Pregenerated sensors for CST8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027442

Ensembl transcript IDs: ENSMUST00000028931.10, ENSMUST00000109947.2

Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR GCA 90 bp	GGGGAAAGTGTGTTGGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGCTGATCCACACCAACTaGCAGGGCCACTGGAATGAT	+
Preference number: 4 (lower is better) Translates to: GESVLVTDLNHRLLFITELIHTN*QGHWND Trigger: ATCATTCCAGTGGCCCTGGCAGTTGGTGTGGATCAG...CTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACCAACACACTTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR GCA 90 bp	GGGGAAAGTGTGTTGGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGGCCATTCCAGGGAAGTaGTCCTACCAGAAAGCTGCA	+
Preference number: 4 (lower is better) Translates to: GESVLVTDLNHRLLFITEAIPGK*SYQKAA Trigger: TGCAGCTTTCTGGTAGGAGCACTTCCCTGGAATGGC...CTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACCAACACACTTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR GCA 90 bp	GACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGCTGATCCACACCAACTaGCAGGGCCACTGGAATGAT	+
Preference number: 4 (lower is better) Translates to: DRLEPQVALYYREKQTQKLIHTN*QGHWND Trigger: ATCATTCCAGTGGCCCTGGCAGTTGGTGTGGATCAG...CTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
3UTR CAA 72 bp	GGGGAAAGTGTGTTGGTGACAGACTTGAACCACAGGTaGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGT	+
Preference number: 4 (lower is better) Translates to: GESVLVTDLNHR*LFITEKSRPRS Trigger: ACTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACCAACACACTTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR GCA 90 bp	TTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGTGGGAGGTCCAAAGTAGTTCTGTaGCTTCACTTCATTCTTGGA	+
Preference number: 4 (lower is better) Translates to: LNHRLLFITEKSRPRSGRSKVVL*LHFILG Trigger: TCCAAGAATGAAGTGAAGGCACAGAACTACTTTGGA...CCTCCCACTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CCA 90 bp	GACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGTGGGTGTTGTATTCTTTCATaGCAAACCAAACACACTGCT	+
Preference number: 4 (lower is better) Translates to: DLNHRLLFITEKSRPRSGCCILS*QTKHTA Trigger: AGCAGTGTGTTTGGTTTGCCATGAAAGAATACAACA...CCCACTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR GCA 90 bp	ACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGTTCCAAAGTAGTTCTGTaGCTTCACTTCATTCTTGGA	+
Preference number: 4 (lower is better) Translates to: TDLNHRLLFITEKSRPRSSKVVL*LHFILG Trigger: TCCAAGAATGAAGTGAAGGCACAGAACTACTTTGGA...ACTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CCA 90 bp	GTTGGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCTGTTGTATTCTTTCATaGCAAACCAAACACACTGCT	+
Preference number: 4 (lower is better) Translates to: VGDRLEPQVALYYREKQTCCILS*QTKHTA Trigger: AGCAGTGTGTTTGGTTTGCCATGAAAGAATACAACA...GGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS GCA 90 bp	GTAGTTCTGTGCCTTCACTTCATTCTTGGACTGATCCACACCAACTaGCAGGGCCACTGGAATGATGAAGAGGATCAAGGAGAGCCACAA	+
Preference number: 5 (lower is better) Translates to: VVLCLHFILGLIHTN*QGHWNDEEDQGEPQ Trigger: TTGTGGCTCTCCTTGATCCTCTTCATCATTCCAGTGGCCCTGGCAGTTGGTGTGGATCAGTCCAAGAATGAAGTGAAGGCACAGAACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	GGGGAAAGTGTGTTGGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGTTGGCATGGAGTATCTaGTCCACAAGGAAGACATAT	+
Preference number: 5 (lower is better) Translates to: GESVLVTDLNHRLLFITELAWSI*STRKTY Trigger: ATATGTCTTCCTTGTGGACAAGATACTCCATGCCAA...CTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACCAACACACTTTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	GACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGTGGGTTGGCATGGAGTATCTaGTCCACAAGGAAGACATAT	+
Preference number: 5 (lower is better) Translates to: DLNHRLLFITEKSRPRSGLAWSI*STRKTY Trigger: ATATGTCTTCCTTGTGGACAAGATACTCCATGCCAA...CCCACTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	GACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGTGGGTCCTCACTTTCCTTGTaGTATTCTTTCATGGCAAAC	+
Preference number: 5 (lower is better) Translates to: DLNHRLLFITEKSRPRSGSSLSL*YSFMAN Trigger: GTTTGCCATGAAAGAATACAACAAGGAAAGTGAGGA...CCCACTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	GGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGTTGTCCTCACTTTCCTaGTTGTATTCTTTCATGGCA	+
Preference number: 5 (lower is better) Translates to: GDRLEPQVALYYREKQTQLSSLS*LYSFMA Trigger: TGCCATGAAAGAATACAACAAGGAAAGTGAGGACAA...CTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	TTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGTGGGAGGACAAGGAAGACATATTaGTCCTCACTTTCCTTGTTG	+
Preference number: 5 (lower is better) Translates to: LNHRLLFITEKSRPRSGRTRKTY*SSLSLL Trigger: CAACAAGGAAAGTGAGGACAAATATGTCTTCCTTGT...CCTCCCACTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	GGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGGATCTGAACATCAATTaGGTATTCCATTCGGTCTGT	+
Preference number: 5 (lower is better) Translates to: GDRLEPQVALYYREKQTQDLNIN*VFHSVC Trigger: ACAGACCGAATGGAATACCAAATTGATGTTCAGATC...CTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	CTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGTGGGAGACACACTGCTTCACATaGGCATTAGAGATATTAATG	+
Preference number: 5 (lower is better) Translates to: LEPQVALYYREKQTQKWETHCFT*ALEILM Trigger: CATTAATATCTCTAATGCCAATGTGAAGCAGTGTGT...CTCCCACTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	GACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGGATCTGAACATCAATTaGGTATTCCATTCGGTCTGT	+
Preference number: 5 (lower is better) Translates to: DRLEPQVALYYREKQTQKDLNIN*VFHSVC Trigger: ACAGACCGAATGGAATACCAAATTGATGTTCAGATC...CTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	GTTGGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCACATCTTTACATTCTTaGCTCAACAGGTTGAACTCG	+
Preference number: 5 (lower is better) Translates to: VGDRLEPQVALYYREKQTTSLHS*LNRLNS Trigger: CGAGTTCAACCTGTTGAGCAAAGAATGTAAAGATGT...GGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	TTGGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCACATCTTTACATTCTTaGCTCAACAGGTTGAACTCG	+
Preference number: 5 (lower is better) Translates to: LVTDLNHRLLFITEKSRPTSLHS*LNRLNS Trigger: CGAGTTCAACCTGTTGAGCAAAGAATGTAAAGATGT...GGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	ACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGACCCAGAAGTTCCTCACTTTCCTTGTaGTATTCTTTCATGGCAAAC	+
Preference number: 5 (lower is better) Translates to: TDLNHRLLFITEKSRPRSSSLSL*YSFMAN Trigger: GTTTGCCATGAAAGAATACAACAAGGAAAGTGAGGA...ACTTCTGGGTCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	GTGTTGGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGAACAAGGAAGACATATTaGTCCTCACTTTCCTTGTTG	+
Preference number: 5 (lower is better) Translates to: VLVTDLNHRLLFITEKSRTRKTY*SSLSLL Trigger: CAACAAGGAAAGTGAGGACAAATATGTCTTCCTTGT...TCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACCAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS-3UTR CAA 90 bp	GTGTTGGTGACAGACTTGAACCACAGGTTGCTCTTTATTACAGAGAAAAGCAGAACACACTGCTTCACATaGGCATTAGAGATATTAATG	+
Preference number: 5 (lower is better) Translates to: VLVTDLNHRLLFITEKSRTHCFT*ALEILM Trigger: CATTAATATCTCTAATGCCAATGTGAAGCAGTGTGT...TCTGCTTTTCTCTGTAATAAAGAGCAACCTGTGGTTCAAGTCTGTCACCAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS CCA 72 bp	ATTCTTGGACTGATCCACACCAACTGCCAGGGCCACTaGAATGATGAAGAGGATCAAGGAGAGCCACAAGGG	+
Preference number: 6 (lower is better) Translates to: ILGLIHTNCQGH*NDEEDQGEPQG Trigger: CCCTTGTGGCTCTCCTTGATCCTCTTCATCATTCCAGTGGCCCTGGCAGTTGGTGTGGATCAGTCCAAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS CCA 72 bp	TGGATCCAAAGTAGTTCTGTGCCTTCACTTCATTCTTaGACTGATCCACACCAACTGCCAGGGCCACTGGAA	+
Preference number: 6 (lower is better) Translates to: WIQSSSVPSLHS*TDPHQLPGPLE Trigger: TTCCAGTGGCCCTGGCAGTTGGTGTGGATCAGTCCAAGAATGAAGTGAAGGCACAGAACTACTTTGGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS GCA 72 bp	GGCATTAGAGATATTAATGGATCCAAAGTAGTTCTGTaGCTTCACTTCATTCTTGGACTGATCCACACCAAC	+
Preference number: 6 (lower is better) Translates to: GIRDINGSKVVL*LHFILGLIHTN Trigger: GTTGGTGTGGATCAGTCCAAGAATGAAGTGAAGGCACAGAACTACTTTGGATCCATTAATATCTCTAATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS CAA 90 bp	TGGAGTATCTTGTCCACAAGGAAGACATATTTGTCCTCACTTTCCTaGTTGTATTCTTTCATGGCAAACCAAACACACTGCTTCACATTG	+
Preference number: 6 (lower is better) Translates to: WSILSTRKTYLSSLS*LYSFMANQTHCFTL Trigger: CAATGTGAAGCAGTGTGTTTGGTTTGCCATGAAAGAATACAACAAGGAAAGTGAGGACAAATATGTCTTCCTTGTGGACAAGATACTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS TCA 72 bp	AGATCTGAACATCAATTTGGTATTCCATTCGGTCTGTaGTCTGAAGTTTGGCATGGAGTATCTTGTCCACAA	+
Preference number: 6 (lower is better) Translates to: RSEHQFGIPFGL*SEVWHGVSCPQ Trigger: TTGTGGACAAGATACTCCATGCCAAACTTCAGATCACAGACCGAATGGAATACCAAATTGATGTTCAGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS CAA 72 bp	TTGTCCACAAGGAAGACATATTTGTCCTCACTTTCCTaGTTGTATTCTTTCATGGCAAACCAAACACACTGC	+
Preference number: 6 (lower is better) Translates to: LSTRKTYLSSLS*LYSFMANQTHC Trigger: GCAGTGTGTTTGGTTTGCCATGAAAGAATACAACAAGGAAAGTGAGGACAAATATGTCTTCCTTGTGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2
CDS GCA 72 bp	TCCTTGTTGTATTCTTTCATGGCAAACCAAACACACTaGTTCACATTGGCATTAGAGATATTAATGGATCCA	+
Preference number: 6 (lower is better) Translates to: SLLYSFMANQTH*FTLALEILMDP Trigger: TGGATCCATTAATATCTCTAATGCCAATGTGAAGCAGTGTGTTTGGTTTGCCATGAAAGAATACAACAAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028931.10 ENSMUST00000109947.2