Pregenerated sensors for CSTF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027498Ensembl transcript IDs: ENSMUST00000116375.2, ENSMUST00000151511.8
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGATCCAAGGCAGGAGCCAGGCGGCCACACCCCCGCCACAGATaGTGCAAGCTGCTCACTTCCGCAGCCGGTGAGGACACAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: HRSKAGARRPHPRHR*CKLLTSAAGEDTGR Trigger: CCTCCCTGTGTCCTCACCGGCTGCGGAAGTGAGCAGCTTGCACCATCTGTGGCGGGGGTGTGGCCGCCTGGCTCCTGCCTTGGATCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 90 bp | TCCCAAGTGACCGCAGCACCCTGGAACCTCTCGCTGGCGTGCGGGTaGCAACACAGGTGTCAAGTCTGCTGTGCCACAGCCAGAAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: SQVTAAPWNLSLACG*QHRCQVCCATARKH Trigger: GTGCTTTCTGGCTGTGGCACAGCAGACTTGACACCTGTGTTGCCACCCGCACGCCAGCGAGAGGTTCCAGGGTGCTGCGGTCACTTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 90 bp | GCCCGGAGGCTGCATTATTTTAATTCCCAAGTGACCGCAGCACCCTaGAACCTCTCGCTGGCGTGCGGGTGGCAACACAGGTGTCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: ARRLHYFNSQVTAAP*NLSLACGWQHRCQV Trigger: GACTTGACACCTGTGTTGCCACCCGCACGCCAGCGAGAGGTTCCAGGGTGCTGCGGTCACTTGGGAATTAAAATAATGCAGCCTCCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR TCA 90 bp | GTGGAAGACAGGAGGGGGCGGGGGCTAGAAAGCCTCCGTTTGACGTaGAGAAGGAGGAACAGTGAGGTTGTAGATCTGAGCTTTATTACC | + |
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Preference number: 1 (lower is better) Translates to: VEDRRGRGLESLRLT*RRRNSEVVDLSFIT Trigger: GGTAATAAAGCTCAGATCTACAACCTCACTGTTCCTCCTTCTTCACGTCAAACGGAGGCTTTCTAGCCCCCGCCCCCTCCTGTCTTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 90 bp | GACAAGGTTTCACTCTATAGCTCTGGCTGCCCTAGAACTCATGTTTaGACCAGGCTAGGATCTCACAGAGATCCACCTGCCTCTGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: DKVSLYSSGCPRTHV*TRLGSHRDPPASGS Trigger: GGAGCCAGAGGCAGGTGGATCTCTGTGAGATCCTAGCCTGGTCCAAACATGAGTTCTAGGGCAGCCAGAGCTATAGAGTGAAACCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR GCA 90 bp | CTGTCATTGCTTAGTCGGTGGCCTTACACTGTTTCTAGATACTTCTaGCCAGGTCCTGAGGGCCTCTTCTTCAGGAGCGACAGAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LSLLSRWPYTVSRYF*PGPEGLFFRSDRKQ Trigger: CTGCTTTCTGTCGCTCCTGAAGAAGAGGCCCTCAGGACCTGGGCAGAAGTATCTAGAAACAGTGTAAGGCCACCGACTAAGCAATGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR GCA 90 bp | ACACCGGACAGAACACGCAAGATCAAAGTGTCCGTTACTACTTCCTaGGGACAGAAACGGCTCTTTAGGACAACACCACAAACCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TPDRTRKIKVSVTTS*GQKRLFRTTPQTQG Trigger: TCCCTGGGTTTGTGGTGTTGTCCTAAAGAGCCGTTTCTGTCCGCAGGAAGTAGTAACGGACACTTTGATCTTGCGTGTTCTGTCCGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 90 bp | AGATCTGAGCTTTATTACCAGGACAATGTCACCTCAGGATGGGACTaGGATCCCTGCAAGATGGTTCTACATGGAACCCGGCTCCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: RSELYYQDNVTSGWD*DPCKMVLHGTRLLR Trigger: TCTGAGGAGCCGGGTTCCATGTAGAACCATCTTGCAGGGATCCCAGTCCCATCCTGAGGTGACATTGTCCTGGTAATAAAGCTCAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 90 bp | AGAAACGGCTCTTTAGGACAACACCACAAACCCAGGGATCCCCAGTaGGGAGGAGGGAACAGATCTTTTATGTCAAAGTTCTCACAACTC | + |
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Preference number: 1 (lower is better) Translates to: RNGSLGQHHKPRDPQ*GGGNRSFMSKFSQL Trigger: GAGTTGTGAGAACTTTGACATAAAAGATCTGTTCCCTCCTCCCCACTGGGGATCCCTGGGTTTGTGGTGTTGTCCTAAAGAGCCGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCATCCTGCACCTGTCAGCCCTCAAACTACTGGCACCGAGGCAGGCCCGGAGTCCTTCTCCAGGAATaGGAGCTGAAGGCTGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: SSSCTCQPSNYWHRGRPGVLLQE*ELKAVP Trigger: TGGCACAGCCTTCAGCTCTCATTCCTGGAGAAGGAC...TCCGGGCCTGCCTCGGTGCCAGTAGTTTGAGGGCTGACAGGTGCAGGATGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGGCCCGGAGGCTGCATTATTTTAATTCCCAAGTGACCGCAGCACCCTGGCTGTATCAGCTGGAGTaGTGCAGCGCCTCCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RQARRLHYFNSQVTAAPWLYQLE*CSASQE Trigger: CTCCTGGGAGGCGCTGCAGCACTCCAGCTGATACAG...CCAGGGTGCTGCGGTCACTTGGGAATTAAAATAATGCAGCCTCCGGGCCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCATCCTGCACCTGTCAGCCCTCAAACTACTGGCACCGAGGCAGGCCCGGAGCACAGGTGTCAAGTCTaGTGTGCCACAGCCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LHPAPVSPQTTGTEAGPEHRCQV*CATARK Trigger: CTTTCTGGCTGTGGCACAGCAGACTTGACACCTGTG...CTCCGGGCCTGCCTCGGTGCCAGTAGTTTGAGGGCTGACAGGTGCAGGATGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CAA 90 bp | TGGGCTTGCAGGCTAGTCACCATTCCTAACAGAAGCACTGCACTGTaGGTACCGAGAAGGGTGGAAGACAGGAGGGGGCGGGGGCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: WACRLVTIPNRSTAL*VPRRVEDRRGRGLE Trigger: TTCTAGCCCCCGCCCCCTCCTGTCTTCCACCCTTCTCGGTACCAACAGTGCAGTGCTTCTGTTAGGAATGGTGACTAGCCTGCAAGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCCAGGTCCTGAGGGCCTCTTCTTCAGGAGCGACAGAAAGCAGACTGTGTTCCAGGAATGAGAGCTaGAGGCTGTGCCAAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SAQVLRASSSGATESRLCSRNES*RLCQVL Trigger: CAGGACTTGGCACAGCCTTCAGCTCTCATTCCTGGA...ACACAGTCTGCTTTCTGTCGCTCCTGAAGAAGAGGCCCTCAGGACCTGGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTGCCACAGCCAGAAAGCACCAGGGACGCCAGAGGAACAAAGCTTGCCTAAGCCTCCGTTTGACGTaGAGAAGGAGGAACAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: CCATARKHQGRQRNKACLSLRLT*RRRNSE Trigger: CTCACTGTTCCTCCTTCTTCACGTCAAACGGAGGCT...TAGGCAAGCTTTGTTCCTCTGGCGTCCCTGGTGCTTTCTGGCTGTGGCACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTGCAGGCTAGTCACCATTACCTCAGGATGGGACTaGGATCCCTGCAAGATGGTT | + |
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Preference number: 2 (lower is better) Translates to: GLRLLILLLYWACRLVTITSGWD*DPCKMV Trigger: AACCATCTTGCAGGGATCCCAGTCCCATCCTGAGGT...AATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGGCCTGTCATTGCTTAGTCGGTGGCCTTACACTGTTTCTAGATACTTCTAGGAGGGCAGAGTCCTaGGACAAGAACCCTAGGATG | + |
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Preference number: 2 (lower is better) Translates to: PGACHCLVGGLTLFLDTSRRAES*DKNPRM Trigger: CATCCTAGGGTTCTTGTCTCAGGACTCTGCCCTCCT...AGAAGTATCTAGAAACAGTGTAAGGCCACCGACTAAGCAATGACAGGCCCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR TCA 90 bp | CTAACAGAAGCACTGCACTGTTGGTACCGAGAAGGGTGGAAGACAGGAGGGGGCAAGAAGGAGGAACAGTaGGGTTGTAGATCTGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: LTEALHCWYREGWKTGGGKKEEQ*GCRSEL Trigger: AAGCTCAGATCTACAACCTCACTGTTCCTCCTTCTT...GCCCCCTCCTGTCTTCCACCCTTCTCGGTACCAACAGTGCAGTGCTTCTGTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAACAGAAGAGCATCTTCATCCTGCACCTGTCAGCCCTCAAACTACTGGCACCAGACAGAAGAACACTaGCAGCTTCCCAAGCGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GNRRASSSCTCQPSNYWHQTEEH*QLPKRF Trigger: GAAGCGCTTGGGAAGCTGGCAGTGTTCTTCTGTCTG...GTGCCAGTAGTTTGAGGGCTGACAGGTGCAGGATGAAGATGCTCTTCTGTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGACCAGACATAAATTTTTCATTCAAATGCCAGGGTGTTATGTGGTACAACTGGGACACCCCAGCTaGGGGCGGCAGGCTCTCGGG | + |
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Preference number: 2 (lower is better) Translates to: ILTRHKFFIQMPGCYVVQLGHPS*GRQALG Trigger: CCCGAGAGCCTGCCGCCCCCAGCTGGGGTGTCCCAG...TTGTACCACATAACACCCTGGCATTTGAATGAAAAATTTATGTCTGGTCAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCGTGCGGGTGGCAACACAGGTGTCAAGTCTGCTGTGCCACAGCCAGAAAGTTAAGGTATGGGCTATaGCACCTATTTGGTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LACGWQHRCQVCCATARKLRYGL*HLFGCF Trigger: AAAACAACCAAATAGGTGCCATAGCCCATACCTTAA...CTTTCTGGCTGTGGCACAGCAGACTTGACACCTGTGTTGCCACCCGCACGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCATCCTGCACCTGTCAGCCCTCAAACTACTGGCACCGAGGCAGGCCCGGACCTCATGTGTCAAAATaGATCTGGAAAGAAAATACA | + |
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Preference number: 2 (lower is better) Translates to: SSSCTCQPSNYWHRGRPGPHVSK*IWKENT Trigger: TGTATTTTCTTTCCAGATGCATTTTGACACATGAGG...TCCGGGCCTGCCTCGGTGCCAGTAGTTTGAGGGCTGACAGGTGCAGGATGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR GCA 90 bp | AGACAGAAGAACACTGCCAGCTTCCCAAGCGCTTCGAGAGAGAAAACTGTATCAGGCTGGCCTCGAACTTaGTGTTTAGCTAAGGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: RQKNTASFPSASREKTVSGWPRT*CLAKAL Trigger: TAAGGCCTTAGCTAAACAGCAAGTTCGAGGCCAGCC...TGATACAGTTTTCTCTCTCGAAGCGCTTGGGAAGCTGGCAGTGTTCTTCTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CAA 90 bp | AGGCTAGGATCTCACAGAGATCCACCTGCCTCTGGCTCCCAAGAGTaGGAATTAAGGTATGGGCTATGGCACCTATTTGGTTGTTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: RLGSHRDPPASGSQE*ELRYGLWHLFGCFV Trigger: AACAAAACAACCAAATAGGTGCCATAGCCCATACCTTAATTCCAACTCTTGGGAGCCAGAGGCAGGTGGATCTCTGTGAGATCCTAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTAGTCGGCTGCACTCACTAAGCTaGTGGAGACCACATGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: QSSHNSKVTSWGLSLLSRLHSLS*WRPHGN Trigger: ATTTCCATGTGGTCTCCACCAGCTTAGTGAGTGCAG...CCGACTAAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGACCAGACATAAATTTTTCATTCAAATGCCAGGGTGTTATGTGGTACAATGGTACCGAGAAGGGTaGAAGACAGGAGGGGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: ILTRHKFFIQMPGCYVVQWYREG*KTGGGG Trigger: CCCGCCCCCTCCTGTCTTCCACCCTTCTCGGTACCA...TTGTACCACATAACACCCTGGCATTTGAATGAAAAATTTATGTCTGGTCAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCTGACCAGACATAAATTTTTCATTCAAATGCCAGGGTGTTATGTGGTACAACTTCTGCCCAGGTCCTaGGGGCCTCTTCTTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ILTRHKFFIQMPGCYVVQLLPRS*GPLLQE Trigger: CTCCTGAAGAAGAGGCCCTCAGGACCTGGGCAGAAG...TTGTACCACATAACACCCTGGCATTTGAATGAAAAATTTATGTCTGGTCAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR CCA 90 bp | TTATGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTAATGTCACCTCAGGATaGGACTGGGATCCCTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LCQSSHNSKVTSWGLSLLNVTSG*DWDPCK Trigger: CTTGCAGGGATCCCAGTCCCATCCTGAGGTGACATT...AAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGACCAGACATAAATTTTTCATTCAAATGCCAGGGTGTTATGTGGTACAACCTGGGGCCTGTCATTaGTTAGTCGGTGGCCTTACA | + |
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Preference number: 2 (lower is better) Translates to: ILTRHKFFIQMPGCYVVQPGACH*LVGGLT Trigger: TGTAAGGCCACCGACTAAGCAATGACAGGCCCCAGG...TTGTACCACATAACACCCTGGCATTTGAATGAAAAATTTATGTCTGGTCAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR CCA 90 bp | TTATGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTCCTAGAACTCATGTTTaGACCAGGCTAGGATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LCQSSHNSKVTSWGLSLLPRTHV*TRLGSH Trigger: GTGAGATCCTAGCCTGGTCCAAACATGAGTTCTAGG...AAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGACCAGACATAAATTTTTCATTCAAATGCCAGGGTGTTATGTGGTACAATCACAGAGATCCACCTaGCTCTGGCTCCCAAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: ILTRHKFFIQMPGCYVVQSQRST*LWLPRV Trigger: AACTCTTGGGAGCCAGAGGCAGGTGGATCTCTGTGA...TTGTACCACATAACACCCTGGCATTTGAATGAAAAATTTATGTCTGGTCAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR GCA 72 bp | CCAGGCGGCCACACCCCCGCCACAGATGGTGCAAGCTaGTCACTTCCGCAGCCGGTGAGGACACAGGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: PGGHTPATDGAS*SLPQPVRTQGG Trigger: TCCTCCCTGTGTCCTCACCGGCTGCGGAAGTGAGCAGCTTGCACCATCTGTGGCGGGGGTGTGGCCGCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR GCA 72 bp | TCGCTGGCGTGCGGGTGGCAACACAGGTGTCAAGTCTaGTGTGCCACAGCCAGAAAGCACCAGGGACGCCAG | + |
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Preference number: 3 (lower is better) Translates to: SLACGWQHRCQV*CATARKHQGRQ Trigger: CTGGCGTCCCTGGTGCTTTCTGGCTGTGGCACAGCAGACTTGACACCTGTGTTGCCACCCGCACGCCAGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR TCA 72 bp | GGCAGGCCCGGAGGCTGCATTATTTTAATTCCCAAGTaGCCGCAGCACCCTGGAACCTCTCGCTGGCGTGCG | + |
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Preference number: 3 (lower is better) Translates to: GRPGGCIILIPK*PQHPGTSRWRA Trigger: CGCACGCCAGCGAGAGGTTCCAGGGTGCTGCGGTCACTTGGGAATTAAAATAATGCAGCCTCCGGGCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCGTGCGGGTGGCAACACAGGTGTCAAGTCTGCTGTGCCACAGCCAGAAAGCCAGAGGAACAAAGCTaGCCTAGACAGCACTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: LACGWQHRCQVCCATARKPEEQS*PRQHWL Trigger: CAACCAGTGCTGTCTAGGCAAGCTTTGTTCCTCTGG...CTTTCTGGCTGTGGCACAGCAGACTTGACACCTGTGTTGCCACCCGCACGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR TCA 72 bp | AGGAGGGGGCGGGGGCTAGAAAGCCTCCGTTTGACGTaGAGAAGGAGGAACAGTGAGGTTGTAGATCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: RRGRGLESLRLT*RRRNSEVVDLS Trigger: GCTCAGATCTACAACCTCACTGTTCCTCCTTCTTCACGTCAAACGGAGGCTTTCTAGCCCCCGCCCCCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 72 bp | CTGCATTATTTTAATTCCCAAGTGACCGCAGCACCCTaGAACCTCTCGCTGGCGTGCGGGTGGCAACACAGG | + |
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Preference number: 3 (lower is better) Translates to: LHYFNSQVTAAP*NLSLACGWQHR Trigger: CCTGTGTTGCCACCCGCACGCCAGCGAGAGGTTCCAGGGTGCTGCGGTCACTTGGGAATTAAAATAATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 72 bp | GCATCTTCATCCTGCACCTGTCAGCCCTCAAACTACTaGCACCGAGGCAGGCCCGGAGGCTGCATTATTTTA | + |
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Preference number: 3 (lower is better) Translates to: ASSSCTCQPSNY*HRGRPGGCIIL Trigger: TAAAATAATGCAGCCTCCGGGCCTGCCTCGGTGCCAGTAGTTTGAGGGCTGACAGGTGCAGGATGAAGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR GCA 72 bp | GGCCTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTaGAGGCTAGTCACCATTCCTAACAGAAGCACTGCA | + |
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Preference number: 3 (lower is better) Translates to: GLRLLILLLYWA*RLVTIPNRSTA Trigger: TGCAGTGCTTCTGTTAGGAATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR GCA 72 bp | CTTAGTCGGTGGCCTTACACTGTTTCTAGATACTTCTaGCCAGGTCCTGAGGGCCTCTTCTTCAGGAGCGAC | + |
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Preference number: 3 (lower is better) Translates to: LSRWPYTVSRYF*PGPEGLFFRSD Trigger: GTCGCTCCTGAAGAAGAGGCCCTCAGGACCTGGGCAGAAGTATCTAGAAACAGTGTAAGGCCACCGACTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 72 bp | TCACTCTATAGCTCTGGCTGCCCTAGAACTCATGTTTaGACCAGGCTAGGATCTCACAGAGATCCACCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SLYSSGCPRTHV*TRLGSHRDPPA Trigger: GGCAGGTGGATCTCTGTGAGATCCTAGCCTGGTCCAAACATGAGTTCTAGGGCAGCCAGAGCTATAGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR GCA 72 bp | TGTTTGGACCAGGCTAGGATCTCACAGAGATCCACCTaGCTCTGGCTCCCAAGAGTTGGAATTAAGGTATGG | + |
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Preference number: 3 (lower is better) Translates to: CLDQARISQRST*LWLPRVGIKVW Trigger: CCATACCTTAATTCCAACTCTTGGGAGCCAGAGGCAGGTGGATCTCTGTGAGATCCTAGCCTGGTCCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR GCA 72 bp | AGGAACTGTTTTGGAAACAGAAGAGCATCTTCATCCTaGACCTGTCAGCCCTCAAACTACTGGCACCGAGGC | + |
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Preference number: 3 (lower is better) Translates to: RNCFGNRRASSS*TCQPSNYWHRG Trigger: GCCTCGGTGCCAGTAGTTTGAGGGCTGACAGGTGCAGGATGAAGATGCTCTTCTGTTTCCAAAACAGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 72 bp | CTTTATTACCAGGACAATGTCACCTCAGGATGGGACTaGGATCCCTGCAAGATGGTTCTACATGGAACCCGG | + |
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Preference number: 3 (lower is better) Translates to: LYYQDNVTSGWD*DPCKMVLHGTR Trigger: CCGGGTTCCATGTAGAACCATCTTGCAGGGATCCCAGTCCCATCCTGAGGTGACATTGTCCTGGTAATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 72 bp | AAAGTGACTTCCTGGGGCCTGTCATTGCTTAGTCGGTaGCCTTACACTGTTTCTAGATACTTCTGCCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: KVTSWGLSLLSR*PYTVSRYFCPG Trigger: ACCTGGGCAGAAGTATCTAGAAACAGTGTAAGGCCACCGACTAAGCAATGACAGGCCCCAGGAAGTCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 72 bp | TCTTTAGGACAACACCACAAACCCAGGGATCCCCAGTaGGGAGGAGGGAACAGATCTTTTATGTCAAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: SLGQHHKPRDPQ*GGGNRSFMSKF Trigger: GAACTTTGACATAAAAGATCTGTTCCCTCCTCCCCACTGGGGATCCCTGGGTTTGTGGTGTTGTCCTAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR GCA 72 bp | AGAACACGCAAGATCAAAGTGTCCGTTACTACTTCCTaGGGACAGAAACGGCTCTTTAGGACAACACCACAA | + |
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Preference number: 3 (lower is better) Translates to: RTRKIKVSVTTS*GQKRLFRTTPQ Trigger: TTGTGGTGTTGTCCTAAAGAGCCGTTTCTGTCCGCAGGAAGTAGTAACGGACACTTTGATCTTGCGTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 72 bp | TTATGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTaGGGCCTGTCATTGCTTAGTCGGTGGCCTTACACT | + |
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Preference number: 3 (lower is better) Translates to: LCQSSHNSKVTS*GLSLLSRWPYT Trigger: AGTGTAAGGCCACCGACTAAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| 3UTR CCA 72 bp | ACCTGCCTCTGGCTCCCAAGAGTTGGAATTAAGGTATaGGCTATGGCACCTATTTGGTTGTTTTGTTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TCLWLPRVGIKV*AMAPIWLFCFV Trigger: AACAAAACAAAACAACCAAATAGGTGCCATAGCCCATACCTTAATTCCAACTCTTGGGAGCCAGAGGCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTCCACACACAGATCCAAGGCAGGAGCCAGGCGGCCACACCCCCGCCACAGCGCCATCCCACAGCTTaGTGCAGCCGTCCTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFHTQIQGRSQAATPPPQRHPTA*CSRPCC Trigger: GCAGCAAGGACGGCTGCATCAAGCTGTGGGATGGCG...CTGTGGCGGGGGTGTGGCCGCCTGGCTCCTGCCTTGGATCTGTGTGTGGAAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCGTGCGGGTGGCAACACAGGTGTCAAGTCTGCTGTGCCACAGCCAGAAAGCCAGCGTCCGCCCTGTaGAAATCTCCCAGAGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LACGWQHRCQVCCATARKPASAL*KSPRVS Trigger: CGAAACTCTGGGAGATTTCCACAGGGCGGACGCTGG...CTTTCTGGCTGTGGCACAGCAGACTTGACACCTGTGTTGCCACCCGCACGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCGTGCGGGTGGCAACACAGGTGTCAAGTCTGCTGTGCCACAGCCAGAAAGCGCACGATGTTGTTGTaGCCCAGGGACAGCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LACGWQHRCQVCCATARKRTMLL*PRDSRF Trigger: GAACCTGCTGTCCCTGGGCCACAACAACATCGTGCG...CTTTCTGGCTGTGGCACAGCAGACTTGACACCTGTGTTGCCACCCGCACGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCGTGCGGGTGGCAACACAGGTGTCAAGTCTGCTGTGCCACAGCCAGAAAGGAGTTCCCACCAGGATaGAGTCTCCAGAAGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LACGWQHRCQVCCATARKEFPPG*SLQKGG Trigger: TCCACCCTTCTGGAGACTTCATCCTGGTGGGAACTC...CTTTCTGGCTGTGGCACAGCAGACTTGACACCTGTGTTGCCACCCGCACGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCATCTTCATCCTGCACCTGTCAGCCCTCAAACTACTGGCACCGAGGCATGTGTCCGGTGCACTTaGCGTCCGCTCAGACCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EEHLHPAPVSPQTTGTEACVRCT*RPLRPA Trigger: CGCAGGTCTGAGCGGACGGCAAGTGCACCGGACACA...TGCCTCGGTGCCAGTAGTTTGAGGGCTGACAGGTGCAGGATGAAGATGCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | CTTCATCCTGCACCTGTCAGCCCTCAAACTACTGGCACCGAGGCAGGCCCGGAGCGACCAATGGCATACTaGACCGCAGTGTCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHPAPVSPQTTGTEAGPERPMAY*TAVSSF Trigger: GAACGATGACACTGCGGTCCAGTATGCCATTGGTCG...CTCCGGGCCTGCCTCGGTGCCAGTAGTTTGAGGGCTGACAGGTGCAGGATGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTGCAGGCTAGTCACCATTGGGACAGCAGGTTCCTaGGCTCAGCTGTCCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRLLILLLYWACRLVTIGTAGS*AQLSWS Trigger: ACTCCAGGACAGCTGAGCGCAGGAACCTGCTGTCCC...AATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | CTAACAGAAGCACTGCACTGTTGGTACCGAGAAGGGTGGAAGACAGGAGGGGGCGGGGCGCACACCGACTaGGGCTTGATCTCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTEALHCWYREGWKTGGGGAHTD*GLISLM Trigger: CATCAATGAGATCAAGCCCCAGTCGGTGTGCGCCCC...GCCCCCTCCTGTCTTCCACCCTTCTCGGTACCAACAGTGCAGTGCTTCTGTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | CTAACAGAAGCACTGCACTGTTGGTACCGAGAAGGGTGGAAGACAGGAGGGGGCCATACAGGCGAAGCGTaGGATGCTGAGTTCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LTEALHCWYREGWKTGGGHTGEA*DAEFPP Trigger: TGGTGGGAACTCAGCATCCCACGCTTCGCCTGTATG...GCCCCCTCCTGTCTTCCACCCTTCTCGGTACCAACAGTGCAGTGCTTCTGTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| 3UTR CAA 72 bp | AGGCTAGTCACCATTCCTAACAGAAGCACTGCACTGTaGGTACCGAGAAGGGTGGAAGACAGGAGGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLVTIPNRSTAL*VPRRVEDRRGR Trigger: CCGCCCCCTCCTGTCTTCCACCCTTCTCGGTACCAACAGTGCAGTGCTTCTGTTAGGAATGGTGACTAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGCCACAGCCAGAAAGCACCAGGGACGCCAGAGGAACAAAGCTTGCCTACTCGGAAGCCTCTGGTaGCATTGTTTGAACGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCATARKHQGRQRNKACLLGSLW*HCLNVC Trigger: GCAGACGTTCAAACAATGTCACCAGAGGCTTCCGAG...TAGGCAAGCTTTGTTCCTCTGGCGTCCCTGGTGCTTTCTGGCTGTGGCACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGTTTCACTCTATAGCTCTGGCTGCCCTAGAACTCATGTTTGGACCAGGCCCCAGCAGCACAGGCTaGTGGTCCTTTCGTCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRFHSIALAALELMFGPGPSSTG*WSFRPA Trigger: TGCCGGACGAAAGGACCATCAGCCTGTGCTGCTGGG...GCCTGGTCCAAACATGAGTTCTAGGGCAGCCAGAGCTATAGAGTGAAACCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | AACCCGGCTCCTCAGAGATGTAGCCCTCCTCATGTGTCAAAATGCATCTGGAAACATCGCTGCACGTCATaGAGCCAGGGTTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NPAPQRCSPPHVSKCIWKHRCTS*SQGWWG Trigger: CCCCCACCAACCCTGGCTTCATGACGTGCAGCGATG...TTTCCAGATGCATTTTGACACATGAGGAGGGCTACATCTCTGAGGAGCCGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGGTTTCACTCTATAGCTCTGGCTGCCCTAGAACTCATGTTTGGACCAGGCATGAGATGCAGGAGCTaGTCCGAGGGGGCGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: TRFHSIALAALELMFGPGMRCRS*SEGAHT Trigger: GGTGTGCGCCCCCTCGGAGCAGCTCCTGCATCTCAT...GCCTGGTCCAAACATGAGTTCTAGGGCAGCCAGAGCTATAGAGTGAAACCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTGCAGGCTAGTCACCATTCCTCCTAGCTTGATGAGATaGAGGAGCTGCTCCGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLLILLLYWACRLVTIPPSLMR*RSCSEG Trigger: CCCCTCGGAGCAGCTCCTGCATCTCATCAAGCTAGG...AGGAATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | AACAGAAGCACTGCACTGTTGGTACCGAGAAGGGTGGAAGACAGGAGGGGGCGGGCTGGTCTTGGGGATTaGAGGAGACAAAACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRSTALLVPRRVEDRRGRAGLGD*RRQNTG Trigger: TCCAGTGTTTTGTCTCCTGCAATCCCCAAGACCAGC...CCGCCCCCTCCTGTCTTCCACCCTTCTCGGTACCAACAGTGCAGTGCTTCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| 3UTR CAA 72 bp | AGCCAGAAAGCACCAGGGACGCCAGAGGAACAAAGCTaGCCTAGACAGCACTGGTTGTCCTTGTCCCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SQKAPGTPEEQS*PRQHWLSLSLT Trigger: GGTTAGGGACAAGGACAACCAGTGCTGTCTAGGCAAGCTTTGTTCCTCTGGCGTCCCTGGTGCTTTCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | CCTAGAACTCATGTTTGGACCAGGCTAGGATCTCACAGAGATCCACCTGCCTCTGGCAGAGCAGACTTCTaGCCCATCGTGAGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRTHVWTRLGSHRDPPASGRADF*PIVSLL Trigger: GAGAAGGCTCACGATGGGGCAGAAGTCTGCTCTGCC...AGAGGCAGGTGGATCTCTGTGAGATCCTAGCCTGGTCCAAACATGAGTTCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | CCTAGAACTCATGTTTGGACCAGGCTAGGATCTCACAGAGATCCACCTGCCTCTAGTCCTCAGTGTGGTTaGACACTGCCTGTGTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTHVWTRLGSHRDPPASSPQCG*TLPVSG Trigger: ACCGGACACAGGCAGTGTTCAACCACACTGAGGACT...AGAGGCAGGTGGATCTCTGTGAGATCCTAGCCTGGTCCAAACATGAGTTCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCAGGTCCTGAGGGCCTCTTCTTCAGGAGCGACAGAAAGCAGACTGTGTAAGTCTCCAGAAGGGTaGAAAGAGATGGAACGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SAQVLRASSSGATESRLCKSPEG*KEMERN Trigger: GTTGCGTTCCATCTCTTTCCACCCTTCTGGAGACTT...ACACAGTCTGCTTTCTGTCGCTCCTGAAGAAGAGGCCCTCAGGACCTGGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCAGGTCCTGAGGGCCTCTTCTTCAGGAGCGACAGAAAGCAGACTGTGTCATCATGACCTCAATTaGCATGGCACTTTTGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAQVLRASSSGATESRLCHHDLN*HGTFGQ Trigger: TTGGCCAAAAGTGCCATGCCAATTGAGGTCATGATG...ACACAGTCTGCTTTCTGTCGCTCCTGAAGAAGAGGCCCTCAGGACCTGGGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGTTTCACTCTATAGCTCTGGCTGCCCTAGAACTCATGTTTGGACCAGGCATGGCATCGGTGTGCTaGTCTTGGGGATTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRFHSIALAALELMFGPGMASVC*SWGLQE Trigger: CTCCTGCAATCCCCAAGACCAGCACACCGATGCCAT...GCCTGGTCCAAACATGAGTTCTAGGGCAGCCAGAGCTATAGAGTGAAACCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGTTTCACTCTATAGCTCTGGCTGCCCTAGAACTCATGTTTGGACCAGGCACTTCTGCCCCATCGTaGGCCTTCTCAAAGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRFHSIALAALELMFGPGTSAPS*AFSKVV Trigger: CACAACCTTTGAGAAGGCTCACGATGGGGCAGAAGT...GCCTGGTCCAAACATGAGTTCTAGGGCAGCCAGAGCTATAGAGTGAAACCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAACTGTTTTGGAAACAGAAGAGCATCTTCATCCTGCACCTGTCAGCCCTCTGGGGGAGTGCACTATaGAGCGCACGATGTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EELFWKQKSIFILHLSALWGSAL*SARCCC Trigger: ACAACAACATCGTGCGCTGCATAGTGCACTCCCCCA...GAGGGCTGACAGGTGCAGGATGAAGATGCTCTTCTGTTTCCAAAACAGTTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCAGGTCCTGAGGGCCTCTTCTTCAGGAGCGACAGAAAGCAGACTGTGTTTGGCATGGCACTTTTaGCCAACATTCTTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAQVLRASSSGATESRLCLAWHF*PTFFLC Trigger: ACACAGAAAGAATGTTGGCCAAAAGTGCCATGCCAA...ACACAGTCTGCTTTCTGTCGCTCCTGAAGAAGAGGCCCTCAGGACCTGGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGCCACAGCCAGAAAGCACCAGGGACGCCAGAGGAACAAAGCTTGCCTACTTCCTGAATGTATTTaGAAGCTCTTTTTGCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: CCATARKHQGRQRNKACLLPECI*KLFLQT Trigger: CGTCTGCAAAAAGAGCTTTCAAATACATTCAGGAAG...TAGGCAAGCTTTGTTCCTCTGGCGTCCCTGGTGCTTTCTGGCTGTGGCACAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGCCTGTCATTGCTTAGTCGGTGGCCTTACACTGTTTCTAGATACTTCTCAGTCTCATTCATCATaGCCTCAATTGGCATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGACHCLVGGLTLFLDTSQSHSS*PQLAWH Trigger: GTGCCATGCCAATTGAGGTCATGATGAATGAGACTG...AGAAGTATCTAGAAACAGTGTAAGGCCACCGACTAAGCAATGACAGGCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTGCAGGCTAGTCACCATTAGAGTCTTTTCCACTTaGGAGGATGTACTTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GLRLLILLLYWACRLVTIRVFST*EDVLGI Trigger: AATTCCAAGTACATCCTCTCAAGTGGAAAAGACTCT...AATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGCCTGTCATTGCTTAGTCGGTGGCCTTACACTGTTTCTAGATACTTCTATCTGTTCTGTTGGGTaGAAAGCAAGACACGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGACHCLVGGLTLFLDTSICSVG*KARHVT Trigger: AGTCACGTGTCTTGCTTTTCACCCAACAGAACAGAT...AGAAGTATCTAGAAACAGTGTAAGGCCACCGACTAAGCAATGACAGGCCCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR TCA 90 bp | TTATGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTCAGAGTATAATCCCTTaGGCCCGAGGCCAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCQSSHNSKVTSWGLSLLQSIIP*ARGQDL Trigger: CAGATCCTGGCCTCGGGCTCAAGGGATTATACTCTG...AAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGCCTGTCATTGCTTAGTCGGTGGCCTTACACTGTTTCTAGATACTTCTCAGGATCTGTTCTGTTaGGTGAAAAGCAAGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: PGACHCLVGGLTLFLDTSQDLFC*VKSKTR Trigger: ACGTGTCTTGCTTTTCACCCAACAGAACAGATCCTG...AGAAGTATCTAGAAACAGTGTAAGGCCACCGACTAAGCAATGACAGGCCCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | TTTATGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTAGTGTGGTTGAACACTaGCTGTGTCCGGTGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FMSKFSQLKSDFLGPVIASVVEH*LCPVHL Trigger: CAAGTGCACCGGACACAGGCAGTGTTCAACCACACT...AGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTGACCAGACATAAATTTTTCATTCAAATGCCAGGGTGTTATGTGGTACAAGGGTTGGTGGGGGAGTaGACTATGCAGCGCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: ILTRHKFFIQMPGCYVVQGLVGE*TMQRTM Trigger: CATCGTGCGCTGCATAGTGCACTCCCCCACCAACCC...TTGTACCACATAACACCCTGGCATTTGAATGAAAAATTTATGTCTGGTCAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | GAACACGCAAGATCAAAGTGTCCGTTACTACTTCCTGCGGACAGAAACGGCTCTTGTCCAGTATCTTTATaGAAGCATCAGCAGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EHARSKCPLLLPADRNGSCPVSL*KHQQIL Trigger: CAGGATCTGCTGATGCTTCCATAAAGATACTGGACA...AGAGCCGTTTCTGTCCGCAGGAAGTAGTAACGGACACTTTGATCTTGCGTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTGCAGGCTAGTCACCATTCCTTTTGAAAGCTCTTTTTaGAGACGGTTTGGAATAATC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLILLLYWACRLVTIPFESSF*RRFGII Trigger: GATTATTCCAAACCGTCTGCAAAAAGAGCTTTCAAA...AGGAATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | TGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTAGTGTTCGGATCACTGGGTaGTTCTCCATGTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CQSSHNSKVTSWGLSLLSVRITG*FSMFCC Trigger: ACAACAGAACATGGAGAACCACCCAGTGATCCGAAC...ACTAAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | GAACACGCAAGATCAAAGTGTCCGTTACTACTTCCTGCGGACAGAAACGGCTCTTGTACTTGGAATTCTTaGAGAAAATGGCAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EHARSKCPLLLPADRNGSCTWNS*RKWQSR Trigger: TCTGCTCTGCCATTTTCTCCAAGAATTCCAAGTACA...AGAGCCGTTTCTGTCCGCAGGAAGTAGTAACGGACACTTTGATCTTGCGTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAACTGTTTTGGAAACAGAAGAGCATCTTCATCCTGCACCTGTCAGCCCTCTTGAGAGGATGTACTTaGAATTCTTGGAGAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EELFWKQKSIFILHLSALLRGCT*NSWRKW Trigger: CCATTTTCTCCAAGAATTCCAAGTACATCCTCTCAA...GAGGGCTGACAGGTGCAGGATGAAGATGCTCTTCTGTTTCCAAAACAGTTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTAGTCTCCATGTTCTGTTGTaGAGTCTCATTCATCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: CQSSHNSKVTSWGLSLLSLHVLL*SLIHHD Trigger: GTCATGATGAATGAGACTGCACAACAGAACATGGAG...ACTAAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | TTTATGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTAAGGGTGGAAAGAGATaGAACGCAACATTTCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FMSKFSQLKSDFLGPVIAKGGKR*NATFRL Trigger: AAGCCGAAATGTTGCGTTCCATCTCTTTCCACCCTT...AGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CCA 90 bp | TGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTAGTCAGGAGACAAAACACTaGAAGGTGTTGATGTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: CQSSHNSKVTSWGLSLLSQETKH*KVLMSY Trigger: GTATGACATCAACACCTTCCAGTGTTTTGTCTCCTG...ACTAAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTCCACACACAGATCCAAGGCAGGAGCCAGGCGGCCACACCCCCGCCACAGGTCATGAAGCCAGGGTaGGTGGGGGAGTGCACTATG | + |
|
Preference number: 5 (lower is better) Translates to: SFHTQIQGRSQAATPPPQVMKPG*VGECTM Trigger: CATAGTGCACTCCCCCACCAACCCTGGCTTCATGAC...CTGTGGCGGGGGTGTGGCCGCCTGGCTCCTGCCTTGGATCTGTGTGTGGAAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS GCA 90 bp | CGGAAGTCATCGCTGCACGTCATGAAGCCAGGGTTGGTGGGGGAGTaGACTATGCAGCGCACGATGTTGTTGTGGCCCAGGGACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKSSLHVMKPGLVGE*TMQRTMLLWPRDSR Trigger: CCTGCTGTCCCTGGGCCACAACAACATCGTGCGCTGCATAGTGCACTCCCCCACCAACCCTGGCTTCATGACGTGCAGCGATGACTTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 90 bp | ACCTCCGGTACCAGAACCGAGCTCGGAAGTCATCGCTGCACGTCATaGAGCCAGGGTTGGTGGGGGAGTGCACTATGCAGCGCACGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TSGTRTELGSHRCTS*SQGWWGSALCSARC Trigger: ACATCGTGCGCTGCATAGTGCACTCCCCCACCAACCCTGGCTTCATGACGTGCAGCGATGACTTCCGAGCTCGGTTCTGGTACCGGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 90 bp | GCAGGTTCCTGCGCTCAGCTGTCCTGGAGTCCCAGCAGCACAGGCTaGTGGTCCTTTCGTCCGGCAGCAAAATATAGTCCTCAGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AGSCAQLSWSPSSTG*WSFRPAAKYSPQCG Trigger: ACCACACTGAGGACTATATTTTGCTGCCGGACGAAAGGACCATCAGCCTGTGCTGCTGGGACTCCAGGACAGCTGAGCGCAGGAACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS GCA 90 bp | GCAGTGTCATCGTTCTCCATCCCTAGCTTGATGAGATGCAGGAGCTaGTCCGAGGGGGCGCACACCGACTGGGGCTTGATCTCATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AVSSFSIPSLMRCRS*SEGAHTDWGLISLM Trigger: CATCAATGAGATCAAGCCCCAGTCGGTGTGCGCCCCCTCGGAGCAGCTCCTGCATCTCATCAAGCTAGGGATGGAGAACGATGACACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS GCA 90 bp | CCTTTCGTCCGGCAGCAAAATATAGTCCTCAGTGTGGTTGAACACTaGCTGTGTCCGGTGCACTTGCCGTCCGCTCAGACCTGCGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PFVRQQNIVLSVVEH*LCPVHLPSAQTCAC Trigger: ACAGGCGCAGGTCTGAGCGGACGGCAAGTGCACCGGACACAGGCAGTGTTCAACCACACTGAGGACTATATTTTGCTGCCGGACGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CCA 90 bp | ATCCCTGTGCCCGGGGCAACCGTGTCAGAGCGACCAATGGCATACTaGACCGCAGTGTCATCGTTCTCCATCCCTAGCTTGATGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: IPVPGATVSERPMAY*TAVSSFSIPSLMRC Trigger: GCATCTCATCAAGCTAGGGATGGAGAACGATGACACTGCGGTCCAGTATGCCATTGGTCGCTCTGACACGGTTGCCCCGGGCACAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS GCA 90 bp | GTGACATTGTTTGAACGTCTGCATCAAACTCCAGGTCGATCCCTGTaGCCGGGGCAACCGTGTCAGAGCGACCAATGGCATACTGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: VTLFERLHQTPGRSL*PGQPCQSDQWHTGP Trigger: CGGTCCAGTATGCCATTGGTCGCTCTGACACGGTTGCCCCGGGCACAGGGATCGACCTGGAGTTTGATGCAGACGTTCAAACAATGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS CCA 90 bp | GTCCGCTCAGACCTGCGCCTGTGTACCTCACCAGCGTCCGCCCTGTaGAAATCTCCCAGAGTTTCGCTACAGAGTCTTTTCCACTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VRSDLRLCTSPASAL*KSPRVSLQSLFHLR Trigger: TCTCAAGTGGAAAAGACTCTGTAGCGAAACTCTGGGAGATTTCCACAGGGCGGACGCTGGTGAGGTACACAGGCGCAGGTCTGAGCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | AACAGAAGCACTGCACTGTTGGTACCGAGAAGGGTGGAAGACAGGAGGGGGCGGATCGGTGTGCTGGTCTaGGGGATTGCAGGAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: NRSTALLVPRRVEDRRGRIGVLV*GIAGDK Trigger: TTTGTCTCCTGCAATCCCCAAGACCAGCACACCGAT...CCGCCCCCTCCTGTCTTCCACCCTTCTCGGTACCAACAGTGCAGTGCTTCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTGCAGGCTAGTCACCATTTTGATGCAGCCGTCCTaGCTGCCAGTGACGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: GLRLLILLLYWACRLVTILMQPS*LPVTYM Trigger: CATGTACGTCACTGGCAGCAAGGACGGCTGCATCAA...AATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGGCCTGTCATTGCTTAGTCGGTGGCCTTACACTGTTTCTAGATACTTCTCAGCGCACGATGTTGTaGTGGCCCAGGGACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGACHCLVGGLTLFLDTSQRTML*WPRDSR Trigger: CCTGCTGTCCCTGGGCCACAACAACATCGTGCGCTG...AGAAGTATCTAGAAACAGTGTAAGGCCACCGACTAAGCAATGACAGGCCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 90 bp | CGTCTCTGCTGTAGGTGGCCACGCGGCACGGGCCTTTGTGGGAAGTaGCATAACAGGTTTCATACTCGGAAGCCTCTGGTGACATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLCCRWPRGTGLCGK*HNRFHTRKPLVTLF Trigger: AAACAATGTCACCAGAGGCTTCCGAGTATGAAACCTGTTATGTCACTTCCCACAAAGGCCCGTGCCGCGTGGCCACCTACAGCAGAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTGCAGGCTAGTCACCATTCCTCACACCGACTGGGGCTaGATCTCATTGATGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRLLILLLYWACRLVTIPHTDWG*ISLMRP Trigger: TGGCCTCATCAATGAGATCAAGCCCCAGTCGGTGTG...AGGAATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTGCAGGCTAGTCACCATTTTCTCCATCCCTAGCTaGATGAGATGCAGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLRLLILLLYWACRLVTIFSIPS*MRCRSC Trigger: GCAGCTCCTGCATCTCATCAAGCTAGGGATGGAGAA...AATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 90 bp | AGCCCGAGGCCAGGATCTGTTCTGTTGGGTGAAAAGCAAGACACGTaGCTTCATCCACGTGGTCGTAAAGAGTTCGGATCACTGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPRPGSVLLGEKQDT*LHPRGRKEFGSLGG Trigger: ACCACCCAGTGATCCGAACTCTTTACGACCACGTGGATGAAGTCACGTGTCTTGCTTTTCACCCAACAGAACAGATCCTGGCCTCGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 90 bp | TGTGCTGGTCTTGGGGATTGCAGGAGACAAAACACTGGAAGGTGTTaGTGTCATACAGGCGAAGCGTGGGATGCTGAGTTCCCACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CAGLGDCRRQNTGRC*CHTGEAWDAEFPPG Trigger: TCCTGGTGGGAACTCAGCATCCCACGCTTCGCCTGTATGACATCAACACCTTCCAGTGTTTTGTCTCCTGCAATCCCCAAGACCAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCATCCTGCACCTGTCAGCCCTCAAACTACTGGCACCGAGGCAGGCCCGGAATGTACTTGGAATTCTaGGAGAAAATGGCAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCTCQPSNYWHRGRPGMYLEF*EKMAEQ Trigger: CTGCTCTGCCATTTTCTCCAAGAATTCCAAGTACAT...TCCGGGCCTGCCTCGGTGCCAGTAGTTTGAGGGCTGACAGGTGCAGGATGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 90 bp | AAACACTGGAAGGTGTTGATGTCATACAGGCGAAGCGTGGGATGCTaGGTTCCCACCAGGATGAAGTCTCCAGAAGGGTGGAAAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KHWKVLMSYRRSVGC*VPTRMKSPEGWKEM Trigger: CATCTCTTTCCACCCTTCTGGAGACTTCATCCTGGTGGGAACTCAGCATCCCACGCTTCGCCTGTATGACATCAACACCTTCCAGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS GCA 90 bp | GAGGATGTACTTGGAATTCTTGGAGAAAATGGCAGAGCAGACTTCTaGCCCATCGTGAGCCTTCTCAAAGGTTGTGATGCAGCGGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EDVLGILGENGRADF*PIVSLLKGCDAAVG Trigger: TCCAACCGCTGCATCACAACCTTTGAGAAGGCTCACGATGGGGCAGAAGTCTGCTCTGCCATTTTCTCCAAGAATTCCAAGTACATCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGACTCCTGATCCTCCTGCTCTACTGGGCTTGCAGGCTAGTCACCATTCCTATTGGCATGGCACTTTaGGCCAACATTCTTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRLLILLLYWACRLVTIPIGMAL*ANILSV Trigger: CACAGAAAGAATGTTGGCCAAAAGTGCCATGCCAAT...AGGAATGGTGACTAGCCTGCAAGCCCAGTAGAGCAGGAGGATCAGGAGTCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGAAGAACACTGCCAGCTTCCCAAGCGCTTCGAGAGAGAAAACTGTATCATCAGAGTATAATCCCTaGAGCCCGAGGCCAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RQKNTASFPSASREKTVSSEYNP*SPRPGS Trigger: AGATCCTGGCCTCGGGCTCAAGGGATTATACTCTGA...TGATACAGTTTTCTCTCTCGAAGCGCTTGGGAAGCTGGCAGTGTTCTTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTCAAACTACTGGCACCGAGGCAGGCCCGGAGGCTGCATTATTTTAATTGTTCTCCATGTTCTGTaGTGCAGTCTCATTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: QPSNYWHRGRPGGCIILIVLHVL*CSLIHH Trigger: ATGATGAATGAGACTGCACAACAGAACATGGAGAAC...AATTAAAATAATGCAGCCTCCGGGCCTGCCTCGGTGCCAGTAGTTTGAGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CCA 90 bp | AAGACACGTGACTTCATCCACGTGGTCGTAAAGAGTTCGGATCACTaGGTGGTTCTCCATGTTCTGTTGTGCAGTCTCATTCATCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: KTRDFIHVVVKSSDH*VVLHVLLCSLIHHD Trigger: GTCATGATGAATGAGACTGCACAACAGAACATGGAGAACCACCCAGTGATCCGAACTCTTTACGACCACGTGGATGAAGTCACGTGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 90 bp | TTTGTGGGAAGTGACATAACAGGTTTCATACTCGGAAGCCTCTGGTaGCATTGTTTGAACGTCTGCATCAAACTCCAGGTCGATCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FVGSDITGFILGSLW*HCLNVCIKLQVDPC Trigger: ACAGGGATCGACCTGGAGTTTGATGCAGACGTTCAAACAATGTCACCAGAGGCTTCCGAGTATGAAACCTGTTATGTCACTTCCCACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS-3UTR CAA 90 bp | TGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTAGTCCAGGATCTGTTCTGTaGGGTGAAAAGCAAGACACG | + |
|
Preference number: 5 (lower is better) Translates to: CQSSHNSKVTSWGLSLLSPGSVL*GEKQDT Trigger: CGTGTCTTGCTTTTCACCCAACAGAACAGATCCTGG...ACTAAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 90 bp | TGCAGACGGTTTGGAATAATCGAACAATTTCAGAGTATAATCCCTTaGGCCCGAGGCCAGGATCTGTTCTGTTGGGTGAAAAGCAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: CRRFGIIEQFQSIIP*ARGQDLFCWVKSKT Trigger: TGTCTTGCTTTTCACCCAACAGAACAGATCCTGGCCTCGGGCTCAAGGGATTATACTCTGAAATTGTTCGATTATTCCAAACCGTCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | TTATGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTTGGGGCTTGATCTCATaGATGAGGCCATTGGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: LCQSSHNSKVTSWGLSLLWGLIS*MRPLAI Trigger: TATCGCCAATGGCCTCATCAATGAGATCAAGCCCCA...AAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS-3UTR CAA 90 bp | TGTCAAAGTTCTCACAACTCAAAAGTGACTTCCTGGGGCCTGTCATTGCTTAGTCTTGAGAGGATGTACTaGGAATTCTTGGAGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: CQSSHNSKVTSWGLSLLSLERMY*EFLEKM Trigger: CATTTTCTCCAAGAATTCCAAGTACATCCTCTCAAG...ACTAAGCAATGACAGGCCCCAGGAAGTCACTTTTGAGTTGTGAGAACTTTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS GCA 72 bp | TGCCTGTGTCCGGTGCACTTGCCGTCCGCTCAGACCTaGGCCTGTGTACCTCACCAGCGTCCGCCCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CLCPVHLPSAQT*ACVPHQRPPCG Trigger: TCCACAGGGCGGACGCTGGTGAGGTACACAGGCGCAGGTCTGAGCGGACGGCAAGTGCACCGGACACAGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CCA 72 bp | GTGGGGGAGTGCACTATGCAGCGCACGATGTTGTTGTaGCCCAGGGACAGCAGGTTCCTGCGCTCAGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGECTMQRTMLL*PRDSRFLRSAV Trigger: GACAGCTGAGCGCAGGAACCTGCTGTCCCTGGGCCACAACAACATCGTGCGCTGCATAGTGCACTCCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CAA 72 bp | GGGTTGGTGGGGGAGTGCACTATGCAGCGCACGATGTaGTTGTGGCCCAGGGACAGCAGGTTCCTGCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLVGECTMQRTM*LWPRDSRFLRS Trigger: TGAGCGCAGGAACCTGCTGTCCCTGGGCCACAACAACATCGTGCGCTGCATAGTGCACTCCCCCACCAACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS GCA 72 bp | TCGTTCTCCATCCCTAGCTTGATGAGATGCAGGAGCTaGTCCGAGGGGGCGCACACCGACTGGGGCTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: SFSIPSLMRCRS*SEGAHTDWGLI Trigger: GATCAAGCCCCAGTCGGTGTGCGCCCCCTCGGAGCAGCTCCTGCATCTCATCAAGCTAGGGATGGAGAACGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS GCA 72 bp | TCAGTGTGGTTGAACACTGCCTGTGTCCGGTGCACTTaGCGTCCGCTCAGACCTGCGCCTGTGTACCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SVWLNTACVRCT*RPLRPAPVYLT Trigger: GGTGAGGTACACAGGCGCAGGTCTGAGCGGACGGCAAGTGCACCGGACACAGGCAGTGTTCAACCACACTGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS GCA 72 bp | TCGCTGCACGTCATGAAGCCAGGGTTGGTGGGGGAGTaGACTATGCAGCGCACGATGTTGTTGTGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLHVMKPGLVGE*TMQRTMLLWPR Trigger: CCTGGGCCACAACAACATCGTGCGCTGCATAGTGCACTCCCCCACCAACCCTGGCTTCATGACGTGCAGCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CCA 72 bp | TCCCTGTGCCCGGGGCAACCGTGTCAGAGCGACCAATaGCATACTGGACCGCAGTGTCATCGTTCTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SLCPGQPCQSDQ*HTGPQCHRSPS Trigger: GGATGGAGAACGATGACACTGCGGTCCAGTATGCCATTGGTCGCTCTGACACGGTTGCCCCGGGCACAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS CAA 72 bp | CTCAGTGTGGTTGAACACTGCCTGTGTCCGGTGCACTaGCCGTCCGCTCAGACCTGCGCCTGTGTACCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSVVEHCLCPVH*PSAQTCACVPH Trigger: GTGAGGTACACAGGCGCAGGTCTGAGCGGACGGCAAGTGCACCGGACACAGGCAGTGTTCAACCACACTGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CAA 72 bp | TTGGTGGGGGAGTGCACTATGCAGCGCACGATGTTGTaGTGGCCCAGGGACAGCAGGTTCCTGCGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVGECTMQRTML*WPRDSRFLRSA Trigger: AGCTGAGCGCAGGAACCTGCTGTCCCTGGGCCACAACAACATCGTGCGCTGCATAGTGCACTCCCCCACCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CAA 90 bp | CAGAACCGAGCTCGGAAGTCATCGCTGCACGTCATGAAGCCAGGGTaGGTGGGGGAGTGCACTATGCAGCGCACGATGTTGTTGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QNRARKSSLHVMKPG*VGECTMQRTMLLWP Trigger: GGGCCACAACAACATCGTGCGCTGCATAGTGCACTCCCCCACCAACCCTGGCTTCATGACGTGCAGCGATGACTTCCGAGCTCGGTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 72 bp | ACCAGAACCGAGCTCGGAAGTCATCGCTGCACGTCATaGAGCCAGGGTTGGTGGGGGAGTGCACTATGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRTELGSHRCTS*SQGWWGSALCS Trigger: GCTGCATAGTGCACTCCCCCACCAACCCTGGCTTCATGACGTGCAGCGATGACTTCCGAGCTCGGTTCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CCA 72 bp | AGATGCAGGAGCTGCTCCGAGGGGGCGCACACCGACTaGGGCTTGATCTCATTGATGAGGCCATTGGCGATA | + |
|
Preference number: 6 (lower is better) Translates to: RCRSCSEGAHTD*GLISLMRPLAI Trigger: TATCGCCAATGGCCTCATCAATGAGATCAAGCCCCAGTCGGTGTGCGCCCCCTCGGAGCAGCTCCTGCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS CCA 72 bp | CCCGGGGCAACCGTGTCAGAGCGACCAATGGCATACTaGACCGCAGTGTCATCGTTCTCCATCCCTAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGATVSERPMAY*TAVSSFSIPSL Trigger: CAAGCTAGGGATGGAGAACGATGACACTGCGGTCCAGTATGCCATTGGTCGCTCTGACACGGTTGCCCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS CAA 72 bp | GCTCGGAAGTCATCGCTGCACGTCATGAAGCCAGGGTaGGTGGGGGAGTGCACTATGCAGCGCACGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ARKSSLHVMKPG*VGECTMQRTML Trigger: CAACATCGTGCGCTGCATAGTGCACTCCCCCACCAACCCTGGCTTCATGACGTGCAGCGATGACTTCCGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CAA 90 bp | AATATAGTCCTCAGTGTGGTTGAACACTGCCTGTGTCCGGTGCACTaGCCGTCCGCTCAGACCTGCGCCTGTGTACCTCACCAGCGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: NIVLSVVEHCLCPVH*PSAQTCACVPHQRP Trigger: CGGACGCTGGTGAGGTACACAGGCGCAGGTCTGAGCGGACGGCAAGTGCACCGGACACAGGCAGTGTTCAACCACACTGAGGACTATATT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CAA 72 bp | AGGAGCTGCTCCGAGGGGGCGCACACCGACTGGGGCTaGATCTCATTGATGAGGCCATTGGCGATACTAATG | + |
|
Preference number: 6 (lower is better) Translates to: RSCSEGAHTDWG*ISLMRPLAILM Trigger: CATTAGTATCGCCAATGGCCTCATCAATGAGATCAAGCCCCAGTCGGTGTGCGCCCCCTCGGAGCAGCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS TCA 72 bp | TGTAGGTGGCCACGCGGCACGGGCCTTTGTGGGAAGTaGCATAACAGGTTTCATACTCGGAAGCCTCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRWPRGTGLCGK*HNRFHTRKPLV Trigger: CACCAGAGGCTTCCGAGTATGAAACCTGTTATGTCACTTCCCACAAAGGCCCGTGCCGCGTGGCCACCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS TCA 72 bp | TGCGCTCAGCTGTCCTGGAGTCCCAGCAGCACAGGCTaGTGGTCCTTTCGTCCGGCAGCAAAATATAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CAQLSWSPSSTG*WSFRPAAKYSP Trigger: AGGACTATATTTTGCTGCCGGACGAAAGGACCATCAGCCTGTGCTGCTGGGACTCCAGGACAGCTGAGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS GCA 72 bp | TTTGAACGTCTGCATCAAACTCCAGGTCGATCCCTGTaGCCGGGGCAACCGTGTCAGAGCGACCAATGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FERLHQTPGRSL*PGQPCQSDQWH Trigger: ATGCCATTGGTCGCTCTGACACGGTTGCCCCGGGCACAGGGATCGACCTGGAGTTTGATGCAGACGTTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
||
| CDS GCA 72 bp | CGGCAGCAAAATATAGTCCTCAGTGTGGTTGAACACTaGCTGTGTCCGGTGCACTTGCCGTCCGCTCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: RQQNIVLSVVEH*LCPVHLPSAQT Trigger: GGTCTGAGCGGACGGCAAGTGCACCGGACACAGGCAGTGTTCAACCACACTGAGGACTATATTTTGCTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS CCA 72 bp | GACCTGCGCCTGTGTACCTCACCAGCGTCCGCCCTGTaGAAATCTCCCAGAGTTTCGCTACAGAGTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: DLRLCTSPASAL*KSPRVSLQSLF Trigger: GAAAAGACTCTGTAGCGAAACTCTGGGAGATTTCCACAGGGCGGACGCTGGTGAGGTACACAGGCGCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 72 bp | TCCCTTGAGCCCGAGGCCAGGATCTGTTCTGTTGGGTaGAAAGCAAGACACGTGACTTCATCCACGTGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLEPEARICSVG*KARHVTSSTWS Trigger: CGACCACGTGGATGAAGTCACGTGTCTTGCTTTTCACCCAACAGAACAGATCCTGGCCTCGGGCTCAAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
||
| CDS TCA 72 bp | TTTCGTCCGGCAGCAAAATATAGTCCTCAGTGTGGTTaGACACTGCCTGTGTCCGGTGCACTTGCCGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: FRPAAKYSPQCG*TLPVSGALAVR Trigger: GCGGACGGCAAGTGCACCGGACACAGGCAGTGTTCAACCACACTGAGGACTATATTTTGCTGCCGGACGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS CAA 90 bp | TTCTCAAAGGTTGTGATGCAGCGGTTGGAGACGCCATCCCACAGCTaGATGCAGCCGTCCTTGCTGCCAGTGACGTACATGTTGGCACTA | + |
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Preference number: 6 (lower is better) Translates to: FSKVVMQRLETPSHS*MQPSLLPVTYMLAL Trigger: TAGTGCCAACATGTACGTCACTGGCAGCAAGGACGGCTGCATCAAGCTGTGGGATGGCGTCTCCAACCGCTGCATCACAACCTTTGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS TCA 72 bp | AAGGTGTTGATGTCATACAGGCGAAGCGTGGGATGCTaGGTTCCCACCAGGATGAAGTCTCCAGAAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: KVLMSYRRSVGC*VPTRMKSPEGW Trigger: CCACCCTTCTGGAGACTTCATCCTGGTGGGAACTCAGCATCCCACGCTTCGCCTGTATGACATCAACACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS CAA 72 bp | ACGGAGCAGATGGCATCGGTGTGCTGGTCTTGGGGATaGCAGGAGACAAAACACTGGAAGGTGTTGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: TEQMASVCWSWG*QETKHWKVLMS Trigger: TGACATCAACACCTTCCAGTGTTTTGTCTCCTGCAATCCCCAAGACCAGCACACCGATGCCATCTGCTCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS TCA 72 bp | CTTGGGGATTGCAGGAGACAAAACACTGGAAGGTGTTaGTGTCATACAGGCGAAGCGTGGGATGCTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LGDCRRQNTGRC*CHTGEAWDAEF Trigger: GAACTCAGCATCCCACGCTTCGCCTGTATGACATCAACACCTTCCAGTGTTTTGTCTCCTGCAATCCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS TCA 72 bp | CAGGTTTCATACTCGGAAGCCTCTGGTGACATTGTTTaGACGTCTGCATCAAACTCCAGGTCGATCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QVSYSEASGDIV*TSASNSRSIPV Trigger: CACAGGGATCGACCTGGAGTTTGATGCAGACGTTCAAACAATGTCACCAGAGGCTTCCGAGTATGAAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
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| CDS CAA 72 bp | ATAGTTAACGGAGCAGATGGCATCGGTGTGCTGGTCTaGGGGATTGCAGGAGACAAAACACTGGAAGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: IVNGADGIGVLV*GIAGDKTLEGV Trigger: AACACCTTCCAGTGTTTTGTCTCCTGCAATCCCCAAGACCAGCACACCGATGCCATCTGCTCCGTTAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS TCA 72 bp | CCAGGATCTGTTCTGTTGGGTGAAAAGCAAGACACGTaGCTTCATCCACGTGGTCGTAAAGAGTTCGGATCA | + |
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Preference number: 6 (lower is better) Translates to: PGSVLLGEKQDT*LHPRGRKEFGS Trigger: TGATCCGAACTCTTTACGACCACGTGGATGAAGTCACGTGTCTTGCTTTTCACCCAACAGAACAGATCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS GCA 72 bp | AGTTCGGATCACTGGGTGGTTCTCCATGTTCTGTTGTaGAGTCTCATTCATCATGACCTCAATTGGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: SSDHWVVLHVLL*SLIHHDLNWHG Trigger: GCCATGCCAATTGAGGTCATGATGAATGAGACTGCACAACAGAACATGGAGAACCACCCAGTGATCCGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS GCA 72 bp | CTTGGAATTCTTGGAGAAAATGGCAGAGCAGACTTCTaGCCCATCGTGAGCCTTCTCAAAGGTTGTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: LGILGENGRADF*PIVSLLKGCDA Trigger: TGCATCACAACCTTTGAGAAGGCTCACGATGGGGCAGAAGTCTGCTCTGCCATTTTCTCCAAGAATTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS CCA 72 bp | GACTTCATCCACGTGGTCGTAAAGAGTTCGGATCACTaGGTGGTTCTCCATGTTCTGTTGTGCAGTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: DFIHVVVKSSDH*VVLHVLLCSLI Trigger: AATGAGACTGCACAACAGAACATGGAGAACCACCCAGTGATCCGAACTCTTTACGACCACGTGGATGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS CAA 90 bp | GTGGTCGTAAAGAGTTCGGATCACTGGGTGGTTCTCCATGTTCTGTaGTGCAGTCTCATTCATCATGACCTCAATTGGCATGGCACTTTT | + |
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Preference number: 6 (lower is better) Translates to: VVVKSSDHWVVLHVL*CSLIHHDLNWHGTF Trigger: AAAAGTGCCATGCCAATTGAGGTCATGATGAATGAGACTGCACAACAGAACATGGAGAACCACCCAGTGATCCGAACTCTTTACGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS CAA 90 bp | ACTAGGATTATAGTTAACGGAGCAGATGGCATCGGTGTGCTGGTCTaGGGGATTGCAGGAGACAAAACACTGGAAGGTGTTGATGTCATA | + |
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Preference number: 6 (lower is better) Translates to: TRIIVNGADGIGVLV*GIAGDKTLEGVDVI Trigger: TATGACATCAACACCTTCCAGTGTTTTGTCTCCTGCAATCCCCAAGACCAGCACACCGATGCCATCTGCTCCGTTAACTATAATCCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS CAA 90 bp | GCCCTGTGGAAATCTCCCAGAGTTTCGCTACAGAGTCTTTTCCACTaGAGAGGATGTACTTGGAATTCTTGGAGAAAATGGCAGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ALWKSPRVSLQSLFH*RGCTWNSWRKWQSR Trigger: TCTGCTCTGCCATTTTCTCCAAGAATTCCAAGTACATCCTCTCAAGTGGAAAAGACTCTGTAGCGAAACTCTGGGAGATTTCCACAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS CAA 72 bp | CATAACAGGTTTCATACTCGGAAGCCTCTGGTGACATaGTTTGAACGTCTGCATCAAACTCCAGGTCGATCC | + |
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Preference number: 6 (lower is better) Translates to: HNRFHTRKPLVT*FERLHQTPGRS Trigger: GGATCGACCTGGAGTTTGATGCAGACGTTCAAACAATGTCACCAGAGGCTTCCGAGTATGAAACCTGTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
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| CDS CAA 90 bp | TTGCAGACGGTTTGGAATAATCGAACAATTTCAGAGTATAATCCCTaGAGCCCGAGGCCAGGATCTGTTCTGTTGGGTGAAAAGCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LQTVWNNRTISEYNP*SPRPGSVLLGEKQD Trigger: GTCTTGCTTTTCACCCAACAGAACAGATCCTGGCCTCGGGCTCAAGGGATTATACTCTGAAATTGTTCGATTATTCCAAACCGTCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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| CDS TCA 72 bp | AGTGACATAACAGGTTTCATACTCGGAAGCCTCTGGTaGCATTGTTTGAACGTCTGCATCAAACTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SDITGFILGSLW*HCLNVCIKLQV Trigger: GACCTGGAGTTTGATGCAGACGTTCAAACAATGTCACCAGAGGCTTCCGAGTATGAAACCTGTTATGTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116375.2 ENSMUST00000151511.8 |
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| CDS CAA 72 bp | AAATCTCCCAGAGTTTCGCTACAGAGTCTTTTCCACTaGAGAGGATGTACTTGGAATTCTTGGAGAAAATGG | + |
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Preference number: 6 (lower is better) Translates to: KSPRVSLQSLFH*RGCTWNSWRKW Trigger: CCATTTTCTCCAAGAATTCCAAGTACATCCTCTCAAGTGGAAAAGACTCTGTAGCGAAACTCTGGGAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116375.2 |
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