Pregenerated sensors for CSRP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030470Ensembl transcript IDs: ENSMUST00000032658.14, ENSMUST00000167786.4, ENSMUST00000208050.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGATAACATTCCCAGTGGTCTCTTGTTACTTCGGTGCAGCCTATaGCTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ADNIPSGLLLLRCSL*LLLKRNAVQLQRRL Trigger: CAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTGCACCGAAGTAACAAGAGACCACTGGGAATGTTATCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| 3UTR-3UTR GCA 90 bp | ATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTAGCTTCTGAAGAGAAATaGTGTCCAGCTACAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: IVNSEASVADNIPSGLLLASEEK*CPATKE Trigger: CTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGC...TAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| 3UTR CCA 72 bp | GCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTaGGATCACGTGGCACTGCTGTTGACTGATAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: ATKEAVGDKLHL*DHVALLLTDRA Trigger: AGCCCTATCAGTCAACAGCAGTGCCACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| 3UTR TCA 72 bp | GTCTCTTGTTACTTCGGTGCAGCCTATGACTGCTTCTaGAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: VSCYFGAAYDCF*REMLSSYKGGC Trigger: ACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTGCACCGAAGTAACAAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| 3UTR TCA 72 bp | ATTCCCAGTGGTCTCTTGTTACTTCGGTGCAGCCTATaGCTGCTTCTGAAGAGAAATGCTGTCCAGCTACAA | + |
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Preference number: 3 (lower is better) Translates to: IPSGLLLLRCSL*LLLKRNAVQLQ Trigger: TTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTGCACCGAAGTAACAAGAGACCACTGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| 3UTR-3UTR CAA 90 bp | GTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTACTTCTACAAAGGAGGCTGTaGGGGACAAACTACATCTGT | + |
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Preference number: 3 (lower is better) Translates to: VNSEASVADNIPSGLLLLLQRRL*GTNYIC Trigger: ACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAG...AAGTAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR TCA 90 bp | TACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTGGCACTGCTCGCCAGTGTCTGTGCTaGGGCAGCCAGCGCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: YKGGCWGQTTSVGSRGTARQCLC*GSQRLV Trigger: GACAAGGCGCTGGCTGCCTCAGCACAGACACTGGCG...AGCAGTGCCACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | CTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTCGGAAGCAGGTCTTGTaGCAGGGCTTGCCACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LSSYKGGCWGQTTSVGSRRKQVL*QGLPPP Trigger: GGGAGGTGGCAAGCCCTGGCACAAGACCTGCTTCCG...ACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | GAAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGACGGAAGCAGGTCTTGTaGCAGGGCTTGCCACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: EMLSSYKGGCWGQTTSVGRKQVL*QGLPPP Trigger: GGGAGGTGGCAAGCCCTGGCACAAGACCTGCTTCCG...TCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | AGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTGGCACTCCTTGGGGCCATACCTaGGCCCATAGCACACCTTAC | + |
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Preference number: 4 (lower is better) Translates to: SYKGGCWGQTTSVGSRGTPWGHT*AHSTPY Trigger: GTAAGGTGTGCTATGGGCGCAGGTATGGCCCCAAGG...AGTGCCACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | TACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTGGCACTGCTCCTTGGGGCCATACCTaGGCCCATAGCACACCTTAC | + |
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Preference number: 4 (lower is better) Translates to: YKGGCWGQTTSVGSRGTAPWGHT*AHSTPY Trigger: GTAAGGTGTGCTATGGGCGCAGGTATGGCCCCAAGG...AGCAGTGCCACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | CTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTGGCTCTTCCCACAGATaGCACAGCGGAAGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LSSYKGGCWGQTTSVGSRGSSHR*HSGSRS Trigger: AGACCTGCTTCCGCTGTGCCATCTGTGGGAAGAGCC...ACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | CTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTGGGGATTGTTGGAACTaGAGGCCAAGATGCTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSSYKGGCWGQTTSVGSRGDCWN*RPRCSP Trigger: TGGCGAGCATCTTGGCCTGCAGTTCCAACAATCCCC...ACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | TACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTGGCACTGCTACAGGCTCCACATTTTaGACCTCCACCCCAGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: YKGGCWGQTTSVGSRGTATGSTF*TSTPVW Trigger: CCAAACTGGGGTGGAGGTGCAAAATGTGGAGCCTGT...AGCAGTGCCACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | AATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCGGGGATTGTTGGAACTaGAGGCCAAGATGCTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: NAVQLQRRLLGTNYICGIGDCWN*RPRCSP Trigger: TGGCGAGCATCTTGGCCTGCAGTTCCAACAATCCCC...GATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | AAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATGGCTCTTCCCACAGATaGCACAGCGGAAGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KCCPATKEAVGDKLHLWDGSSHR*HSGSRS Trigger: AGACCTGCTTCCGCTGTGCCATCTGTGGGAAGAGCC...ATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR TCA 90 bp | ACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAAGCTTGCCACCTCCCATaGCCTTCTCAGCAGCGTATA | + |
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Preference number: 4 (lower is better) Translates to: TASEEKCCPATKEAVGDKACHLP*PSQQRI Trigger: TATACGCTGCTGAGAAGGTCATGGGAGGTGGCAAGC...TTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | AAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTACTTCGGTGCAGCCAACTGCAGGCCAAGATaGTCGCCAGTGTCTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: KHLLQITFPVVSCYFGAANCRPR*SPVSVL Trigger: CAGCACAGACACTGGCGAGCATCTTGGCCTGCAGTT...GGCTGCACCGAAGTAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | CTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTCTGCAGGCCATGCAGTaGAAACAGGTCTTGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LSSYKGGCWGQTTSVGSRLQAMQ*KQVLWK Trigger: TTTCCACAAGACCTGTTTCCACTGCATGGCCTGCAG...ACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| 3UTR CAA 72 bp | CTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTaGGGGACAAACTACATCTGTGGGATCACGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LKRNAVQLQRRL*GTNYICGITWH Trigger: GTGCCACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR TCA 90 bp | CTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTTCGTGGGCACTTCTCTaGTTCTCCAAACTTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LSSYKGGCWGQTTSVGSRSWALL*FSKLCR Trigger: TCTGCAAAGTTTGGAGAATCAGAGAAGTGCCCACGA...ACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | CAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTACAGGCTCCACATTTTaGACCTCCACCCCAGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: QPMTASEEKCCPATKEAVTGSTF*TSTPVW Trigger: CCAAACTGGGGTGGAGGTGCAAAATGTGGAGCCTGT...AACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | CAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTTGTCCAGAGCTTTCCTaGAGGCCATGCAGTGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: QPMTASEEKCCPATKEAVCPELS*RPCSGN Trigger: GTTTCCACTGCATGGCCTGCAGGAAAGCTCTGGACA...AACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | CTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTTGGAAACAGGTCTTGTaGAAACTCCTCCCATTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSSYKGGCWGQTTSVGSRWKQVL*KLLPLH Trigger: GTGCAATGGGAGGAGTTTCCACAAGACCTGTTTCCA...ACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | AAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATGGCTTTGGGGATTGTTaGAACTGCAGGCCAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: KCCPATKEAVGDKLHLWDGFGDC*NCRPRC Trigger: GCATCTTGGCCTGCAGTTCCAACAATCCCCAAAGCC...ATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR TCA 90 bp | GAAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGACTTACAGTAGATCTCTaGCTCATGAGCTGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: EMLSSYKGGCWGQTTSVGLTVDL*LMSCHC Trigger: ACAGTGGCAGCTCATGAGTCAGAGATCTACTGTAAG...TCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | CAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTGCCCTCCAAACCCAATaGCTGTGGGGCCAAAATTTT | + |
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Preference number: 4 (lower is better) Translates to: QPMTASEEKCCPATKEAVALQTQ*LWGQNF Trigger: AAAATTTTGGCCCCACAGGCATTGGGTTTGGAGGGC...AACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | CTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTCAAACCCAATGCCTGTaGGGCCAAAATTTTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LSSYKGGCWGQTTSVGSRQTQCL*GQNFWH Trigger: ATGCCAAAAATTTTGGCCCCACAGGCATTGGGTTTG...ACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | AAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATGCACTGGATTTCTTCTaGATGGTAGACCGTCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: KCCPATKEAVGDKLHLWDALDFF*MVDRLF Trigger: GAAAAGACGGTCTACCATGCAGAAGAAATCCAGTGC...ATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | ACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAAGCACTGGATTTCTTCTaGATGGTAGACCGTCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TASEEKCCPATKEAVGDKALDFF*MVDRLF Trigger: GAAAAGACGGTCTACCATGCAGAAGAAATCCAGTGC...TTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | CAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTTCCTTCTTTTCCACTTaGTGTGTAAGCCCTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: QPMTASEEKCCPATKEAVSFFST*CVSPPN Trigger: GTTTGGAGGGCTTACACAGCAAGTGGAAAAGAAGGA...AACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | ACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAAACTTTGCAGAGAATTTaGAAGGGTTGCTTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TASEEKCCPATKEAVGDKTLQRI*KGCLWW Trigger: CCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGT...TTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | CAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTACTTTGCAGAGAATTTaGAAGGGTTGCTTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QPMTASEEKCCPATKEAVTLQRI*KGCLWW Trigger: CCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGT...AACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | CTTGTTACTTCGGTGCAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTCAAACCCAATGCCTGTaGGGCCAAAATTTTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LVTSVQPMTASEEKCCPAQTQCL*GQNFWH Trigger: ATGCCAAAAATTTTGGCCCCACAGGCATTGGGTTTG...AGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTGCACCGAAGTAACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR TCA 90 bp | ATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTAGCTTGCCACCTCCCATaGCCTTCTCAGCAGCGTATA | + |
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Preference number: 4 (lower is better) Translates to: IVNSEASVADNIPSGLLLACHLP*PSQQRI Trigger: TATACGCTGCTGAGAAGGTCATGGGAGGTGGCAAGC...TAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | ATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTAAACTGCAGGCCAAGATaGTCGCCAGTGTCTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IVNSEASVADNIPSGLLLNCRPR*SPVSVL Trigger: CAGCACAGACACTGGCGAGCATCTTGGCCTGCAGTT...TAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR TCA 90 bp | TCTCCCATCCCAAGAATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCTCGTGGGCACTTCTCTaGTTCTCCAAACTTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SPIPRIVNSEASVADNIPSWALL*FSKLCR Trigger: TCTGCAAAGTTTGGAGAATCAGAGAAGTGCCCACGA...GGGAATGTTATCTGCAACAGATGCTTCACTATTTACTATTCTTGGGATGGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | ATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTAGCCCTCCAAACCCAATaGCTGTGGGGCCAAAATTTT | + |
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Preference number: 4 (lower is better) Translates to: IVNSEASVADNIPSGLLLALQTQ*LWGQNF Trigger: AAAATTTTGGCCCCACAGGCATTGGGTTTGGAGGGC...TAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | TCTCCCATCCCAAGAATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCTCCTTCTTTTCCACTTaGTGTGTAAGCCCTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SPIPRIVNSEASVADNIPSFFST*CVSPPN Trigger: GTTTGGAGGGCTTACACAGCAAGTGGAAAAGAAGGA...GGGAATGTTATCTGCAACAGATGCTTCACTATTTACTATTCTTGGGATGGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | GTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTACTTTGGAAACAGGTCTTGTaGAAACTCCTCCCATTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VNSEASVADNIPSGLLLLWKQVL*KLLPLH Trigger: GTGCAATGGGAGGAGTTTCCACAAGACCTGTTTCCA...AAGTAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR CCA 90 bp | ACATTTATTGTCTCTCCCATCCCAAGAATAGTAAATAGTGAAGCATCTGTTGCACTGCAGGCCATGCAGTaGAAACAGGTCTTGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TFIVSPIPRIVNSEASVALQAMQ*KQVLWK Trigger: TTTCCACAAGACCTGTTTCCACTGCATGGCCTGCAG...TGCAACAGATGCTTCACTATTTACTATTCTTGGGATGGGAGAGACAATAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR TCA 90 bp | ACATTTATTGTCTCTCCCATCCCAAGAATAGTAAATAGTGAAGCATCTGTTGCACTTACAGTAGATCTCTaGCTCATGAGCTGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: TFIVSPIPRIVNSEASVALTVDL*LMSCHC Trigger: ACAGTGGCAGCTCATGAGTCAGAGATCTACTGTAAG...TGCAACAGATGCTTCACTATTTACTATTCTTGGGATGGGAGAGACAATAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS-3UTR GCA 90 bp | ATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTAGGAAACTCCTCCCATTaGACTGGATTTCTTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: IVNSEASVADNIPSGLLLGNSSH*TGFLLH Trigger: ATGCAGAAGAAATCCAGTGCAATGGGAGGAGTTTCC...TAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTACTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS TCA 90 bp | GGGATTGTTGGAACTGCAGGCCAAGATGCTCGCCAGTGTCTGTGCTaGGGCAGCCAGCGCCTTGTCCGAACCCGATCCCCTTGGGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GIVGTAGQDARQCLC*GSQRLVRTRSPWGH Trigger: ATGGCCCCAAGGGGATCGGGTTCGGACAAGGCGCTGGCTGCCTCAGCACAGACACTGGCGAGCATCTTGGCCTGCAGTTCCAACAATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS GCA 90 bp | GGCAGCCAGCGCCTTGTCCGAACCCGATCCCCTTGGGGCCATACCTaGGCCCATAGCACACCTTACAGTAGATCTCTGACTCATGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSQRLVRTRSPWGHT*AHSTPYSRSLTHEL Trigger: CAGCTCATGAGTCAGAGATCTACTGTAAGGTGTGCTATGGGCGCAGGTATGGCCCCAAGGGGATCGGGTTCGGACAAGGCGCTGGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | TACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATCACGTGGCACTGCTATTTGGAAGGGTTGCTaGTGGTGGCTGCTCGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YKGGCWGQTTSVGSRGTAIWKGC*WWLLEL Trigger: CAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAAT...AGCAGTGCCACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | CTTGTTACTTCGGTGCAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTGTCTTGTGCCAGGGCTaGCCACCTCCCATGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVTSVQPMTASEEKCCPAVLCQG*PPPMTF Trigger: GAAGGTCATGGGAGGTGGCAAGCCCTGGCACAAGAC...AGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTGCACCGAAGTAACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | ACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAAGTCTTGTGCCAGGGCTaGCCACCTCCCATGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TASEEKCCPATKEAVGDKVLCQG*PPPMTF Trigger: GAAGGTCATGGGAGGTGGCAAGCCCTGGCACAAGAC...TTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS GCA 90 bp | TGCAGGCCATGCAGTGGAAACAGGTCTTGTGGAAACTCCTCCCATTaGACTGGATTTCTTCTGCATGGTAGACCGTCTTTTCACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRPCSGNRSCGNSSH*TGFLLHGRPSFHRL Trigger: GAGCCTGTGAAAAGACGGTCTACCATGCAGAAGAAATCCAGTGCAATGGGAGGAGTTTCCACAAGACCTGTTTCCACTGCATGGCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 ENSMUST00000208050.2 |
||
| CDS GCA 90 bp | TTCTCCAAACTTTGCAGAGAATTTGGAAGGGTTGCTTGTGGTGGCTaGTCGAGCTGGCTTTGGGGATTGTTGGAACTGCAGGCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FSKLCREFGRVACGG*SSWLWGLLELQAKM Trigger: CATCTTGGCCTGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CCA 90 bp | CTGATTCTCCAAACTTTGCAGAGAATTTGGAAGGGTTGCTTGTGGTaGCTGCTCGAGCTGGCTTTGGGGATTGTTGGAACTGCAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LILQTLQRIWKGCLW*LLELALGIVGTAGQ Trigger: TTGGCCTGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CCA 90 bp | TCTCTGATTCTCCAAACTTTGCAGAGAATTTGGAAGGGTTGCTTGTaGTGGCTGCTCGAGCTGGCTTTGGGGATTGTTGGAACTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLILQTLQRIWKGCL*WLLELALGIVGTAG Trigger: GCCTGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CCA 90 bp | CACATCGTGGGCACTTCTCTGATTCTCCAAACTTTGCAGAGAATTTaGAAGGGTTGCTTGTGGTGGCTGCTCGAGCTGGCTTTGGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: HIVGTSLILQTLQRI*KGCLWWLLELALGI Trigger: AATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGAAGTGCCCACGATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | CTTGTTACTTCGGTGCAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTCACAGGCTCCACATTTaGCACCTCCACCCCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTSVQPMTASEEKCCPAHRLHI*HLHPSL Trigger: CAAACTGGGGTGGAGGTGCAAAATGTGGAGCCTGTG...AGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTGCACCGAAGTAACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | AAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTACTTCGGTGCAGCCATTTGGAAGGGTTGCTaGTGGTGGCTGCTCGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KHLLQITFPVVSCYFGAAIWKGC*WWLLEL Trigger: CAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAAT...GGCTGCACCGAAGTAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS GCA 90 bp | GGCACTTCTCTGATTCTCCAAACTTTGCAGAGAATTTGGAAGGGTTaGTTGTGGTGGCTGCTCGAGCTGGCTTTGGGGATTGTTGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: GTSLILQTLQRIWKG*LWWLLELALGIVGT Trigger: AGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGAAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | CTTGTTACTTCGGTGCAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTTGGCTTTGGGGATTGTaGGAACTGCAGGCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LVTSVQPMTASEEKCCPAWLWGL*ELQAKM Trigger: CATCTTGGCCTGCAGTTCCAACAATCCCCAAAGCCA...AGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTGCACCGAAGTAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS GCA 90 bp | GAAACAGGTCTTGTGGAAACTCCTCCCATTGCACTGGATTTCTTCTaGATGGTAGACCGTCTTTTCACAGGCTCCACATTTTGCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ETGLVETPPIALDFF*MVDRLFTGSTFCTS Trigger: GGAGGTGCAAAATGTGGAGCCTGTGAAAAGACGGTCTACCATGCAGAAGAAATCCAGTGCAATGGGAGGAGTTTCCACAAGACCTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 ENSMUST00000208050.2 |
||
| CDS-3UTR CAA 90 bp | ACATTTATTGTCTCTCCCATCCCAAGAATAGTAAATAGTGAAGCATCTGTTGCAGAGGCAGCCAGCGCCTaGTCCGAACCCGATCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TFIVSPIPRIVNSEASVAEAASA*SEPDPL Trigger: AAGGGGATCGGGTTCGGACAAGGCGCTGGCTGCCTC...TGCAACAGATGCTTCACTATTTACTATTCTTGGGATGGGAGAGACAATAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTAGAGGCAGCCAGCGCCTaGTCCGAACCCGATCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: IVNSEASVADNIPSGLLLEAASA*SEPDPL Trigger: AAGGGGATCGGGTTCGGACAAGGCGCTGGCTGCCTC...TAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS TCA 90 bp | CTTCTCAGCAGCGTATACCGACTTTCCACATCGTGGGCACTTCTCTaGTTCTCCAAACTTTGCAGAGAATTTGGAAGGGTTGCTTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSSVYRLSTSWALL*FSKLCREFGRVACG Trigger: ACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGAAGTGCCCACGATGTGGAAAGTCGGTATACGCTGCTGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | AAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGATTGGAAACTCCTCCCATaGCACTGGATTTCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KCCPATKEAVGDKLHLWDWKLLP*HWISSA Trigger: TGCAGAAGAAATCCAGTGCAATGGGAGGAGTTTCCA...ATCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | TCTCCCATCCCAAGAATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCCACAGGCTCCACATTTaGCACCTCCACCCCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPIPRIVNSEASVADNIPHRLHI*HLHPSL Trigger: CAAACTGGGGTGGAGGTGCAAAATGTGGAGCCTGTG...GGGAATGTTATCTGCAACAGATGCTTCACTATTTACTATTCTTGGGATGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | CAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTACAAAGGAGGCTGTTAACTTTGCAGAGAATTaGGAAGGGTTGCTTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPMTASEEKCCPATKEAVNFAEN*EGLLVV Trigger: CACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTT...AACAGCCTCCTTTGTAGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | CTTGTTACTTCGGTGCAGCCTATGACTGCTTCTGAAGAGAAATGCTGTCCAGCTAACTTTGCAGAGAATTaGGAAGGGTTGCTTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTSVQPMTASEEKCCPANFAEN*EGLLVV Trigger: CACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTT...AGCTGGACAGCATTTCTCTTCAGAAGCAGTCATAGGCTGCACCGAAGTAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | GAAATGCTGTCCAGCTACAAAGGAGGCTGTTGGGGACAAACTACATCTGTGGGACTGATTCTCCAAACTTaGCAGAGAATTTGGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EMLSSYKGGCWGQTTSVGLILQT*QRIWKG Trigger: ACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAG...TCCCACAGATGTAGTTTGTCCCCAACAGCCTCCTTTGTAGCTGGACAGCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | GTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTACTTGAGAATTTGGAAGGGTaGCTTGTGGTGGCTGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VNSEASVADNIPSGLLLLENLEG*LVVAAR Trigger: TCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTC...AAGTAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | ACATTTATTGTCTCTCCCATCCCAAGAATAGTAAATAGTGAAGCATCTGTTGCAGAGAATTTGGAAGGGTaGCTTGTGGTGGCTGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TFIVSPIPRIVNSEASVAENLEG*LVVAAR Trigger: TCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTC...TGCAACAGATGCTTCACTATTTACTATTCTTGGGATGGGAGAGACAATAAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | GTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTACTTTGGAAACTCCTCCCATaGCACTGGATTTCTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VNSEASVADNIPSGLLLLWKLLP*HWISSA Trigger: TGCAGAAGAAATCCAGTGCAATGGGAGGAGTTTCCA...AAGTAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | ACATTTATTGTCTCTCCCATCCCAAGAATAGTAAATAGTGAAGCATCTGTTGCACAGTGGAAACAGGTCTaGTGGAAACTCCTCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TFIVSPIPRIVNSEASVAQWKQV*WKLLPL Trigger: CAATGGGAGGAGTTTCCACAAGACCTGTTTCCACTG...TGCAACAGATGCTTCACTATTTACTATTCTTGGGATGGGAGAGACAATAAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | GTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTACTTCTCCTTCTTTTCCACTaGCTGTGTAAGCCCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VNSEASVADNIPSGLLLLLLLFH*LCKPSK Trigger: TTTGGAGGGCTTACACAGCAAGTGGAAAAGAAGGAG...AAGTAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTAAATAGTGAAGCATCTGTTGCAGATAACATTCCCAGTGGTCTCTTGTTACTGATTCTCCAAACTTaGCAGAGAATTTGGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: IVNSEASVADNIPSGLLLLILQT*QRIWKG Trigger: ACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAG...TAACAAGAGACCACTGGGAATGTTATCTGCAACAGATGCTTCACTATTTACTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CAA 72 bp | ATGCTCGCCAGTGTCTGTGCTGAGGCAGCCAGCGCCTaGTCCGAACCCGATCCCCTTGGGGCCATACCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: MLASVCAEAASA*SEPDPLGAIPA Trigger: CGCAGGTATGGCCCCAAGGGGATCGGGTTCGGACAAGGCGCTGGCTGCCTCAGCACAGACACTGGCGAGCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CAA 90 bp | CAGGCCAAGATGCTCGCCAGTGTCTGTGCTGAGGCAGCCAGCGCCTaGTCCGAACCCGATCCCCTTGGGGCCATACCTGCGCCCATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QAKMLASVCAEAASA*SEPDPLGAIPAPIA Trigger: TGCTATGGGCGCAGGTATGGCCCCAAGGGGATCGGGTTCGGACAAGGCGCTGGCTGCCTCAGCACAGACACTGGCGAGCATCTTGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS TCA 72 bp | GGAACTGCAGGCCAAGATGCTCGCCAGTGTCTGTGCTaGGGCAGCCAGCGCCTTGTCCGAACCCGATCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GTAGQDARQCLC*GSQRLVRTRSP Trigger: AGGGGATCGGGTTCGGACAAGGCGCTGGCTGCCTCAGCACAGACACTGGCGAGCATCTTGGCCTGCAGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS GCA 72 bp | GTGGCTGCTCGAGCTGGCTTTGGGGATTGTTGGAACTaGAGGCCAAGATGCTCGCCAGTGTCTGTGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VAARAGFGDCWN*RPRCSPVSVLR Trigger: CCTCAGCACAGACACTGGCGAGCATCTTGGCCTGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS GCA 72 bp | CGCCTTGTCCGAACCCGATCCCCTTGGGGCCATACCTaGGCCCATAGCACACCTTACAGTAGATCTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: RLVRTRSPWGHT*AHSTPYSRSLT Trigger: AGTCAGAGATCTACTGTAAGGTGTGCTATGGGCGCAGGTATGGCCCCAAGGGGATCGGGTTCGGACAAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CCA 72 bp | CTTGTGGTGGCTGCTCGAGCTGGCTTTGGGGATTGTTaGAACTGCAGGCCAAGATGCTCGCCAGTGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVVAARAGFGDC*NCRPRCSPVSV Trigger: CACAGACACTGGCGAGCATCTTGGCCTGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CAA 72 bp | GCTTGTGGTGGCTGCTCGAGCTGGCTTTGGGGATTGTaGGAACTGCAGGCCAAGATGCTCGCCAGTGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ACGGCSSWLWGL*ELQAKMLASVC Trigger: ACAGACACTGGCGAGCATCTTGGCCTGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CAA 72 bp | GTTGCTTGTGGTGGCTGCTCGAGCTGGCTTTGGGGATaGTTGGAACTGCAGGCCAAGATGCTCGCCAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VACGGCSSWLWG*LELQAKMLASV Trigger: GACACTGGCGAGCATCTTGGCCTGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS GCA 72 bp | CATGAGCTGCCACTGTGGTGCTGTCCAGAGCTTTCCTaGAGGCCATGCAGTGGAAACAGGTCTTGTGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HELPLWCCPELS*RPCSGNRSCGN Trigger: GTTTCCACAAGACCTGTTTCCACTGCATGGCCTGCAGGAAAGCTCTGGACAGCACCACAGTGGCAGCTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 ENSMUST00000208050.2 |
||
| CDS CCA 72 bp | GAATTTGGAAGGGTTGCTTGTGGTGGCTGCTCGAGCTaGCTTTGGGGATTGTTGGAACTGCAGGCCAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: EFGRVACGGCSS*LWGLLELQAKM Trigger: CATCTTGGCCTGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS GCA 72 bp | CTTTGCAGAGAATTTGGAAGGGTTGCTTGTGGTGGCTaGTCGAGCTGGCTTTGGGGATTGTTGGAACTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCREFGRVACGG*SSWLWGLLELQ Trigger: CTGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CAA 72 bp | GGGCACTTCTCTGATTCTCCAAACTTTGCAGAGAATTaGGAAGGGTTGCTTGTGGTGGCTGCTCGAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GHFSDSPNFAEN*EGLLVVAARAG Trigger: GCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGAAGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CAA 90 bp | CCACATCGTGGGCACTTCTCTGATTCTCCAAACTTTGCAGAGAATTaGGAAGGGTTGCTTGTGGTGGCTGCTCGAGCTGGCTTTGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PHRGHFSDSPNFAEN*EGLLVVAARAGFGD Trigger: ATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGAAGTGCCCACGATGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CAA 90 bp | GGGCACTTCTCTGATTCTCCAAACTTTGCAGAGAATTTGGAAGGGTaGCTTGTGGTGGCTGCTCGAGCTGGCTTTGGGGATTGTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GHFSDSPNFAENLEG*LVVAARAGFGDCWN Trigger: GTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGAAGTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CCA 72 bp | CTCCAAACTTTGCAGAGAATTTGGAAGGGTTGCTTGTaGTGGCTGCTCGAGCTGGCTTTGGGGATTGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LQTLQRIWKGCL*WLLELALGIVG Trigger: TCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
||
| CDS CCA 72 bp | GGCACTTCTCTGATTCTCCAAACTTTGCAGAGAATTTaGAAGGGTTGCTTGTGGTGGCTGCTCGAGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GTSLILQTLQRI*KGCLWWLLELA Trigger: AGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGAAGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS CCA 72 bp | CAAACTTTGCAGAGAATTTGGAAGGGTTGCTTGTGGTaGCTGCTCGAGCTGGCTTTGGGGATTGTTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: QTLQRIWKGCLW*LLELALGIVGT Trigger: AGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS CAA 72 bp | TCTGATTCTCCAAACTTTGCAGAGAATTTGGAAGGGTaGCTTGTGGTGGCTGCTCGAGCTGGCTTTGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SDSPNFAENLEG*LVVAARAGFGD Trigger: ATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS CAA 90 bp | ACTTCTCTGATTCTCCAAACTTTGCAGAGAATTTGGAAGGGTTGCTaGTGGTGGCTGCTCGAGCTGGCTTTGGGGATTGTTGGAACTGCA | + |
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Preference number: 6 (lower is better) Translates to: TSLILQTLQRIWKGC*WWLLELALGIVGTA Trigger: TGCAGTTCCAACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS CAA 72 bp | ATTCTCCAAACTTTGCAGAGAATTTGGAAGGGTTGCTaGTGGTGGCTGCTCGAGCTGGCTTTGGGGATTGTT | + |
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Preference number: 6 (lower is better) Translates to: ILQTLQRIWKGC*WWLLELALGIV Trigger: AACAATCCCCAAAGCCAGCTCGAGCAGCCACCACAAGCAACCCTTCCAAATTCTCTGCAAAGTTTGGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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| CDS GCA 72 bp | CTTGTGGAAACTCCTCCCATTGCACTGGATTTCTTCTaGATGGTAGACCGTCTTTTCACAGGCTCCACATTT | + |
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Preference number: 6 (lower is better) Translates to: LVETPPIALDFF*MVDRLFTGSTF Trigger: AAATGTGGAGCCTGTGAAAAGACGGTCTACCATGCAGAAGAAATCCAGTGCAATGGGAGGAGTTTCCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 ENSMUST00000208050.2 |
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| CDS TCA 72 bp | AGCGTATACCGACTTTCCACATCGTGGGCACTTCTCTaGTTCTCCAAACTTTGCAGAGAATTTGGAAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SVYRLSTSWALL*FSKLCREFGRV Trigger: AACCCTTCCAAATTCTCTGCAAAGTTTGGAGAATCAGAGAAGTGCCCACGATGTGGAAAGTCGGTATACGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032658.14 ENSMUST00000167786.4 |
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