACAACTaGAGCAAACCAACTGACAGAGACAAAGAAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GNDYYKASHRHN*SKPTDRDKEET Trigger: TGTCTCTTCTTTGTCTCTGTCAGTTGGTTTGCTCCAGTTGTGCCTATGGGATGCTTTGTAGTAGTCATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGATGAGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTGACCAAACAACACACTaGGATAACTGGCATTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TDECFHSDELGCHCSCQLDQTTH*DNWHFW Trigger: CCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGTC...AAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR TCA 72 bp | AATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTaGATGCCTGCTAAGCAAATTAAGTTTACTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NWDATALVNLVT*MPAKQIKFTEA Trigger: AGCCTCAGTAAACTTAATTTGCTTAGCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CCA 72 bp | GTATGTTCACACCTGCTACTGACCAAACAACACACTTaGATAACTGGCATTTCTGGAAGCAAACACACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VCSHLLLTKQHT*ITGISGSKHTV Trigger: AACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGTCAGTAGCAGGTGTGAACATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGATGAGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAACTCTTCAAATGTCTaGAGGTCAAACTGGTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TDECFHSDELGCHCSCQLNSSNV*RSNWWR Trigger: TCTCCACCAGTTTGACCTCAAGACATTTGAAGAGTT...AAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGATGAGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTCTGCATCTAAATACATaGGTGCTTTTAAGTCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TDECFHSDELGCHCSCQLLHLNT*VLLSQD Trigger: GTCTTGACTTAAAAGCACCAATGTATTTAGATGCAG...AAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTAATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTAATCAGGGTCACACATaGGAATCACCTGGTAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: DLNQWFSTFLMLQPFNIFNQGHT*ESPGRG Trigger: ACCTCTACCAGGTGATTCCAATGTGTGACCCTGATT...AAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATTAAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| 3UTR TCA 72 bp | GTGATGACAAGAAATCTACATAGGTTTCTGTCACCCTaGGATGATCTTAATCAGTGGTTCTCAACCTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: VMTRNLHRFLSP*DDLNQWFSTFL Trigger: TAGGAAGGTTGAGAACCACTGATTAAGATCATCTCAGGGTGACAGAAACCTATGTAGATTTCTTGTCATCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACATAAACTGCTTTCCTTaGGAGCAATGGCGATGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KPKFLTRNTLLLVSASKYINCFP*EQWRCK Trigger: CTTACATCGCCATTGCTCCAAAGGAAAGCAGTTTAT...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGTACTACTATGCTTTTTATGCCTTAAGTAGTGATTTTAATTCACCTGCCTCCGGTGCTCTATACTaGGTCCTCTTTAAAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: AMYYYAFYALSSDFNSPASGALY*VLFKDL Trigger: CAAGTCTTTAAAGAGGACCAAGTATAGAGCACCGGA...GGCAGGTGAATTAAAATCACTACTTAAGGCATAAAAAGCATAGTAGTACATTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATAACTCTTCAAATGTCTaGAGGTCAAACTGGTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDNSSNV*RSNWWR Trigger: TCTCCACCAGTTTGACCTCAAGACATTTGAAGAGTT...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTACATCAGCTTCACTTATCTaGATTTGGAACTGGTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRSYSIRNHPLNVTLFPTSASLI*IWNWLC Trigger: ACACAACCAGTTCCAAATCAAGATAAGTGAAGCTGA...TGTAGGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| 3UTR TCA 72 bp | CAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTaGTTTGGAACTGGTTGTGTAAAACCCAAGTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: QLFPKSLQLHLS*FGTGCVKPKFL Trigger: TAGGAACTTGGGTTTTACACAACCAGTTCCAAATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGCGATGTAAGACCTCCACCTGGCGCCATCTGCCTCATCCGGGGAGGTTCTCCTCCTACAGCAGCTaGCATCTGCACTGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWRCKTSTWRHLPHPGRFSSYSS*HLHWGW Trigger: CCAGCCCCAGTGCAGATGGCAGCTGCTGTAGGAGGA...GAACCTCCCCGGATGAGGCAGATGGCGCCAGGTGGAGGTCTTACATCGCCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGCGATGTAAGACCTCCACCTGGCGCCATCTGCCTCATCCGGGGAGGTTCTCCCCGCTGCATAGCTaGTCTGGGGTCTTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWRCKTSTWRHLPHPGRFSPLHS*SGVLHW Trigger: CCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGA...GAACCTCCCCGGATGAGGCAGATGGCGCCAGGTGGAGGTCTTACATCGCCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR TCA 90 bp | CAATGGCGATGTAAGACCTCCACCTGGCGCCATCTGCCTCATCCGGGGAGGTTCGGTCCACGACCTTCATaGCCAGGAACATGGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QWRCKTSTWRHLPHPGRFGPRPS*PGTWCM Trigger: CATGCACCATGTTCCTGGTCATGAAGGTCGTGGACC...GAACCTCCCCGGATGAGGCAGATGGCGCCAGGTGGAGGTCTTACATCGCCATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCGCCATCTGCCTCATCCGGGGAGGTTCGGATGCAGACGTCATTATGTTTTGGCAAGGCTCCCCGCTaGATAGCTGCTCTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAPSASSGEVRMQTSLCFGKAPR*IAALGS Trigger: AGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCC...AAAACATAATGACGTCTGCATCCGAACCTCCCCGGATGAGGCAGATGGCGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR CCA 90 bp | CAATGGCGATGTAAGACCTCCACCTGGCGCCATCTGCCTCATCCGGGGAGGTTCCTGATGAGGTGGTGGTaGTGGTCCCAGGTAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QWRCKTSTWRHLPHPGRFLMRWW*WSQVSS Trigger: AGAGCTTACCTGGGACCACCACCACCACCTCATCAG...GAACCTCCCCGGATGAGGCAGATGGCGCCAGGTGGAGGTCTTACATCGCCATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGCGATGTAAGACCTCCACCTGGCGCCATCTGCCTCATCCGGGGAGGTTCGCCAGCTGTGGATTCTaGAGCAACATGTTTCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QWRCKTSTWRHLPHPGRFASCGF*SNMFRA Trigger: AGCACGAAACATGTTGCTTCAGAATCCACAGCTGGC...GAACCTCCCCGGATGAGGCAGATGGCGCCAGGTGGAGGTCTTACATCGCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCGCCATCTGCCTCATCCGGGGAGGTTCGGATGCAGACGTCATTATGTTTTTGCATGCTTGCTCCTTaGATGCCTGCTCCCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LAPSASSGEVRMQTSLCFCMLAP*MPAPCM Trigger: CATGCAGGGAGCAGGCATGCAAGGAGCAAGCATGCA...AAAACATAATGACGTCTGCATCCGAACCTCCCCGGATGAGGCAGATGGCGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCGCCATCTGCCTCATCCGGGGAGGTTCGGATGCAGACGTCATTATGTTTTATGAGGTGGTGGTGGTaGTCCCAGGTAAGCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPSASSGEVRMQTSLCFMRWWW*SQVSSR Trigger: CCTAGAGCTTACCTGGGACCACCACCACCACCTCAT...AAAACATAATGACGTCTGCATCCGAACCTCCCCGGATGAGGCAGATGGCGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCGCCATCTGCCTCATCCGGGGAGGTTCGGATGCAGACGTCATTATGTTTTGAAGTGCTCTCCCGCTaGATTCACGCCCATTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAPSASSGEVRMQTSLCFEVLSR*IHAHSS Trigger: ACTTGAATGGGCGTGAATTCAGCGGGAGAGCACTTC...AAAACATAATGACGTCTGCATCCGAACCTCCCCGGATGAGGCAGATGGCGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCGCCATCTGCCTCATCCGGGGAGGTTCGGATGCAGACGTCATTATGTTTTAAAGCAGCCTTCTCATaGTCCTGGGGTGTGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPSASSGEVRMQTSLCFKAAFS*SWGVTW Trigger: CCAAGTCACACCCCAGGATCATGAGAAGGCTGCTTT...AAAACATAATGACGTCTGCATCCGAACCTCCCCGGATGAGGCAGATGGCGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCTGGCACGAGCCTCCATaGCACGGGCTTCCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SDELGCHCSCQLSHLNACWHEPP*HGLPWH Trigger: GTGCCATGGAAGCCCGTGCCATGGAGGCTCGTGCCA...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCGCCATCTGCCTCATCCGGGGAGGTTCGGATGCAGACGTCATTATGTTTTCATAAGGTGACTCTATaGCAGGTGCACCAGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAPSASSGEVRMQTSLCFHKVTL*QVHQCQ Trigger: TTGGCACTGGTGCACCTGTCATAGAGTCACCTTATG...AAAACATAATGACGTCTGCATCCGAACCTCCCCGGATGAGGCAGATGGCGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCGCCATCTGCCTCATCCGGGGAGGTTCGGATGCAGACGTCATTATGTTTTTGGCTGAGGGTTGCCTaGAATCAGCGTTGGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: LAPSASSGEVRMQTSLCFWLRVA*NQRWDI Trigger: AATATCCCAACGCTGATTTCAGGCAACCCTCAGCCA...AAAACATAATGACGTCTGCATCCGAACCTCCCCGGATGAGGCAGATGGCGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGCGATGTAAGACCTCCACCTGGCGCCATCTGCCTCATCCGGGGAGGTTCAAACATCTGTTCTGGTaGAAGACTGGCAACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QWRCKTSTWRHLPHPGRFKHLFW*KTGNCF Trigger: AAAGCAGTTGCCAGTCTTCCACCAGAACAGATGTTT...GAACCTCCCCGGATGAGGCAGATGGCGCCAGGTGGAGGTCTTACATCGCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCAAGCTGCCATCTGCACTaGGGCTGGAACTCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WWRETKFLLNATVGEQKASCHLH*GWNSTW Trigger: CCAGGTGGAGTTCCAGCCCCAGTGCAGATGGCAGCT...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCAGCCCTGATGAGGTGGTaGTGGTGGTCCCAGGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WWRETKFLLNATVGEQKAALMRW*WWSQVS Trigger: GCTTACCTGGGACCACCACCACCACCTCATCAGGGC...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCTGGTGTCCATGCCTCTaGCCTCCATGGCACGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDELGCHCSCQLSHLNACWCPCL*PPWHEP Trigger: AGGCTCGTGCCATGGAGGCCAGAGGCATGGACACCA...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAATGCCTGCTCCCTGCATaGCTGGTACCTGTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RSNWWRETKFLLNATVGECLLPA*LVPVWI Trigger: GATCCAGACAGGTACCAGTCATGCAGGGAGCAGGCA...TTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACATGATCCTGGGGTGTaGCTTGGCTCTGTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSNWWRETKFLLNATVGEHDPGV*LGSVQD Trigger: GTCCTGGACAGAGCCAAGTCACACCCCAGGATCATG...TTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAATCCTCCTACAGCAGCTaGCATCTGCACTGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTGGEKPSSSLMPLWENKSSYSS*HLHWGW Trigger: CCAGCCCCAGTGCAGATGGCAGCTGCTGTAGGAGGA...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGTTTGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCGCCCTGATGAGGTGGTaGTGGTGGTCCCAGGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPVCIVFSHEPVGFSFGGALMRW*WWSQVS Trigger: GCTTACCTGGGACCACCACCACCACCTCATCAGGGC...GCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACAAACAGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAAGGGCATCCTCAGGGCTaGTGCTTTCTCCATAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSNWWRETKFLLNATVGEGHPQG*CFLHKV Trigger: CACCTTATGGAGAAAGCATCAGCCCTGAGGATGCCC...TTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGTTTGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTCCCCGCTGCATAGCTaGTCTGGGGTCTTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPVCIVFSHEPVGFSFGGSPLHS*SGVLHW Trigger: CCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGA...GCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACAAACAGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCATGCATGCCTGCTCCCTaGATGACTGGTACCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WWRETKFLLNATVGEQKACMPAP*MTGTCL Trigger: CAGACAGGTACCAGTCATGCAGGGAGCAGGCATGCA...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCTGCATGCTTGCTCCTTaGATGCCTGCTCCCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SDELGCHCSCQLSHLNACCMLAP*MPAPCM Trigger: CATGCAGGGAGCAGGCATGCAAGGAGCAAGCATGCA...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCATCCACCTTGCATGCTTaGTCCTTGCATGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WWRETKFLLNATVGEQKASTLHA*SLHACS Trigger: GGAGCAGGCATGCAAGGAGCAAGCATGCAAGGTGGA...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCAGGCTTCCACCTTGCATaGTTGCTCCTTGCATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WWRETKFLLNATVGEQKAGFHLA*LLLACL Trigger: CAGGCATGCAAGGAGCAAGCATGCAAGGTGGAAGCC...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGAGTGGAATAGGCAGGCAGGAGTGCTTGTTGTTTTATACTTTTCTTGACAGCTGCCATCTGCACTaGGGCTGGAACTCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GMSGIGRQECLLFYTFLDSCHLH*GWNSTW Trigger: CCAGGTGGAGTTCCAGCCCCAGTGCAGATGGCAGCT...GTCAAGAAAAGTATAAAACAACAAGCACTCCTGCCTGCCTATTCCACTCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCACTTGTCCTCGTTCCATaGGCACTGGTCCAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WWRETKFLLNATVGEQKALVLVP*ALVQLL Trigger: AAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAG...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAACCTGTCTGGATCCCTaGGGAACAACTGCCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QTGGEKPSSSLMPLWENKTCLDP*GTTAPM Trigger: CATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGT...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCCTCCCCGCGGGTCATTaGGAGCATCACCTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIVMNWDATALVNLVTLPAGH*EHHLVL Trigger: GAGGACAAGGTGATGCTCCCAATGACCCGCGGGGAG...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGAGTGGAATAGGCAGGCAGGAGTGCTTGTTGTTTTATACTTTTCTTGACAGAGGTGGGCCCCTCTaGTCTAGCATGGGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMSGIGRQECLLFYTFLDRGGPL*SSMGPL Trigger: AAGAGGACCCATGCTAGATCAGAGGGGCCCACCTCT...GTCAAGAAAAGTATAAAACAACAAGCACTCCTGCCTGCCTATTCCACTCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGCCTGCTCCCTGCATaGCTGGTACCTGTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIVMNWDATALVNLVTCLLPA*LVPVWI Trigger: GATCCAGACAGGTACCAGTCATGCAGGGAGCAGGCA...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACCTGGCATAGAAGCTTaGATCATAGGAGGTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSNWWRETKFLLNATVGEPGIEA*IIGGAP Trigger: TGGCGCACCTCCTATGATGCAAGCTTCTATGCCAGG...TTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAAACTGGTCCAGCTCCTTaGATTCCAACTTGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSNWWRETKFLLNATVGETGPAP*IPTWAC Trigger: GCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGT...TTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATGGCAAGGCTCCCCGCTaGATAGCTGCTCTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DKEETNCSSRINADCLFYGKAPR*IAALGS Trigger: AGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCC...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAATGCTCCTTGCATGCCTaGTCCCTGCATGACTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QTGGEKPSSSLMPLWENKCSLHA*SLHDWY Trigger: GTACCAGTCATGCAGGGAGCAGGCATGCAAGGAGCA...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AATGAGGAAATGACTACTACAAAGCATCCCATAGGCACAACTGGAGCAAACCAAAGCTGCCATCTGCACTaGGGCTGGAACTCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NEEMTTTKHPIGTTGANQSCHLH*GWNSTW Trigger: CCAGGTGGAGTTCCAGCCCCAGTGCAGATGGCAGCT...TTGGTTTGCTCCAGTTGTGCCTATGGGATGCTTTGTAGTAGTCATTTCCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATCTGATGAGGTGGTGGTaGTGGTCCCAGGTAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLWGPTHKFSLLLHNWDLMRWW*WSQVSS Trigger: AGAGCTTACCTGGGACCACCACCACCACCTCATCAG...ATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCGTCCGGTGCTCTATACTTGGTCCTCTTTAAAGACTTGAAAATGTCAAAGGCCCTGATGAGGTGGTaGTGGTGGTCCCAGGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSGALYLVLFKDLKMSKALMRW*WWSQVS Trigger: GCTTACCTGGGACCACCACCACCACCTCATCAGGGC...CTTTGACATTTTCAAGTCTTTAAAGAGGACCAAGTATAGAGCACCGGACGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGGATCTCTTCCACCTCTaGCATCCAGAGGTGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKQHTWITGISGSKHTVVDLFHL*HPEVGP Trigger: GGGGCCCACCTCTGGATGCCAGAGGTGGAAGAGATC...CACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCAGGGCTTCCAGTCCTCTaGCATCTAGTCCTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WWRETKFLLNATVGEQKAGLPVL*HLVLLL Trigger: AAGCAAGAGGACTAGATGCCAGAGGACTGGAAGCCC...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATTGGCACGGGCTTCCATaGCACGGGCTTCCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DKEETNCSSRINADCLFYWHGLP*HGLPWH Trigger: GTGCCATGGAAGCCCGTGCCATGGAAGCCCGTGCCA...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATTTTGCTCCTGTTATGTGGCACGAGCCTCCATaGCACGGGCTTCCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTHKFSLLLHNWDFAPVMWHEPP*HGLPWH Trigger: GTGCCATGGAAGCCCGTGCCATGGAGGCTCGTGCCA...CATAACAGGAGCAAAATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | ACTGATGAGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTTGGTGTCCATGCCTCTaGCCTCCATGGCACGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDECFHSDELGCHCSCQLWCPCL*PPWHEP Trigger: AGGCTCGTGCCATGGAGGCCAGAGGCATGGACACCA...AAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGAGTGGAATAGGCAGGCAGGAGTGCTTGTTGTTTTATACTTTTCTTGACTCTAGGTCCAGGTACTaGGCCTCTGGTGTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GMSGIGRQECLLFYTFLDSRSRY*ASGVHA Trigger: GGCATGGACACCAGAGGCCCAGTACCTGGACCTAGA...GTCAAGAAAAGTATAAAACAACAAGCACTCCTGCCTGCCTATTCCACTCATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCACCTGTCTGGATCCCTaGGGAACAACTGCCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIVMNWDATALVNLVTTCLDP*GTTAPM Trigger: CATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGT...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCTCCTGGGGTGTGACTTaGCTCTGTCCAGGACTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SDELGCHCSCQLSHLNACSWGVT*LCPGLK Trigger: CTTTAGTCCTGGACAGAGCCAAGTCACACCCCAGGA...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGAGTGGAATAGGCAGGCAGGAGTGCTTGTTGTTTTATACTTTTCTTGACGGGCATCCTCAGGGCTaGTGCTTTCTCCATAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GMSGIGRQECLLFYTFLDGHPQG*CFLHKV Trigger: CACCTTATGGAGAAAGCATCAGCCCTGAGGATGCCC...GTCAAGAAAAGTATAAAACAACAAGCACTCCTGCCTGCCTATTCCACTCATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCATGGCTGAGGGTTGCCTaGAATCAGCGTTGGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: WWRETKFLLNATVGEQKAWLRVA*NQRWDI Trigger: AATATCCCAACGCTGATTTCAGGCAACCCTCAGCCA...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCGGTCCACGACCTTCATaGCCAGGAACATGGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SVSIVMNWDATALVNLVTGPRPS*PGTWCM Trigger: CATGCACCATGTTCCTGGTCATGAAGGTCGTGGACC...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGGTCTCTGCATCTAAATACATTGGTGCTTTTAAGTCAAGACAGCTGCCAAGAGGTGGGCCCCTCTaGTCTAGCATGGGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLVSASKYIGAFKSRQLPRGGPL*SSMGPL Trigger: AAGAGGACCCATGCTAGATCAGAGGGGCCCACCTCT...TGGCAGCTGTCTTGACTTAAAAGCACCAATGTATTTAGATGCAGAGACCAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTCCACCTTGCATGCTTaGTCCTTGCATGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIVMNWDATALVNLVTSTLHA*SLHACS Trigger: GGAGCAGGCATGCAAGGAGCAAGCATGCAAGGTGGA...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCTTCAAATGTCTTGAGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTCATGGCGATCTGGTCTaGAGTGAGCTGAAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLFKCLEVKLVERNQVPPHGDLV*SELKDL Trigger: CAGGTCCTTCAGCTCACTGCAGACCAGATCGCCATG...AGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCTCAAGACATTTGAAGAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCCTTGTCCTCGTTCCATaGGCACTGGTCCAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSIVMNWDATALVNLVTLVLVP*ALVQLL Trigger: AAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAG...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCTTCAAATGTCTTGAGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTATGAGGTGGTGGTGGTaGTCCCAGGTAAGCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLFKCLEVKLVERNQVPPMRWWW*SQVSSR Trigger: CCTAGAGCTTACCTGGGACCACCACCACCACCTCAT...AGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCTCAAGACATTTGAAGAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGCAGGAACATGGTGCATaGGTGGGCCCTGATGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKQHTWITGISGSKHTVVQEHGA*VGPDEV Trigger: CACCTCATCAGGGCCCACCCATGCACCATGTTCCTG...CACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAACCCTCTGATCTAGCATaGGTCCTCTTGGTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTGGEKPSSSLMPLWENKPSDLA*VLLVLP Trigger: TGGCAGAACCAAGAGGACCCATGCTAGATCAGAGGG...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTACATGGCACGGGCTTCCATaGCACGGGCTTCCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRSYSIRNHPLNVTLFPTWHGLP*HGLPWH Trigger: GTGCCATGGAAGCCCGTGCCATGGAAGCCCGTGCCA...TGTAGGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR CCA 90 bp | AAAAACTCCACACTTCACTGTACTCAGGCAGTTGACCTCATACATTTAGCAGAACAGGTACTGGGCCTCTaGTGTCCATGCCTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNSTLHCTQAVDLIHLAEQVLGL*CPCLWP Trigger: AGGCCAGAGGCATGGACACCAGAGGCCCAGTACCTG...TTCTGCTAAATGTATGAGGTCAACTGCCTGAGTACAGTGAAGTGTGGAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGTTTGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCCATAAGGTGACTCTATaGCAGGTGCACCAGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPVCIVFSHEPVGFSFGGHKVTL*QVHQCQ Trigger: TTGGCACTGGTGCACCTGTCATAGAGTCACCTTATG...GCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACAAACAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR TCA 90 bp | AAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGGTACATGATCCTGGGGTGTaGCTTGGCTCTGTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQHTWITGISGSKHTVVVHDPGV*LGSVQD Trigger: GTCCTGGACAGAGCCAAGTCACACCCCAGGATCATG...TACCACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATGGGGCCTGCGGATTCTaGTGGTTCATTGAAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLWGPTHKFSLLLHNWDGACGF*WFIETL Trigger: CAATGTTTCAATGAACCAGCAGAATCCGCAGGCCCC...ATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | TGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTATTTCATTTCCTCCTACAGCAGCTaGCATCTGCACTGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CIVFSHEPVGFSFGGYFISSYSS*HLHWGW Trigger: CCAGCCCCAGTGCAGATGGCAGCTGCTGTAGGAGGA...AATGAAATAGCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAATTCCAACTTGGGCTTaGATAACTCCTGCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTGGEKPSSSLMPLWENKIPTWA*ITPAGA Trigger: AGCCCCTGCAGGAGTTATGCAAGCCCAAGTTGGAAT...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCACTAAGTGCTGTCTCTTaGTCTTGGTACTCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WWRETKFLLNATVGEQKALSAVS*SWYSQK Trigger: CTTCTGCGAGTACCAAGACCAAGAGACAGCACTTAG...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AATGAGGAAATGACTACTACAAAGCATCCCATAGGCACAACTGGAGCAAACCAACATCTGCACTGGGGCTaGAACTCCACCTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: NEEMTTTKHPIGTTGANQHLHWG*NSTWHR Trigger: TCTATGCCAGGTGGAGTTCCAGCCCCAGTGCAGATG...TTGGTTTGCTCCAGTTGTGCCTATGGGATGCTTTGTAGTAGTCATTTCCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCCCTTGCATTCCAACTTaGGCTTGCATAACTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDELGCHCSCQLSHLNACPCIPT*ACITPA Trigger: TGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGG...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTGGATGCTGGACATGTTGCATTCTAGCTTTGATATGTTTTTCCTCCCCAATGAGGTGGTGGTGGTaGTCCCAGGTAAGCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTGCWTCCILALICFSSPMRWWW*SQVSSR Trigger: CCTAGAGCTTACCTGGGACCACCACCACCACCTCAT...TGGGGAGGAAAAACATATCAAAGCTAGAATGCAACATGTCCAGCATCCAGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCCTCAGGATCTCTTCCACCTCTaGCATCCAGAGGTGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NQWFSTFLMLQPFNIFPQDLFHL*HPEVGP Trigger: GGGGCCCACCTCTGGATGCCAGAGGTGGAAGAGATC...CTGAGGAAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATTGGCACGGGCTTCCATaGCACGGGCTTCCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDWHGLP*HGLPWH Trigger: GTGCCATGGAAGCCCGTGCCATGGAAGCCCGTGCCA...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATTGGCACGAGCCTCCATaGCACGGGCTTCCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDWHEPP*HGLPWH Trigger: GTGCCATGGAAGCCCGTGCCATGGAGGCTCGTGCCA...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCCTCAGTGGTGTCCATGCCTCTaGCCTCCATGGCACGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NQWFSTFLMLQPFNIFPQWCPCL*PPWHEP Trigger: AGGCTCGTGCCATGGAGGCCAGAGGCATGGACACCA...CTGAGGAAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCAGGTACTGGGCCTCTaGTGTCCATGCCTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYQVLGL*CPCLWP Trigger: AGGCCAGAGGCATGGACACCAGAGGCCCAGTACCTG...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATTTTGCTCCTGTTATGTCTAGGTCCAGGTACTaGGCCTCTGGTGTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTHKFSLLLHNWDFAPVMSRSRY*ASGVHA Trigger: GGCATGGACACCAGAGGCCCAGTACCTGGACCTAGA...CATAACAGGAGCAAAATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGAGTGGAATAGGCAGGCAGGAGTGCTTGTTGTTTTATACTTTTCTTGACCTAAAGCCACCAGGCTaGCTTCCACCTTGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMSGIGRQECLLFYTFLDLKPPG*LPPCML Trigger: AAGCATGCAAGGTGGAAGCCAGCCTGGTGGCTTTAG...GTCAAGAAAAGTATAAAACAACAAGCACTCCTGCCTGCCTATTCCACTCATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCGTCCGGTGCTCTATACTTGGTCCTCTTTAAAGACTTGAAAATGTCAAAGGAAGTGCTCTCCCGCTaGATTCACGCCCATTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSGALYLVLFKDLKMSKEVLSR*IHAHSS Trigger: ACTTGAATGGGCGTGAATTCAGCGGGAGAGCACTTC...CTTTGACATTTTCAAGTCTTTAAAGAGGACCAAGTATAGAGCACCGGACGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | TGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTATTTCATTAGAGGTGGGCCCCTCTaGTCTAGCATGGGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CIVFSHEPVGFSFGGYFIRGGPL*SSMGPL Trigger: AAGAGGACCCATGCTAGATCAGAGGGGCCCACCTCT...AATGAAATAGCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR TCA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAATGGTCTGCAGTGAGCTaGAGGACCTGCATAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTGGEKPSSSLMPLWENKWSAVS*RTCIIK Trigger: TTTGATTATGCAGGTCCTTCAGCTCACTGCAGACCA...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AGAACTGGATGCTGGACATGTTGCATTCTAGCTTTGATATGTTTTTCCTCCCCACCTGGCATAGAAGCTTaGATCATAGGAGGTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTGCWTCCILALICFSSPPGIEA*IIGGAP Trigger: TGGCGCACCTCCTATGATGCAAGCTTCTATGCCAGG...TGGGGAGGAAAAACATATCAAAGCTAGAATGCAACATGTCCAGCATCCAGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACTCCACACTTCACTGTACTCAGGCAGTTGACCTCATACATTTAGCAGAACATCTGCACTGGGGCTaGAACTCCACCTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNSTLHCTQAVDLIHLAEHLHWG*NSTWHR Trigger: TCTATGCCAGGTGGAGTTCCAGCCCCAGTGCAGATG...TTCTGCTAAATGTATGAGGTCAACTGCCTGAGTACAGTGAAGTGTGGAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR CCA 90 bp | AAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGGTACTGATGAGGTGGTGGTaGTGGTCCCAGGTAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQHTWITGISGSKHTVVVLMRWW*WSQVSS Trigger: AGAGCTTACCTGGGACCACCACCACCACCTCATCAG...TACCACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCAGGAACATGGTGCATaGGTGGGCCCTGATGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYQEHGA*VGPDEV Trigger: CACCTCATCAGGGCCCACCCATGCACCATGTTCCTG...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCCTCAGCAGGAACATGGTGCATaGGTGGGCCCTGATGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NQWFSTFLMLQPFNIFPQQEHGA*VGPDEV Trigger: CACCTCATCAGGGCCCACCCATGCACCATGTTCCTG...CTGAGGAAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATGATCTCTTCCACCTCTaGCATCCAGAGGTGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDDLFHL*HPEVGP Trigger: GGGGCCCACCTCTGGATGCCAGAGGTGGAAGAGATC...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATTCTAGGTCCAGGTACTaGGCCTCTGGTGTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYSRSRY*ASGVHA Trigger: GGCATGGACACCAGAGGCCCAGTACCTGGACCTAGA...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGAGTGGAATAGGCAGGCAGGAGTGCTTGTTGTTTTATACTTTTCTTGACTGCCCCCATGTTCATTaGATTGGGACCTTGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GMSGIGRQECLLFYTFLDCPHVH*IGTLDS Trigger: GGAATCCAAGGTCCCAATCCAATGAACATGGGGGCA...GTCAAGAAAAGTATAAAACAACAAGCACTCCTGCCTGCCTATTCCACTCATGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CAA 72 bp | TATACACACTACGACAACAGAATAAACTGCTTTCCTTaGGAGCAATGGCGATGTAAGACCTCCACCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YTHYDNRINCFP*EQWRCKTSTWR Trigger: GCGCCAGGTGGAGGTCTTACATCGCCATTGCTCCAAAGGAAAGCAGTTTATTCTGTTGTCGTAGTGTGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| CDS-3UTR TCA 90 bp | ACTGATGAGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTGCTTTCTCCATAAGGTaGCTCTATGACAGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TDECFHSDELGCHCSCQLAFSIR*LYDRCT Trigger: GGTGCACCTGTCATAGAGTCACCTTATGGAGAAAGC...AAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | TGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTATTTCATTGGGCATCCTCAGGGCTaGTGCTTTCTCCATAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CIVFSHEPVGFSFGGYFIGHPQG*CFLHKV Trigger: CACCTTATGGAGAAAGCATCAGCCCTGAGGATGCCC...AATGAAATAGCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGGTCTCTGCATCTAAATACATTGGTGCTTTTAAGTCAAGACAGCTGCCAGCCAGCTGTGGATTCTaGAGCAACATGTTTCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVSASKYIGAFKSRQLPASCGF*SNMFRA Trigger: AGCACGAAACATGTTGCTTCAGAATCCACAGCTGGC...TGGCAGCTGTCTTGACTTAAAAGCACCAATGTATTTAGATGCAGAGACCAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| CDS-3UTR TCA 90 bp | AATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCCTCAGGGTCCACGACCTTCATaGCCAGGAACATGGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: NQWFSTFLMLQPFNIFPQGPRPS*PGTWCM Trigger: CATGCACCATGTTCCTGGTCATGAAGGTCGTGGACC...CTGAGGAAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGAGTGGAATAGGCAGGCAGGAGTGCTTGTTGTTTTATACTTTTCTTGACTGGTCTGCAGTGAGCTaGAGGACCTGCATAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GMSGIGRQECLLFYTFLDWSAVS*RTCIIK Trigger: TTTGATTATGCAGGTCCTTCAGCTCACTGCAGACCA...GTCAAGAAAAGTATAAAACAACAAGCACTCCTGCCTGCCTATTCCACTCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGGTAGAACTGGCTGAGGGTTaGCTGAAATCAGCGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQHTWITGISGSKHTVVVELAEG*LKSALG Trigger: TCCCAACGCTGATTTCAGGCAACCCTCAGCCAGTTC...TACCACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCGTCCGGTGCTCTATACTTGGTCCTCTTTAAAGACTTGAAAATGTCAAAGGGGGCCTGCGGATTCTaGTGGTTCATTGAAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSGALYLVLFKDLKMSKGACGF*WFIETL Trigger: CAATGTTTCAATGAACCAGCAGAATCCGCAGGCCCC...CTTTGACATTTTCAAGTCTTTAAAGAGGACCAAGTATAGAGCACCGGACGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | ACCAAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGATTCCAACTTGGGCTTaGATAACTCCTGCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKQHTWITGISGSKHTVVIPTWA*ITPAGA Trigger: AGCCCCTGCAGGAGTTATGCAAGCCCAAGTTGGAAT...CACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATACTGGTCCAGCTCCTTaGATTCCAACTTGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKEETNCSSRINADCLFYTGPAP*IPTWAC Trigger: GCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGT...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTACAGCTGCTCTGGGGTCTTaGATTGGCACTTGTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSYSIRNHPLNVTLFPTAALGS*IGTCPR Trigger: ACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGC...TGTAGGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR GCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATTGCATGCCTGCTCCCTaGATGACTGGTACCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYCMPAP*MTGTCL Trigger: CAGACAGGTACCAGTCATGCAGGGAGCAGGCATGCA...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGGGCTGGAACTCCACCTaGCATAGAAGCTTGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKQHTWITGISGSKHTVVGWNST*HRSLHH Trigger: ATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCC...CACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TTTAATATATTTCCTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTCTTGTCCTCGTTCCATaGGCACTGGTCCAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FNIFPQVVGTHPQIFIATLVLVP*ALVQLL Trigger: AAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAG...AGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAGGAAATATATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACTCCACACTTCACTGTACTCAGGCAGTTGACCTCATACATTTAGCAGAAGGGCTTCCAGTCCTCTaGCATCTAGTCCTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KNSTLHCTQAVDLIHLAEGLPVL*HLVLLL Trigger: AAGCAAGAGGACTAGATGCCAGAGGACTGGAAGCCC...TTCTGCTAAATGTATGAGGTCAACTGCCTGAGTACAGTGAAGTGTGGAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTAATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCAGGTACTGGGCCTCTaGTGTCCATGCCTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLNQWFSTFLMLQPFNIFQVLGL*CPCLWP Trigger: AGGCCAGAGGCATGGACACCAGAGGCCCAGTACCTG...AAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATTAAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCAAAGATACATATATTCTATGCCCCCAACCAACTAGAGATGATAAATGAGACCTGTCTGGATCCCTaGGGAACAACTGCCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LAKIHIFYAPNQLEMINETCLDP*GTTAPM Trigger: CATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGT...CTCATTTATCATCTCTAGTTGGTTGGGGGCATAGAATATATGTATCTTTGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| 3UTR CAA 72 bp | ACGACAATCTTTTGCAAACCAGTGCCACGACAGCCTTaGTCCTATGTATGTTCACACCTGCTACTGACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTIFCKPVPRQP*SYVCSHLLLTK Trigger: TTTGGTCAGTAGCAGGTGTGAACATACATAGGACAAAGGCTGTCGTGGCACTGGTTTGCAAAAGATTGTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CAA 72 bp | CAACCAACCACTGATGAGTGTTTCCATAGTGATGAATaGGGATGCCACTGCTCTTGTCAACTTAGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPTTDECFHSDE*GCHCSCQLSHL Trigger: CAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGTGGTTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | TTTAATATATTTCCTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTGAAGTGCTCTCCCGCTaGATTCACGCCCATTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FNIFPQVVGTHPQIFIATEVLSR*IHAHSS Trigger: ACTTGAATGGGCGTGAATTCAGCGGGAGAGCACTTC...AGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAGGAAATATATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR TCA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATGCTTTCTCCATAAGGTaGCTCTATGACAGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DKEETNCSSRINADCLFYAFSIR*LYDRCT Trigger: GGTGCACCTGTCATAGAGTCACCTTATGGAGAAAGC...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR TCA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATGCCAGCTGTGGATTCTaGAGCAACATGTTTCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DKEETNCSSRINADCLFYASCGF*SNMFRA Trigger: AGCACGAAACATGTTGCTTCAGAATCCACAGCTGGC...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR TCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATAAAGCAGCCTTCTCATaGTCCTGGGGTGTGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYKAAFS*SWGVTW Trigger: CCAAGTCACACCCCAGGATCATGAGAAGGCTGCTTT...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCGTCCGGTGCTCTATACTTGGTCCTCTTTAAAGACTTGAAAATGTCAAAGATTATCCACTCGAAGTaGTCTCCCGCTGAATTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LPSGALYLVLFKDLKMSKIIHSK*SPAEFT Trigger: CGTGAATTCAGCGGGAGAGCACTTCGAGTGGATAAT...CTTTGACATTTTCAAGTCTTTAAAGAGGACCAAGTATAGAGCACCGGACGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCATATTTGTCTGGCGATaGAGAATTTTCAGCGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SDELGCHCSCQLSHLNACIFVWR*RIFSAI Trigger: GATTGCGCTGAAAATTCTGCATCGCCAGACAAATAT...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATGAACTGGCTGAGGGTTaGCTGAAATCAGCGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYELAEG*LKSALG Trigger: TCCCAACGCTGATTTCAGGCAACCCTCAGCCAGTTC...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | TGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTATTTCATTGAACTGGCTGAGGGTTaGCTGAAATCAGCGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CIVFSHEPVGFSFGGYFIELAEG*LKSALG Trigger: TCCCAACGCTGATTTCAGGCAACCCTCAGCCAGTTC...AATGAAATAGCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTGGTCTCTGCATCTAAATACATTGGTGCTTTTAAGTCAAGACAGCTGCCATTGCATCATAGGAGGTaGGCCATTGACATGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLVSASKYIGAFKSRQLPLHHRR*AIDMHS Trigger: GGAATGCATGTCAATGGCGCACCTCCTATGATGCAA...TGGCAGCTGTCTTGACTTAAAAGCACCAATGTATTTAGATGCAGAGACCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTACAACTGGTCCAGCTCCTTaGATTCCAACTTGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSYSIRNHPLNVTLFPTTGPAP*IPTWAC Trigger: GCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGT...TGTAGGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR GCA 90 bp | ATTTTCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTGCTCCTTGCATGCCTaGTCCCTGCATGACTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IFQVLLNQESSTKCHSFSCSLHA*SLHDWY Trigger: GTACCAGTCATGCAGGGAGCAGGCATGCAAGGAGCA...GGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATCATGGCGATCTGGTCTaGAGTGAGCTGAAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDHGDLV*SELKDL Trigger: CAGGTCCTTCAGCTCACTGCAGACCAGATCGCCATG...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGATGTTTCGTGCTTCCTaGGGACTATTCTGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: TKQHTWITGISGSKHTVVMFRAS*GLFWTQ Trigger: CTGTGTCCAGAATAGTCCCCAGGAAGCACGAAACAT...CACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGGTCTCTGCATCTAAATACATTGGTGCTTTTAAGTCAAGACAGCTGCCAATGTTTCGTGCTTCCTaGGGACTATTCTGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVSASKYIGAFKSRQLPMFRAS*GLFWTQ Trigger: CTGTGTCCAGAATAGTCCCCAGGAAGCACGAAACAT...TGGCAGCTGTCTTGACTTAAAAGCACCAATGTATTTAGATGCAGAGACCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATGTTGGGATATTTGTCTaGCGATGCAGAATTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLWGPTHKFSLLLHNWDVGIFV*RCRIFS Trigger: GCTGAAAATTCTGCATCGCCAGACAAATATCCCAAC...ATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAGTTGGGATATTTGTCTaGCGATGCAGAATTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTGGEKPSSSLMPLWENKVGIFV*RCRIFS Trigger: GCTGAAAATTCTGCATCGCCAGACAAATATCCCAAC...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATTTTGCTCCTGTTATGGGCTGGAACTCCACCTaGCATAGAAGCTTGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTHKFSLLLHNWDFAPVMGWNST*HRSLHH Trigger: ATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCC...CATAACAGGAGCAAAATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACCATCTGCACTGGGGCTaGAACTCCACCTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPKFLTRNTLLLVSASKYHLHWG*NSTWHR Trigger: TCTATGCCAGGTGGAGTTCCAGCCCCAGTGCAGATG...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTATTTCATTGGGCTTCCAGTCCTCTaGCATCTAGTCCTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CIVFSHEPVGFSFGGYFIGLPVL*HLVLLL Trigger: AAGCAAGAGGACTAGATGCCAGAGGACTGGAAGCCC...AATGAAATAGCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATTTTGCTCCTGTTATGTGCCCCCATGTTCATTaGATTGGGACCTTGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTHKFSLLLHNWDFAPVMCPHVH*IGTLDS Trigger: GGAATCCAAGGTCCCAATCCAATGAACATGGGGGCA...CATAACAGGAGCAAAATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATTCCTGGGGTGTGACTTaGCTCTGTCCAGGACTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYSWGVT*LCPGLK Trigger: CTTTAGTCCTGGACAGAGCCAAGTCACACCCCAGGA...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATGCTTTCTCCATAAGGTaGCTCTATGACAGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYAFSIR*LYDRCT Trigger: GGTGCACCTGTCATAGAGTCACCTTATGGAGAAAGC...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATTTTGCTCCTGTTATGATTATCCACTCGAAGTaGTCTCCCGCTGAATTCACG | + |
|
Preference number: 4 (lower is better) Translates to: PTHKFSLLLHNWDFAPVMIIHSK*SPAEFT Trigger: CGTGAATTCAGCGGGAGAGCACTTCGAGTGGATAAT...CATAACAGGAGCAAAATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATGGGGCCTGCGGATTCTaGTGGTTCATTGAAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYGACGF*WFIETL Trigger: CAATGTTTCAATGAACCAGCAGAATCCGCAGGCCCC...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATCCTGGCATAGAAGCTTaGATCATAGGAGGTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDPGIEA*IIGGAP Trigger: TGGCGCACCTCCTATGATGCAAGCTTCTATGCCAGG...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | TGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTATTTCATTATTCCAACTTGGGCTTaGATAACTCCTGCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIVFSHEPVGFSFGGYFIIPTWA*ITPAGA Trigger: AGCCCCTGCAGGAGTTATGCAAGCCCAAGTTGGAAT...AATGAAATAGCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | GATCTTAATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTGCTGCTCTGGGGTCTTaGATTGGCACTTGTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DLNQWFSTFLMLQPFNIFAALGS*IGTCPR Trigger: ACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGC...AAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATTAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | GCAATGTACTACTATGCTTTTTATGCCTTAAGTAGTGATTTTAATTCACCTGCCGGCTTCCACCTTGCATaGTTGCTCCTTGCATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AMYYYAFYALSSDFNSPAGFHLA*LLLACL Trigger: CAGGCATGCAAGGAGCAAGCATGCAAGGTGGAAGCC...GGCAGGTGAATTAAAATCACTACTTAAGGCATAAAAAGCATAGTAGTACATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACTCCACACTTCACTGTACTCAGGCAGTTGACCTCATACATTTAGCAGAACTAAGTGCTGTCTCTTaGTCTTGGTACTCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNSTLHCTQAVDLIHLAELSAVS*SWYSQK Trigger: CTTCTGCGAGTACCAAGACCAAGAGACAGCACTTAG...TTCTGCTAAATGTATGAGGTCAACTGCCTGAGTACAGTGAAGTGTGGAGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR CCA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATCTAAGTGCTGTCTCTTaGTCTTGGTACTCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DKEETNCSSRINADCLFYLSAVS*SWYSQK Trigger: CTTCTGCGAGTACCAAGACCAAGAGACAGCACTTAG...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATCCTTGCATTCCAACTTaGGCTTGCATAACTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DKEETNCSSRINADCLFYPCIPT*ACITPA Trigger: TGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGG...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATCTAAAGCCACCAGGCTaGCTTCCACCTTGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDLKPPG*LPPCML Trigger: AAGCATGCAAGGTGGAAGCCAGCCTGGTGGCTTTAG...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CAA 72 bp | TGTATGTTCACACCTGCTACTGACCAAACAACACACTaGGATAACTGGCATTTCTGGAAGCAAACACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CMFTPATDQTTH*DNWHFWKQTHC Trigger: ACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGTCAGTAGCAGGTGTGAACATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CAA 72 bp | ACCATAACGGGCAGTTTGCCGTCCGGTGCTCTATACTaGGTCCTCTTTAAAGACTTGAAAATGTCAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TITGSLPSGALY*VLFKDLKMSKF Trigger: AAACTTTGACATTTTCAAGTCTTTAAAGAGGACCAAGTATAGAGCACCGGACGGCAAACTGCCCGTTATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCAAAGATACATATATTCTATGCCCCCAACCAACTAGAGATGATAAATGAGTGGCTGAGGGTTGCCTaGAATCAGCGTTGGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: LAKIHIFYAPNQLEMINEWLRVA*NQRWDI Trigger: AATATCCCAACGCTGATTTCAGGCAACCCTCAGCCA...CTCATTTATCATCTCTAGTTGGTTGGGGGCATAGAATATATGTATCTTTGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | TGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTATTTCATTTTGCATCATAGGAGGTaGGCCATTGACATGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIVFSHEPVGFSFGGYFILHHRR*AIDMHS Trigger: GGAATGCATGTCAATGGCGCACCTCCTATGATGCAA...AATGAAATAGCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | AATGAGGAAATGACTACTACAAAGCATCCCATAGGCACAACTGGAGCAAACCAAAAACATCTGTTCTGGTaGAAGACTGGCAACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NEEMTTTKHPIGTTGANQKHLFW*KTGNCF Trigger: AAAGCAGTTGCCAGTCTTCCACCAGAACAGATGTTT...TTGGTTTGCTCCAGTTGTGCCTATGGGATGCTTTGTAGTAGTCATTTCCTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CCA 90 bp | ACTGATGAGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTGTTGGGATATTTGTCTaGCGATGCAGAATTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDECFHSDELGCHCSCQLVGIFV*RCRIFS Trigger: GCTGAAAATTCTGCATCGCCAGACAAATATCCCAAC...AAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACTCATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATGGCTGGAACTCCACCTaGCATAGAAGCTTGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDGWNST*HRSLHH Trigger: ATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCC...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTACACCTTGCATTCCAACTTaGGCTTGCATAACTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSYSIRNHPLNVTLFPTPCIPT*ACITPA Trigger: TGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGG...TGTAGGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTAATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCCCTCTGATCTAGCATaGGTCCTCTTGGTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLNQWFSTFLMLQPFNIFPSDLA*VLLVLP Trigger: TGGCAGAACCAAGAGGACCCATGCTAGATCAGAGGG...AAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATTAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATAAGCAACATGTTTCGTaGTTCCTGGGGACTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYKQHVS*FLGTIL Trigger: CAGAATAGTCCCCAGGAAGCACGAAACATGTTGCTT...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | AATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCCTCAGAAGCAACATGTTTCGTaGTTCCTGGGGACTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NQWFSTFLMLQPFNIFPQKQHVS*FLGTIL Trigger: CAGAATAGTCCCCAGGAAGCACGAAACATGTTGCTT...CTGAGGAAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCGTCCGGTGCTCTATACTTGGTCCTCTTTAAAGACTTGAAAATGTCAAAGATATTTGTCTGGCGATaGAGAATTTTCAGCGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LPSGALYLVLFKDLKMSKIFVWR*RIFSAI Trigger: GATTGCGCTGAAAATTCTGCATCGCCAGACAAATAT...CTTTGACATTTTCAAGTCTTTAAAGAGGACCAAGTATAGAGCACCGGACGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTCCAGGTCTTACTCAATCAGGAATCATCCACTAAATGTCACTCTTTTTCCTTGCATCATAGGAGGTaGGCCATTGACATGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFQVLLNQESSTKCHSFSLHHRR*AIDMHS Trigger: GGAATGCATGTCAATGGCGCACCTCCTATGATGCAA...GGAAAAAGAGTGACATTTAGTGGATGATTCCTGATTGAGTAAGACCTGGAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR CCA 90 bp | CTTGCAAAGATACATATATTCTATGCCCCCAACCAACTAGAGATGATAAATGAGATGTTTCGTGCTTCCTaGGGACTATTCTGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: LAKIHIFYAPNQLEMINEMFRAS*GLFWTQ Trigger: CTGTGTCCAGAATAGTCCCCAGGAAGCACGAAACAT...CTCATTTATCATCTCTAGTTGGTTGGGGGCATAGAATATATGTATCTTTGCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | GCAATGTACTACTATGCTTTTTATGCCTTAAGTAGTGATTTTAATTCACCTGCCATTATCCACTCGAAGTaGTCTCCCGCTGAATTCACG | + |
|
Preference number: 4 (lower is better) Translates to: AMYYYAFYALSSDFNSPAIIHSK*SPAEFT Trigger: CGTGAATTCAGCGGGAGAGCACTTCGAGTGGATAAT...GGCAGGTGAATTAAAATCACTACTTAAGGCATAAAAAGCATAGTAGTACATTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATATATTTGTCTGGCGATaGAGAATTTTCAGCGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: DKEETNCSSRINADCLFYIFVWR*RIFSAI Trigger: GATTGCGCTGAAAATTCTGCATCGCCAGACAAATAT...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR GCA 90 bp | GCAATGTACTACTATGCTTTTTATGCCTTAAGTAGTGATTTTAATTCACCTGCCTGGAAGACTGGCAACTaGTTTGCTAATGGATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMYYYAFYALSSDFNSPAWKTGN*FANGFR Trigger: CCTGAATCCATTAGCAAAGCAGTTGCCAGTCTTCCA...GGCAGGTGAATTAAAATCACTACTTAAGGCATAAAAAGCATAGTAGTACATTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR GCA 90 bp | GATCTTAATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTTGGAAGACTGGCAACTaGTTTGCTAATGGATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLNQWFSTFLMLQPFNIFWKTGN*FANGFR Trigger: CCTGAATCCATTAGCAAAGCAGTTGCCAGTCTTCCA...AAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATTAAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| 3UTR CAA 72 bp | GAAATACTTTGCTCTTGGTCTCTGCATCTAAATACATaGGTGCTTTTAAGTCAAGACAGCTGCCAAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: EILCSWSLHLNT*VLLSQDSCQNQ Trigger: TTGGTTTTGGCAGCTGTCTTGACTTAAAAGCACCAATGTATTTAGATGCAGAGACCAAGAGCAAAGTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CAA 72 bp | ACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTaGATTTGGAACTGGTTGTGTAAAACCCAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTVSQITSASLI*IWNWLCKTQVP Trigger: AGGAACTTGGGTTTTACACAACCAGTTCCAAATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CAA 72 bp | GTAAAACCCAAGTTCCTAACTAGAAATACTTTGCTCTaGGTCTCTGCATCTAAATACATTGGTGCTTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKPKFLTRNTLL*VSASKYIGAFK Trigger: CTTAAAAGCACCAATGTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| 3UTR CAA 72 bp | AGAAATGAAAAGATGAAGGCATCAACATATAGAACCTaGCAAAGATACATATATTCTATGCCCCCAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RNEKMKASTYRT*QRYIYSMPPTN Trigger: GTTGGTTGGGGGCATAGAATATATGTATCTTTGCAAGGTTCTATATGTTGATGCCTTCATCTTTTCATTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS GCA 90 bp | ACGTTGGTAGGCAAGGCTCCCCGCTGCATAGCTGCTCTGGGGTCTTaGATTGGCACTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TLVGKAPRCIAALGS*IGTCPRSMGTGPAP Trigger: AGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCCTACCAACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS GCA 90 bp | ACGAGGAGTTGGGACGTTGGTAGGCAAGGCTCCCCGCTGCATAGCTaGTCTGGGGTCTTGCATTGGCACTTGTCCTCGTTCCATGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TRSWDVGRQGSPLHS*SGVLHWHLSSFHGH Trigger: GTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCCTACCAACGTCCCAACTCCTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS CCA 90 bp | GGTAGGCAAGGCTCCCCGCTGCATAGCTGCTCTGGGGTCTTGCATTaGCACTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRQGSPLHSCSGVLH*HLSSFHGHWSSSLH Trigger: ATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS GCA 90 bp | CGTTCCATGGGCACTGGTCCAGCTCCTTGCATTCCAACTTGGGCTTaGATAACTCCTGCAGGGGCTAAGGAACCAGGGCCAGGTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSMGTGPAPCIPTWA*ITPAGAKEPGPGPP Trigger: AGGAGGACCTGGCCCTGGTTCCTTAGCCCCTGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000136510.3 ENSMUST00000156778.8 |
||
| CDS CCA 90 bp | TGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTTGCATTCCAACTTaGGCTTGCATAACTCCTGCAGGGGCTAAGGAACCAGGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPRSMGTGPAPCIPT*ACITPAGAKEPGPG Trigger: ACCTGGCCCTGGTTCCTTAGCCCCTGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000136510.3 ENSMUST00000156778.8 |
||
| CDS CCA 90 bp | CTCTTCCACCTCTGGCATCCAGAGGTGGGCCCCTCTGATCTAGCATaGGTCCTCTTGGTTCTGCCATTAAAGGTCTCGGCTCAGCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFHLWHPEVGPSDLA*VLLVLPLKVSAQLG Trigger: CCCTAGCTGAGCCGAGACCTTTAATGGCAGAACCAAGAGGACCCATGCTAGATCAGAGGGGCCCACCTCTGGATGCCAGAGGTGGAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
||
| CDS CCA 90 bp | TCCTCCTACAGCAGCTGCCATCTGCACTGGGGCTGGAACTCCACCTaGCATAGAAGCTTGCATCATAGGAGGTGCGCCATTGACATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSYSSCHLHWGWNST*HRSLHHRRCAIDMH Trigger: ATGCATGTCAATGGCGCACCTCCTATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCCCCAGTGCAGATGGCAGCTGCTGTAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000136510.3 ENSMUST00000156778.8 |
||
| CDS CCA 90 bp | TGCTCTGGGGTCTTGCATTGGCACTTGTCCTCGTTCCATGGGCACTaGTCCAGCTCCTTGCATTCCAACTTGGGCTTGCATAACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSGVLHWHLSSFHGH*SSSLHSNLGLHNSC Trigger: GCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS CCA 90 bp | GATCCCTGGGGAACAACTGCCCCCATGTTCATTGGATTGGGACCTTaGATTCCACTAGGCATAGGTCCTCTAGGTCCAGGTACTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DPWGTTAPMFIGLGP*IPLGIGPLGPGTGP Trigger: AGGCCCAGTACCTGGACCTAGAGGACCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
||
| CDS GCA 90 bp | GCTGCCATCTGCACTGGGGCTGGAACTCCACCTGGCATAGAAGCTTaGATCATAGGAGGTGCGCCATTGACATGCATTCCACCCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: AAICTGAGTPPGIEA*IIGGAPLTCIPPKD Trigger: ATCTTTGGGTGGAATGCATGTCAATGGCGCACCTCCTATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCCCCAGTGCAGATGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000156778.8 |
||
| CDS GCA 90 bp | TGCATTGGCACTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTTaGATTCCAACTTGGGCTTGCATAACTCCTGCAGGGGCTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CIGTCPRSMGTGPAP*IPTWACITPAGAKE Trigger: TTCCTTAGCCCCTGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS GCA 90 bp | TGCTCCCTGCATGACTGGTACCTGTCTGGATCCCTGGGGAACAACTaGCCCCATGTTCATTGGATTGGGACCTTGGATTCCACTAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSLHDWYLSGSLGNN*PHVHWIGTLDSTRH Trigger: ATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGTACCAGTCATGCAGGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS CCA 90 bp | TGGTACCTGTCTGGATCCCTGGGGAACAACTGCCCCCATGTTCATTaGATTGGGACCTTGGATTCCACTAGGCATAGGTCCTCTAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WYLSGSLGNNCPHVH*IGTLDSTRHRSSRS Trigger: GGACCTAGAGGACCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGTACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCGCCATCTGCCTCATCCGGGGAGGTTCGGATGCAGACGTCATTATGTTTTTGGTTCATTGAAACATaGGGTCCTGAGCCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAPSASSGEVRMQTSLCFWFIET*GPEPGP Trigger: TGGGCCTGGCTCAGGACCCAATGTTTCAATGAACCA...AAAACATAATGACGTCTGCATCCGAACCTCCCCGGATGAGGCAGATGGCGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS GCA 90 bp | TGTAAGGTTCCTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTTaGATTCCAACTTGGGCTTGCATAACTCCTGCAGGGGCTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CKVPCPRSMGTGPAP*IPTWACITPAGAKE Trigger: TTCCTTAGCCCCTGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGGAACCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136510.3 ENSMUST00000156778.8 |
||
| CDS CCA 90 bp | CATTACCTGTCTGGATCCCTGGGGAACAACTGCCCCCATGTTCATTaGATTGGGACCTTGGATTCCACTAGGCATAGGTCCTCTAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HYLSGSLGNNCPHVH*IGTLDSTRHRSSRS Trigger: GGACCTAGAGGACCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGTAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCCTCTGGGGTCTTGCATaGGCACTTGTCCTCGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SDELGCHCSCQLSHLNACLWGLA*ALVLVP Trigger: TGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAG...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCACTGCCCCCATGTTCATaGGATTGGGACCTTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: WWRETKFLLNATVGEQKALPPCS*DWDLGF Trigger: GAATCCAAGGTCCCAATCCAATGAACATGGGGGCAG...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCATCCTGGGGTGTGACTaGGCTCTGTCCAGGACTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SDELGCHCSCQLSHLNACILGCD*ALSRTK Trigger: TTTAGTCCTGGACAGAGCCAAGTCACACCCCAGGAT...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGTTTGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTGGTTCATTGAAACATaGGGTCCTGAGCCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPVCIVFSHEPVGFSFGGWFIET*GPEPGP Trigger: TGGGCCTGGCTCAGGACCCAATGTTTCAATGAACCA...GCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACAAACAGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | GGCATGAGTGGAATAGGCAGGCAGGAGTGCTTGTTGTTTTATACTTTTCTTGACCACTGGTCCAGCTCCTaGCATTCCAACTTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GMSGIGRQECLLFYTFLDHWSSS*HSNLGL Trigger: CAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTG...GTCAAGAAAAGTATAAAACAACAAGCACTCCTGCCTGCCTATTCCACTCATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | TCAAATGCTGTAATCAGGGTCACACATTGGAATCACCTGGTAGAGGTTTTCAACAGCTGCTCTGGGGTCTaGCATTGGCACTTGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SNAVIRVTHWNHLVEVFNSCSGV*HWHLSS Trigger: CGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCT...GTTGAAAACCTCTACCAGGTGATTCCAATGTGTGACCCTGATTACAGCATTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCCTAGCATGGGTCCTCTaGGTTCTGCCATTAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SDELGCHCSCQLSHLNACLAWVL*VLPLKV Trigger: GACCTTTAATGGCAGAACCAAGAGGACCCATGCTAG...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAAGGCACATTGGATTGGGACCTaGGATTCCACTAGGCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: WWRETKFLLNATVGEQKAHWIGT*DSTRHR Trigger: CCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATG...TGCCTTTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCTGAATGCCTGCTGCCTGAAATCAGCGTaGGGATATTTGTCTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SDELGCHCSCQLSHLNACCLKSA*GYLSGD Trigger: ATCGCCAGACAAATATCCCAACGCTGATTTCAGGCA...GCAGGCATTCAGGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | TCAAATGCTGTAATCAGGGTCACACATTGGAATCACCTGGTAGAGGTTTTCAACCACTGGTCCAGCTCCTaGCATTCCAACTTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SNAVIRVTHWNHLVEVFNHWSSS*HSNLGL Trigger: CAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTG...GTTGAAAACCTCTACCAGGTGATTCCAATGTGTGACCCTGATTACAGCATTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | AATGAGGAAATGACTACTACAAAGCATCCCATAGGCACAACTGGAGCAAACCAACTCTGGGGTCTTGCATaGGCACTTGTCCTCGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NEEMTTTKHPIGTTGANQLWGLA*ALVLVP Trigger: TGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAG...TTGGTTTGCTCCAGTTGTGCCTATGGGATGCTTTGTAGTAGTCATTTCCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCATCCTGGGGTGTGACTaGGCTCTGTCCAGGACTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVSIVMNWDATALVNLVTILGCD*ALSRTK Trigger: TTTAGTCCTGGACAGAGCCAAGTCACACCCCAGGAT...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAAACTAAGTGCTGTCTCTaGGTCTTGGTACTCGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QTGGEKPSSSLMPLWENKTKCCL*VLVLAE Trigger: TTCTGCGAGTACCAAGACCAAGAGACAGCACTTAGT...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGTTTGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCACTAAGTGCTGTCTCTaGGTCTTGGTACTCGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPVCIVFSHEPVGFSFGGTKCCL*VLVLAE Trigger: TTCTGCGAGTACCAAGACCAAGAGACAGCACTTAGT...GCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACAAACAGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAATCAGCGTTGGGATATTaGTCTGGCGATGCAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: RSNWWRETKFLLNATVGESALGY*SGDAEF Trigger: AAATTCTGCATCGCCAGACAAATATCCCAACGCTGA...TTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGTTTGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTGCCTGAAATCAGCGTaGGGATATTTGTCTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPVCIVFSHEPVGFSFGGCLKSA*GYLSGD Trigger: ATCGCCAGACAAATATCCCAACGCTGATTTCAGGCA...GCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACAAACAGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGGTTGTGGGGACCCACCCACAAATTTTCATTGCTACTTCATAACTGGGATCCCATGTTCATTGGATaGGGACCTTGGATTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: LRLWGPTHKFSLLLHNWDPMFIG*GPWIPL Trigger: TAGTGGAATCCAAGGTCCCAATCCAATGAACATGGG...ATCCCAGTTATGAAGTAGCAATGAAAATTTGTGGGTGGGTCCCCACAACCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | AATGAGGAAATGACTACTACAAAGCATCCCATAGGCACAACTGGAGCAAACCAACTGCCCCCATGTTCATaGGATTGGGACCTTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: NEEMTTTKHPIGTTGANQLPPCS*DWDLGF Trigger: GAATCCAAGGTCCCAATCCAATGAACATGGGGGCAG...TTGGTTTGCTCCAGTTGTGCCTATGGGATGCTTTGTAGTAGTCATTTCCTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | AAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGGTAATTGGGAGCATCACCTaGTCCTCGTTCCATGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KQHTWITGISGSKHTVVVIGSIT*SSFHGH Trigger: GTGCCCATGGAACGAGGACAAGGTGATGCTCCCAAT...TACCACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTGGTGGAGAGAAACCAAGTTCCTCCTTAATGCCACTGTGGGAGAACAAATCAGCGTTGGGATATTaGTCTGGCGATGCAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: QTGGEKPSSSLMPLWENKSALGY*SGDAEF Trigger: AAATTCTGCATCGCCAGACAAATATCCCAACGCTGA...TTTGTTCTCCCACAGTGGCATTAAGGAGGAACTTGGTTTCTCTCCACCAGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | TCAAATGCTGTAATCAGGGTCACACATTGGAATCACCTGGTAGAGGTTTTCAACTCCTTGCATTCCAACTaGGGCTTGCATAACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SNAVIRVTHWNHLVEVFNSLHSN*GLHNSC Trigger: GCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGA...GTTGAAAACCTCTACCAGGTGATTCCAATGTGTGACCCTGATTACAGCATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAACAACACACTTGGATAACTGGCATTTCTGGAAGCAAACACACTGTTGTGTCCTTGCATTCCAACTaGGGCTTGCATAACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TKQHTWITGISGSKHTVVSLHSN*GLHNSC Trigger: GCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGA...CACAACAGTGTGTTTGCTTCCAGAAATGCCAGTTATCCAAGTGTGTTGTTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCGTCCGGTGCTCTATACTTGGTCCTCTTTAAAGACTTGAAAATGTCAAAGCTAGCATGGGTCCTCTaGGTTCTGCCATTAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSGALYLVLFKDLKMSKLAWVL*VLPLKV Trigger: GACCTTTAATGGCAGAACCAAGAGGACCCATGCTAG...CTTTGACATTTTCAAGTCTTTAAAGAGGACCAAGTATAGAGCACCGGACGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCCCCATGTTCATTGGATaGGGACCTTGGATTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: SVSIVMNWDATALVNLVTPMFIG*GPWIPL Trigger: TAGTGGAATCCAAGGTCCCAATCCAATGAACATGGG...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | GCAATGTACTACTATGCTTTTTATGCCTTAAGTAGTGATTTTAATTCACCTGCCAGCTGCTCTGGGGTCTaGCATTGGCACTTGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AMYYYAFYALSSDFNSPASCSGV*HWHLSS Trigger: CGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCT...GGCAGGTGAATTAAAATCACTACTTAAGGCATAAAAAGCATAGTAGTACATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033609.9 |
||
| CDS-3UTR CAA 90 bp | AGGACATGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTGCCCCCATGTTCATaGGATTGGGACCTTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: RTWFLLDNCFPNHFSFTYLPPCS*DWDLGF Trigger: GAATCCAAGGTCCCAATCCAATGAACATGGGGGCAG...ATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCATGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATTGGTTCATTGAAACATaGGGTCCTGAGCCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDWFIET*GPEPGP Trigger: TGGGCCTGGCTCAGGACCCAATGTTTCAATGAACCA...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCCTCAGATAGGAGGTGCGCCATaGACATGCATTCCACCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NQWFSTFLMLQPFNIFPQIGGAP*TCIPPK Trigger: TTTGGGTGGAATGCATGTCAATGGCGCACCTCCTAT...CTGAGGAAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | GCAATGTACTACTATGCTTTTTATGCCTTAAGTAGTGATTTTAATTCACCTGCCCACTGGTCCAGCTCCTaGCATTCCAACTTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AMYYYAFYALSSDFNSPAHWSSS*HSNLGL Trigger: CAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTG...GGCAGGTGAATTAAAATCACTACTTAAGGCATAAAAAGCATAGTAGTACATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | TGTATTGTCTTCTCACATGAACCTGTAGGTTTCAGTTTTGGGGGCTATTTCATTCATTGGATTGGGACCTaGGATTCCACTAGGCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: CIVFSHEPVGFSFGGYFIHWIGT*DSTRHR Trigger: CCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATG...AATGAAATAGCCCCCAAAACTGAAACCTACAGGTTCATGTGAGAAGACAATACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGAAGAGACAAACTGCAGCTCCAGAATAAATGCAGACTGCCTTTTCTATTCAGCGTTGGGATATTaGTCTGGCGATGCAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: DKEETNCSSRINADCLFYSALGY*SGDAEF Trigger: AAATTCTGCATCGCCAGACAAATATCCCAACGCTGA...ATAGAAAAGGCAGTCTGCATTTATTCTGGAGCTGCAGTTTGTCTCTTCTTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATATAGGAGGTGCGCCATaGACATGCATTCCACCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDIGGAP*TCIPPK Trigger: TTTGGGTGGAATGCATGTCAATGGCGCACCTCCTAT...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATTCCTTGCATTCCAACTaGGGCTTGCATAACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDSLHSN*GLHNSC Trigger: GCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGA...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACCATTGGATTGGGACCTaGGATTCCACTAGGCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPKFLTRNTLLLVSASKYHWIGT*DSTRHR Trigger: CCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATG...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTTTCCATAGTGATGAATTGGGATGCCACTGCTCTTGTCAACTTAGTCACCGACACAGAGCTTCATTaGTTTCATCAACTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SVSIVMNWDATALVNLVTDTELH*FHQLKH Trigger: ATGTTTGAGTTGATGAAACAAATGAAGCTCTGTGTC...GGTGACTAAGTTGACAAGAGCAGTGGCATCCCAATTCATCACTATGGAAACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACTGCCTGAAATCAGCGTaGGGATATTTGTCTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: KPKFLTRNTLLLVSASKYCLKSA*GYLSGD Trigger: ATCGCCAGACAAATATCCCAACGCTGATTTCAGGCA...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | GCAATGTACTACTATGCTTTTTATGCCTTAAGTAGTGATTTTAATTCACCTGCCATAGGAGGTGCGCCATaGACATGCATTCCACCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AMYYYAFYALSSDFNSPAIGGAP*TCIPPK Trigger: TTTGGGTGGAATGCATGTCAATGGCGCACCTCCTAT...GGCAGGTGAATTAAAATCACTACTTAAGGCATAAAAAGCATAGTAGTACATTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | GATCTTAATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCTAGCATGGGTCCTCTaGGTTCTGCCATTAAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DLNQWFSTFLMLQPFNIFLAWVL*VLPLKV Trigger: GACCTTTAATGGCAGAACCAAGAGGACCCATGCTAG...AAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATTAAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATCCCATGTTCATTGGATaGGGACCTTGGATTCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDPMFIG*GPWIPL Trigger: TAGTGGAATCCAAGGTCCCAATCCAATGAACATGGG...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTGGATGCTGGACATGTTGCATTCTAGCTTTGATATGTTTTTCCTCCCCAGACACAGAGCTTCATTaGTTTCATCAACTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: RTGCWTCCILALICFSSPDTELH*FHQLKH Trigger: ATGTTTGAGTTGATGAAACAAATGAAGCTCTGTGTC...TGGGGAGGAAAAACATATCAAAGCTAGAATGCAACATGTCCAGCATCCAGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | AATCAGTGGTTCTCAACCTTCCTAATGCTGCAACCCTTTAATATATTTCCTCAGGAAAATGTCCTTCAGTaGTTCTTCAGTAGCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: NQWFSTFLMLQPFNIFPQENVLQ*FFSSFI Trigger: TATGAAGCTACTGAAGAACAACTGAAGGACATTTTC...CTGAGGAAATATATTAAAGGGTTGCAGCATTAGGAAGGTTGAGAACCACTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTTCTACTAGACAACTGTTTCCCAAATCACTTCAGCTTCACTTATCTTGATGAAAATGTCCTTCAGTaGTTCTTCAGTAGCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: WFLLDNCFPNHFSFTYLDENVLQ*FFSSFI Trigger: TATGAAGCTACTGAAGAACAACTGAAGGACATTTTC...ATCAAGATAAGTGAAGCTGAAGTGATTTGGGAAACAGTTGTCTAGTAGAAACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | AAACCCAAGTTCCTAACTAGAAATACTTTGCTCTTGGTCTCTGCATCTAAATACGAAAATGTCCTTCAGTaGTTCTTCAGTAGCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: KPKFLTRNTLLLVSASKYENVLQ*FFSSFI Trigger: TATGAAGCTACTGAAGAACAACTGAAGGACATTTTC...GTATTTAGATGCAGAGACCAAGAGCAAAGTATTTCTAGTTAGGAACTTGGGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS-3UTR CAA 90 bp | GCAATGTACTACTATGCTTTTTATGCCTTAAGTAGTGATTTTAATTCACCTGCCGACACAGAGCTTCATTaGTTTCATCAACTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: AMYYYAFYALSSDFNSPADTELH*FHQLKH Trigger: ATGTTTGAGTTGATGAAACAAATGAAGCTCTGTGTC...GGCAGGTGAATTAAAATCACTACTTAAGGCATAAAAAGCATAGTAGTACATTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
||
| CDS CCA 72 bp | GTACTGGGCCTCTGGTGTCCATGCCTCTGGCCTCCATaGCACGAGCCTCCATGGCACGGGCTTCCATGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VLGLWCPCLWPP*HEPPWHGLPWH Trigger: GTGCCATGGAAGCCCGTGCCATGGAGGCTCGTGCCATGGAGGCCAGAGGCATGGACACCAGAGGCCCAGTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
||
| CDS TCA 72 bp | TCTGGGGTCTTGCATTGGCACTTGAACTCGCTCAATTaGTGCAGGCCCGGCGGGTCCCACGGGCGAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGVLHWHLNSLN*CRPGGSHGRVL Trigger: CAGCACTCGCCCGTGGGACCCGCCGGGCCTGCATCAATTGAGCGAGTTCAAGTGCCAATGCAAGACCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136510.3 |
||
| CDS CCA 72 bp | GGCTCCCCGCTGCATAGCTGCTCTGGGGTCTTGCATTaGCACTTGTCCTCGTTCCATGGGCACTGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSPLHSCSGVLH*HLSSFHGHWSS Trigger: GCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS CAA 72 bp | CTCTGGGGTCTTGCATTGGCACTTGAACTCGCTCAATaGATGCAGGCCCGGCGGGTCCCACGGGCGAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LWGLALALELAQ*MQARRVPRASA Trigger: AGCACTCGCCCGTGGGACCCGCCGGGCCTGCATCAATTGAGCGAGTTCAAGTGCCAATGCAAGACCCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136510.3 |
||
| CDS CAA 90 bp | GACGTTGGTAGGCAAGGCTCCCCGCTGCATAGCTGCTCTGGGGTCTaGCATTGGCACTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DVGRQGSPLHSCSGV*HWHLSSFHGHWSSS Trigger: GGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCCTACCAACGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS GCA 72 bp | GGCAAGGCTCCCCGCTGCATAGCTGCTCTGGGGTCTTaGATTGGCACTTGTCCTCGTTCCATGGGCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GKAPRCIAALGS*IGTCPRSMGTG Trigger: ACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS GCA 72 bp | TCAATTGATGCAGGCCCGGCGGGTCCCACGGGCGAGTaGTGTAAGGTTCCTTGTCCTCGTTCCATGGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: SIDAGPAGPTGE*CKVPCPRSMGT Trigger: AGTGCCCATGGAACGAGGACAAGGAACCTTACAGCACTCGCCCGTGGGACCCGCCGGGCCTGCATCAATTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136510.3 ENSMUST00000156778.8 |
||
| CDS CAA 72 bp | AGGCAAGGCTCCCCGCTGCATAGCTGCTCTGGGGTCTaGCATTGGCACTTGTCCTCGTTCCATGGGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: RQGSPLHSCSGV*HWHLSSFHGHW Trigger: CCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS GCA 72 bp | TGGGACGTTGGTAGGCAAGGCTCCCCGCTGCATAGCTaGTCTGGGGTCTTGCATTGGCACTTGTCCTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WDVGRQGSPLHS*SGVLHWHLSSF Trigger: GAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCCTACCAACGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS GCA 72 bp | CGAGGAGTTGGGACGTTGGTAGGCAAGGCTCCCCGCTaGATAGCTGCTCTGGGGTCTTGCATTGGCACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGVGTLVGKAPR*IAALGSCIGTC Trigger: ACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTGCCTACCAACGTCCCAACTCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS CCA 72 bp | GATTCCACTAGGCATAGGTCCTCTAGGTCCAGGTACTaGGCCTCTGGTGTCCATGCCTCTGGCCTCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: DSTRHRSSRSRY*ASGVHASGLHG Trigger: GCCATGGAGGCCAGAGGCATGGACACCAGAGGCCCAGTACCTGGACCTAGAGGACCTATGCCTAGTGGAATC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
||
| CDS CAA 72 bp | CCGCTGCATAGCTGCTCTGGGGTCTTGCATTGGCACTaGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLHSCSGVLHWH*SSFHGHWSSSL Trigger: CAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS CAA 90 bp | CAAGGCTCCCCGCTGCATAGCTGCTCTGGGGTCTTGCATTGGCACTaGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTTGCATTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: QGSPLHSCSGVLHWH*SSFHGHWSSSLHSN Trigger: GTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAGCAGCTATGCAGCGGGGAGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
||
| CDS CAA 90 bp | CTCTGGCATCCAGAGGTGGGCCCCTCTGATCTAGCATGGGTCCTCTaGGTTCTGCCATTAAAGGTCTCGGCTCAGCTAGGGGTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LWHPEVGPSDLAWVL*VLPLKVSAQLGVLL Trigger: GAGGAGGACCCCTAGCTGAGCCGAGACCTTTAATGGCAGAACCAAGAGGACCCATGCTAGATCAGAGGGGCCCACCTCTGGATGCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000136510.3 |
||
| CDS CCA 72 bp | GCGGGTCATTGGGAGCATCACCTTGTCCTCGTTCCATaGGCACTGGTCCAGCTCCTTGCATTCCAACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGHWEHHLVLVP*ALVQLLAFQLG Trigger: CCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGGTGATGCTCCCAATGACCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113287.8 |
||
| CDS CCA 72 bp | CGGGCGAGTGCTGTAAGGTTCCTTGTCCTCGTTCCATaGGCACTGGTCCAGCTCCTTGCATTCCAACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RASAVRFLVLVP*ALVQLLAFQLG Trigger: CCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGGAACCTTACAGCACTCGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136510.3 ENSMUST00000156778.8 |
||
| CDS CAA 72 bp | GGAGCATCACCTAAAAGACCACGAGGAGTTGGGACGTaGGTAGGCAAGGCTCCCCGCTGCATAGCTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GASPKRPRGVGT*VGKAPRCIAAL Trigger: CAGAGCAGCTATGCAGCGGGGAGCCTTGCCTACCAACGTCCCAACTCCTCGTGGTCTTTTAGGTGATGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000136510.3 |
||
| CDS CAA 72 bp | CCAGAGGTGGGCCCCTCTGATCTAGCATGGGTCCTCTaGGTTCTGCCATTAAAGGTCTCGGCTCAGCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PEVGPSDLAWVL*VLPLKVSAQLG Trigger: CCCTAGCTGAGCCGAGACCTTTAATGGCAGAACCAAGAGGACCCATGCTAGATCAGAGGGGCCCACCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000136510.3 |
||
| CDS CAA 72 bp | ATATCATCCATGTTCTCTGCCCTTGAACTCGCTCAATaGATGCAGGCCCGGCGGGTCCCACGGGCGAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ISSMFSALELAQ*MQARRVPRASA Trigger: AGCACTCGCCCGTGGGACCCGCCGGGCCTGCATCAATTGAGCGAGTTCAAGGGCAGAGAACATGGATGATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156778.8 |
||
| CDS CAA 90 bp | GGATCCCTGGGGAACAACTGCCCCCATGTTCATTGGATTGGGACCTaGGATTCCACTAGGCATAGGTCCTCTAGGTCCAGGTACTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSLGNNCPHVHWIGT*DSTRHRSSRSRYWA Trigger: GGCCCAGTACCTGGACCTAGAGGACCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
||
| CDS GCA 72 bp | CCTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTTaGATTCCAACTTGGGCTTGCATAACTCCTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PCPRSMGTGPAP*IPTWACITPAG Trigger: CCCTGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113287.8 ENSMUST00000136510.3 ENSMUST00000156778.8 |
||
| CDS CCA 72 bp | AGCAGCTGCCATCTGCACTGGGGCTGGAACTCCACCTaGCATAGAAGCTTGCATCATAGGAGGTGCGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SSCHLHWGWNST*HRSLHHRRCAI Trigger: AATGGCGCACCTCCTATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCCCCAGTGCAGATGGCAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000136510.3 ENSMUST00000156778.8 |
||
| CDS CCA 72 bp | AGGTCCTCCTACAGCAGCTGCCATCTGCACTGGGGCTaGAACTCCACCTGGCATAGAAGCTTGCATCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSYSSCHLHWG*NSTWHRSLHHR Trigger: CCTATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCCCCAGTGCAGATGGCAGCTGCTGTAGGAGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000136510.3 ENSMUST00000156778.8 |
||
| CDS CCA 72 bp | CTCTGGGGTCTTGCATTGGCACTTGTCCTCGTTCCATaGGCACTGGTCCAGCTCCTTGCATTCCAACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LWGLALALVLVP*ALVQLLAFQLG Trigger: CCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTGCCAATGCAAGACCCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
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| CDS CCA 72 bp | CTCTGGCATCCAGAGGTGGGCCCCTCTGATCTAGCATaGGTCCTCTTGGTTCTGCCATTAAAGGTCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: LWHPEVGPSDLA*VLLVLPLKVSA Trigger: AGCCGAGACCTTTAATGGCAGAACCAAGAGGACCCATGCTAGATCAGAGGGGCCCACCTCTGGATGCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000136510.3 |
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| CDS CCA 72 bp | CCTGCTCCCTGCATGACTGGTACCTGTCTGGATCCCTaGGGAACAACTGCCCCCATGTTCATTGGATTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PAPCMTGTCLDP*GTTAPMFIGLG Trigger: TCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGTACCAGTCATGCAGGGAGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113287.8 |
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| CDS TCA 72 bp | GCCAGGCCCAGCAACATGAACTGGCTGAGGGTTGCCTaGAATCAGCGTTGGGATATTTGTCTGGCGATGCAG | + |
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Preference number: 6 (lower is better) Translates to: ARPSNMNWLRVA*NQRWDICLAMQ Trigger: CTGCATCGCCAGACAAATATCCCAACGCTGATTTCAGGCAACCCTCAGCCAGTTCATGTTGCTGGGCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000156778.8 |
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| CDS GCA 72 bp | ACTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTTaGATTCCAACTTGGGCTTGCATAACTCCTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TCPRSMGTGPAP*IPTWACITPAG Trigger: CCCTGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
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| CDS CAA 72 bp | CACTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTaGCATTCCAACTTGGGCTTGCATAACTCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HLSSFHGHWSSS*HSNLGLHNSCR Trigger: CCTGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 |
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| CDS CAA 72 bp | ACCTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTaGCATTCCAACTTGGGCTTGCATAACTCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TLSSFHGHWSSS*HSNLGLHNSCR Trigger: CCTGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113287.8 |
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| CDS CAA 72 bp | TCCTTGTCCTCGTTCCATGGGCACTGGTCCAGCTCCTaGCATTCCAACTTGGGCTTGCATAACTCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLSSFHGHWSSS*HSNLGLHNSCR Trigger: CCTGCAGGAGTTATGCAAGCCCAAGTTGGAATGCAAGGAGCTGGACCAGTGCCCATGGAACGAGGACAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136510.3 ENSMUST00000156778.8 |
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| CDS CAA 90 bp | AGCTGCCATCTGCACTGGGGCTGGAACTCCACCTGGCATAGAAGCTaGCATCATAGGAGGTGCGCCATTGACATGCATTCCACCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SCHLHWGWNSTWHRS*HHRRCAIDMHSTQR Trigger: TCTTTGGGTGGAATGCATGTCAATGGCGCACCTCCTATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCCCCAGTGCAGATGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000156778.8 |
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| CDS CAA 90 bp | ACCTGTCTGGATCCCTGGGGAACAACTGCCCCCATGTTCATTGGATaGGGACCTTGGATTCCACTAGGCATAGGTCCTCTAGGTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: TCLDPWGTTAPMFIG*GPWIPLGIGPLGPG Trigger: ACCTGGACCTAGAGGACCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
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| CDS TCA 72 bp | AGGGGCATCCTCAGGGCTGATGCTTTCTCCATAAGGTaGCTCTATGACAGGTGCACCAGTGCCAAGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RGILRADAFSIR*LYDRCTSAKAL Trigger: AAGAGCCTTGGCACTGGTGCACCTGTCATAGAGTCACCTTATGGAGAAAGCATCAGCCCTGAGGATGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000144483.2 |
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| CDS TCA 72 bp | TCTCTTCCACCTCTGGCATCCAGAGGTGGGCCCCTCTaGTCTAGCATGGGTCCTCTTGGTTCTGCCATTAAA | + |
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Preference number: 6 (lower is better) Translates to: SLPPLASRGGPL*SSMGPLGSAIK Trigger: TTTAATGGCAGAACCAAGAGGACCCATGCTAGATCAGAGGGGCCCACCTCTGGATGCCAGAGGTGGAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
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| CDS GCA 72 bp | CTGAGCCAGGCCCAGCAACATGAACTGGCTGAGGGTTaGCTGAAATCAGCGTTGGGATATTTGTCTGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: LSQAQQHELAEG*LKSALGYLSGD Trigger: ATCGCCAGACAAATATCCCAACGCTGATTTCAGGCAACCCTCAGCCAGTTCATGTTGCTGGGCCTGGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000156778.8 |
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| CDS GCA 72 bp | TGCACTGGGGCTGGAACTCCACCTGGCATAGAAGCTTaGATCATAGGAGGTGCGCCATTGACATGCATTCCA | + |
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Preference number: 6 (lower is better) Translates to: CTGAGTPPGIEA*IIGGAPLTCIP Trigger: TGGAATGCATGTCAATGGCGCACCTCCTATGATGCAAGCTTCTATGCCAGGTGGAGTTCCAGCCCCAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 ENSMUST00000136510.3 ENSMUST00000156778.8 |
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| CDS CCA 72 bp | TCTGGATCCCTGGGGAACAACTGCCCCCATGTTCATTaGATTGGGACCTTGGATTCCACTAGGCATAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SGSLGNNCPHVH*IGTLDSTRHRS Trigger: GGACCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
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| CDS CAA 72 bp | CCAGTTACAGTCATTAAAGTGCCTCCCCGCGGGTCATaGGGAGCATCACCTAAAAGACCACGAGGAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PVTVIKVPPRGS*GASPKRPRGVG Trigger: CCCAACTCCTCGTGGTCTTTTAGGTGATGCTCCCAATGACCCGCGGGGAGGCACTTTAATGACTGTAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000136510.3 |
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| CDS CAA 72 bp | GGGAACAACTGCCCCCATGTTCATTGGATTGGGACCTaGGATTCCACTAGGCATAGGTCCTCTAGGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GNNCPHVHWIGT*DSTRHRSSRSR Trigger: CCTGGACCTAGAGGACCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
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| CDS CCA 72 bp | CAGTTACAGTCATTAAAGTGCCTCCCCGCGGGTCATTaGGAGCATCACCTAAAAGACCACGAGGAGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QLQSLKCLPAGH*EHHLKDHEELG Trigger: TCCCAACTCCTCGTGGTCTTTTAGGTGATGCTCCCAATGACCCGCGGGGAGGCACTTTAATGACTGTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000136510.3 |
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| CDS CCA 72 bp | GGAACAACTGCCCCCATGTTCATTGGATTGGGACCTTaGATTCCACTAGGCATAGGTCCTCTAGGTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GTTAPMFIGLGP*IPLGIGPLGPG Trigger: ACCTGGACCTAGAGGACCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
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| CDS CAA 72 bp | GATCCCTGGGGAACAACTGCCCCCATGTTCATTGGATaGGGACCTTGGATTCCACTAGGCATAGGTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: DPWGTTAPMFIG*GPWIPLGIGPL Trigger: TAGAGGACCTATGCCTAGTGGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000113287.8 |
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| CDS CAA 72 bp | CCAGTTACAGTCATTAAAGTGCCTCCCCGCGGGTCATaGGGAGCATCACAGACTGCAATTCCATCCAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PVTVIKVPPRGS*GASQTAIPSKP Trigger: AGGCTTGGATGGAATTGCAGTCTGTGATGCTCCCAATGACCCGCGGGGAGGCACTTTAATGACTGTAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156778.8 |
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| CDS CAA 90 bp | TCTACGTCTCCAGTTACAGTCATTAAAGTGCCTCCCCGCGGGTCATaGGGAGCATCACCTAAAAGACCACGAGGAGTTGGGACGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: STSPVTVIKVPPRGS*GASPKRPRGVGTLV Trigger: TACCAACGTCCCAACTCCTCGTGGTCTTTTAGGTGATGCTCCCAATGACCCGCGGGGAGGCACTTTAATGACTGTAACTGGAGACGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033609.9 ENSMUST00000113286.8 ENSMUST00000136510.3 |
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| CDS GCA 72 bp | TACAAGCATTACCTGTCTGGATCCCTGGGGAACAACTaGCCCCATGTTCATTGGATTGGGACCTTGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: YKHYLSGSLGNN*PHVHWIGTLDS Trigger: GGAATCCAAGGTCCCAATCCAATGAACATGGGGGCAGTTGTTCCCCAGGGATCCAGACAGGTAATGCTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113286.8 |
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