Pregenerated sensors for CSTDC4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079597

Ensembl transcript IDs: ENSMUST00000114858.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTGGTTTTCTCTTCAAGCAGTGACTTAACCTTATCAGCAATCTCCTaGATTTCTGGTGTGGCAGATCTGGCCCGTGACAAGCCTCCAGGC	+
Preference number: 5 (lower is better) Translates to: LVFSSSSDLTLSAIS*ISGVADLARDKPPG Trigger: GCCTGGAGGCTTGTCACGGGCCAGATCTGCCACACCAGAAATCCAGGAGATTGCTGATAAGGTTAAGTCACTGCTTGAAGAGAAAACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114858.2
CDS TCA 90 bp	TCTGGTAACCATGAAGTTCTAAAACATTTTCTCCAGAAATCCCTTTaGAGACCTTTATGTGGAGGAAACAACCACCACCAACATCCATCT	+
Preference number: 5 (lower is better) Translates to: SGNHEVLKHFLQKSL*RPLCGGNNHHQHPS Trigger: AGATGGATGTTGGTGGTGGTTGTTTCCTCCACATAAAGGTCTTCAAAGGGATTTCTGGAGAAAATGTTTTAGAACTTCATGGTTACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114858.2
CDS CCA 72 bp	TCTTCAAGCAGTGACTTAACCTTATCAGCAATCTCCTaGATTTCTGGTGTGGCAGATCTGGCCCGTGACAAG	+
Preference number: 6 (lower is better) Translates to: SSSSDLTLSAIS*ISGVADLARDK Trigger: CTTGTCACGGGCCAGATCTGCCACACCAGAAATCCAGGAGATTGCTGATAAGGTTAAGTCACTGCTTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114858.2

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