Pregenerated sensors for CSRNP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044636Ensembl transcript IDs: ENSMUST00000061457.7
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGTCCAAGAGCTGCAGCAGTGCACCACAGTTCTAGGCCTAGACTaGGGGACTGGCTCTGCATCTGTGACACAGGCCCAGCCGTCCCGG | + |
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Preference number: 1 (lower is better) Translates to: GVQELQQCTTVLGLD*GTGSASVTQAQPSR Trigger: CCGGGACGGCTGGGCCTGTGTCACAGATGCAGAGCCAGTCCCTCAGTCTAGGCCTAGAACTGTGGTGCACTGCTGCAGCTCTTGGACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR CCA 90 bp | AGAGCTGCAGCAGTGCACCACAGTTCTAGGCCTAGACTGAGGGACTaGCTCTGCATCTGTGACACAGGCCCAGCCGTCCCGGCAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: RAAAVHHSSRPRLRD*LCICDTGPAVPATR Trigger: CCTGGTTGCCGGGACGGCTGGGCCTGTGTCACAGATGCAGAGCCAGTCCCTCAGTCTAGGCCTAGAACTGTGGTGCACTGCTGCAGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR CCA 90 bp | TCTTTGTTCTGGCGGCCCAGAGAGCTCGGTACGGGACACTGCAGCTaGGGCTGGTCTCCTGGGAACGCTCTCTCAGAAACACATGGACTA | + |
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Preference number: 1 (lower is better) Translates to: SLFWRPRELGTGHCS*GWSPGNALSETHGL Trigger: TAGTCCATGTGTTTCTGAGAGAGCGTTCCCAGGAGACCAGCCCCAGCTGCAGTGTCCCGTACCGAGCTCTCTGGGCCGCCAGAACAAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR GCA 90 bp | CTCGCATCCTTGGTTCTGGCACTAGGCATAAAGAGCTGCTTGAGCTaGCCAGCTCACTCTGTGATCGACATCTTTGTTCTGGCGGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: LASLVLALGIKSCLS*PAHSVIDIFVLAAQ Trigger: CTGGGCCGCCAGAACAAAGATGTCGATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCCTAGTGCCAGAACCAAGGATGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR GCA 90 bp | GAGAGCCAGACAAGCTTTGGGTTCACATTGAGAGTCCAACCTGTGTaGAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACC | + |
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Preference number: 1 (lower is better) Translates to: ESQTSFGFTLRVQPV*RIRGDGVQELQQCT Trigger: GGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR GCA 90 bp | CATACTGGACCCTGCCCCATGTGCAAGTCACATCCCTACCCAGCCTaGATTTCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGC | + |
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Preference number: 1 (lower is better) Translates to: HTGPCPMCKSHPYPA*ISPSKTDVSLSCRS Trigger: GCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGAAATGCAGGCTGGGTAGGGATGTGACTTGCACATGGGGCAGGGTCCAGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR CCA 90 bp | CTGCAGCTGGGGCTGGTCTCCTGGGAACGCTCTCTCAGAAACACATaGACTAACAATCCTTTCCTACCCATTTTCCTAAGACTTCCAACA | + |
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Preference number: 1 (lower is better) Translates to: LQLGLVSWERSLRNT*TNNPFLPIFLRLPT Trigger: TGTTGGAAGTCTTAGGAAAATGGGTAGGAAAGGATTGTTAGTCCATGTGTTTCTGAGAGAGCGTTCCCAGGAGACCAGCCCCAGCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 90 bp | AGCAAAAGTTGTTTTCAGAGAGCCAGACAAGCTTTGGGTTCACATTaGGAGTCCAACCTGTGTGCAGAATCCGAGGAGACGGTGTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SKSCFQRARQALGSH*ESNLCAESEETVSK Trigger: CTTGGACACCGTCTCCTCGGATTCTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTCTGAAAACAACTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 90 bp | TTCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGCACATATaGAAGAAAGAATTCAGGTACAGACCAGGGATCCCCAGTTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: FTFQDRCFTLVPKHI*KKEFRYRPGIPSLQ Trigger: CTGCAAACTGGGGATCCCTGGTCTGTACCTGAATTCTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 90 bp | CCATACATCGTGTCCGACTCAGGTAGCACCAGAACTGAGATGGACTaGGTTGTAGAAGAGGTTCTTTGCTTGACATTGTCAACGCTAAGT | + |
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Preference number: 1 (lower is better) Translates to: PYIVSDSGSTRTEMD*VVEEVLCLTLSTLS Trigger: ACTTAGCGTTGACAATGTCAAGCAAAGAACCTCTTCTACAACTCAGTCCATCTCAGTTCTGGTGCTACCTGAGTCGGACACGATGTATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR GCA 90 bp | TACCCAGCCTGCATTTCACCTTCCAAGACAGATGTTTCACTCTCGTaGCGAAGCACATATGAAAGAAAGAATTCAGGTACAGACCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: YPACISPSKTDVSLS*RSTYERKNSGTDQG Trigger: TCCCTGGTCTGTACCTGAATTCTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGAAATGCAGGCTGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR CCA 90 bp | ACAAAAACAAAAGCCAATGAAACCCAAGAAGAGACAGTGGCAGAATaGGCAGAACACCAGCATCCAGTTAAATACAAGGTCCTCCGGGCT | + |
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Preference number: 1 (lower is better) Translates to: TKTKANETQEETVAE*AEHQHPVKYKVLRA Trigger: AGCCCGGAGGACCTTGTATTTAACTGGATGCTGGTGTTCTGCCCATTCTGCCACTGTCTCTTCTTGGGTTTCATTGGCTTTTGTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR GCA 90 bp | CCGAGTCCCCTCCTGTCCCAACAAACTTTCAAAAAGATTCTTCTTTaGATCAACATCATCTCAGCTAAGCTTGAGTCTGAGAGGTCTAGC | + |
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Preference number: 1 (lower is better) Translates to: PSPLLSQQTFKKILL*INIISAKLESERSS Trigger: GCTAGACCTCTCAGACTCAAGCTTAGCTGAGATGATGTTGATGCAAAGAAGAATCTTTTTGAAAGTTTGTTGGGACAGGAGGGGACTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR TCA 90 bp | AACCTGTGTGCAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACCAAGAAGACAGGGTGTTTaGGGAGCCAGCATGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: NLCAESEETVSKSCSSAPRRQGV*GASMWC Trigger: GCACCACATGCTGGCTCCTCAAACACCCTGTCTTCT...TGGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACACAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGTACACCTGCAGTCACAACACTCAGGATGCATGACTAGGTTGGAGGCCGGAGCCAGCATGTGGTaGAGGGAGCTGCTCGCATCC | + |
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Preference number: 2 (lower is better) Translates to: RDVHLQSQHSGCMTRLEAGASMW*RELLAS Trigger: GGATGCGAGCAGCTCCCTGCACCACATGCTGGCTCC...GGCCTCCAACCTAGTCATGCATCCTGAGTGTTGTGACTGCAGGTGTACATCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CCA 90 bp | AACCTGTGTGCAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACCACCTAGACTGAGGGACTaGCTCTGCATCTGTGACACA | + |
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Preference number: 2 (lower is better) Translates to: NLCAESEETVSKSCSSAPPRLRD*LCICDT Trigger: TGTGTCACAGATGCAGAGCCAGTCCCTCAGTCTAGG...TGGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACACAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CCA 90 bp | GAATCCTCTGGAATGTGGGACTCCTATGTCATAACTAAGAAGCAGTCTGACTTCACGGGACACTGCAGCTaGGGCTGGTCTCCTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: ESSGMWDSYVITKKQSDFTGHCS*GWSPGN Trigger: GTTCCCAGGAGACCAGCCCCAGCTGCAGTGTCCCGT...GAAGTCAGACTGCTTCTTAGTTATGACATAGGAGTCCCACATTCCAGAGGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR CAA 90 bp | AGAGAGTGGATGTGTGTGTGTGTTGCACTAGGTGAGAGAGCAAGCTaGACAAAACCATCTTCCAGACTGTTCCATACTGGACCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: REWMCVCVALGERAS*TKPSSRLFHTGPCP Trigger: GGGGCAGGGTCCAGTATGGAACAGTCTGGAAGATGGTTTTGTCAAGCTTGCTCTCTCACCTAGTGCAACACACACACACATCCACTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR TCA 90 bp | AGAGATGTACACCTGCAGTCACAACACTCAGGATGCATGACTAGGTTGGAGGCCCGTTCTAGACTCAGCTaGGTGGCCTTTCCACTAAAG | + |
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Preference number: 2 (lower is better) Translates to: RDVHLQSQHSGCMTRLEARSRLS*VAFPLK Trigger: CTTTAGTGGAAAGGCCACTCAGCTGAGTCTAGAACG...GGCCTCCAACCTAGTCATGCATCCTGAGTGTTGTGACTGCAGGTGTACATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAGGCAGAGGTAGCACTGCCAATCAAGAAGCCCGTGCTAAATGGGGACCTGTGCCGAAGCACATATaGAAGAAAGAATTCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: PGGRGSTANQEARAKWGPVPKHI*KKEFRY Trigger: GTACCTGAATTCTTTCTTTCATATGTGCTTCGGCAC...AGGTCCCCATTTAGCACGGGCTTCTTGATTGGCAGTGCTACCTCTGCCTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR GCA 90 bp | AGTTTTCATGAATCTCCAAGATGGAAGGCTCCAAAACACACGTGCCACTCTTGGGGACCCTGCCCCATGTaGAAGTCACATCCCTACCCA | + |
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Preference number: 2 (lower is better) Translates to: SFHESPRWKAPKHTCHSWGPCPM*KSHPYP Trigger: TGGGTAGGGATGTGACTTGCACATGGGGCAGGGTCC...CCAAGAGTGGCACGTGTGTTTTGGAGCCTTCCATCTTGGAGATTCATGAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR TCA 90 bp | TCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGCACATATGAAAGAAAGGCCCAGCTCACTCTGTaGTCGACATCTTTGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SPSKTDVSLSCRSTYERKAQLTL*STSLFW Trigger: CCAGAACAAAGATGTCGATCACAGAGTGAGCTGGGC...CTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR GCA 90 bp | GTTTCACTCTCGTGCCGAAGCACATATGAAAGAAAGAATTCAGGTACAGACCAGAAGAGCTGCTTGAGCTaGCCAGCTCACTCTGTGATC | + |
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Preference number: 2 (lower is better) Translates to: VSLSCRSTYERKNSGTDQKSCLS*PAHSVI Trigger: GATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTT...CTGGTCTGTACCTGAATTCTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CCA 90 bp | GAATCCTCTGGAATGTGGGACTCCTATGTCATAACTAAGAAGCAGTCTGACTTCCATGAATCTCCAAGATaGAAGGCTCCAAAACACACG | + |
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Preference number: 2 (lower is better) Translates to: ESSGMWDSYVITKKQSDFHESPR*KAPKHT Trigger: CGTGTGTTTTGGAGCCTTCCATCTTGGAGATTCATG...GAAGTCAGACTGCTTCTTAGTTATGACATAGGAGTCCCACATTCCAGAGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTCTGCTGCCACATACATTGATTGTTTATGACACCAGGGCCTTATTATCTAGTCCTATGTCTCGATaGCCTGTACTGCAGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: MFLLPHTLIVYDTRALLSSPMSR*PVLQCT Trigger: TGTGCACTGCAGTACAGGTCATCGAGACATAGGACT...AGATAATAAGGCCCTGGTGTCATAAACAATCAATGTATGTGGCAGCAGAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR GCA 72 bp | TTGTTCTGGCGGCCCAGAGAGCTCGGTACGGGACACTaGAGCTGGGGCTGGTCTCCTGGGAACGCTCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: LFWRPRELGTGH*SWGWSPGNALS Trigger: TGAGAGAGCGTTCCCAGGAGACCAGCCCCAGCTGCAGTGTCCCGTACCGAGCTCTCTGGGCCGCCAGAACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR CCA 72 bp | GCAGTGCACCACAGTTCTAGGCCTAGACTGAGGGACTaGCTCTGCATCTGTGACACAGGCCCAGCCGTCCCG | + |
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Preference number: 3 (lower is better) Translates to: AVHHSSRPRLRD*LCICDTGPAVP Trigger: CGGGACGGCTGGGCCTGTGTCACAGATGCAGAGCCAGTCCCTCAGTCTAGGCCTAGAACTGTGGTGCACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 72 bp | GAGCTGCAGCAGTGCACCACAGTTCTAGGCCTAGACTaGGGGACTGGCTCTGCATCTGTGACACAGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: ELQQCTTVLGLD*GTGSASVTQAQ Trigger: CTGGGCCTGTGTCACAGATGCAGAGCCAGTCCCTCAGTCTAGGCCTAGAACTGTGGTGCACTGCTGCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CAA 90 bp | TGTGCAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACCACAGTTCGGCATAAAGAGCTGCTaGAGCTGCCCAGCTCACTCT | + |
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Preference number: 3 (lower is better) Translates to: CAESEETVSKSCSSAPQFGIKSC*SCPAHS Trigger: AGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCC...GAACTGTGGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 72 bp | TCCACTAAAGTGGCTGCTACAAGAAGACAGGGTGTTTaGGGAGCCAGCATGTGGTGCAGGGAGCTGCTCGCA | + |
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Preference number: 3 (lower is better) Translates to: STKVAATRRQGV*GASMWCRELLA Trigger: TGCGAGCAGCTCCCTGCACCACATGCTGGCTCCTCAAACACCCTGTCTTCTTGTAGCAGCCACTTTAGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR GCA 72 bp | TCTTCCAGACTGTTCCATACTGGACCCTGCCCCATGTaGAAGTCACATCCCTACCCAGCCTGCATTTCACCT | + |
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Preference number: 3 (lower is better) Translates to: SSRLFHTGPCPM*KSHPYPACISP Trigger: AGGTGAAATGCAGGCTGGGTAGGGATGTGACTTGCACATGGGGCAGGGTCCAGTATGGAACAGTCTGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CAA 90 bp | GCCCGAGCTCACGAGAGGAGCAGCTCTTCTGCTGAGGTAAGTGTTGAGTCTGAGAAGCTCCTGGGAGTTTaGTATCGAAGCACTCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: ARAHERSSSSAEVSVESEKLLGV*YRSTLL Trigger: CAGAAGAGTGCTTCGATACAAAACTCCCAGGAGCTT...CTCAGACTCAACACTTACCTCAGCAGAAGAGCTGCTCCTCTCGTGAGCTCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CAA 90 bp | TGTGCAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACCACAGTTCACACACGTGCCACTCTaGGGATTGAACTGTAAACTC | + |
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Preference number: 3 (lower is better) Translates to: CAESEETVSKSCSSAPQFTHVPL*GLNCKL Trigger: GAGTTTACAGTTCAATCCCAAGAGTGGCACGTGTGT...GAACTGTGGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 72 bp | ACTCTTCTGGGGCCTCCTCTCCGTTCTAGACTCAGCTaGGTGGCCTTTCCACTAAAGTGGCTGCTACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: TLLGPPLRSRLS*VAFPLKWLLQE Trigger: TTCTTGTAGCAGCCACTTTAGTGGAAAGGCCACTCAGCTGAGTCTAGAACGGAGAGGAGGCCCCAGAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR GCA 72 bp | ACAAGCTTTGGGTTCACATTGAGAGTCCAACCTGTGTaGAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: TSFGFTLRVQPV*RIRGDGVQELQ Trigger: CTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CAA 90 bp | AACCTGTGTGCAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACCAGTGCCACTCTTGGGATaGAACTGTAAACTCCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: NLCAESEETVSKSCSSAPVPLLG*NCKLQR Trigger: TCTTTGGAGTTTACAGTTCAATCCCAAGAGTGGCAC...TGGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACACAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCAAGATGGAAGGCTCCAAAACACACGTGCCACTCTTGGGATTGAACTGTGAGCTGCTCGCATCCTaGGTTCTGGCACTAGGCATA | + |
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Preference number: 3 (lower is better) Translates to: ISKMEGSKTHVPLLGLNCELLAS*VLALGI Trigger: TATGCCTAGTGCCAGAACCAAGGATGCGAGCAGCTC...ACAGTTCAATCCCAAGAGTGGCACGTGTGTTTTGGAGCCTTCCATCTTGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 72 bp | GAGGGCAGTTACAGAGGGAAGAGTCCTATGTCTCGATaGCCTGTACTGCAGTGCACATTCCATTCAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: EGSYRGKSPMSR*PVLQCTFHSEP Trigger: TGGCTCTGAATGGAATGTGCACTGCAGTACAGGTCATCGAGACATAGGACTCTTCCCTCTGTAACTGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR CCA 72 bp | AAGCTTGACAAAACCATCTTCCAGACTGTTCCATACTaGACCCTGCCCCATGTGCAAGTCACATCCCTACCC | + |
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Preference number: 3 (lower is better) Translates to: KLDKTIFQTVPY*TLPHVQVTSLP Trigger: GGGTAGGGATGTGACTTGCACATGGGGCAGGGTCCAGTATGGAACAGTCTGGAAGATGGTTTTGTCAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CAA 90 bp | TCAGGAAACACCAAGGGGTTGGGGCAGAATAAACGTTTAAAGCTCCTGGGAGTTAAGAAGACAGGGTGTTaGAGGAGCCAGCATGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: SGNTKGLGQNKRLKLLGVKKTGC*RSQHVV Trigger: CACCACATGCTGGCTCCTCAAACACCCTGTCTTCTT...AACTCCCAGGAGCTTTAAACGTTTATTCTGCCCCAACCCCTTGGTGTTTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CAA 90 bp | TGTGCAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACCACAGTTCAGAAATATCTTGGGGTaGGCTAGTCTTTACGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: CAESEETVSKSCSSAPQFRNILG*ASLYVS Trigger: AGAAACGTAAAGACTAGCCAACCCCAAGATATTTCT...GAACTGTGGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 72 bp | AAGAACTTTCTAACCCCACACAACCAAGAATGGCCGTaGGGGCAGTTACAGAGGGAAGAGTCCTATGTCTCG | + |
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Preference number: 3 (lower is better) Translates to: KNFLTPHNQEWP*GQLQREESYVS Trigger: CGAGACATAGGACTCTTCCCTCTGTAACTGCCCTCACGGCCATTCTTGGTTGTGTGGGGTTAGAAAGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 72 bp | TGTTTTCAGAGAGCCAGACAAGCTTTGGGTTCACATTaGGAGTCCAACCTGTGTGCAGAATCCGAGGAGACG | + |
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Preference number: 3 (lower is better) Translates to: CFQRARQALGSH*ESNLCAESEET Trigger: CGTCTCCTCGGATTCTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTCTGAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR GCA 72 bp | TTGGTTCTGGCACTAGGCATAAAGAGCTGCTTGAGCTaGCCAGCTCACTCTGTGATCGACATCTTTGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LVLALGIKSCLS*PAHSVIDIFVL Trigger: CAGAACAAAGATGTCGATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCCTAGTGCCAGAACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR CCA 72 bp | GGGCTGGTCTCCTGGGAACGCTCTCTCAGAAACACATaGACTAACAATCCTTTCCTACCCATTTTCCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: GLVSWERSLRNT*TNNPFLPIFLR Trigger: TCTTAGGAAAATGGGTAGGAAAGGATTGTTAGTCCATGTGTTTCTGAGAGAGCGTTCCCAGGAGACCAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CAA 90 bp | AGCCTGCATTTCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGCACATAGGAAACACCAAGGGGTaGGGGCAGAATAAACGTTTA | + |
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Preference number: 3 (lower is better) Translates to: SLHFTFQDRCFTLVPKHIGNTKG*GQNKRL Trigger: TAAACGTTTATTCTGCCCCAACCCCTTGGTGTTTCC...TATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGAAATGCAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR-3UTR CAA 90 bp | TTCAGAGAGCCAGACAAGCTTTGGGTTCACATTGAGAGTCCAACCTGTGTGCAGCTGCTGCCACATACATaGATTGTTTATGACACCAGG | + |
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Preference number: 3 (lower is better) Translates to: FREPDKLWVHIESPTCVQLLPHT*IVYDTR Trigger: CCTGGTGTCATAAACAATCAATGTATGTGGCAGCAG...CTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| 3UTR TCA 72 bp | GTGTCCGACTCAGGTAGCACCAGAACTGAGATGGACTaGGTTGTAGAAGAGGTTCTTTGCTTGACATTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VSDSGSTRTEMD*VVEEVLCLTLS Trigger: TGACAATGTCAAGCAAAGAACCTCTTCTACAACTCAGTCCATCTCAGTTCTGGTGCTACCTGAGTCGGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| 3UTR CCA 72 bp | AGCAGTCTGACTTCCAGTTTTCATGAATCTCCAAGATaGAAGGCTCCAAAACACACGTGCCACTCTTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SSLTSSFHESPR*KAPKHTCHSWD Trigger: ATCCCAAGAGTGGCACGTGTGTTTTGGAGCCTTCCATCTTGGAGATTCATGAAAACTGGAAGTCAGACTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTTCTGCTGCCACATACATTGATTGTTTATGACACCAGGGCCTTATTATCTCCAGGGATCCCCAGTTaGCAGATCAGGTCAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: MFLLPHTLIVYDTRALLSPGIPS*QIRSGN Trigger: GTTTCCTGACCTGATCTGCAAACTGGGGATCCCTGG...AGATAATAAGGCCCTGGTGTCATAAACAATCAATGTATGTGGCAGCAGAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| 3UTR TCA 72 bp | TGGAAGGCTCCAAAACACACGTGCCACTCTTGGGATTaGACTGTAAACTCCAAAGAACTTTCTAACCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: WKAPKHTCHSWD*TVNSKELSNPT Trigger: TGTGGGGTTAGAAAGTTCTTTGGAGTTTACAGTTCAATCCCAAGAGTGGCACGTGTGTTTTGGAGCCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| 3UTR CCA 72 bp | AGAGCAAAAGTTGTTTTCAGAGAGCCAGACAAGCTTTaGGTTCACATTGAGAGTCCAACCTGTGTGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RAKVVFREPDKL*VHIESPTCVQN Trigger: ATTCTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTCTGAAAACAACTTTTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| 3UTR CCA 72 bp | CAAAAACAAAAGCCAATGAAACCCAAGAAGAGACAGTaGCAGAATGGGCAGAACACCAGCATCCAGTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QKQKPMKPKKRQ*QNGQNTSIQLN Trigger: ATTTAACTGGATGCTGGTGTTCTGCCCATTCTGCCACTGTCTCTTCTTGGGTTTCATTGGCTTTTGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| 3UTR GCA 72 bp | TGCATTTCACCTTCCAAGACAGATGTTTCACTCTCGTaGCGAAGCACATATGAAAGAAAGAATTCAGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: CISPSKTDVSLS*RSTYERKNSGT Trigger: TGTACCTGAATTCTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGAAATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | GCCCGAGCTCACGAGAGGAGCAGCTCTTCTGCTGAGGTAAGTGTTGAGTCTGAGGCAGCTGAGCCTGGATaGGAATGGGGGCCGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARAHERSSSSAEVSVESEAAEPG*EWGPRG Trigger: GCCTCGCGGCCCCCATTCTCATCCAGGCTCAGCTGC...CTCAGACTCAACACTTACCTCAGCAGAAGAGCTGCTCCTCTCGTGAGCTCGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGGCAGAGGTAGCACTGCCAATCAAGAAGCCCGTGCTAAATGGGGACCTGGGCTCCTCCTCTGCTaGTGGGCGACTCACCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGGRGSTANQEARAKWGPGLLLC*WATHLP Trigger: CGGCAGGTGAGTCGCCCAGCAGCAGAGGAGGAGCCC...AGGTCCCCATTTAGCACGGGCTTCTTGATTGGCAGTGCTACCTCTGCCTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | AGAGAGCTCGGTACGGGACACTGCAGCTGGGGCTGGTCTCCTGGGAACGCTCTCTCTCGTTCTCGGCGATaGACTCCTGGAAGTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RELGTGHCSWGWSPGNALSRSRR*TPGSPV Trigger: CACAGGACTTCCAGGAGTTCATCGCCGAGAACGAGA...GAGAGCGTTCCCAGGAGACCAGCCCCAGCTGCAGTGTCCCGTACCGAGCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCTCGGTACGGGACACTGCAGCTGGGGCTGGTCTCCTGGGAACGCTCTCAGCTCCTCTGCACTCTaGAGATGCATCACTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RELGTGHCSWGWSPGNALSSSAL*RCITAV Trigger: GACTGCAGTGATGCATCTGCAGAGTGCAGAGGAGCT...GAGAGCGTTCCCAGGAGACCAGCCCCAGCTGCAGTGTCCCGTACCGAGCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACCACAGTTCAAGGAGCTCCCACCCTaGCTGGGCACGCTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CAESEETVSKSCSSAPQFKELPP*LGTLVK Trigger: CTTCACCAGCGTGCCCAGCCAGGGTGGGAGCTCCTT...GAACTGTGGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | AGAGAGCTCGGTACGGGACACTGCAGCTGGGGCTGGTCTCCTGGGAACGCTCTCACAGAGTTATGGCGTTaGGCCATTCCCAAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RELGTGHCSWGWSPGNALTELWR*AIPKEL Trigger: GAGCTCCTTGGGAATGGCCCAACGCCATAACTCTGT...GAGAGCGTTCCCAGGAGACCAGCCCCAGCTGCAGTGTCCCGTACCGAGCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | GGCACTAGGCATAAAGAGCTGCTTGAGCTGCCCAGCTCACTCTGTGATCGACATCCCGCCGCCGTTTGGTaGGCAGGGGCTGAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTRHKELLELPSSLCDRHPAAVW*AGAEGR Trigger: TCTTCCTTCAGCCCCTGCCCACCAAACGGCGGCGGG...ATGTCGATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCCTAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | GCCCGAGCTCACGAGAGGAGCAGCTCTTCTGCTGAGGTAAGTGTTGAGTCTGAGGACTCACCTGCCGCTTaGTCTCCAGCTCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARAHERSSSSAEVSVESEDSPAA*SPAPAS Trigger: TGAAGCTGGAGCTGGAGAGCAAGCGGCAGGTGAGTC...CTCAGACTCAACACTTACCTCAGCAGAAGAGCTGCTCCTCTCGTGAGCTCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | GGCACTAGGCATAAAGAGCTGCTTGAGCTGCCCAGCTCACTCTGTGATCGACATGGGGTTCCTCCAGGATaGACACGCCCAGGCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTRHKELLELPSSLCDRHGVPPG*TRPGSP Trigger: TGGAGAGCCTGGGCGTGTGCATCCTGGAGGAACCCC...ATGTCGATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCCTAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | GCCCGAGCTCACGAGAGGAGCAGCTCTTCTGCTGAGGTAAGTGTTGAGTCTGAGCCAGCTCCAGCTTCATaGTGGTGTGGAGGTAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARAHERSSSSAEVSVESEPAPAS*WCGGSE Trigger: CTCACTACCTCCACACCATCATGAAGCTGGAGCTGG...CTCAGACTCAACACTTACCTCAGCAGAAGAGCTGCTCCTCTCGTGAGCTCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGAGCCAGACAAGCTTTGGGTTCACATTGAGAGTCCAACCTGTGTGCAGGCTGGGCGACTCACCTaGCGCTTGCTCTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FREPDKLWVHIESPTCVQAGRLT*RLLSSS Trigger: GGAGCTGGAGAGCAAGCGGCAGGTGAGTCGCCCAGC...CTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | AACCTGTGTGCAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACCACTGCGTACAGAGTTATaGCGTTGGGCCATTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLCAESEETVSKSCSSAPLRTEL*RWAIPK Trigger: CTTGGGAATGGCCCAACGCCATAACTCTGTACGCAG...TGGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACACAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGAGCCAGACAAGCTTTGGGTTCACATTGAGAGTCCAACCTGTGTGCAGCAGGACGGAGGAACCTaGGGGCAGCTGAGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FREPDKLWVHIESPTCVQQDGGT*GQLSLD Trigger: ATCCAGGCTCAGCTGCCCCCAGGTTCCTCCGTCCTG...CTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCATGAATCTCCAAGATGGAAGGCTCCAAAACACACGTGCCACTCTTGGAGTCCTCCTCGGCCTTaGGCCGCTCCAGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFHESPRWKAPKHTCHSWSPPRP*AAPAPL Trigger: CAGAGGAGCTGGAGCGGCTCAAGGCCGAGGAGGACT...CCAAGAGTGGCACGTGTGTTTTGGAGCCTTCCATCTTGGAGATTCATGAAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | TCAGGAAACACCAAGGGGTTGGGGCAGAATAAACGTTTAAAGCTCCTGGGAGTTGAACCTGGGGGCAGCTaGGCCTGGATGAGAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNTKGLGQNKRLKLLGVEPGGS*AWMRMG Trigger: CCCCATTCTCATCCAGGCTCAGCTGCCCCCAGGTTC...AACTCCCAGGAGCTTTAAACGTTTATTCTGCCCCAACCCCTTGGTGTTTCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | AACCTGTGTGCAGAATCCGAGGAGACGGTGTCCAAGAGCTGCAGCAGTGCACCACTATGGTTCACCTCCTaGTCTTGCGCAAACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NLCAESEETVSKSCSSAPLWFTS*SCANSQ Trigger: CTGTGAGTTTGCGCAAGAGCAGGAGGTGAACCATAG...TGGTGCACTGCTGCAGCTCTTGGACACCGTCTCCTCGGATTCTGCACACAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | GCACTAGGCATAAAGAGCTGCTTGAGCTGCCCAGCTCACTCTGTGATCGACATCCTCTGCTGGGAGTTCTaGACTCCGCAGCCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALGIKSCLSCPAHSVIDILCWEF*TPQPSS Trigger: TGAAGAAGGCTGCGGAGTGCAGAACTCCCAGCAGAG...GATGTCGATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCCTAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCATTTCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGCACATAGCCGCAAGCCACCAGTaGGGTAACAGGGAGCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLHFTFQDRCFTLVPKHIAASHQ*GNRERE Trigger: TTCTCGCTCCCTGTTACCTCACTGGTGGCTTGCGGC...TATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGAAATGCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCATTTCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGCACATACGGTCCTCACTCTGCTaGGAGTTCTGCACTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHFTFQDRCFTLVPKHIRSSLC*EFCTPQ Trigger: CTGCGGAGTGCAGAACTCCCAGCAGAGTGAGGACCG...TATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGAAATGCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGAGCCAGACAAGCTTTGGGTTCACATTGAGAGTCCAACCTGTGTGCAGCATCGAATTTCCTCTTaGGGCCTGAGCCGGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: FREPDKLWVHIESPTCVQHRISS*GLSRRT Trigger: CGTTCTCCGGCTCAGGCCTCAAGAGGAAATTCGATG...CTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGGCAGAGGTAGCACTGCCAATCAAGAAGCCCGTGCTAAATGGGGACCTTTCATTTTCTTGGCGTaGAGTTTCTCCTCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGRGSTANQEARAKWGPFIFLA*SFSSFR Trigger: CCTGAAGGAGGAGAAACTTCACGCCAAGAAAATGAA...AGGTCCCCATTTAGCACGGGCTTCTTGATTGGCAGTGCTACCTCTGCCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | GTTCTGGCACTAGGCATAAAGAGCTGCTTGAGCTGCCCAGCTCACTCTGTGATCGGCAGCTGGGTGTTCTaGGTTCTCAGTAAAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VLALGIKSCLSCPAHSVIGSWVF*VLSKTQ Trigger: CTGTGTTTTACTGAGAACTCAGAACACCCAGCTGCC...GATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCCTAGTGCCAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | TCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGCACATATGAAAGAAAGTGGAAGTCCTGTGTCTaGGAGCTCTGCGCTCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSKTDVSLSCRSTYERKWKSCV*ELCAPG Trigger: GCCGGGAGCGCAGAGCTCGCAGACACAGGACTTCCA...CTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | GCACTAGGCATAAAGAGCTGCTTGAGCTGCCCAGCTCACTCTGTGATCGACATCCGGAGAATCTCTCTATaGTTCACCTCCTGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALGIKSCLSCPAHSVIDIRRISL*FTSCSC Trigger: GCAAGAGCAGGAGGTGAACCATAGAGAGATTCTCCG...GATGTCGATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCCTAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | AGAGATGTACACCTGCAGTCACAACACTCAGGATGCATGACTAGGTTGGAGGCCCATTTAATCCCAGCCTaGCTACAGGCGCATGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDVHLQSQHSGCMTRLEAHLIPA*LQAHAS Trigger: AGAGGCATGCGCCTGTAGCCAGGCTGGGATTAAATG...GGCCTCCAACCTAGTCATGCATCCTGAGTGTTGTGACTGCAGGTGTACATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | GTTCTGGCACTAGGCATAAAGAGCTGCTTGAGCTGCCCAGCTCACTCTGTGATCTGTCCGCACTATCACTaGTGGACATCTCATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLALGIKSCLSCPAHSVICPHYH*WTSHHL Trigger: CAGATGATGAGATGTCCAGCAGTGATAGTGCGGACA...GATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCCTAGTGCCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | AGTTTTCATGAATCTCCAAGATGGAAGGCTCCAAAACACACGTGCCACTCTTGGCCGCTCCAGCTCCTCTaGACTCTGCAGATGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFHESPRWKAPKHTCHSWPLQLL*TLQMHH Trigger: GTGATGCATCTGCAGAGTGCAGAGGAGCTGGAGCGG...CCAAGAGTGGCACGTGTGTTTTGGAGCCTTCCATCTTGGAGATTCATGAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | GTTTCACTCTCGTGCCGAAGCACATATGAAAGAAAGAATTCAGGTACAGACCAGGGAGACCAAGAGGGGTaGAAGTCCTCGCTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLSCRSTYERKNSGTDQGDQEG*KSSLSG Trigger: GCCTGAGAGCGAGGACTTGCACCCCTCTTGGTCTCC...CTGGTCTGTACCTGAATTCTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| 3UTR CAA 72 bp | TTGGGGCAGAATAAACGTTTAAAGCTCCTGGGAGTTTaGTATCGAAGCACTCTTCTGGGGCCTCCTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LGQNKRLKLLGV*YRSTLLGPPLR Trigger: ACGGAGAGGAGGCCCCAGAAGAGTGCTTCGATACAAAACTCCCAGGAGCTTTAAACGTTTATTCTGCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR TCA 90 bp | ATGTTTCTGCTGCCACATACATTGATTGTTTATGACACCAGGGCCTTATTATCTGGCTGGGCCTTCCTCTaGCCCGGACTCTGCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MFLLPHTLIVYDTRALLSGWAFL*PGLCFH Trigger: GTGAAAGCAGAGTCCGGGTCAGAGGAAGGCCCAGCC...AGATAATAAGGCCCTGGTGTCATAAACAATCAATGTATGTGGCAGCAGAAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGAAACACCAAGGGGTTGGGGCAGAATAAACGTTTAAAGCTCCTGGGAGTTCTCCGTAGCTGCTTCTaGCTCTTCAGGATGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGNTKGLGQNKRLKLLGVLRSCF*LFRMDV Trigger: AACATCCATCCTGAAGAGGCAGAAGCAGCTACGGAG...AACTCCCAGGAGCTTTAAACGTTTATTCTGCCCCAACCCCTTGGTGTTTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | TCAGGAAACACCAAGGGGTTGGGGCAGAATAAACGTTTAAAGCTCCTGGGAGTTCACAGAGGGTGTAGCTaGGTACAGAGTTATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGNTKGLGQNKRLKLLGVHRGCS*VQSYGV Trigger: AACGCCATAACTCTGTACGCAGCTACACCCTCTGTG...AACTCCCAGGAGCTTTAAACGTTTATTCTGCCCCAACCCCTTGGTGTTTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCATTTCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGCACATATCAGATCTTTCTCTTTaGGGAAGGAGGCTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLHFTFQDRCFTLVPKHISDLSL*GRRLGL Trigger: AAGGCCCAGCCTCCTTCCCCAAAGAGAAAGATCTGA...TATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGAAATGCAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | GTTTCACTCTCGTGCCGAAGCACATATGAAAGAAAGAATTCAGGTACAGACCAGTCTGCACTCTGCAGATaGATCACTGCAGTCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLSCRSTYERKNSGTDQSALCR*ITAVSF Trigger: GAACGAGACTGCAGTGATGCATCTGCAGAGTGCAGA...CTGGTCTGTACCTGAATTCTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | GAATCCTCTGGAATGTGGGACTCCTATGTCATAACTAAGAAGCAGTCTGACTTCTCTCATCATCTGAGTTaGAGACTGACGAGCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: ESSGMWDSYVITKKQSDFSHHLS*RLTSPR Trigger: ACGTGGGCTCGTCAGTCTCCAACTCAGATGATGAGA...GAAGTCAGACTGCTTCTTAGTTATGACATAGGAGTCCCACATTCCAGAGGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | GTTTCACTCTCGTGCCGAAGCACATATGAAAGAAAGAATTCAGGTACAGACCAGGACATTCGATCCACCTaGCATTTAATCCCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLSCRSTYERKNSGTDQDIRST*HLIPAW Trigger: CCAGGCTGGGATTAAATGCCAGGTGGATCGAATGTC...CTGGTCTGTACCTGAATTCTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | GTTTCACTCTCGTGCCGAAGCACATATGAAAGAAAGAATTCAGGTACAGACCAGTTCTCCTCCTTCAGGTaGTCACGGAGAATCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VSLSCRSTYERKNSGTDQFSSFR*SRRISL Trigger: TAGAGAGATTCTCCGTGAGCACCTGAAGGAGGAGAA...CTGGTCTGTACCTGAATTCTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| 3UTR CAA 72 bp | ATGTGTGTGTGTGTTGCACTAGGTGAGAGAGCAAGCTaGACAAAACCATCTTCCAGACTGTTCCATACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MCVCVALGERAS*TKPSSRLFHTG Trigger: TCCAGTATGGAACAGTCTGGAAGATGGTTTTGTCAAGCTTGCTCTCTCACCTAGTGCAACACACACACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR GCA 90 bp | ATGTTTCTGCTGCCACATACATTGATTGTTTATGACACCAGGGCCTTATTATCTTTCACCTCCTGCTCTTaGGCAAACTCACAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MFLLPHTLIVYDTRALLSFTSCS*ANSQRV Trigger: CACCCTCTGTGAGTTTGCGCAAGAGCAGGAGGTGAA...AGATAATAAGGCCCTGGTGTCATAAACAATCAATGTATGTGGCAGCAGAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCTGCTGCCACATACATTGATTGTTTATGACACCAGGGCCTTATTATCTTTTCACTCCCACCACTaGCCTCTGCTCTACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MFLLPHTLIVYDTRALLSFHSHH*PLLYLV Trigger: TACCAGGTAGAGCAGAGGCCAGTGGTGGGAGTGAAA...AGATAATAAGGCCCTGGTGTCATAAACAATCAATGTATGTGGCAGCAGAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS TCA 90 bp | GTTCTTGCTTCTCTTCGGCGTCAATCCGGTGGACCCCGGAAGCCCTaGGCAGGGCCCGCCGCCGTTTGGTGGGCAGGGGCTGAAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: VLASLRRQSGGPRKP*AGPAAVWWAGAEGR Trigger: TCTTCCTTCAGCCCCTGCCCACCAAACGGCGGCGGGCCCTGCTCAGGGCTTCCGGGGTCCACCGGATTGACGCCGAAGAGAAGCAAGAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CCA 90 bp | CTCTGCAGATGCATCACTGCAGTCTCGTTCTCGGCGATGAACTCCTaGAAGTCCTGTGTCTGCGAGCTCTGCGCTCCCGGCAGGGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LCRCITAVSFSAMNS*KSCVCELCAPGRGS Trigger: GGAGCCCCTGCCGGGAGCGCAGAGCTCGCAGACACAGGACTTCCAGGAGTTCATCGCCGAGAACGAGACTGCAGTGATGCATCTGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS TCA 90 bp | CCTCTGCACTCTGCAGATGCATCACTGCAGTCTCGTTCTCGGCGATaGACTCCTGGAAGTCCTGTGTCTGCGAGCTCTGCGCTCCCGGCA | + |
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Preference number: 5 (lower is better) Translates to: PLHSADASLQSRSRR*TPGSPVSASSALPA Trigger: TGCCGGGAGCGCAGAGCTCGCAGACACAGGACTTCCAGGAGTTCATCGCCGAGAACGAGACTGCAGTGATGCATCTGCAGAGTGCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 90 bp | AGAGCCACTCGAGTCCTCCTCGGCCTTGAGCCGCTCCAGCTCCTCTaGACTCTGCAGATGCATCACTGCAGTCTCGTTCTCGGCGATGAA | + |
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Preference number: 5 (lower is better) Translates to: RATRVLLGLEPLQLL*TLQMHHCSLVLGDE Trigger: TTCATCGCCGAGAACGAGACTGCAGTGATGCATCTGCAGAGTGCAGAGGAGCTGGAGCGGCTCAAGGCCGAGGAGGACTCGAGTGGCTCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 90 bp | AGGGCTGAGTCTTCAGAGGTCCGGTCCTCACTCTGCTGGGAGTTCTaGACTCCGCAGCCTTCTTCATTGTCCGTTCGGAAGGGTAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RAESSEVRSSLCWEF*TPQPSSLSVRKGRL Trigger: AAGCCTACCCTTCCGAACGGACAATGAAGAAGGCTGCGGAGTGCAGAACTCCCAGCAGAGTGAGGACCGGACCTCTGAAGACTCAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS TCA 90 bp | AACACTCAGATCTTTCTCTTTGGGGAAGGAGGCTGGGCCTTCCTCTaGCCCGGACTCTGCTTTCACTCCCACCACTGGCCTCTGCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: NTQIFLFGEGGWAFL*PGLCFHSHHWPLLY Trigger: GTAGAGCAGAGGCCAGTGGTGGGAGTGAAAGCAGAGTCCGGGTCAGAGGAAGGCCCAGCCTCCTTCCCCAAAGAGAAAGATCTGAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CCA 90 bp | ATCCACCTGGCATTTAATCCCAGCCTGGCTACAGGCGCATGCCTCTaGGTCACAGTACAGCCGACAGTCACAACCACACTCTTCCCGAGA | + |
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Preference number: 5 (lower is better) Translates to: IHLAFNPSLATGACL*VTVQPTVTTTLFPR Trigger: TCTCGGGAAGAGTGTGGTTGTGACTGTCGGCTGTACTGTGACCCAGAGGCATGCGCCTGTAGCCAGGCTGGGATTAAATGCCAGGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS-3UTR CAA 90 bp | TTCAGAGAGCCAGACAAGCTTTGGGTTCACATTGAGAGTCCAACCTGTGTGCAGGCCTGGGCACAGCTCTaGGGGAACAGCCAGGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: FREPDKLWVHIESPTCVQAWAQL*GNSQGF Trigger: GAACCCCTGGCTGTTCCCCAAGAGCTGTGCCCAGGC...CTGCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 90 bp | TATGGTTCACCTCCTGCTCTTGCGCAAACTCACAGAGGGTGTAGCTaGGTACAGAGTTATGGCGTTGGGCCATTCCCAAGGAGCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: YGSPPALAQTHRGCS*VQSYGVGPFPRSSH Trigger: GTGGGAGCTCCTTGGGAATGGCCCAACGCCATAACTCTGTACGCAGCTACACCCTCTGTGAGTTTGCGCAAGAGCAGGAGGTGAACCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 90 bp | CATTCGATCCACCTGGCATTTAATCCCAGCCTGGCTACAGGCGCATaGCTCTGGGTCACAGTACAGCCGACAGTCACAACCACACTCTTC | + |
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Preference number: 5 (lower is better) Translates to: HSIHLAFNPSLATGA*LWVTVQPTVTTTLF Trigger: GAAGAGTGTGGTTGTGACTGTCGGCTGTACTGTGACCCAGAGGCATGCGCCTGTAGCCAGGCTGGGATTAAATGCCAGGTGGATCGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS-3UTR CAA 90 bp | CCAGGAGGCAGAGGTAGCACTGCCAATCAAGAAGCCCGTGCTAAATGGGGACCTTACAGAGTTATGGCGTaGGGCCATTCCCAAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: PGGRGSTANQEARAKWGPYRVMA*GHSQGA Trigger: AGCTCCTTGGGAATGGCCCAACGCCATAACTCTGTA...AGGTCCCCATTTAGCACGGGCTTCTTGATTGGCAGTGCTACCTCTGCCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS-3UTR CAA 90 bp | AGCCTGCATTTCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGCACATAGAGTCCTCCTCGGCCTaGAGCCGCTCCAGCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLHFTFQDRCFTLVPKHIESSSA*SRSSSS Trigger: AGAGGAGCTGGAGCGGCTCAAGGCCGAGGAGGACTC...TATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGAAATGCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS-3UTR CAA 90 bp | GCCCGAGCTCACGAGAGGAGCAGCTCTTCTGCTGAGGTAAGTGTTGAGTCTGAGGATGGCTCTGAGTTCTaGCTTCTCTTCGGCGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: ARAHERSSSSAEVSVESEDGSEF*LLFGVN Trigger: ATTGACGCCGAAGAGAAGCAAGAACTCAGAGCCATC...CTCAGACTCAACACTTACCTCAGCAGAAGAGCTGCTCCTCTCGTGAGCTCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 90 bp | ACAGTCACCTGGTCAAAGCGGACATTCTTCCTCCGTAGCTGCTTCTaGCTCTTCAGGATGGATGTTGGTGTGAAGCTGGCAGTCGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: TVTWSKRTFFLRSCF*LFRMDVGVKLAVVG Trigger: TCCTACGACTGCCAGCTTCACACCAACATCCATCCTGAAGAGGCAGAAGCAGCTACGGAGGAAGAATGTCCGCTTTGACCAGGTGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CCA 90 bp | CCTCCACTGACTCCACGGTCCCGTTCTTCGTCAGCTTCATTTTCTTaGCGTGAAGTTTCTCCTCCTTCAGGTGCTCACGGAGAATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: PPLTPRSRSSSASFS*REVSPPSGAHGESL Trigger: GAGAGATTCTCCGTGAGCACCTGAAGGAGGAGAAACTTCACGCCAAGAAAATGAAGCTGACGAAGAACGGGACCGTGGAGTCAGTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS-3UTR CAA 90 bp | GGCACTAGGCATAAAGAGCTGCTTGAGCTGCCCAGCTCACTCTGTGATCGACATATCTCATCATCTGAGTaGGAGACTGACGAGCCCACG | + |
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Preference number: 5 (lower is better) Translates to: GTRHKELLELPSSLCDRHISSSE*ETDEPT Trigger: CGTGGGCTCGTCAGTCTCCAACTCAGATGATGAGAT...ATGTCGATCACAGAGTGAGCTGGGCAGCTCAAGCAGCTCTTTATGCCTAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS TCA 90 bp | ACTGACTCCACGGTCCCGTTCTTCGTCAGCTTCATTTTCTTGGCGTaGAGTTTCTCCTCCTTCAGGTGCTCACGGAGAATCTCTCTATGG | + |
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Preference number: 5 (lower is better) Translates to: TDSTVPFFVSFIFLA*SFSSFRCSRRISLW Trigger: CCATAGAGAGATTCTCCGTGAGCACCTGAAGGAGGAGAAACTTCACGCCAAGAAAATGAAGCTGACGAAGAACGGGACCGTGGAGTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS-3UTR CAA 90 bp | GTTTCACTCTCGTGCCGAAGCACATATGAAAGAAAGAATTCAGGTACAGACCAGGTTCACCTCCTGCTCTaGCGCAAACTCACAGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: VSLSCRSTYERKNSGTDQVHLLL*RKLTEG Trigger: ACCCTCTGTGAGTTTGCGCAAGAGCAGGAGGTGAAC...CTGGTCTGTACCTGAATTCTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS-3UTR CAA 90 bp | TCACCTTCCAAGACAGATGTTTCACTCTCGTGCCGAAGCACATATGAAAGAAAGTCCTCGGGCAGGAGTTaGTTGAGGCTGGATGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SPSKTDVSLSCRSTYERKSSGRS*LRLDVF Trigger: GAAAACATCCAGCCTCAACAAACTCCTGCCCGAGGA...CTTTCTTTCATATGTGCTTCGGCACGAGAGTGAAACATCTGTCTTGGAAGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CCA 72 bp | TTATGGCGTTGGGCCATTCCCAAGGAGCTCCCACCCTaGCTGGGCACGCTGGTGAAGCCCTGTCGCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LWRWAIPKELPP*LGTLVKPCRRA Trigger: CGCCCGGCGACAGGGCTTCACCAGCGTGCCCAGCCAGGGTGGGAGCTCCTTGGGAATGGCCCAACGCCATAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 72 bp | ACAGCTCTTGGGGAACAGCCAGGGGTTCCTCCAGGATaGACACGCCCAGGCTCTCCATGCTGGAGTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: TALGEQPGVPPG*TRPGSPCWSPG Trigger: GCCTGGACTCCAGCATGGAGAGCCTGGGCGTGTGCATCCTGGAGGAACCCCTGGCTGTTCCCCAAGAGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CCA 72 bp | TGCATCACTGCAGTCTCGTTCTCGGCGATGAACTCCTaGAAGTCCTGTGTCTGCGAGCTCTGCGCTCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: CITAVSFSAMNS*KSCVCELCAPG Trigger: GCCGGGAGCGCAGAGCTCGCAGACACAGGACTTCCAGGAGTTCATCGCCGAGAACGAGACTGCAGTGATGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CAA 72 bp | CTCACAGAGGGTGTAGCTGCGTACAGAGTTATGGCGTaGGGCCATTCCCAAGGAGCTCCCACCCTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LTEGVAAYRVMA*GHSQGAPTLAG Trigger: CCCAGCCAGGGTGGGAGCTCCTTGGGAATGGCCCAACGCCATAACTCTGTACGCAGCTACACCCTCTGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CAA 90 bp | TTGCGCAAACTCACAGAGGGTGTAGCTGCGTACAGAGTTATGGCGTaGGGCCATTCCCAAGGAGCTCCCACCCTGGCTGGGCACGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LRKLTEGVAAYRVMA*GHSQGAPTLAGHAG Trigger: ACCAGCGTGCCCAGCCAGGGTGGGAGCTCCTTGGGAATGGCCCAACGCCATAACTCTGTACGCAGCTACACCCTCTGTGAGTTTGCGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CAA 90 bp | TCGCTCTCAGGCTCCTTAAGGCCGCAGTCCTCGGGCAGGAGTTTGTaGAGGCTGGATGTTTTCCCCACCTCTGGCTTACAGAGAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLSGSLRPQSSGRSL*RLDVFPTSGLQRAA Trigger: AGCTGCTCTCTGTAAGCCAGAGGTGGGGAAAACATCCAGCCTCAACAAACTCCTGCCCGAGGACTGCGGCCTTAAGGAGCCTGAGAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CAA 90 bp | TCCTCGCTCTCAGGCTCCTTAAGGCCGCAGTCCTCGGGCAGGAGTTaGTTGAGGCTGGATGTTTTCCCCACCTCTGGCTTACAGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLSGSLRPQSSGRS*LRLDVFPTSGLQRA Trigger: TGCTCTCTGTAAGCCAGAGGTGGGGAAAACATCCAGCCTCAACAAACTCCTGCCCGAGGACTGCGGCCTTAAGGAGCCTGAGAGCGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS TCA 72 bp | ATCTTTCTCTTTGGGGAAGGAGGCTGGGCCTTCCTCTaGCCCGGACTCTGCTTTCACTCCCACCACTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: IFLFGEGGWAFL*PGLCFHSHHWP Trigger: AGGCCAGTGGTGGGAGTGAAAGCAGAGTCCGGGTCAGAGGAAGGCCCAGCCTCCTTCCCCAAAGAGAAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 72 bp | CACCTGGCATTTAATCCCAGCCTGGCTACAGGCGCATaGCTCTGGGTCACAGTACAGCCGACAGTCACAACC | + |
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Preference number: 6 (lower is better) Translates to: HLAFNPSLATGA*LWVTVQPTVTT Trigger: GGTTGTGACTGTCGGCTGTACTGTGACCCAGAGGCATGCGCCTGTAGCCAGGCTGGGATTAAATGCCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CAA 72 bp | GGCTCCTTAAGGCCGCAGTCCTCGGGCAGGAGTTTGTaGAGGCTGGATGTTTTCCCCACCTCTGGCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: GSLRPQSSGRSL*RLDVFPTSGLQ Trigger: CTGTAAGCCAGAGGTGGGGAAAACATCCAGCCTCAACAAACTCCTGCCCGAGGACTGCGGCCTTAAGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS TCA 72 bp | TCTGCAGATGCATCACTGCAGTCTCGTTCTCGGCGATaGACTCCTGGAAGTCCTGTGTCTGCGAGCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: SADASLQSRSRR*TPGSPVSASSA Trigger: CGCAGAGCTCGCAGACACAGGACTTCCAGGAGTTCATCGCCGAGAACGAGACTGCAGTGATGCATCTGCAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 72 bp | CCTCCTGCTCTTGCGCAAACTCACAGAGGGTGTAGCTaGGTACAGAGTTATGGCGTTGGGCCATTCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PPALAQTHRGCS*VQSYGVGPFPR Trigger: CCTTGGGAATGGCCCAACGCCATAACTCTGTACGCAGCTACACCCTCTGTGAGTTTGCGCAAGAGCAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 72 bp | TCTAGGGCTGAGTCTTCAGAGGTCCGGTCCTCACTCTaGTGGGAGTTCTGCACTCCGCAGCCTTCTTCATTG | + |
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Preference number: 6 (lower is better) Translates to: SRAESSEVRSSL*WEFCTPQPSSL Trigger: CAATGAAGAAGGCTGCGGAGTGCAGAACTCCCAGCAGAGTGAGGACCGGACCTCTGAAGACTCAGCCCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CCA 72 bp | GCATTTAATCCCAGCCTGGCTACAGGCGCATGCCTCTaGGTCACAGTACAGCCGACAGTCACAACCACACTC | + |
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Preference number: 6 (lower is better) Translates to: AFNPSLATGACL*VTVQPTVTTTL Trigger: GAGTGTGGTTGTGACTGTCGGCTGTACTGTGACCCAGAGGCATGCGCCTGTAGCCAGGCTGGGATTAAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CAA 72 bp | TCAGGCTCCTTAAGGCCGCAGTCCTCGGGCAGGAGTTaGTTGAGGCTGGATGTTTTCCCCACCTCTGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SGSLRPQSSGRS*LRLDVFPTSGL Trigger: TAAGCCAGAGGTGGGGAAAACATCCAGCCTCAACAAACTCCTGCCCGAGGACTGCGGCCTTAAGGAGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 72 bp | AGTACACCAGAGGTCCACTGTTCAAGTAAGACGGGCTaGTCATCGGGGAGGCAGCTGGGTGTTCTGAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: STPEVHCSSKTG*SSGRQLGVLSS Trigger: AGAACTCAGAACACCCAGCTGCCTCCCCGATGAGCAGCCCGTCTTACTTGAACAGTGGACCTCTGGTGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS CCA 72 bp | AAAGACATTCGATCCACCTGGCATTTAATCCCAGCCTaGCTACAGGCGCATGCCTCTGGGTCACAGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: KDIRSTWHLIPA*LQAHASGSQYS Trigger: GCTGTACTGTGACCCAGAGGCATGCGCCTGTAGCCAGGCTGGGATTAAATGCCAGGTGGATCGAATGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 72 bp | TGGTCAAAGCGGACATTCTTCCTCCGTAGCTGCTTCTaGCTCTTCAGGATGGATGTTGGTGTGAAGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: WSKRTFFLRSCF*LFRMDVGVKLA Trigger: TGCCAGCTTCACACCAACATCCATCCTGAAGAGGCAGAAGCAGCTACGGAGGAAGAATGTCCGCTTTGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS GCA 72 bp | GTCACCTGGTCAAAGCGGACATTCTTCCTCCGTAGCTaGTTCTGCCTCTTCAGGATGGATGTTGGTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VTWSKRTFFLRS*FCLFRMDVGVK Trigger: CTTCACACCAACATCCATCCTGAAGAGGCAGAAGCAGCTACGGAGGAAGAATGTCCGCTTTGACCAGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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| CDS TCA 72 bp | ACGGTCCCGTTCTTCGTCAGCTTCATTTTCTTGGCGTaGAGTTTCTCCTCCTTCAGGTGCTCACGGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: TVPFFVSFIFLA*SFSSFRCSRRI Trigger: GATTCTCCGTGAGCACCTGAAGGAGGAGAAACTTCACGCCAAGAAAATGAAGCTGACGAAGAACGGGACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061457.7 |
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