Pregenerated sensors for CST6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024846Ensembl transcript IDs: ENSMUST00000025764.6, ENSMUST00000238111.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCTGACCCCAGGTTTTGACACCCTCCTCCTCGGAGTCCCAGCATaGACCCTGGGAGAGAGGCTGGACTGGCTCACACAGACATCCCTA | + |
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Preference number: 1 (lower is better) Translates to: LLTPGFDTLLLGVPA*TLGERLDWLTQTSL Trigger: TAGGGATGTCTGTGTGAGCCAGTCCAGCCTCTCTCCCAGGGTTCATGCTGGGACTCCGAGGAGGAGGGTGTCAAAACCTGGGGTCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CCA 90 bp | GAAAGCAGTGCAAGAAGCAGAGCTGCAGATTTATTGCAACAGACGTaGCCCGTGGCCCTGAGGCGCCTCCACCATGCTTGTTCCCATGGG | + |
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Preference number: 1 (lower is better) Translates to: ESSARSRAADLLQQT*PVALRRLHHACSHG Trigger: CCCATGGGAACAAGCATGGTGGAGGCGCCTCAGGGCCACGGGCCACGTCTGTTGCAATAAATCTGCAGCTCTGCTTCTTGCACTGCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CCA 90 bp | CTCGGCCTCCATTTCCTCCATGACGTGGCCTTTGAAGGCAGTAGATaGAACCCCAGCTGCCCTGGTGTTCATGAGGTCACAGAAGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LGLHFLHDVAFEGSR*NPSCPGVHEVTEVG Trigger: CCCCACTTCTGTGACCTCATGAACACCAGGGCAGCTGGGGTTCCATCTACTGCCTTCAAAGGCCACGTCATGGAGGAAATGGAGGCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR TCA 90 bp | GAGGCAGGTGGACCTCTCAGTTTGAGGCCAGCCTGGTCTACAGAGTaGGTGCTAAGACAGCTAGGGCTATGCAGAGAAACCCTTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: EAGGPLSLRPAWSTE*VLRQLGLCRETLPQ Trigger: CTGAGGAAGGGTTTCTCTGCATAGCCCTAGCTGTCTTAGCACTCACTCTGTAGACCAGGCTGGCCTCAAACTGAGAGGTCCACCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CCA 90 bp | GACTCATCGGAGCCCAGGCAGGATGTCCAGAGCCTGTGTCCACAGTaGGACACAATGGGACTCTTGTCTATACTGAGCATTGAGTCGAGG | + |
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Preference number: 1 (lower is better) Translates to: DSSEPRQDVQSLCPQ*DTMGLLSILSIESR Trigger: CCTCGACTCAATGCTCAGTATAGACAAGAGTCCCATTGTGTCCCACTGTGGACACAGGCTCTGGACATCCTGCCTGGGCTCCGATGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CCA 90 bp | ATGACATTGTCTGGTCCCTGTCCCTCCTGTGAGAGTGATCCCTCCTaGATAGCAGTTCTTGTCCCCTCTGGAACTCCATGGCTCAGGATC | + |
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Preference number: 1 (lower is better) Translates to: MTLSGPCPSCESDPS*IAVLVPSGTPWLRI Trigger: GATCCTGAGCCATGGAGTTCCAGAGGGGACAAGAACTGCTATCCAGGAGGGATCACTCTCACAGGAGGGACAGGGACCAGACAATGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR TCA 90 bp | TGGGACACAATGGGACTCTTGTCTATACTGAGCATTGAGTCGAGGTaGAACTCAGTTCTGGCTCAGGGGCTCCCCATCAAGGGTCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: WDTMGLLSILSIESR*NSVLAQGLPIKGQP Trigger: TGGCTGACCCTTGATGGGGAGCCCCTGAGCCAGAACTGAGTTTCACCTCGACTCAATGCTCAGTATAGACAAGAGTCCCATTGTGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR TCA 90 bp | GTGTCCACAGTGGGACACAATGGGACTCTTGTCTATACTGAGCATTaGGTCGAGGTGAAACTCAGTTCTGGCTCAGGGGCTCCCCATCAA | + |
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Preference number: 1 (lower is better) Translates to: VSTVGHNGTLVYTEH*VEVKLSSGSGAPHQ Trigger: TTGATGGGGAGCCCCTGAGCCAGAACTGAGTTTCACCTCGACTCAATGCTCAGTATAGACAAGAGTCCCATTGTGTCCCACTGTGGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR TCA 90 bp | AGGGCCCATGGAGTTGAGCAGCCATCTTACACAACTGTTTGGTACTaGGAGTTCAGCAGGATAGGGGCTTCCCTTCACAAGCTAGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: RAHGVEQPSYTTVWY*EFSRIGASLHKLAD Trigger: ATCAGCTAGCTTGTGAAGGGAAGCCCCTATCCTGCTGAACTCTCAGTACCAAACAGTTGTGTAAGATGGCTGCTCAACTCCATGGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CCA 90 bp | GTGACAAGGACCAGTTGCTTTTGGGAGAGGGCCAAAGACAATGAATaGCTACTTCTGCCCAGCTGCTTTAAGGCTCAGATGAGTCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: VTRTSCFWERAKDNE*LLLPSCFKAQMSPK Trigger: CTTGGGACTCATCTGAGCCTTAAAGCAGCTGGGCAGAAGTAGCCATTCATTGTCTTTGGCCCTCTCCCAAAAGCAACTGGTCCTTGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR TCA 90 bp | ATGCCTTTAATCCCAGTACTGGAGAATCAGAGGCAGGTGGAACTGTaGGTTCCAGGACAGCCAAGGCTACACACAGAGAAATCCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: MPLIPVLENQRQVEL*VPGQPRLHTEKSCL Trigger: AAGACAGGATTTCTCTGTGTGTAGCCTTGGCTGTCCTGGAACTCACAGTTCCACCTGCCTCTGATTCTCCAGTACTGGGATTAAAGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CCA 90 bp | TCATGCCCAGGAATACATAAAGCAGAGGAAATACCATCTGGGATTTaGGCACTGATTCCAGGGGTGGAGAAGCCACTAGAGACAGATGTC | + |
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Preference number: 1 (lower is better) Translates to: SCPGIHKAEEIPSGI*ALIPGVEKPLETDV Trigger: GACATCTGTCTCTAGTGGCTTCTCCACCCCTGGAATCAGTGCCCAAATCCCAGATGGTATTTCCTCTGCTTTATGTATTCCTGGGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CCA 90 bp | TGGAGGTTGGAGACTGGTGGTTTGACCAACACCCACACACACCATTaGTTTGTTCCAGGCAGCAGTTCTTTCTCCAGAAACTTAAGACAG | + |
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Preference number: 1 (lower is better) Translates to: WRLETGGLTNTHTHH*FVPGSSSFSRNLRQ Trigger: CTGTCTTAAGTTTCTGGAGAAAGAACTGCTGCCTGGAACAAACCAATGGTGTGTGTGGGTGTTGGTCAAACCACCAGTCTCCAACCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR TCA 90 bp | AAGAAATTTACAAAGAATCTAACACCTGCTTCCTTCAGTCCAACATaGCATTGTCTGGTCCCTGTCCCTCCTGTGAGAGTGATCCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: KKFTKNLTPASFSPT*HCLVPVPPVRVIPP Trigger: AGGAGGGATCACTCTCACAGGAGGGACAGGGACCAGACAATGTCATGTTGGACTGAAGGAAGCAGGTGTTAGATTCTTTGTAAATTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CCA 90 bp | TTCAACAAGTATTTCCTGTCACCTGCCCTATACTGGCTCCATGCTTaGTATCTTCTAGTTGATGGAACTTGGGAAACCTTCCAAGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: FNKYFLSPALYWLHA*YLLVDGTWETFQAV Trigger: CACTGCTTGGAAGGTTTCCCAAGTTCCATCAACTAGAAGATACCAAGCATGGAGCCAGTATAGGGCAGGTGACAGGAAATACTTGTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR GCA 90 bp | AACAAGAATTACAACTACAAAGAAATTTACAAAGAATCTAACACCTaGTTCCTTCAGTCCAACATGACATTGTCTGGTCCCTGTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: NKNYNYKEIYKESNT*FLQSNMTLSGPCPS Trigger: GGAGGGACAGGGACCAGACAATGTCATGTTGGACTGAAGGAAGCAGGTGTTAGATTCTTTGTAAATTTCTTTGTAGTTGTAATTCTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | CTGATTCCAGGGGTGGAGAAGCCACTAGAGACAGATGTCCTGACTCTTGCCTCCGTTCCCATGGGGCCCTaGCTCTGTCACCCTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LIPGVEKPLETDVLTLASVPMGP*LCHPGA Trigger: GGCCCCAGGGTGACAGAGTCAGGGCCCCATGGGAAC...GGAGGCAAGAGTCAGGACATCTGTCTCTAGTGGCTTCTCCACCCCTGGAATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | CAGATGAGTCCCAAGGGTCTGACTCATCGGAGCCCAGGCAGGATGTCCAGAGCCGTCAGGTTTCCCAGGTaGCACTCGGCCTCCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: QMSPKGLTHRSPGRMSRAVRFPR*HSASIS Trigger: GGAAATGGAGGCCGAGTGTCACCTGGGAAACCTGAC...GGCTCTGGACATCCTGCCTGGGCTCCGATGAGTCAGACCCTTGGGACTCATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | CAGATGAGTCCCAAGGGTCTGACTCATCGGAGCCCAGGCAGGATGTCCAGAGCCCTTCAAAGCAACTGGTaGCTATGGCCTGTCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QMSPKGLTHRSPGRMSRALQSNW*LWPVPR Trigger: CCTGGGGACAGGCCATAGTCACCAGTTGCTTTGAAG...GGCTCTGGACATCCTGCCTGGGCTCCGATGAGTCAGACCCTTGGGACTCATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | CTGATTCCAGGGGTGGAGAAGCCACTAGAGACAGATGTCCTGACTCTTGCCTCCCATGCCCATAAGGCCTaGTGTCGGGGCCTTAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LIPGVEKPLETDVLTLASHAHKA*CRGLRG Trigger: CCCTCTAAGGCCCCGACACCAGGCCTTATGGGCATG...GGAGGCAAGAGTCAGGACATCTGTCTCTAGTGGCTTCTCCACCCCTGGAATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | TCAGTTCTGGCTCAGGGGCTCCCCATCAAGGGTCAGCCATCTTCCATCATTTCTCCCCTGGGAAGGATGTaGGGGGTGTGTACTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SVLAQGLPIKGQPSSIISPLGRM*GVCTGF Trigger: GAAGCCAGTACACACCCCTCACATCCTTCCCAGGGG...AGAAATGATGGAAGATGGCTGACCCTTGATGGGGAGCCCCTGAGCCAGAACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | GTGAAACTCAGTTCTGGCTCAGGGGCTCCCCATCAAGGGTCAGCCATCTTCCATCCCTGGGAGAGAGGCTaGACTGGCTCACACAGACAT | + |
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Preference number: 2 (lower is better) Translates to: VKLSSGSGAPHQGSAIFHPWERG*TGSHRH Trigger: ATGTCTGTGTGAGCCAGTCCAGCCTCTCTCCCAGGG...ATGGAAGATGGCTGACCCTTGATGGGGAGCCCCTGAGCCAGAACTGAGTTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | AAGTCACCTCCAGCTGCCAGTACATACGAGAATCTTTGTGAGCTGGAAACCCAGGGAGGCGGAGGCAGGTaGACCTCTCAGTTTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KSPPAASTYENLCELETQGGGGR*TSQFEA Trigger: GGCCTCAAACTGAGAGGTCCACCTGCCTCCGCCTCC...CTGGGTTTCCAGCTCACAAAGATTCTCGTATGTACTGGCAGCTGGAGGTGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | CTGATTCCAGGGGTGGAGAAGCCACTAGAGACAGATGTCCTGACTCTTGCCTCCGAGGGTCAGGGTGAGTaGAACACACAGGAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LIPGVEKPLETDVLTLASEGQGE*NTQEKA Trigger: TGCTTTCTCCTGTGTGTTTCACTCACCCTGACCCTC...GGAGGCAAGAGTCAGGACATCTGTCTCTAGTGGCTTCTCCACCCCTGGAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGGTGCTCTTTGCTGCTTCACCATTTGAGGGCAATAACAAGAGCTGTGTCGCTTTGCGACCCTCCTaGCCCCAGGTTTTGACACCC | + |
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Preference number: 2 (lower is better) Translates to: WLVLFAASPFEGNNKSCVALRPS*PQVLTP Trigger: GGGTGTCAAAACCTGGGGTCAGGAGGGTCGCAAAGC...GACACAGCTCTTGTTATTGCCCTCAAATGGTGAAGCAGCAAAGAGCACCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR GCA 90 bp | TCAGTTCTGGCTCAGGGGCTCCCCATCAAGGGTCAGCCATCTTCCATCATTTCTCCCTACCCTCAGTACTaGCTCAGAGGGATCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SVLAQGLPIKGQPSSIISPYPQY*LRGISR Trigger: CCTACTGATCCCTCTGAGGCAGTACTGAGGGTAGGG...AGAAATGATGGAAGATGGCTGACCCTTGATGGGGAGCCCCTGAGCCAGAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | CTGATTCCAGGGGTGGAGAAGCCACTAGAGACAGATGTCCTGACTCTTGCCTCCTGTGTGCATTCTGCCTaGTGCCTCTGCTTCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LIPGVEKPLETDVLTLASCVHSA*CLCFCL Trigger: GAGACAGAAGCAGAGGCACCAGGCAGAATGCACACA...GGAGGCAAGAGTCAGGACATCTGTCTCTAGTGGCTTCTCCACCCCTGGAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGCTGCCCTGGTGTTCATaGGGTCACAGAAGTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LKVTDITFPTEVSRTTLVLPWCS*GHRSGV Trigger: CACCCCACTTCTGTGACCTCATGAACACCAGGGCAG...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGGGGACTGGACTGGATTaGAGACTGCTTGGAGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LKVTDITFPTEVSRTTLVGTGLD*RLLGGP Trigger: GGGACCTCCAAGCAGTCTCCAATCCAGTCCAGTCCC...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | AGAATCAGAGGCAGGTGGAACTGTGAGTTCCAGGACAGCCAAGGCTACACACAGTTTGAAGGCAGTAGATaGAACCCCAGCTGCCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RIRGRWNCEFQDSQGYTQFEGSR*NPSCPG Trigger: ACCAGGGCAGCTGGGGTTCCATCTACTGCCTTCAAA...CTGTGTGTAGCCTTGGCTGTCCTGGAACTCACAGTTCCACCTGCCTCTGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | GCAGTTCCCAGTACCCACATCAGACTGCTTACAGCCACCTGTAACTCAGATCTATGGAGACTGGTGGTTTaGCCAACACCCACACACACC | + |
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Preference number: 2 (lower is better) Translates to: AVPSTHIRLLTATCNSDLWRLVV*PTPTHT Trigger: GGTGTGTGTGGGTGTTGGTCAAACCACCAGTCTCCA...TAGATCTGAGTTACAGGTGGCTGTAAGCAGTCTGATGTGGGTACTGGGAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGGCTGAGTTGGAATGGTaGGTGCCTGTGATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LKVTDITFPTEVSRTTLVAELEW*VPVIPA Trigger: TGCTGGGATCACAGGCACGCACCATTCCAACTCAGC...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGAGATGGAACCCCAGCTaGCCTGGTGTTCATGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LKVTDITFPTEVSRTTLVRWNPS*PGVHEV Trigger: GACCTCATGAACACCAGGGCAGCTGGGGTTCCATCT...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | GTCTACAAAATGAGTTCCACAACAGCCAGAGCTACACACAGACACCCTGTCTTGCCATGCTTGTTCCCATaGGGCCCTGACTCTGTCACC | + |
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Preference number: 2 (lower is better) Translates to: VYKMSSTTARATHRHPVLPCLFP*GPDSVT Trigger: GGTGACAGAGTCAGGGCCCCATGGGAACAAGCATGG...CAAGACAGGGTGTCTGTGTGTAGCTCTGGCTGTTGTGGAACTCATTTTGTAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | AGAATCAGAGGCAGGTGGAACTGTGAGTTCCAGGACAGCCAAGGCTACACACAGCAATCTAGAGGGTTGTaGAGGTTGGAGACTGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RIRGRWNCEFQDSQGYTQQSRGL*RLETGG Trigger: ACCACCAGTCTCCAACCTCCACAACCCTCTAGATTG...CTGTGTGTAGCCTTGGCTGTCCTGGAACTCACAGTTCCACCTGCCTCTGATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | AGAATCAGAGGCAGGTGGAACTGTGAGTTCCAGGACAGCCAAGGCTACACACAGATACGAGAATCTTTGTaGGCTGGAAACCCAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RIRGRWNCEFQDSQGYTQIRESL*AGNPVL Trigger: CAGGACTGGGTTTCCAGCTCACAAAGATTCTCGTAT...CTGTGTGTAGCCTTGGCTGTCCTGGAACTCACAGTTCCACCTGCCTCTGATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | ATCAGAGGCAGGTGGAACTGTGAGTTCCAGGACAGCCAAGGCTACACACAGAGAAAACCTTCCAAGCAGTaGCTGCATAGCACAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: IRGRWNCEFQDSQGYTQRKPSKQ*LHSTNC Trigger: GCAGTTTGTGCTATGCAGTCACTGCTTGGAAGGTTT...TCTCTGTGTGTAGCCTTGGCTGTCCTGGAACTCACAGTTCCACCTGCCTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | GTCTACAAAATGAGTTCCACAACAGCCAGAGCTACACACAGACACCCTGTCTTGGTGAGGGGTGTGTACTaGCTTCATGACCTCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: VYKMSSTTARATHRHPVLVRGVY*LHDLWP Trigger: AGGCCAGAGGTCATGAAGCCAGTACACACCCCTCAC...CAAGACAGGGTGTCTGTGTGTAGCTCTGGCTGTTGTGGAACTCATTTTGTAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGATGAGGTCACAGAAGTaGGGTGGGAGAGTCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: LKVTDITFPTEVSRTTLVMRSQK*GGRVRQ Trigger: CTGTCTGACTCTCCCACCCCACTTCTGTGACCTCAT...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTACCGAGATATGAAAGGCTTTGCTGCTGTCGCAGAATGTACCTTGCTAAAATCAGCTGTGGGGTTCTaGGAGTCACTGGGAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SYRDMKGFAAVAECTLLKSAVGF*ESLGAE Trigger: CTCTGCTCCCAGTGACTCTCAGAACCCCACAGCTGA...TTTTAGCAAGGTACATTCTGCGACAGCAGCAAAGCCTTTCATATCTCGGTAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR GCA 90 bp | GTGAAACTCAGTTCTGGCTCAGGGGCTCCCCATCAAGGGTCAGCCATCTTCCATAGATATGAAAGGCTTTaGTGCTGTCGCAGAATGTAC | + |
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Preference number: 2 (lower is better) Translates to: VKLSSGSGAPHQGSAIFHRYERL*CCRRMY Trigger: GTACATTCTGCGACAGCAGCAAAGCCTTTCATATCT...ATGGAAGATGGCTGACCCTTGATGGGGAGCCCCTGAGCCAGAACTGAGTTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | AGAATCAGAGGCAGGTGGAACTGTGAGTTCCAGGACAGCCAAGGCTACACACAGCTAGTTGATGGAACTTaGGAAACCTTCCAAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RIRGRWNCEFQDSQGYTQLVDGT*ETFQAV Trigger: CACTGCTTGGAAGGTTTCCCAAGTTCCATCAACTAG...CTGTGTGTAGCCTTGGCTGTCCTGGAACTCACAGTTCCACCTGCCTCTGATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | GTCTACAAAATGAGTTCCACAACAGCCAGAGCTACACACAGACACCCTGTCTTGAGTTCTTGTCCCCTCTaGAACTCCATGGCTCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: VYKMSSTTARATHRHPVLSSCPL*NSMAQD Trigger: ATCCTGAGCCATGGAGTTCCAGAGGGGACAAGAACT...CAAGACAGGGTGTCTGTGTGTAGCTCTGGCTGTTGTGGAACTCATTTTGTAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTCCCAGTACCCACATCAGACTGCTTACAGCCACCTGTAACTCAGATCTAAGGACCAGTTGCTTTTaGGAGAGGGCCAAAGACAAT | + |
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Preference number: 2 (lower is better) Translates to: AVPSTHIRLLTATCNSDLRTSCF*ERAKDN Trigger: ATTGTCTTTGGCCCTCTCCCAAAAGCAACTGGTCCT...TAGATCTGAGTTACAGGTGGCTGTAAGCAGTCTGATGTGGGTACTGGGAACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 90 bp | AACCATATTGCTCTTAGTAGAGGCCAATCTAGAGGGTTGTGGAGGTaGGAGACTGGTGGTTTGACCAACACCCACACACACCATTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: NHIALSRGQSRGLWR*ETGGLTNTHTHHWF Trigger: AAACCAATGGTGTGTGTGGGTGTTGGTCAAACCACCAGTCTCCAACCTCCACAACCCTCTAGATTGGCCTCTACTAAGAGCAATATGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR-3UTR TCA 90 bp | TCAGGATCATTTAGGAATCTTTCCCAGAGCAAAACTCTGAGAAAGTACCCCTGGCCAGCTACCGAGATATaGAAGGCTTTGCTGCTGTCG | + |
|
Preference number: 2 (lower is better) Translates to: SGSFRNLSQSKTLRKYPWPATEI*KALLLS Trigger: CGACAGCAGCAAAGCCTTTCATATCTCGGTAGCTGG...CCAGGGGTACTTTCTCAGAGTTTTGCTCTGGGAAAGATTCCTAAATGATCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CCA 90 bp | AGAATCAGAGGCAGGTGGAACTGTGAGTTCCAGGACAGCCAAGGCTACACACAGCCCCCAATATATATGTaGTCAAATGTTCCAGACATG | + |
|
Preference number: 2 (lower is better) Translates to: RIRGRWNCEFQDSQGYTQPPIYM*SNVPDM Trigger: CATGTCTGGAACATTTGACCACATATATATTGGGGG...CTGTGTGTAGCCTTGGCTGTCCTGGAACTCACAGTTCCACCTGCCTCTGATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGAGAGGAAATACCATCTaGGATTTGGGCACTGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: LKVTDITFPTEVSRTTLVRGNTI*DLGTDS Trigger: GGAATCAGTGCCCAAATCCCAGATGGTATTTCCTCT...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CAA 90 bp | ATTTACAAAGAATCTAACACCTGCTTCCTTCAGTCCAACATGACATaGTCTGGTCCCTGTCCCTCCTGTGAGAGTGATCCCTCCTGGATA | + |
|
Preference number: 2 (lower is better) Translates to: IYKESNTCFLQSNMT*SGPCPSCESDPSWI Trigger: TATCCAGGAGGGATCACTCTCACAGGAGGGACAGGGACCAGACAATGTCATGTTGGACTGAAGGAAGCAGGTGTTAGATTCTTTGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CAA 90 bp | TTTAACCCAAGCATTTGGGAGGCAGAGGCAAATGGATCTCTGAGTTaGAGGTCTGGTCTACAAAATGAGTTCCACAACAGCCAGAGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: FNPSIWEAEANGSLS*RSGLQNEFHNSQSY Trigger: GTAGCTCTGGCTGTTGTGGAACTCATTTTGTAGACCAGACCTCAAACTCAGAGATCCATTTGCCTCTGCCTCCCAAATGCTTGGGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR TCA 90 bp | GTCTACAAAATGAGTTCCACAACAGCCAGAGCTACACACAGACACCCTGTCTTGGTCTATACTGAGCATTaGGTCGAGGTGAAACTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VYKMSSTTARATHRHPVLVYTEH*VEVKLS Trigger: ACTGAGTTTCACCTCGACTCAATGCTCAGTATAGAC...CAAGACAGGGTGTCTGTGTGTAGCTCTGGCTGTTGTGGAACTCATTTTGTAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGTTGGTATCTTCTAGTTaGTGGAACTTGGGAAACCTT | + |
|
Preference number: 2 (lower is better) Translates to: LKVTDITFPTEVSRTTLVLVSSS*WNLGNL Trigger: AAGGTTTCCCAAGTTCCATCAACTAGAAGATACCAA...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGTGTAGTCTGAGAACTTaGCATTCCCCCAATATATAT | + |
|
Preference number: 2 (lower is better) Translates to: LKVTDITFPTEVSRTTLVCSLRT*HSPNIY Trigger: ATATATATTGGGGGAATGTCAAGTTCTCAGACTACA...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR GCA 72 bp | ACAGACGTGGCCCGTGGCCCTGAGGCGCCTCCACCATaGTTGTTCCCATGGGGCCCTGACTCTGTCACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TDVARGPEAPPP*LFPWGPDSVTL Trigger: CAGGGTGACAGAGTCAGGGCCCCATGGGAACAAGCATGGTGGAGGCGCCTCAGGGCCACGGGCCACGTCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | CCAGGTTTTGACACCCTCCTCCTCGGAGTCCCAGCATaGACCCTGGGAGAGAGGCTGGACTGGCTCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: PGFDTLLLGVPA*TLGERLDWLTQ Trigger: CTGTGTGAGCCAGTCCAGCCTCTCTCCCAGGGTTCATGCTGGGACTCCGAGGAGGAGGGTGTCAAAACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR GCA 72 bp | GACGTGGCCTTTGAAGGCAGTAGATGGAACCCCAGCTaGCCTGGTGTTCATGAGGTCACAGAAGTGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DVAFEGSRWNPS*PGVHEVTEVGW Trigger: CCACCCCACTTCTGTGACCTCATGAACACCAGGGCAGCTGGGGTTCCATCTACTGCCTTCAAAGGCCACGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | GCAAGAAGCAGAGCTGCAGATTTATTGCAACAGACGTaGCCCGTGGCCCTGAGGCGCCTCCACCATGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ARSRAADLLQQT*PVALRRLHHAC Trigger: ACAAGCATGGTGGAGGCGCCTCAGGGCCACGGGCCACGTCTGTTGCAATAAATCTGCAGCTCTGCTTCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTTCCCAGTACCCACATCAGACTGCTTACAGCCACCTGTAACTCAGATCTAGCGCCTCCACCATGCTaGTTCCCATGGGGCCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: AVPSTHIRLLTATCNSDLAPPPC*FPWGPD Trigger: GTCAGGGCCCCATGGGAACAAGCATGGTGGAGGCGC...TAGATCTGAGTTACAGGTGGCTGTAAGCAGTCTGATGTGGGTACTGGGAACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | TCAAATCCAGTCCCTCGGTGTGTCAGGTTTCCCAGGTaGCACTCGGCCTCCATTTCCTCCATGACGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SNPVPRCVRFPR*HSASISSMTWP Trigger: AGGCCACGTCATGGAGGAAATGGAGGCCGAGTGTCACCTGGGAAACCTGACACACCGAGGGACTGGATTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | TCTGGTCCCTGTCCCTCCTGTGAGAGTGATCCCTCCTaGATAGCAGTTCTTGTCCCCTCTGGAACTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SGPCPSCESDPS*IAVLVPSGTPW Trigger: CCATGGAGTTCCAGAGGGGACAAGAACTGCTATCCAGGAGGGATCACTCTCACAGGAGGGACAGGGACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | GAGACCACTGAAAATGTCTGGAAGAGGGGCTTCCTCTaGGGACCCTACCCTCAGTACTGCCTCAGAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: ETTENVWKRGFL*GPYPQYCLRGI Trigger: GATCCCTCTGAGGCAGTACTGAGGGTAGGGTCCTCAGAGGAAGCCCCTCTTCCAGACATTTTCAGTGGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | ACCCCAGCTGCCCTGGTGTTCATGAGGTCACAGAAGTaGGGTGGGAGAGTCAGACAGGAACAAGTTAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TPAALVFMRSQK*GGRVRQEQVRC Trigger: ACACCTAACTTGTTCCTGTCTGACTCTCCCACCCCACTTCTGTGACCTCATGAACACCAGGGCAGCTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGGTGCCTCTGCTTCTGTCTCTAGGCTGTGTTGCTAGCATCTTCAGGACACAGTCCAACATGACATaGTCTGGTCCCTGTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CLVPLLLSLGCVASIFRTQSNMT*SGPCPS Trigger: GGAGGGACAGGGACCAGACAATGTCATGTTGGACTG...TGTCCTGAAGATGCTAGCAACACAGCCTAGAGACAGAAGCAGAGGCACCAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | GAGAGTCACTGGGAGCAGAGTGAGGGTCAGGGTGAGTaGAACACACAGGAGAAAGCAGTGCAAGAAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ESHWEQSEGQGE*NTQEKAVQEAE Trigger: CTCTGCTTCTTGCACTGCTTTCTCCTGTGTGTTTCACTCACCCTGACCCTCACTCTGCTCCCAGTGACTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | TATGTGGTCAAATGTTCCAGACATGCTGAGTTGGAATaGTGCGTGCCTGTGATCCCAGCACTTGGGAGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: YVVKCSRHAELE*CVPVIPALGRR Trigger: CCGCCTCCCAAGTGCTGGGATCACAGGCACGCACCATTCCAACTCAGCATGTCTGGAACATTTGACCACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | CTTCACAAGCTAGCTGATGAGGGGACTGGACTGGATTaGAGACTGCTTGGAGGTCCCTCATGTAGCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LHKLADEGTGLD*RLLGGPSCSHS Trigger: ACTGTGGCTACATGAGGGACCTCCAAGCAGTCTCCAATCCAGTCCAGTCCCCTCATCAGCTAGCTTGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | CTCCAGCTGCCAGTACATACGAGAATCTTTGTGAGCTaGAAACCCAGTCCTGTAGGGCCCATGGAGTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQLPVHTRIFVS*KPSPVGPMELS Trigger: GCTCAACTCCATGGGCCCTACAGGACTGGGTTTCCAGCTCACAAAGATTCTCGTATGTACTGGCAGCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | GAAAGTACCCCTGGGAAGGATGTGAGGGGTGTGTACTaGCTTCATGACCTCTGGCCTAAGGAACTCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ESTPGKDVRGVY*LHDLWPKELRR Trigger: TCTCCTGAGTTCCTTAGGCCAGAGGTCATGAAGCCAGTACACACCCCTCACATCCTTCCCAGGGGTACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCCATGGAGTTGAGCAGCCATCTTACACAACTGTTTGGTACTGAGAGTTCAGGTGGACCTCTCAGTTaGAGGCCAGCCTGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: GPMELSSHLTQLFGTESSGGPLS*RPAWST Trigger: TGTAGACCAGGCTGGCCTCAAACTGAGAGGTCCACC...TGAACTCTCAGTACCAAACAGTTGTGTAAGATGGCTGCTCAACTCCATGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | CCTCTTATCCTTCTAGTGGATGGAGACAGGGCCATGTaGCAAGGACCAGTTGCTTTTGGGAGAGGGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PLILLVDGDRAM*QGPVAFGRGPK Trigger: CTTTGGCCCTCTCCCAAAAGCAACTGGTCCTTGTCACATGGCCCTGTCTCCATCCACTAGAAGGATAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTTCCCAGTACCCACATCAGACTGCTTACAGCCACCTGTAACTCAGATCTAGCTGGCTGGTGCTCTTaGCTGCTTCACCATTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AVPSTHIRLLTATCNSDLAGWCS*LLHHLR Trigger: CCTCAAATGGTGAAGCAGCAAAGAGCACCAGCCAGC...TAGATCTGAGTTACAGGTGGCTGTAAGCAGTCTGATGTGGGTACTGGGAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAACTCAGTTCTGGCTCAGGGGCTCCCCATCAAGGGTCAGCCATCTTCCATTTGCTGCTTCACCATTaGAGGGCAATAACAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VKLSSGSGAPHQGSAIFHLLLHH*RAITRA Trigger: AGCTCTTGTTATTGCCCTCAAATGGTGAAGCAGCAA...ATGGAAGATGGCTGACCCTTGATGGGGAGCCCCTGAGCCAGAACTGAGTTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGGTAGGGCCCATGGAGTaGAGCAGCCATCTTACACAA | + |
|
Preference number: 3 (lower is better) Translates to: LKVTDITFPTEVSRTTLVVGPME*SSHLTQ Trigger: TTGTGTAAGATGGCTGCTCAACTCCATGGGCCCTAC...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTTCCCAGTACCCACATCAGACTGCTTACAGCCACCTGTAACTCAGATCTAGATGTAAATGCTGGCTaGGAGGGAGGGGTGCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: AVPSTHIRLLTATCNSDLDVNAG*EGGVLY Trigger: ATACAGCACCCCTCCCTCCAAGCCAGCATTTACATC...TAGATCTGAGTTACAGGTGGCTGTAAGCAGTCTGATGTGGGTACTGGGAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | ATGGGACTCTTGTCTATACTGAGCATTGAGTCGAGGTaGAACTCAGTTCTGGCTCAGGGGCTCCCCATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: MGLLSILSIESR*NSVLAQGLPIK Trigger: CTTGATGGGGAGCCCCTGAGCCAGAACTGAGTTTCACCTCGACTCAATGCTCAGTATAGACAAGAGTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR GCA 72 bp | AGGGCCAAAGACAATGAATGGCTACTTCTGCCCAGCTaGTTTAAGGCTCAGATGAGTCCCAAGGGTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: RAKDNEWLLLPS*FKAQMSPKGLT Trigger: AGTCAGACCCTTGGGACTCATCTGAGCCTTAAAGCAGCTGGGCAGAAGTAGCCATTCATTGTCTTTGGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR GCA 72 bp | AGTGGATGGAGACAGGGCCATGTGACAAGGACCAGTTaGTTTTGGGAGAGGGCCAAAGACAATGAATGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SGWRQGHVTRTS*FWERAKDNEWL Trigger: TAGCCATTCATTGTCTTTGGCCCTCTCCCAAAAGCAACTGGTCCTTGTCACATGGCCCTGTCTCCATCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR GCA 72 bp | CTCAGATCTAAAGGACCCGCTGGTCTCCGTGGGCACTaGACTCACATGTACAATCCACACACAGAGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRSKGPAGLRGH*THMYNPHTETK Trigger: TTTTGTCTCTGTGTGTGGATTGTACATGTGAGTGCAGTGCCCACGGAGACCAGCGGGTCCTTTAGATCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | TGGAGACAGGGCCATGTGACAAGGACCAGTTGCTTTTaGGAGAGGGCCAAAGACAATGAATGGCTACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WRQGHVTRTSCF*ERAKDNEWLLL Trigger: CAGAAGTAGCCATTCATTGTCTTTGGCCCTCTCCCAAAAGCAACTGGTCCTTGTCACATGGCCCTGTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGAGGCAGGTGGAACTGTGAGTTCCAGGACAGCCAAGGCTACACACAGAGAGACACAATGGGACTCTaGTCTATACTGAGCATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IRGRWNCEFQDSQGYTQRDTMGL*SILSIE Trigger: CTCAATGCTCAGTATAGACAAGAGTCCCATTGTGTC...TCTCTGTGTGTAGCCTTGGCTGTCCTGGAACTCACAGTTCCACCTGCCTCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | GTCCACAGTGGGACACAATGGGACTCTTGTCTATACTaGGCATTGAGTCGAGGTGAAACTCAGTTCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VHSGTQWDSCLY*ALSRGETQFWL Trigger: GAGCCAGAACTGAGTTTCACCTCGACTCAATGCTCAGTATAGACAAGAGTCCCATTGTGTCCCACTGTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | GAGACTGGTGGTTTGACCAACACCCACACACACCATTaGTTTGTTCCAGGCAGCAGTTCTTTCTCCAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ETGGLTNTHTHH*FVPGSSSFSRN Trigger: GTTTCTGGAGAAAGAACTGCTGCCTGGAACAAACCAATGGTGTGTGTGGGTGTTGGTCAAACCACCAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | CATATTGCTCTTAGTAGAGGCCAATCTAGAGGGTTGTaGAGGTTGGAGACTGGTGGTTTGACCAACACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HIALSRGQSRGL*RLETGGLTNTH Trigger: GTGGGTGTTGGTCAAACCACCAGTCTCCAACCTCCACAACCCTCTAGATTGGCCTCTACTAAGAGCAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | ACCAGTTGCTTTTGGGAGAGGGCCAAAGACAATGAATaGCTACTTCTGCCCAGCTGCTTTAAGGCTCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: TSCFWERAKDNE*LLLPSCFKAQM Trigger: CATCTGAGCCTTAAAGCAGCTGGGCAGAAGTAGCCATTCATTGTCTTTGGCCCTCTCCCAAAAGCAACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGGTCACTGACATCACCTTCCCCACTGAAGTGAGCCGCACAACCTTAGTGACACACACCATTGGTTaGTTCCAGGCAGCAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LKVTDITFPTEVSRTTLVTHTIG*FQAAVL Trigger: AAGAACTGCTGCCTGGAACAAACCAATGGTGTGTGT...CACTAAGGTTGTGCGGCTCACTTCAGTGGGGAAGGTGATGTCAGTGACCTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | CCCCAATATATATGTGGTCAAATGTTCCAGACATGCTaGGTTGGAATGGTGCGTGCCTGTGATCCCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: PQYICGQMFQTC*VGMVRACDPST Trigger: AGTGCTGGGATCACAGGCACGCACCATTCCAACTCAGCATGTCTGGAACATTTGACCACATATATATTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | GGTGTCGGGGCCTTAGAGGGCTGTAGTCTGAGAACTTaGCATTCCCCCAATATATATGTGGTCAAATGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GVGALEGCSLRT*HSPNIYVVKCS Trigger: GGAACATTTGACCACATATATATTGGGGGAATGTCAAGTTCTCAGACTACAGCCCTCTAAGGCCCCGACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | ACAAAGAATCTAACACCTGCTTCCTTCAGTCCAACATaGCATTGTCTGGTCCCTGTCCCTCCTGTGAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TKNLTPASFSPT*HCLVPVPPVRV Trigger: CACTCTCACAGGAGGGACAGGGACCAGACAATGTCATGTTGGACTGAAGGAAGCAGGTGTTAGATTCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | CAAGTTAGGTGTGAGACCTTTCTTAGGAAGGAAGTGTaGGATAGTGAAGAGTGGCTGTCTGGTTACCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QVRCETFLRKEV*DSEEWLSGYPP Trigger: GGGAGGGTAACCAGACAGCCACTCTTCACTATCTCACACTTCCTTCCTAAGAAAGGTCTCACACCTAACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | TGCCCTATACTGGCTCCATGCTTGGTATCTTCTAGTTaGTGGAACTTGGGAAACCTTCCAAGCAGTGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: CPILAPCLVSSS*WNLGNLPSSDC Trigger: GCAGTCACTGCTTGGAAGGTTTCCCAAGTTCCATCAACTAGAAGATACCAAGCATGGAGCCAGTATAGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR GCA 72 bp | TCATCTCTGGGTTACTTAATGCTTCTCCAATGTGTGTaGATTCTGCCTGGTGCCTCTGCTTCTGTCTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSLGYLMLLQCV*ILPGASASVSR Trigger: CCTAGAGACAGAAGCAGAGGCACCAGGCAGAATGCACACACATTGGAGAAGCATTAAGTAACCCAGAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR CCA 72 bp | GGAATACATAAAGCAGAGGAAATACCATCTGGGATTTaGGCACTGATTCCAGGGGTGGAGAAGCCACTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GIHKAEEIPSGI*ALIPGVEKPLE Trigger: CTCTAGTGGCTTCTCCACCCCTGGAATCAGTGCCCAAATCCCAGATGGTATTTCCTCTGCTTTATGTATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR GCA 72 bp | AAGCAACTGGTGACTATGGCCTGTCCCCAGGTTAGATaGATGTTGGTGTATCTGAACAAGACTTCTGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: KQLVTMACPQVR*MLVYLNKTSGC Trigger: ACATCCAGAAGTCTTGTTCAGATACACCAACATGCATCTAACCTGGGGACAGGCCATAGTCACCAGTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCCTGTCCCCAGGTTAGATGCATGTTGGTGTATCTGAACAAGACTTCTGGAATCTTACACAACTGTTaGGTACTGAGAGTTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MACPQVRCMLVYLNKTSGILHNC*VLRVQQ Trigger: CTGCTGAACTCTCAGTACCAAACAGTTGTGTAAGAT...TCCAGAAGTCTTGTTCAGATACACCAACATGCATCTAACCTGGGGACAGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR TCA 72 bp | AAATGGATCTCTGAGTTTGAGGTCTGGTCTACAAAATaGGTTCCACAACAGCCAGAGCTACACACAGACACC | + |
|
Preference number: 3 (lower is better) Translates to: KWISEFEVWSTK*VPQQPELHTDT Trigger: GGTGTCTGTGTGTAGCTCTGGCTGTTGTGGAACTCATTTTGTAGACCAGACCTCAAACTCAGAGATCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
||
| 3UTR GCA 72 bp | AGAAAAACATTCCAGCTACCGAGATATGAAAGGCTTTaGTGCTGTCGCAGAATGTACCTTGCTAAAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RKTFQLPRYERL*CCRRMYLAKSK Trigger: CTTGCTTTTAGCAAGGTACATTCTGCGACAGCAGCAAAGCCTTTCATATCTCGGTAGCTGGAATGTTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CCA 72 bp | TCATTCAACAAGTATTTCCTGTCACCTGCCCTATACTaGCTCCATGCTTGGTATCTTCTAGTTGATGGAACT | + |
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Preference number: 3 (lower is better) Translates to: SFNKYFLSPALY*LHAWYLLVDGT Trigger: AGTTCCATCAACTAGAAGATACCAAGCATGGAGCCAGTATAGGGCAGGTGACAGGAAATACTTGTTGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 72 bp | GACGTGGCCCGTGGCCCTGAGGCGCCTCCACCATGCTaGTTCCCATGGGGCCCTGACTCTGTCACCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: DVARGPEAPPPC*FPWGPDSVTLG Trigger: CCCCAGGGTGACAGAGTCAGGGCCCCATGGGAACAAGCATGGTGGAGGCGCCTCAGGGCCACGGGCCACGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS-3UTR GCA 90 bp | AGAATCAGAGGCAGGTGGAACTGTGAGTTCCAGGACAGCCAAGGCTACACACAGGGCGTTCTCCGGTCCTaGGGCTCCGCAGCTCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RIRGRWNCEFQDSQGYTQGVLRS*GSAARR Trigger: GCGCCGAGCTGCGGAGCCGCAGGACCGGAGAACGCC...CTGTGTGTAGCCTTGGCTGTCCTGGAACTCACAGTTCCACCTGCCTCTGATTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS-3UTR GCA 90 bp | TCAGTTCTGGCTCAGGGGCTCCCCATCAAGGGTCAGCCATCTTCCATCATTTCTGGCCACAGCTGCCTGTaGGGCCTTTTGCACCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLAQGLPIKGQPSSIISGHSCL*GLLHPR Trigger: CCGCGGGTGCAAAAGGCCGCACAGGCAGCTGTGGCC...AGAAATGATGGAAGATGGCTGACCCTTGATGGGGAGCCCCTGAGCCAGAACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS-3UTR GCA 90 bp | TGCCTGGTGCCTCTGCTTCTGTCTCTAGGCTGTGTTGCTAGCATCTTCAGGACACGCAGTTTCTCCTGCTaGCCCCCTGCAGCCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: CLVPLLLSLGCVASIFRTRSFSC*PPAARG Trigger: CCCTCTGGCTGCAGGGGGGCAGCAGGAGAAACTGCG...TGTCCTGAAGATGCTAGCAACACAGCCTAGAGACAGAAGCAGAGGCACCAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS-3UTR TCA 90 bp | ATGGCCTGTCCCCAGGTTAGATGCATGTTGGTGTATCTGAACAAGACTTCTGGAGGCGCGGGCGTCAGGTaGCAGGGTCAGGAGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MACPQVRCMLVYLNKTSGGAGVR*QGQEAE Trigger: TTCTGCCTCCTGACCCTGTCACCTGACGCCCGCGCC...TCCAGAAGTCTTGTTCAGATACACCAACATGCATCTAACCTGGGGACAGGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS-3UTR TCA 90 bp | GCAGTTCCCAGTACCCACATCAGACTGCTTACAGCCACCTGTAACTCAGATCTACCAGAGGGCAGGTGGTaGGGTCCATGTGTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVPSTHIRLLTATCNSDLPEGRW*GPCVLQ Trigger: CTGGAGAACACATGGACCTCACCACCTGCCCTCTGG...TAGATCTGAGTTACAGGTGGCTGTAAGCAGTCTGATGTGGGTACTGGGAACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 72 bp | TCTGGTTACCCTCCCTGCTACCCCAGTGATGCCAGCTaGAGCCTAGCACCTTCAAAGCAACTGGTGACTATG | + |
|
Preference number: 4 (lower is better) Translates to: SGYPPCYPSDAS*SLAPSKQLVTM Trigger: CATAGTCACCAGTTGCTTTGAAGGTGCTAGGCTCAAGCTGGCATCACTGGGGTAGCAGGGAGGGTAACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS-3UTR GCA 90 bp | TGCCTGGTGCCTCTGCTTCTGTCTCTAGGCTGTGTTGCTAGCATCTTCAGGACAAGTAGAGGCTGTCGCTaGCCATATTGTAGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLVPLLLSLGCVASIFRTSRGCR*PYCSWP Trigger: TGGCCAGCTACAATATGGGCAGCGACAGCCTCTACT...TGTCCTGAAGATGCTAGCAACACAGCCTAGAGACAGAAGCAGAGGCACCAGGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 72 bp | GTGAGCTGGAAACCCAGTCCTGTAGGGCCCATGGAGTaGAGCAGCCATCTTACACAACTGTTTGGTACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSWKPSPVGPME*SSHLTQLFGTE Trigger: CTCAGTACCAAACAGTTGTGTAAGATGGCTGCTCAACTCCATGGGCCCTACAGGACTGGGTTTCCAGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS-3UTR CCA 90 bp | AGCTACCGAGATATGAAAGGCTTTGCTGCTGTCGCAGAATGTACCTTGCTAAAATGCCCATATTGTAGCTaGCCACAGCTGCCTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SYRDMKGFAAVAECTLLKCPYCS*PQLPVR Trigger: CCGCACAGGCAGCTGTGGCCAGCTACAATATGGGCA...TTTTAGCAAGGTACATTCTGCGACAGCAGCAAAGCCTTTCATATCTCGGTAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 72 bp | CAATCTAGAGGGTTGTGGAGGTTGGAGACTGGTGGTTaGACCAACACCCACACACACCATTGGTTTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSRGLWRLETGG*TNTHTHHWFVP Trigger: TGGAACAAACCAATGGTGTGTGTGGGTGTTGGTCAAACCACCAGTCTCCAACCTCCACAACCCTCTAGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 72 bp | CTGAACAAGACTTCTGGATGTGATGTAAATGCTGGCTaGGAGGGAGGGGTGCTGTATACTCATCTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNKTSGCDVNAG*EGGVLYTHLWV Trigger: AACCCAGAGATGAGTATACAGCACCCCTCCCTCCAAGCCAGCATTTACATCACATCCAGAAGTCTTGTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 72 bp | AACCATATTGCTCTTAGTAGAGGCCAATCTAGAGGGTaGTGGAGGTTGGAGACTGGTGGTTTGACCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: NHIALSRGQSRG*WRLETGGLTNT Trigger: GGTGTTGGTCAAACCACCAGTCTCCAACCTCCACAACCCTCTAGATTGGCCTCTACTAAGAGCAATATGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 72 bp | AATATATATGTGGTCAAATGTTCCAGACATGCTGAGTaGGAATGGTGCGTGCCTGTGATCCCAGCACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NIYVVKCSRHAE*EWCVPVIPALG Trigger: CCCAAGTGCTGGGATCACAGGCACGCACCATTCCAACTCAGCATGTCTGGAACATTTGACCACATATATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 72 bp | CTGGTGACTATGGCCTGTCCCCAGGTTAGATGCATGTaGGTGTATCTGAACAAGACTTCTGGATGTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVTMACPQVRCM*VYLNKTSGCDV Trigger: TACATCACATCCAGAAGTCTTGTTCAGATACACCAACATGCATCTAACCTGGGGACAGGCCATAGTCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| 3UTR CAA 72 bp | TCAAGGGTCAGCCATCTTCCATCATTTCTAACCATATaGCTCTTAGTAGAGGCCAATCTAGAGGGTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRVSHLPSFLTI*LLVEANLEGCG Trigger: TCCACAACCCTCTAGATTGGCCTCTACTAAGAGCAATATGGTTAGAAATGATGGAAGATGGCTGACCCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS TCA 90 bp | GCGTTCTCCGGTCCTGCGGCTCCGCAGCTCGGCGCGGGCGTCAGGTaGCAGGGTCAGGAGGCAGAATGCGAGCAGGCCAAGGCCCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: AFSGPAAPQLGAGVR*QGQEAECEQAKAHR Trigger: GCGATGGGCCTTGGCCTGCTCGCATTCTGCCTCCTGACCCTGTCACCTGACGCCCGCGCCGAGCTGCGGAGCCGCAGGACCGGAGAACGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS GCA 90 bp | GCACCCGCGGGTCGGTGGGTGACAAGTTCTGGCGTTCTCCGGTCCTaGGGCTCCGCAGCTCGGCGCGGGCGTCAGGTGACAGGGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: APAGRWVTSSGVLRS*GSAARRGRQVTGSG Trigger: TCCTGACCCTGTCACCTGACGCCCGCGCCGAGCTGCGGAGCCGCAGGACCGGAGAACGCCAGAACTTGTCACCCACCGACCCGCGGGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS TCA 90 bp | GGCCACAGCTGCCTGTGCGGCCTTTTGCACCCGCGGGTCGGTGGGTaGCAAGTTCTGGCGTTCTCCGGTCCTGCGGCTCCGCAGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GHSCLCGLLHPRVGG*QVLAFSGPAAPQLG Trigger: GCCGAGCTGCGGAGCCGCAGGACCGGAGAACGCCAGAACTTGTCACCCACCGACCCGCGGGTGCAAAAGGCCGCACAGGCAGCTGTGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS CCA 90 bp | AGCTGGCCACAGCTGCCTGTGCGGCCTTTTGCACCCGCGGGTCGGTaGGTGACAAGTTCTGGCGTTCTCCGGTCCTGCGGCTCCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWPQLPVRPFAPAGR*VTSSGVLRSCGSAA Trigger: AGCTGCGGAGCCGCAGGACCGGAGAACGCCAGAACTTGTCACCCACCGACCCGCGGGTGCAAAAGGCCGCACAGGCAGCTGTGGCCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS CCA 90 bp | TGGTGTCTCGGAAGTAGTAGAGGCTGTCGCTGCCCATATTGTAGCTaGCCACAGCTGCCTGTGCGGCCTTTTGCACCCGCGGGTCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WCLGSSRGCRCPYCS*PQLPVRPFAPAGRW Trigger: CCACCGACCCGCGGGTGCAAAAGGCCGCACAGGCAGCTGTGGCCAGCTACAATATGGGCAGCGACAGCCTCTACTACTTCCGAGACACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS GCA 90 bp | CAGGGGACTTCAAGGAGCTCAAAGTTGCAACGCAGTTTCTCCTGCTaGCCCCCTGCAGCCAGAGGGCAGGTGGTGAGGTCCATGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGTSRSSKLQRSFSC*PPAARGQVVRSMCS Trigger: AGAACACATGGACCTCACCACCTGCCCTCTGGCTGCAGGGGGGCAGCAGGAGAAACTGCGTTGCAACTTTGAGCTCCTTGAAGTCCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS CCA 90 bp | TATGTCCAAAGTCAGGTAGTACTTGATGCCAGCCACCAGCTGGAGTaGAGGCAGGAACTTCTGTGTGTGAGCAGAGCCCTAGGCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YVQSQVVLDASHQLE*RQELLCVSRALGWA Trigger: TGCCCAGCCTAGGGCTCTGCTCACACACAGAAGTTCCTGCCTCCACTCCAGCTGGTGGCTGGCATCAAGTACTACCTGACTTTGGACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238111.2 |
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| CDS GCA 90 bp | GGGCAAGAAGCTGGAGAGCTCCTGTCTGCGGCTAGACTGATATTTTaGATCGATGACTTTGGTGTCTCGGAAGTAGTAGAGGCTGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GQEAGELLSAARLIF*IDDFGVSEVVEAVA Trigger: AGCGACAGCCTCTACTACTTCCGAGACACCAAAGTCATCGATGCAAAATATCAGTCTAGCCGCAGACAGGAGCTCTCCAGCTTCTTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238111.2 |
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| CDS TCA 72 bp | GGTCCTGCGGCTCCGCAGCTCGGCGCGGGCGTCAGGTaGCAGGGTCAGGAGGCAGAATGCGAGCAGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GPAAPQLGAGVR*QGQEAECEQAK Trigger: CTTGGCCTGCTCGCATTCTGCCTCCTGACCCTGTCACCTGACGCCCGCGCCGAGCTGCGGAGCCGCAGGACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS GCA 72 bp | GGTCGGTGGGTGACAAGTTCTGGCGTTCTCCGGTCCTaGGGCTCCGCAGCTCGGCGCGGGCGTCAGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: GRWVTSSGVLRS*GSAARRGRQVT Trigger: TGTCACCTGACGCCCGCGCCGAGCTGCGGAGCCGCAGGACCGGAGAACGCCAGAACTTGTCACCCACCGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS TCA 72 bp | TGCCTGTGCGGCCTTTTGCACCCGCGGGTCGGTGGGTaGCAAGTTCTGGCGTTCTCCGGTCCTGCGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: CLCGLLHPRVGG*QVLAFSGPAAP Trigger: CGGAGCCGCAGGACCGGAGAACGCCAGAACTTGTCACCCACCGACCCGCGGGTGCAAAAGGCCGCACAGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS CCA 72 bp | CAGCTGCCTGTGCGGCCTTTTGCACCCGCGGGTCGGTaGGTGACAAGTTCTGGCGTTCTCCGGTCCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLPVRPFAPAGR*VTSSGVLRSCG Trigger: GCCGCAGGACCGGAGAACGCCAGAACTTGTCACCCACCGACCCGCGGGTGCAAAAGGCCGCACAGGCAGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS GCA 72 bp | GAGGCTGTCGCTGCCCATATTGTAGCTGGCCACAGCTaGCTGTGCGGCCTTTTGCACCCGCGGGTCGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EAVAAHIVAGHS*LCGLLHPRVGG Trigger: CCCACCGACCCGCGGGTGCAAAAGGCCGCACAGGCAGCTGTGGCCAGCTACAATATGGGCAGCGACAGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS GCA 72 bp | TCAAGGAGCTCAAAGTTGCAACGCAGTTTCTCCTGCTaGCCCCCTGCAGCCAGAGGGCAGGTGGTGAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSSKLQRSFSC*PPAARGQVVRS Trigger: GGACCTCACCACCTGCCCTCTGGCTGCAGGGGGGCAGCAGGAGAAACTGCGTTGCAACTTTGAGCTCCTTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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| CDS CCA 72 bp | GGAAGTAGTAGAGGCTGTCGCTGCCCATATTGTAGCTaGCCACAGCTGCCTGTGCGGCCTTTTGCACCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GSSRGCRCPYCS*PQLPVRPFAPA Trigger: CGCGGGTGCAAAAGGCCGCACAGGCAGCTGTGGCCAGCTACAATATGGGCAGCGACAGCCTCTACTACTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025764.6 ENSMUST00000238111.2 |
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| CDS TCA 72 bp | GGCAAGAAGCTGGAGAGCTCCTGTCTGCGGCTAGACTaGTATTTTGCATCGATGACTTTGGTGTCTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GKKLESSCLRLD*YFASMTLVSRK Trigger: CTTCCGAGACACCAAAGTCATCGATGCAAAATATCAGTCTAGCCGCAGACAGGAGCTCTCCAGCTTCTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238111.2 |
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| CDS GCA 72 bp | GCTGGAGAGCTCCTGTCTGCGGCTAGACTGATATTTTaGATCGATGACTTTGGTGTCTCGGAAGTAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGELLSAARLIF*IDDFGVSEVVE Trigger: CTCTACTACTTCCGAGACACCAAAGTCATCGATGCAAAATATCAGTCTAGCCGCAGACAGGAGCTCTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238111.2 |
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| CDS GCA 72 bp | CAGGTAGTACTTGATGCCAGCCACCAGCTGATATTTTaGATCGATGACTTTGGTGTCTCGGAAGTAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QVVLDASHQLIF*IDDFGVSEVVE Trigger: CTCTACTACTTCCGAGACACCAAAGTCATCGATGCAAAATATCAGCTGGTGGCTGGCATCAAGTACTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025764.6 |
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