Pregenerated sensors for CSRNP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032515Ensembl transcript IDs: ENSMUST00000035101.9, ENSMUST00000213936.2, ENSMUST00000214058.2, ENSMUST00000215916.2, ENSMUST00000216929.2
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCAGACTGGCAGGGTACACCGAAGCCTCGGCCCCAACACTGCCTaGCCACCCGCCAGAGAGGCTCCACCACTGCCGTCTCCATCCCCA | + |
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Preference number: 1 (lower is better) Translates to: AQTGRVHRSLGPNTA*PPAREAPPLPSPSP Trigger: TGGGGATGGAGACGGCAGTGGTGGAGCCTCTCTGGCGGGTGGGCAGGCAGTGTTGGGGCCGAGGCTTCGGTGTACCCTGCCAGTCTGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR TCA 90 bp | GGGGGCGTGAGGTGGGCCAGGGTCGAGTCAGTGCCCAGAAAGGCCTaGGACAGTGATCAGGGTGTGCTTCATGCCCTCTTAGGGCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GGVRWARVESVPRKA*DSDQGVLHALLGPL Trigger: CAGGGGCCCTAAGAGGGCATGAAGCACACCCTGATCACTGTCTCAGGCCTTTCTGGGCACTGACTCGACCCTGGCCCACCTCACGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR TCA 90 bp | GAGGTGGGCCAGGGTCGAGTCAGTGCCCAGAAAGGCCTGAGACAGTaGTCAGGGTGTGCTTCATGCCCTCTTAGGGCCCCTGGCTCACCA | + |
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Preference number: 1 (lower is better) Translates to: EVGQGRVSAQKGLRQ*SGCASCPLRAPGSP Trigger: TGGTGAGCCAGGGGCCCTAAGAGGGCATGAAGCACACCCTGATCACTGTCTCAGGCCTTTCTGGGCACTGACTCGACCCTGGCCCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR GCA 90 bp | GCTGTCTTTGGAGCAAGGAGCATCTTACAGTACAGAAAGAGGGACTaGGAGGCTCCAGGAGAGCCCCGCCCCTTCCTCCTTCAGGCATAC | + |
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Preference number: 1 (lower is better) Translates to: AVFGARSILQYRKRD*EAPGEPRPFLLQAY Trigger: GTATGCCTGAAGGAGGAAGGGGCGGGGCTCTCCTGGAGCCTCGCAGTCCCTCTTTCTGTACTGTAAGATGCTCCTTGCTCCAAAGACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR GCA 90 bp | TCGGCCCCAACACTGCCTGCCCACCCGCCAGAGAGGCTCCACCACTaGCGTCTCCATCCCCAAATAAATTACAGATATAAATTACATCTT | + |
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Preference number: 1 (lower is better) Translates to: SAPTLPAHPPERLHH*RLHPQINYRYKLHL Trigger: AAGATGTAATTTATATCTGTAATTTATTTGGGGATGGAGACGGCAGTGGTGGAGCCTCTCTGGCGGGTGGGCAGGCAGTGTTGGGGCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR CAA 90 bp | GGTTCACAGAAGCCCCTAAGGCCCTGCGCTCAGCCGTCGCTGTCTTaGGAGCAAGGAGCATCTTACAGTACAGAAAGAGGGACTGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: GSQKPLRPCAQPSLS*EQGASYSTERGTAR Trigger: CCTCGCAGTCCCTCTTTCTGTACTGTAAGATGCTCCTTGCTCCAAAGACAGCGACGGCTGAGCGCAGGGCCTTAGGGGCTTCTGTGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTCACCATCTTACAGAGGGGCTTTATAATCCATGGCCTTGGGGAGAGGGATACAGAAAGAGGGACTaGGAGGCTCCAGGAGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LAHHLTEGLYNPWPWGEGYRKRD*EAPGEP Trigger: GGGCTCTCCTGGAGCCTCGCAGTCCCTCTTTCTGTA...TCCCTCTCCCCAAGGCCATGGATTATAAAGCCCCTCTGTAAGATGGTGAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCGTAAGAGCTCTCAAGAGCCACCAGTTGCCAACTGGCCTGGGGGCGTGTATAATCCATGGCCTTaGGGAGAGGGAATTGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EGRKSSQEPPVANWPGGVYNPWP*GEGIGK Trigger: CTTTCCAATTCCCTCTCCCCAAGGCCATGGATTATA...CACGCCCCCAGGCCAGTTGGCAACTGGTGGCTCTTGAGAGCTCTTACGCCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTCACCATCTTACAGAGGGGCTTTATAATCCATGGCCTTGGGGAGAGGGAAAAGAGACCAGGCATTaGAAGAGGGGTACCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LAHHLTEGLYNPWPWGEGKETRH*KRGTLP Trigger: GGGGAGGGTACCCCTCTTTCAATGCCTGGTCTCTTT...TCCCTCTCCCCAAGGCCATGGATTATAAAGCCCCTCTGTAAGATGGTGAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGCTCAGGTACAGTGTGTTCCCACAAGCACACAGGCTGGCAAGGCCTCCTGCATACAGTAGGAGGTaGAAGACCTCTGTTTGGACA | + |
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Preference number: 2 (lower is better) Translates to: CQLRYSVFPQAHRLARPPAYSRR*KTSVWT Trigger: TGTCCAAACAGAGGTCTTCCACCTCCTACTGTATGC...AGGAGGCCTTGCCAGCCTGTGTGCTTGTGGGAACACACTGTACCTGAGCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGAGCAAGGAGCATCTTACAGTACAGAAAGAGGGACTGCGAGGCTCCAGGTGTAAAAATAGAGGGTaGCCACATGGCACCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: LWSKEHLTVQKEGLRGSRCKNRG*PHGTMS Trigger: GCTCATGGTGCCATGTGGGCACCCTCTATTTTTACA...CCTGGAGCCTCGCAGTCCCTCTTTCTGTACTGTAAGATGCTCCTTGCTCCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACAAGCCTCTGTCTGCTCAGTTaGGCCAGGCCGCTGTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: IEHLYWYLSAQVQCVPTSLCLLS*ARPLFN Trigger: ATTAAACAGCGGCCTGGCTCAACTGAGCAGACAGAG...GCTTGTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACAAGCAAAGGCCTGAGACAGTaGTCAGGGTGTGCTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: IEHLYWYLSAQVQCVPTSKGLRQ*SGCASC Trigger: GCATGAAGCACACCCTGATCACTGTCTCAGGCCTTT...GCTTGTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGGAAGACCTCTGTTTGGACATAAAGAGACCAGGCATTGAAAGAGGGGTATGTAAAAATAGAGGGTaGCCACATGGCACCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: EVEDLCLDIKRPGIERGVCKNRG*PHGTMS Trigger: GCTCATGGTGCCATGTGGGCACCCTCTATTTTTACA...TACCCCTCTTTCAATGCCTGGTCTCTTTATGTCCAAACAGAGGTCTTCCACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACAAGCGGGCTTTATAATCCATaGCCTTGGGGAGAGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: IEHLYWYLSAQVQCVPTSGLYNP*PWGEGI Trigger: AATTCCCTCTCCCCAAGGCCATGGATTATAAAGCCC...GCTTGTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR GCA 72 bp | GGCAGGGTACACCGAAGCCTCGGCCCCAACACTGCCTaGCCACCCGCCAGAGAGGCTCCACCACTGCCGTCT | + |
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Preference number: 3 (lower is better) Translates to: GRVHRSLGPNTA*PPAREAPPLPS Trigger: AGACGGCAGTGGTGGAGCCTCTCTGGCGGGTGGGCAGGCAGTGTTGGGGCCGAGGCTTCGGTGTACCCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR CCA 72 bp | GGGCGTAAGAGCTCTCAAGAGCCACCAGTTGCCAACTaGCCTGGGGGCGTGAGGTGGGCCAGGGTCGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: GRKSSQEPPVAN*PGGVRWARVES Trigger: TGACTCGACCCTGGCCCACCTCACGCCCCCAGGCCAGTTGGCAACTGGTGGCTCTTGAGAGCTCTTACGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR CCA 72 bp | AGCTCAGGTACAGTGTGTTCCCACAAGCACACAGGCTaGCAAGGCCTCCTGGGCAAGGAGGCAGGCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SSGTVCSHKHTG*QGLLGKEAGPE Trigger: CTCTGGGCCTGCCTCCTTGCCCAGGAGGCCTTGCCAGCCTGTGTGCTTGTGGGAACACACTGTACCTGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR TCA 72 bp | CAGGGTCGAGTCAGTGCCCAGAAAGGCCTGAGACAGTaGTCAGGGTGTGCTTCATGCCCTCTTAGGGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: QGRVSAQKGLRQ*SGCASCPLRAP Trigger: AGGGGCCCTAAGAGGGCATGAAGCACACCCTGATCACTGTCTCAGGCCTTTCTGGGCACTGACTCGACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR CAA 90 bp | AGCACAGCCTCTGTCTGCTCAGTTGAGCCAGGCCGCTGTTTAATAGAGCAGCCACAGCCGTCGCTGTCTTaGGAGCAAGGAGCATCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: STASVCSVEPGRCLIEQPQPSLS*EQGASY Trigger: GTAAGATGCTCCTTGCTCCAAAGACAGCGACGGCTG...TGGCTGCTCTATTAAACAGCGGCCTGGCTCAACTGAGCAGACAGAGGCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR GCA 72 bp | GGTTTTGGTCACCGCTGGTCAAGCACAGCCTCTGTCTaGTCAGTTGAGCCAGGCCGCTGTTTAATAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GFGHRWSSTASV*SVEPGRCLIEQ Trigger: CTGCTCTATTAAACAGCGGCCTGGCTCAACTGAGCAGACAGAGGCTGTGCTTGACCAGCGGTGACCAAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR TCA 72 bp | GGAAGACCTCTGTTTGGACATAAAGAGACCAGGCATTaGAAGAGGGGTACCCTCCCCACCCTCCCTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: GRPLFGHKETRH*KRGTLPTLPSS Trigger: TGAAGAAGGGAGGGTGGGGAGGGTACCCCTCTTTCAATGCCTGGTCTCTTTATGTCCAAACAGAGGTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR CCA 72 bp | CACCATCTTACAGAGGGGCTTTATAATCCATGGCCTTaGGGAGAGGGAATTGGAAAGAGGGCAAGTAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: HHLTEGLYNPWP*GEGIGKRASRV Trigger: AACTCTACTTGCCCTCTTTCCAATTCCCTCTCCCCAAGGCCATGGATTATAAAGCCCCTCTGTAAGATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACCAGAGCCTGCGTTTCTaGGCACACACACACACACAA | + |
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Preference number: 3 (lower is better) Translates to: KNRASLLVPVSSGTVCSHQSLRF*AHTHTQ Trigger: TTGTGTGTGTGTGTGTGCCAAGAAACGCAGGCTCTG...GTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | GAGGCTCCAGGAGAGCCCCGCCCCTTCCTCCTTCAGGCATACAGTAGGAGGTGGCGATGGCATCCGCTGTaGGAGGCACGCCTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: EAPGEPRPFLLQAYSRRWRWHPL*EARLPL Trigger: CAGGGGCAGGCGTGCCTCTCACAGCGGATGCCATCG...CCACCTCCTACTGTATGCCTGAAGGAGGAAGGGGCGGGGCTCTCCTGGAGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | AACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCTCGGCCCGATGGCATCCGCTGTaGGAGGCACGCCTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NPHTTPKPRLAGYTEASARWHPL*EARLPL Trigger: CAGGGGCAGGCGTGCCTCTCACAGCGGATGCCATCG...GGCCGAGGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | AACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCTCGGCCCGCCAGACCGGAAGCTaGGACCTGGCAGGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: NPHTTPKPRLAGYTEASARQTGS*DLAGWG Trigger: ACCCCAGCCTGCCAGGTCCCAGCTTCCGGTCTGGCG...GGCCGAGGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | AACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCTCGGCCCAATCCTCCCGGGACTaGCGCAGCACCTGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NPHTTPKPRLAGYTEASAQSSRD*RSTCSS Trigger: GGAGCTGCAGGTGCTGCGCCAGTCCCGGGAGGATTG...GGCCGAGGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | AACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCTCGGCCCTGGGGTGGGCAGGGTaGTTTGGAGGCTCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NPHTTPKPRLAGYTEASALGWAG*FGGSLL Trigger: CAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAG...GGCCGAGGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR GCA 90 bp | AACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCTCGGCCGACTGGCGCAGCACCTaGAGCTCCCGCTTCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: NPHTTPKPRLAGYTEASADWRST*SSRFSS Trigger: AGAGGAGAAGCGGGAGCTGCAGGTGCTGCGCCAGTC...GGCCGAGGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR GCA 90 bp | AACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCTCGGCCAAGCTCTCGGCACCCTaGTCCATCTGCAGGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: NPHTTPKPRLAGYTEASAKLSAP*SICRRV Trigger: CACCCGCCTGCAGATGGAGCAGGGTGCCGAGAGCTT...GGCCGAGGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR GCA 90 bp | AACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCTCCAGCTGGCCAGGCTaGCGGGGTCACCGGTACCAA | + |
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Preference number: 4 (lower is better) Translates to: NSNPHTTPKPRLAGYTEASSWPG*RGHRYQ Trigger: TTGGTACCGGTGACCCCGGCAGCCTGGCCAGCTGGA...GGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | AACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCGGATGGACGGGGGAGTaGAACTCTGGAGGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: NSNPHTTPKPRLAGYTEAGWTGE*NSGGHR Trigger: CCTGTGGCCTCCAGAGTTTCACTCCCCCGTCCATCC...GGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | CATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGCACGCCTGCCCCTaGCTCCGGAACTCCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HRPRGTPRSQRAATGSQGRHACP*LRNSSH Trigger: GTGGCTGGAGTTCCGGAGTCAGGGGCAGGCGTGCCT...GCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | GTGCCCACATGGCACCATGAGCAGGACCAGCCCGTAGGAGACCGTTACATACATCGATGGCATCCGCTGTaGGAGGCACGCCTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VPTWHHEQDQPVGDRYIHRWHPL*EARLPL Trigger: CAGGGGCAGGCGTGCCTCTCACAGCGGATGCCATCG...ATGTATGTAACGGTCTCCTACGGGCTGGTCCTGCTCATGGTGCCATGTGGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGCGTAAGAGCTCTCAAGAGCCACCAGTTGCCAACTGGCCTGGGGGCGTGCTGATCAGACTGGGGTaGCTGACCACCTGGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: EGRKSSQEPPVANWPGGVLIRLG*LTTWSL Trigger: GAGGGACCAGGTGGTCAGGCACCCCAGTCTGATCAG...CACGCCCCCAGGCCAGTTGGCAACTGGTGGCTCTTGAGAGCTCTTACGCCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGCGTAAGAGCTCTCAAGAGCCACCAGTTGCCAACTGGCCTGGGGGCGTGCAGGGGACCCAGAACTaGCAGGGAGGCTACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: EGRKSSQEPPVANWPGGVQGTQN*QGGYLL Trigger: GAGAAGGTAGCCTCCCTGGCAGTTCTGGGTCCCCTG...CACGCCCCCAGGCCAGTTGGCAACTGGTGGCTCTTGAGAGCTCTTACGCCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | AGAGCAGCCATAAACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGGGATGGACGGGGGAGTaGAACTCTGGAGGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: RAAINSNPHTTPKPRLAGGWTGE*NSGGHR Trigger: CCTGTGGCCTCCAGAGTTTCACTCCCCCGTCCATCC...CCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTTTATGGCTGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | AACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCTCGGCCAGGAGGAGGAGGAACTaGAGTCGTCCTCTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: NPHTTPKPRLAGYTEASARRRRN*SRPLPA Trigger: AGCTGGAAGAGGACGACTCCAGTTCCTCCTCCTCCT...GGCCGAGGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | GAAGGGCGTAAGAGCTCTCAAGAGCCACCAGTTGCCAACTGGCCTGGGGGCGTGCGAGGTGGATGGGGCTaGAGGAAATTGGCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EGRKSSQEPPVANWPGGVRGGWG*RKLASS Trigger: GGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTCG...CACGCCCCCAGGCCAGTTGGCAACTGGTGGCTCTTGAGAGCTCTTACGCCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | AGAGCAGCCATAAACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGGTGGGCAGGGTGGTTTaGAGGCTCGCTGCTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RAAINSNPHTTPKPRLAGVGRVV*RLAAAR Trigger: TCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCAC...CCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTTTATGGCTGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCACCTGGCAGGCTGGGGTaGGCAGGGTGGTTTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRAPGRLG*AGWFGG Trigger: GCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGG...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | AACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCGGCTGTGAGTCCAGCTaGCCAGGCTGCCGGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: NPKITKSSNRVSGQEEGTGCESS*PGCRGH Trigger: GTGACCCCGGCAGCCTGGCCAGCTGGACTCACAGCC...GGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACGGCTGTGAGTCCAGCTaGCCAGGCTGCCGGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHGCESS*PGCRGH Trigger: GTGACCCCGGCAGCCTGGCCAGCTGGACTCACAGCC...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | TACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGAGGCACGCCTGCCCCTaGCTCCGGAACTCCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YIDLGEPQDHKEQQQGLRRHACP*LRNSSH Trigger: GTGGCTGGAGTTCCGGAGTCAGGGGCAGGCGTGCCT...CCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | AACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCCAGACGCCATCACAGTaGCAACCACAATCCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NSNPHTTPKPRLAGYTEAQTPSQ*QPQSSR Trigger: CCGGGAGGATTGTGGTTGTCACTGTGATGGCGTCTG...GGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAAAGAGGGACTGCGAGGCTCCAGGAGAGCCCCGCCCCTTCCTCCTTCAGGCAGGGGAAGGACGTGTaGTCCATCTGGCACTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: TERGTARLQESPAPSSFRQGKDV*SIWHLM Trigger: CATTAAGTGCCAGATGGATCACACGTCCTTCCCCTG...CCTGAAGGAGGAAGGGGCGGGGCTCTCCTGGAGCCTCGCAGTCCCTCTTTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACAGGCGGCAGGTGCTGTaGCGAGAAGCCATGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHRRQVL*REAMPR Trigger: CCTGGGCATGGCTTCTCGGCACAGCACCTGCCGCCT...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAAGGCGGCAGGTGCTGTaGCGAGAAGCCATGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNPKITKSSNRVSGQEERRQVL*REAMPR Trigger: CCTGGGCATGGCTTCTCGGCACAGCACCTGCCGCCT...TTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTCCAGCTGGCCAGGCTaGCGGGGTCACCGGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: NPKITKSSNRVSGQEEGTSSWPG*RGHRYQ Trigger: TTGGTACCGGTGACCCCGGCAGCCTGGCCAGCTGGA...GGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAATCCAGCTGGCCAGGCTaGCGGGGTCACCGGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGNPKITKSSNRVSGQEESSWPG*RGHRYQ Trigger: TTGGTACCGGTGACCCCGGCAGCCTGGCCAGCTGGA...TTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCACATGGCACCATGAGCAGGACCAGCCCGTAGGAGACCGTTACATACATGTGGGCAGGGTGGTTTaGAGGCTCGCTGCTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPTWHHEQDQPVGDRYIHVGRVV*RLAAAR Trigger: TCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCAC...ATGTATGTAACGGTCTCCTACGGGCTGGTCCTGCTCATGGTGCCATGTGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCACTGGGGTGGGCAGGGTaGTTTGGAGGCTCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRALGWAG*FGGSLL Trigger: CAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAG...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTACCTGGCAGGCTGGGGTaGGCAGGGTGGTTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKITKSSNRVSGQEEGTLPGRLG*AGWFGG Trigger: GCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGG...TAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | TACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGCCTGGCAGGCTGGGGTaGGCAGGGTGGTTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YIDLGEPQDHKEQQQGLRPGRLG*AGWFGG Trigger: GCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGG...CCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTACGCCAGACCGGAAGCTaGGACCTGGCAGGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKITKSSNRVSGQEEGTLRQTGS*DLAGWG Trigger: ACCCCAGCCTGCCAGGTCCCAGCTTCCGGTCTGGCG...TAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGATGGACGGGGGAGTaGAACTCTGGAGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRAGWTGE*NSGGHR Trigger: CCTGTGGCCTCCAGAGTTTCACTCCCCCGTCCATCC...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | CATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCTGTGCCGAGAAGCCATaGCCAGGGTACAGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRPRGTPRSQRAATGSQGCAEKP*PGYSHH Trigger: GTGGTGGCTGTACCCTGGGCATGGCTTCTCGGCACA...GCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGAGGCGGCAGGTGCTGTaGCGAGAAGCCATGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YIDLGEPQDHKEQQQGLRRRQVL*REAMPR Trigger: CCTGGGCATGGCTTCTCGGCACAGCACCTGCCGCCT...CCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGACTGGCGCAGCACCTaGAGCTCCCGCTTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRADWRST*SSRFSS Trigger: AGAGGAGAAGCGGGAGCTGCAGGTGCTGCGCCAGTC...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGACTGGCGCAGCACCTaGAGCTCCCGCTTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNPKITKSSNRVSGQEEDWRST*SSRFSS Trigger: AGAGGAGAAGCGGGAGCTGCAGGTGCTGCGCCAGTC...TTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACAAGCTCTCGGCACCCTaGTCCATCTGCAGGCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHKLSAP*SICRRV Trigger: CACCCGCCTGCAGATGGAGCAGGGTGCCGAGAGCTT...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | CTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAGGTTTGGAGGCTCGCTaGTGCCAGAGGACAAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGEPQDHKEQQQGLRAGRGLEAR*CQRTRS Trigger: CGACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACC...TCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCACATGGCACCATGAGCAGGACCAGCCCGTAGGAGACCGTTACATACATGGGGCTGGAGGAAATTaGCTTCCTCCAGGCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPTWHHEQDQPVGDRYIHGAGGN*LPPGGH Trigger: ATGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCC...ATGTATGTAACGGTCTCCTACGGGCTGGTCCTGCTCATGGTGCCATGTGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGACGCTGCCGAGGTGGATaGGGCTGGAGGAAATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGEPQDHKEQQQGLRAGRRCRGG*GWRKLA Trigger: AGCCAATTTCCTCCAGCCCCATCCACCTCGGCAGCG...TCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | TTGGACATAAAGAGACCAGGCATTGAAAGAGGGGTACCCTCCCCACCCTCCCTTCTGGGGTGGGCAGGGTaGTTTGGAGGCTCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDIKRPGIERGVPSPPSLLGWAG*FGGSLL Trigger: CAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAG...AAGGGAGGGTGGGGAGGGTACCCCTCTTTCAATGCCTGGTCTCTTTATGTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCACTGATCAGACTGGGGTaGCTGACCACCTGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRALIRLG*LTTWSL Trigger: GAGGGACCAGGTGGTCAGGCACCCCAGTCTGATCAG...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | CATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCCGGCCAAGCTGCAACTaGAGGTCTCAGGGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRPRGTPRSQRAATGSQGRPSCN*RSQGHR Trigger: TCTGTGACCCTGAGACCTGCAGTTGCAGCTTGGCCG...GCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGTGTCCCCCAGTTCACTaGTCACAGGGGGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GEPQDHKEQQQGLRAGRRCPPVH*SQGAWK Trigger: CTTCCAAGCCCCCTGTGAGCAGTGAACTGGGGGACA...CCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGTTTGGAGGCTCGCTaGTGCCAGAGGACAAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGNPKITKSSNRVSGQEEGLEAR*CQRTRS Trigger: CGACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACC...TTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAGCTCAGGTACAGTGTGTTCCCACAAGCACACAGGCTGGCAAGGCCTCCTACTCCAGGAAGCAAGTaGTCGCATCCCGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CQLRYSVFPQAHRLARPPTPGSK*SHPVVE Trigger: CTCCACCACGGGATGCGAGCACTTGCTTCCTGGAGT...AGGAGGCCTTGCCAGCCTGTGTGCTTGTGGGAACACACTGTACCTGAGCTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCACATGGCACCATGAGCAGGACCAGCCCGTAGGAGACCGTTACATACATGGGTGCCTGACCACCTaGTCCCTCCTCATCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VPTWHHEQDQPVGDRYIHGCLTT*SLLIRV Trigger: AACTCTGATGAGGAGGGACCAGGTGGTCAGGCACCC...ATGTATGTAACGGTCTCCTACGGGCTGGTCCTGCTCATGGTGCCATGTGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGGGCTGGAGGAAATTaGCTTCCTCCAGGCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRAGAGGN*LPPGGH Trigger: ATGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCC...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAACGCTGCCGAGGTGGATaGGGCTGGAGGAAATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNPKITKSSNRVSGQEERCRGG*GWRKLA Trigger: AGCCAATTTCCTCCAGCCCCATCCACCTCGGCAGCG...TTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTAGTGGGCAGGGTGGTTTaGAGGCTCGCTGCTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKITKSSNRVSGQEEGTLVGRVV*RLAAAR Trigger: TCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCAC...TAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGCCATAAACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGGTGGTGGAGAGAAGCTaGGCAATGGGTGGAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAAINSNPHTTPKPRLAGVVERS*AMGGRS Trigger: AGACCTTCCACCCATTGCCCAGCTTCTCTCCACCAC...CCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTTTATGGCTGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCGCTCGCATCCCGTGGTaGAGAGAAGCTGGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: NPKITKSSNRVSGQEEGTARIPW*REAGQW Trigger: CCATTGCCCAGCTTCTCTCCACCACGGGATGCGAGC...GGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCACATGGCACCATGAGCAGGACCAGCCCGTAGGAGACCGTTACATACATGCAGCATCCTCAAACTaGCTCTCCAGAAGGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPTWHHEQDQPVGDRYIHAASSN*LSRRGA Trigger: GGCACCCCTTCTGGAGAGCCAGTTTGAGGATGCTGC...ATGTATGTAACGGTCTCCTACGGGCTGGTCCTGCTCATGGTGCCATGTGGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCACAGACGCCATCACAGTaGCAACCACAATCCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRAQTPSQ*QPQSSR Trigger: CCGGGAGGATTGTGGTTGTCACTGTGATGGCGTCTG...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | AAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTAATCGAGCCAGACTGGCTGTaGGTCCAGCTGGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KITKSSNRVSGQEEGTLIEPDWL*VQLARL Trigger: CAGCCTGGCCAGCTGGACTCACAGCCAGTCTGGCTC...GATTAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | ACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGAGCCAGACTGGCTGTaGGTCCAGCTGGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVTYIDLGEPQDHKEQQQEPDWL*VQLARL Trigger: CAGCCTGGCCAGCTGGACTCACAGCCAGTCTGGCTC...CTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCACAGGAGGATAAGCTaGGGTCCCAGGAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHHRRIS*GPRSCS Trigger: AGAGCAGCTCCTGGGACCTCAGCTTATCCTCCTGTG...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TTGGACATAAAGAGACCAGGCATTGAAAGAGGGGTACCCTCCCCACCCTCCCTTTGTGCCGAGAAGCCATaGCCAGGGTACAGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDIKRPGIERGVPSPPSLCAEKP*PGYSHH Trigger: GTGGTGGCTGTACCCTGGGCATGGCTTCTCGGCACA...AAGGGAGGGTGGGGAGGGTACCCCTCTTTCAATGCCTGGTCTCTTTATGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCCGGCCAAGCTGCAACTaGAGGTCTCAGGGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPKITKSSNRVSGQEEGTRPSCN*RSQGHR Trigger: TCTGTGACCCTGAGACCTGCAGTTGCAGCTTGGCCG...GGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACTGTCCCCCAGTTCACTaGTCACAGGGGGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHCPPVH*SQGAWK Trigger: CTTCCAAGCCCCCTGTGAGCAGTGAACTGGGGGACA...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAATGTCCCCCAGTTCACTaGTCACAGGGGGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGNPKITKSSNRVSGQEECPPVH*SQGAWK Trigger: CTTCCAAGCCCCCTGTGAGCAGTGAACTGGGGGACA...TTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | CATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCTATCGCTGCTGCAACTaGTGTCCCCCAGTTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRPRGTPRSQRAATGSQGYRCCN*CPPVHC Trigger: GCAGTGAACTGGGGGACAGCAGTTGCAGCAGCGATA...GCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TTGGACATAAAGAGACCAGGCATTGAAAGAGGGGTACCCTCCCCACCCTCCCTTCAGGGGACCCAGAACTaGCAGGGAGGCTACCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LDIKRPGIERGVPSPPSLQGTQN*QGGYLL Trigger: GAGAAGGTAGCCTCCCTGGCAGTTCTGGGTCCCCTG...AAGGGAGGGTGGGGAGGGTACCCCTCTTTCAATGCCTGGTCTCTTTATGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | TACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGCAGGGGACCCAGAACTaGCAGGGAGGCTACCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YIDLGEPQDHKEQQQGLRQGTQN*QGGYLL Trigger: GAGAAGGTAGCCTCCCTGGCAGTTCTGGGTCCCCTG...CCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGGTGCCTGACCACCTaGTCCCTCCTCATCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRAGCLTT*SLLIRV Trigger: AACTCTGATGAGGAGGGACCAGGTGGTCAGGCACCC...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | AAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTAATCCAATCCTCCCGGGACTaGCGCAGCACCTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KITKSSNRVSGQEEGTLIQSSRD*RSTCSS Trigger: GGAGCTGCAGGTGCTGCGCCAGTCCCGGGAGGATTG...GATTAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | ACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGCAATCCTCCCGGGACTaGCGCAGCACCTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVTYIDLGEPQDHKEQQQQSSRD*RSTCSS Trigger: GGAGCTGCAGGTGCTGCGCCAGTCCCGGGAGGATTG...CTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| 3UTR CAA 72 bp | AAGCCCCTAAGGCCCTGCGCTCAGCCGTCGCTGTCTTaGGAGCAAGGAGCATCTTACAGTACAGAAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLRPCAQPSLS*EQGASYSTERG Trigger: CCCTCTTTCTGTACTGTAAGATGCTCCTTGCTCCAAAGACAGCGACGGCTGAGCGCAGGGCCTTAGGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCCACATGGCACCATGAGCAGGACCAGCCCGTAGGAGACCGTTACATACATATTTGCCACGGCCACTaGCAAGTCCTCCTCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPTWHHEQDQPVGDRYIHICHGH*QVLLYR Trigger: TCTGTAGAGGAGGACTTGGCAGTGGCCGTGGCAAAT...ATGTATGTAACGGTCTCCTACGGGCTGGTCCTGCTCATGGTGCCATGTGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGGAGCAAGGAGCATCTTACAGTACAGAAAGAGGGACTGCGAGGCTCCAGGCGGCCAAGCTGCAACTaGAGGTCTCAGGGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWSKEHLTVQKEGLRGSRRPSCN*RSQGHR Trigger: TCTGTGACCCTGAGACCTGCAGTTGCAGCTTGGCCG...CCTGGAGCCTCGCAGTCCCTCTTTCTGTACTGTAAGATGCTCCTTGCTCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | AAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTAATCAAGCTCTCGGCACCCTaGTCCATCTGCAGGCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KITKSSNRVSGQEEGTLIKLSAP*SICRRV Trigger: CACCCGCCTGCAGATGGAGCAGGGTGCCGAGAGCTT...GATTAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACTATCGCTGCTGCAACTaGTGTCCCCCAGTTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHYRCCN*CPPVHC Trigger: GCAGTGAACTGGGGGACAGCAGTTGCAGCAGCGATA...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | CCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTAACTCCAGGAAGCAAGTaGTCGCATCCCGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PKITKSSNRVSGQEEGTLTPGSK*SHPVVE Trigger: CTCCACCACGGGATGCGAGCACTTGCTTCCTGGAGT...TAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | AACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCTCGTCCTCTTCCAGCTaGTCAAACTTCCTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSNPHTTPKPRLAGYTEASSSSS*SNFLFS Trigger: ACTGAAGAGGAAGTTTGACCAGCTGGAAGAGGACGA...GGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACAGGAGGAGGAGGAACTaGAGTCGTCCTCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHRRRRN*SRPLPA Trigger: AGCTGGAAGAGGACGACTCCAGTTCCTCCTCCTCCT...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGCCATAAACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGCAGAGGACAAGGTCGTaGAAGAGTCTGTCATATCGC | + |
|
Preference number: 4 (lower is better) Translates to: RAAINSNPHTTPKPRLAGQRTRS*KSLSYR Trigger: GCGATATGACAGACTCTTCCACGACCTTGTCCTCTG...CCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTTTATGGCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACAAGCGGCTGTGAGTCCAGCTaGCCAGGCTGCCGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IEHLYWYLSAQVQCVPTSGCESS*PGCRGH Trigger: GTGACCCCGGCAGCCTGGCCAGCTGGACTCACAGCC...GCTTGTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCACATGGCACCATGAGCAGGACCAGCCCGTAGGAGACCGTTACATACATAAGCTGGGCAATGGGTaGAAGGTCTCAAGGCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: VPTWHHEQDQPVGDRYIHKLGNG*KVSRLS Trigger: GGATAGCCTTGAGACCTTCCACCCATTGCCCAGCTT...ATGTATGTAACGGTCTCCTACGGGCTGGTCCTGCTCATGGTGCCATGTGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGAAGCTGGGCAATGGGTaGAAGGTCTCAAGGCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GEPQDHKEQQQGLRAGRRKLGNG*KVSRLS Trigger: GGATAGCCTTGAGACCTTCCACCCATTGCCCAGCTT...CCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTAGCAGCATCCTCAAACTaGCTCTCCAGAAGGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PKITKSSNRVSGQEEGTLAASSN*LSRRGA Trigger: GGCACCCCTTCTGGAGAGCCAGTTTGAGGATGCTGC...TAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | AACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCCAGGGGAAGGACGTGTaGTCCATCTGGCACTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: NPKITKSSNRVSGQEEGTQGKDV*SIWHLM Trigger: CATTAAGTGCCAGATGGATCACACGTCCTTCCCCTG...GGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCACAGGGGAAGGACGTGTaGTCCATCTGGCACTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRAQGKDV*SIWHLM Trigger: CATTAAGTGCCAGATGGATCACACGTCCTTCCCCTG...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | AACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCCCAGATGGAAGCAGCTaGGGTTATCCAAGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPKITKSSNRVSGQEEGTPDGSS*GYPSCP Trigger: TGGGCAACTTGGATAACCTCAGCTGCTTCCATCTGG...GGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | ATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAATTTGCCACGGCCACTaGCAAGTCCTCCTCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IDLGEPQDHKEQQQGLRAICHGH*QVLLYR Trigger: TCTGTAGAGGAGGACTTGGCAGTGGCCGTGGCAAAT...TGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACATTTGCCACGGCCACTaGCAAGTCCTCCTCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHICHGH*QVLLYR Trigger: TCTGTAGAGGAGGACTTGGCAGTGGCCGTGGCAAAT...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | CCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTATATCGCTGCTGCAACTaGTGTCCCCCAGTTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PKITKSSNRVSGQEEGTLYRCCN*CPPVHC Trigger: GCAGTGAACTGGGGGACAGCAGTTGCAGCAGCGATA...TAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGGTTTGGAGGCTCGCTaGTGCCAGAGGACAAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VGDRYIHRPRGTPRSQRAGLEAR*CQRTRS Trigger: CGACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACC...TGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGTCTCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | CATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCCAGAGGACAAGGTCGTaGAAGAGTCTGTCATATCGC | + |
|
Preference number: 4 (lower is better) Translates to: HRPRGTPRSQRAATGSQGQRTRS*KSLSYR Trigger: GCGATATGACAGACTCTTCCACGACCTTGTCCTCTG...GCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCCACATGGCACCATGAGCAGGACCAGCCCGTAGGAGACCGTTACATACATTGTTCAGGAAGCAACTaGCGTCCAGGTTGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPTWHHEQDQPVGDRYIHCSGSN*RPGWHS Trigger: AGAATGCCAACCTGGACGCCAGTTGCTTCCTGAACA...ATGTATGTAACGGTCTCCTACGGGCTGGTCCTGCTCATGGTGCCATGTGGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGATCCCAGACTATAATCTaGCAGAGCCTGGAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGEPQDHKEQQQGLRAGRSQTII*QSLEKL Trigger: GAGCTTCTCCAGGCTCTGCCAGATTATAGTCTGGGA...TCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTAGTGGTGGAGAGAAGCTaGGCAATGGGTGGAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKITKSSNRVSGQEEGTLVVERS*AMGGRS Trigger: AGACCTTCCACCCATTGCCCAGCTTCTCTCCACCAC...TAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGAGACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCTCGCATCCCGTGGTaGAGAGAAGCTGGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VGDRYIHRPRGTPRSQRAARIPW*REAGQW Trigger: CCATTGCCCAGCTTCTCTCCACCACGGGATGCGAGC...TGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGTCTCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCCACATGGCACCATGAGCAGGACCAGCCCGTAGGAGACCGTTACATACATCGAGGTCAGAGTCACTaGAATTCAGGATCTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPTWHHEQDQPVGDRYIHRGQSH*NSGSVP Trigger: TGGAACAGATCCTGAATTTCAGTGACTCTGACCTCG...ATGTATGTAACGGTCTCCTACGGGCTGGTCCTGCTCATGGTGCCATGTGGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | CATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCCGAGGTCAGAGTCACTaGAATTCAGGATCTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRPRGTPRSQRAATGSQGRGQSH*NSGSVP Trigger: TGGAACAGATCCTGAATTTCAGTGACTCTGACCTCG...GCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | TACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGCCAGATGGAAGCAGCTaGGGTTATCCAAGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YIDLGEPQDHKEQQQGLRPDGSS*GYPSCP Trigger: TGGGCAACTTGGATAACCTCAGCTGCTTCCATCTGG...CCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR TCA 90 bp | TACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCACAGGAGGATAAGCTaGGGTCCCAGGAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YIHRPRGTPRSQRAATGSHRRIS*GPRSCS Trigger: AGAGCAGCTCCTGGGACCTCAGCTTATCCTCCTGTG...AGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR GCA 90 bp | ACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGACTCCAGGAAGCAAGTaGTCGCATCCCGTGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVTYIDLGEPQDHKEQQQTPGSK*SHPVVE Trigger: CTCCACCACGGGATGCGAGCACTTGCTTCCTGGAGT...CTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGTCGTCCTCTTCCAGCTaGTCAAACTTCCTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEPQDHKEQQQGLRAGRRSSSSS*SNFLFS Trigger: ACTGAAGAGGAAGTTTGACCAGCTGGAAGAGGACGA...CCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | ACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGGTGCCTGACCACCTaGTCCCTCCTCATCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVTYIDLGEPQDHKEQQQGCLTT*SLLIRV Trigger: AACTCTGATGAGGAGGGACCAGGTGGTCAGGCACCC...CTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | AAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTAATCCGAGGTGGATGGGGCTaGAGGAAATTGGCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KITKSSNRVSGQEEGTLIRGGWG*RKLASS Trigger: GGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTCG...GATTAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCAGAGGACAAGGTCGTaGAAGAGTCTGTCATATCGC | + |
|
Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHQRTRS*KSLSYR Trigger: GCGATATGACAGACTCTTCCACGACCTTGTCCTCTG...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | AACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCAACTGGCGTCCAGGTTaGCATTCTCATCTAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NPKITKSSNRVSGQEEGTNWRPG*HSHLGC Trigger: GCATCCTAGATGAGAATGCCAACCTGGACGCCAGTT...GGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACTGTTCAGGAAGCAACTaGCGTCCAGGTTGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHCSGSN*RPGWHS Trigger: AGAATGCCAACCTGGACGCCAGTTGCTTCCTGAACA...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | CTTTGGAGCAAGGAGCATCTTACAGTACAGAAAGAGGGACTGCGAGGCTCCAGGAAGCTGGGCAATGGGTaGAAGGTCTCAAGGCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LWSKEHLTVQKEGLRGSRKLGNG*KVSRLS Trigger: GGATAGCCTTGAGACCTTCCACCCATTGCCCAGCTT...CCTGGAGCCTCGCAGTCCCTCTTTCTGTACTGTAAGATGCTCCTTGCTCCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | ACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGCAGCATCCTCAAACTaGCTCTCCAGAAGGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVTYIDLGEPQDHKEQQQAASSN*LSRRGA Trigger: GGCACCCCTTCTGGAGAGCCAGTTTGAGGATGCTGC...CTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| 3UTR CAA 72 bp | AGGGGCTTTATAATCCATGGCCTTGGGGAGAGGGAATaGGAAAGAGGGCAAGTAGAGTTTCTGGGAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGFIIHGLGERE*ERGQVEFLGRG Trigger: CCCCCTTCCCAGAAACTCTACTTGCCCTCTTTCCAATTCCCTCTCCCCAAGGCCATGGATTATAAAGCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | AGCACAGCCTCTGTCTGCTCAGTTGAGCCAGGCCGCTGTTTAATAGAGCAGCCAAAGATGTCAGCCAGATaGAAGCAGCTGAGGTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: STASVCSVEPGRCLIEQPKMSAR*KQLRLS Trigger: GGATAACCTCAGCTGCTTCCATCTGGCTGACATCTT...TGGCTGCTCTATTAAACAGCGGCCTGGCTCAACTGAGCAGACAGAGGCTGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | TACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGAACTGGCGTCCAGGTTaGCATTCTCATCTAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YIDLGEPQDHKEQQQGLRNWRPG*HSHLGC Trigger: GCATCCTAGATGAGAATGCCAACCTGGACGCCAGTT...CCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | TTGGACATAAAGAGACCAGGCATTGAAAGAGGGGTACCCTCCCCACCCTCCCTTAACTGGCGTCCAGGTTaGCATTCTCATCTAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LDIKRPGIERGVPSPPSLNWRPG*HSHLGC Trigger: GCATCCTAGATGAGAATGCCAACCTGGACGCCAGTT...AAGGGAGGGTGGGGAGGGTACCCCTCTTTCAATGCCTGGTCTCTTTATGTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | TACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGTGTTCAGGAAGCAACTaGCGTCCAGGTTGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YIDLGEPQDHKEQQQGLRCSGSN*RPGWHS Trigger: AGAATGCCAACCTGGACGCCAGTTGCTTCCTGAACA...CCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | ACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGTGGTGGAGAGAAGCTaGGCAATGGGTGGAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVTYIDLGEPQDHKEQQQVVERS*AMGGRS Trigger: AGACCTTCCACCCATTGCCCAGCTTCTCTCCACCAC...CTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | ATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACAAGCCAGACGCCATCACAGTaGCAACCACAATCCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IEHLYWYLSAQVQCVPTSQTPSQ*QPQSSR Trigger: CCGGGAGGATTGTGGTTGTCACTGTGATGGCGTCTG...GCTTGTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | ATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACAAGCCGAGGTGGATGGGGCTaGAGGAAATTGGCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IEHLYWYLSAQVQCVPTSRGGWG*RKLASS Trigger: GGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTCG...GCTTGTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | TACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGAAGATGTCAGCCAGATaGAAGCAGCTGAGGTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: YIDLGEPQDHKEQQQGLRKMSAR*KQLRLS Trigger: GGATAACCTCAGCTGCTTCCATCTGGCTGACATCTT...CCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | AAAAATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACGGGGCTGGAGGAAATTaGCTTCCTCCAGGCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNRASLLVPVSSGTVCSHGAGGN*LPPGGH Trigger: ATGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCC...GTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | GTAGGAGACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCATCCCAGACTATAATCTaGCAGAGCCTGGAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGDRYIHRPRGTPRSQRASQTII*QSLEKL Trigger: GAGCTTCTCCAGGCTCTGCCAGATTATAGTCTGGGA...TGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGTCTCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | GTAGGAGACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCACGAGGTCAGAGTCACTaGAATTCAGGATCTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGDRYIHRPRGTPRSQRARGQSH*NSGSVP Trigger: TGGAACAGATCCTGAATTTCAGTGACTCTGACCTCG...TGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGTCTCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | ATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACAAGCCCAGATGGAAGCAGCTaGGGTTATCCAAGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IEHLYWYLSAQVQCVPTSPDGSS*GYPSCP Trigger: TGGGCAACTTGGATAACCTCAGCTGCTTCCATCTGG...GCTTGTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR TCA 90 bp | AAAAATAGAGCATCTTTATTGGTACCTGTCAGCTCAGGTACAGTGTGTTCCCACCACAGGAGGATAAGCTaGGGTCCCAGGAGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNRASLLVPVSSGTVCSHHRRIS*GPRSCS Trigger: AGAGCAGCTCCTGGGACCTCAGCTTATCCTCCTGTG...GTGGGAACACACTGTACCTGAGCTGACAGGTACCAATAAAGATGCTCTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | TACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTTCGTCCTCTTCCAGCTaGTCAAACTTCCTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIHRPRGTPRSQRAATGSSSSSS*SNFLFS Trigger: ACTGAAGAGGAAGTTTGACCAGCTGGAAGAGGACGA...AGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGGAAGACCTCTGTTTGGACATAAAGAGACCAGGCATTGAAAGAGGGGTATCCCAGACTATAATCTaGCAGAGCCTGGAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVEDLCLDIKRPGIERGVSQTII*QSLEKL Trigger: GAGCTTCTCCAGGCTCTGCCAGATTATAGTCTGGGA...TACCCCTCTTTCAATGCCTGGTCTCTTTATGTCCAAACAGAGGTCTTCCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR GCA 90 bp | TACAGATATAAATTACATCTTCACAGTCCAGAAGACCTAGCTCCTATGGTTCACCTGATCAGACTGGGGTaGCTGACCACCTGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRYKLHLHSPEDLAPMVHLIRLG*LTTWSL Trigger: GAGGGACCAGGTGGTCAGGCACCCCAGTCTGATCAG...GTGAACCATAGGAGCTAGGTCTTCTGGACTGTGAAGATGTAATTTATATCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGGAAGACCTCTGTTTGGACATAAAGAGACCAGGCATTGAAAGAGGGGTAAAGATGTCAGCCAGATaGAAGCAGCTGAGGTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: EVEDLCLDIKRPGIERGVKMSAR*KQLRLS Trigger: GGATAACCTCAGCTGCTTCCATCTGGCTGACATCTT...TACCCCTCTTTCAATGCCTGGTCTCTTTATGTCCAAACAGAGGTCTTCCACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CCA 90 bp | TACAGATATAAATTACATCTTCACAGTCCAGAAGACCTAGCTCCTATGGTTCACGCTCGCATCCCGTGGTaGAGAGAAGCTGGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: YRYKLHLHSPEDLAPMVHARIPW*REAGQW Trigger: CCATTGCCCAGCTTCTCTCCACCACGGGATGCGAGC...GTGAACCATAGGAGCTAGGTCTTCTGGACTGTGAAGATGTAATTTATATCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS CCA 90 bp | GGCTGTCTTCATCTACGCCAGACCGGAAGCTGGGACCTGGCAGGCTaGGGTGGGCAGGGTGGTTTGGAGGCTCGCTGCTGCCAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GCLHLRQTGSWDLAG*GGQGGLEARCCQRT Trigger: TGTCCTCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGGTCCCAGCTTCCGGTCTGGCGTAGATGAAGACAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 90 bp | CTGTTCCAGGCTGTCTTCATCTACGCCAGACCGGAAGCTGGGACCTaGCAGGCTGGGGTGGGCAGGGTGGTTTGGAGGCTCGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFQAVFIYARPEAGT*QAGVGRVVWRLAAA Trigger: GGCAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGGTCCCAGCTTCCGGTCTGGCGTAGATGAAGACAGCCTGGAACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS TCA 90 bp | GACCTGGACGCTCCCGAGGAGCCCGCTTCAGGATGGACGGGGGAGTaGAACTCTGGAGGCCACAGGAGTCCTGATCAGACTGGGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DLDAPEEPASGWTGE*NSGGHRSPDQTGVP Trigger: AGGCACCCCAGTCTGATCAGGACTCCTGTGGCCTCCAGAGTTTCACTCCCCCGTCCATCCTGAAGCGGGCTCCTCGGGAGCGTCCAGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000035101.9 ENSMUST00000213936.2 ENSMUST00000214058.2 ENSMUST00000215916.2 ENSMUST00000216929.2 |
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| CDS CCA 90 bp | GAAGGAGAGCCCGTCGCTGCCGAGGTGGATGGGGCTGGAGGAAATTaGCTTCCTCCAGGCGGCCATTTGCCACGGCCACTGCCAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EGEPVAAEVDGAGGN*LPPGGHLPRPLPSP Trigger: AGGACTTGGCAGTGGCCGTGGCAAATGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTCGGCAGCGACGGGCTCTCCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 90 bp | AGACCGGAAGCTGGGACCTGGCAGGCTGGGGTGGGCAGGGTGGTTTaGAGGCTCGCTGCTGCCAGAGGACAAGGTCGTGGAAGAGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPEAGTWQAGVGRVV*RLAAARGQGRGRVC Trigger: ACAGACTCTTCCACGACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGGTCCCAGCTTCCGGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 90 bp | TCTTCATCTACGCCAGACCGGAAGCTGGGACCTGGCAGGCTGGGGTaGGCAGGGTGGTTTGGAGGCTCGCTGCTGCCAGAGGACAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSTPDRKLGPGRLG*AGWFGGSLLPEDKV Trigger: GACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGGTCCCAGCTTCCGGTCTGGCGTAGATGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CAA 90 bp | AACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGTACACCGAAGCCGGTGGGCAGGGTGGTTaGGAGGCTCGCTGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSNPHTTPKPRLAGYTEAGGQGG*EARCCQ Trigger: CTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACC...GGCTTCGGTGTACCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS GCA 90 bp | TGGGACCTGGCAGGCTGGGGTGGGCAGGGTGGTTTGGAGGCTCGCTaGTGCCAGAGGACAAGGTCGTGGAAGAGTCTGTCATATCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WDLAGWGGQGGLEAR*CQRTRSWKSLSYRC Trigger: GCAGCGATATGACAGACTCTTCCACGACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGGTCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 90 bp | CTGGAGGCCACAGGAGTCCTGATCAGACTGGGGTGCCTGACCACCTaGTCCCTCCTCATCAGAGTTCCAGGCAGGGGAGGCAGAAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEATGVLIRLGCLTT*SLLIRVPGRGGRRG Trigger: GCCTCTTCTGCCTCCCCTGCCTGGAACTCTGATGAGGAGGGACCAGGTGGTCAGGCACCCCAGTCTGATCAGGACTCCTGTGGCCTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035101.9 ENSMUST00000213936.2 ENSMUST00000214058.2 ENSMUST00000215916.2 ENSMUST00000216929.2 |
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| CDS CCA 90 bp | TCAGGATCTGTTCCAGGCTGTCTTCATCTACGCCAGACCGGAAGCTaGGACCTGGCAGGCTGGGGTGGGCAGGGTGGTTTGGAGGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SGSVPGCLHLRQTGS*DLAGWGGQGGLEAR Trigger: GCGAGCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGGTCCCAGCTTCCGGTCTGGCGTAGATGAAGACAGCCTGGAACAGATCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS TCA 90 bp | GCCAAGCTGCAACTGCAGGTCTCAGGGTCACAGACGCCATCACAGTaGCAACCACAATCCTCCCGGGACTGGCGCAGCACCTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AKLQLQVSGSQTPSQ*QPQSSRDWRSTCSS Trigger: GGAGCTGCAGGTGCTGCGCCAGTCCCGGGAGGATTGTGGTTGTCACTGTGATGGCGTCTGTGACCCTGAGACCTGCAGTTGCAGCTTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 90 bp | CTGGCCAGGCTGCCGGGGTCACCGGTACCAAAGATGTCAGCCAGATaGAAGCAGCTGAGGTTATCCAAGTTGCCCACACCCCCTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LARLPGSPVPKMSAR*KQLRLSKLPTPPPS Trigger: GGAGGGAGGGGGTGTGGGCAACTTGGATAACCTCAGCTGCTTCCATCTGGCTGACATCTTTGGTACCGGTGACCCCGGCAGCCTGGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 90 bp | TCAAAGGAGTCACAGGAGGATAAGCTGAGGTCCCAGGAGCTGCTCTaGACGGCGTCCCCCTCAGGGGACCCAGAACTGCCAGGGAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SKESQEDKLRSQELL*TASPSGDPELPGRL Trigger: TAGCCTCCCTGGCAGTTCTGGGTCCCCTGAGGGGGACGCCGTCCAGAGCAGCTCCTGGGACCTCAGCTTATCCTCCTGTGACTCCTTTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CAA 90 bp | GGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGGGTGGGCAGGGTGGTTaGGAGGCTCGCTGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEPQDHKEQQQGLRAGRRGGQGG*EARCCQ Trigger: CTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACC...CCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS GCA 90 bp | GGGAGTGAAACTCTGGAGGCCACAGGAGTCCTGATCAGACTGGGGTaGCTGACCACCTGGTCCCTCCTCATCAGAGTTCCAGGCAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSETLEATGVLIRLG*LTTWSLLIRVPGRG Trigger: TCCCCTGCCTGGAACTCTGATGAGGAGGGACCAGGTGGTCAGGCACCCCAGTCTGATCAGGACTCCTGTGGCCTCCAGAGTTTCACTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035101.9 ENSMUST00000213936.2 ENSMUST00000214058.2 ENSMUST00000215916.2 ENSMUST00000216929.2 |
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| CDS CCA 90 bp | CCGTGGGAAATAGTAGACGGTGATGCCGTTAAAGGCCACGTGACCTaGACGCTCCCGAGGAGCCCGCTTCAGGATGGACGGGGGAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PWEIVDGDAVKGHVT*TLPRSPLQDGRGSE Trigger: TTCACTCCCCCGTCCATCCTGAAGCGGGCTCCTCGGGAGCGTCCAGGTCACGTGGCCTTTAACGGCATCACCGTCTACTATTTCCCACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035101.9 ENSMUST00000213936.2 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 90 bp | AAGCAAGTGCTCGCATCCCGTGGTGGAGAGAAGCTGGGCAATGGGTaGAAGGTCTCAAGGCTATCCGGGCTGCCCGACACCCTTCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KQVLASRGGEKLGNG*KVSRLSGLPDTLRE Trigger: TTCCCGAAGGGTGTCGGGCAGCCCGGATAGCCTTGAGACCTTCCACCCATTGCCCAGCTTCTCTCCACCACGGGATGCGAGCACTTGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 90 bp | CAGGCCCACGAGAGACTCCAGGAAGCAAGTGCTCGCATCCCGTGGTaGAGAGAAGCTGGGCAATGGGTGGAAGGTCTCAAGGCTATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QAHERLQEASARIPW*REAGQWVEGLKAIR Trigger: CCGGATAGCCTTGAGACCTTCCACCCATTGCCCAGCTTCTCTCCACCACGGGATGCGAGCACTTGCTTCCTGGAGTCTCTCGTGGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CAA 90 bp | CTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGACCTCCAGGCGGCCATTaGCCACGGCCACTGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGEPQDHKEQQQGLRAGRPPGGH*PRPLPS Trigger: ACTTGGCAGTGGCCGTGGCAAATGGCCGCCTGGAGG...TCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS-3UTR CAA 90 bp | AGAGCAGCCATAAACTCGAACCCACACACCACACCGAAGCCCAGACTGGCAGGGCTGCTCACAGGGGGCTaGGAAGGCGGAAAGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RAAINSNPHTTPKPRLAGLLTGG*EGGKGE Trigger: TTCCCCCTTTCCGCCTTCCAAGCCCCCTGTGAGCAG...CCCTGCCAGTCTGGGCTTCGGTGTGGTGTGTGGGTTCGAGTTTATGGCTGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS TCA 90 bp | TGCCGGGGTCACCGGTACCAAAGATGTCAGCCAGATGGAAGCAGCTaGGGTTATCCAAGTTGCCCACACCCCCTCCCTCCTCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CRGHRYQRCQPDGSS*GYPSCPHPLPPPPP Trigger: AGGAGGAGGAGGAGGGAGGGGGTGTGGGCAACTTGGATAACCTCAGCTGCTTCCATCTGGCTGACATCTTTGGTACCGGTGACCCCGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 90 bp | TGCTCCTGTGTAAACTCAGCTAAGGAGAAAAGGCGGCAGGTGCTGTaGCGAGAAGCCATGCCCAGGGTACAGCCACCACGGCTGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: CSCVNSAKEKRRQVL*REAMPRVQPPRLGT Trigger: TGTGCCCAGCCGTGGTGGCTGTACCCTGGGCATGGCTTCTCGGCACAGCACCTGCCGCCTTTTCTCCTTAGCTGAGTTTACACAGGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 90 bp | TCCTCCTTTAAACGGCGGCGGAGCTTCTCACGCCGAGCCCGGACCTaGTCCTGTGTAAACTCAGCTAAGGAGAAAAGGCGGCAGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSFKRRRSFSRRART*SCVNSAKEKRRQVL Trigger: CAGCACCTGCCGCCTTTTCTCCTTAGCTGAGTTTACACAGGAGCAGGTCCGGGCTCGGCGTGAGAAGCTCCGCCGCCGTTTAAAGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 90 bp | CTGGAGGAAATTGGCTTCCTCCAGGCGGCCATTTGCCACGGCCACTaGCAAGTCCTCCTCTACAGAGGCGTCATCGATGGCATCCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LEEIGFLQAAICHGH*QVLLYRGVIDGIRC Trigger: ACAGCGGATGCCATCGATGACGCCTCTGTAGAGGAGGACTTGGCAGTGGCCGTGGCAAATGGCCGCCTGGAGGAAGCCAATTTCCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 90 bp | AGGTGGATGGGGCTGGAGGAAATTGGCTTCCTCCAGGCGGCCATTTaGCACGGCCACTGCCAAGTCCTCCTCTACAGAGGCGTCATCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RWMGLEEIGFLQAAI*HGHCQVLLYRGVID Trigger: ATCGATGACGCCTCTGTAGAGGAGGACTTGGCAGTGGCCGTGGCAAATGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCCATCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 90 bp | GGGCAGGGTGGTTTGGAGGCTCGCTGCTGCCAGAGGACAAGGTCGTaGAAGAGTCTGTCATATCGCTGCTGCAACTGCTGTCCCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GQGGLEARCCQRTRS*KSLSYRCCNCCPPV Trigger: AACTGGGGGACAGCAGTTGCAGCAGCGATATGACAGACTCTTCCACGACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | AACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCCCTCCAGGCGGCCATTaGCCACGGCCACTGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NPKITKSSNRVSGQEEGTPPGGH*PRPLPS Trigger: ACTTGGCAGTGGCCGTGGCAAATGGCCGCCTGGAGG...GGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGGAGCATCTTACAGTACAGAAAGAGGGACTGCGAGGCTCCAGGAGAGCCCTGGGGCTGGAGGAAATaGGCTTCCTCCAGGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARSILQYRKRDCEAPGEPWGWRK*ASSRRP Trigger: TGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCCA...GGGCTCTCCTGGAGCCTCGCAGTCCCTCTTTCTGTACTGTAAGATGCTCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | CTCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGATGGGGCTGGAGGAAATaGGCTTCCTCCAGGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGEPQDHKEQQQGLRAGRWGWRK*ASSRRP Trigger: TGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCCA...TCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 90 bp | GGCTACCTTCTCTCAGCCCTCCAAGTCCGCTGTTCAGGAAGCAACTaGCGTCCAGGTTGGCATTCTCATCTAGGATGCCCGATGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GYLLSALQVRCSGSN*RPGWHSHLGCPMRG Trigger: GCCTCGCATCGGGCATCCTAGATGAGAATGCCAACCTGGACGCCAGTTGCTTCCTGAACAGCGGACTTGGAGGGCTGAGAGAAGGTAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 90 bp | AGACAGGCCCACGAGAGACTCCAGGAAGCAAGTGCTCGCATCCCGTaGTGGAGAGAAGCTGGGCAATGGGTGGAAGGTCTCAAGGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: RQAHERLQEASARIP*WREAGQWVEGLKAI Trigger: GATAGCCTTGAGACCTTCCACCCATTGCCCAGCTTCTCTCCACCACGGGATGCGAGCACTTGCTTCCTGGAGTCTCTCGTGGGCCTGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGGAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAACTGCTCACAGGGGGCTaGGAAGGCGGAAAGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGNPKITKSSNRVSGQEELLTGG*EGGKGE Trigger: TTCCCCCTTTCCGCCTTCCAAGCCCCCTGTGAGCAG...TTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTCCCCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | TGTCAGCTCAGGTACAGTGTGTTCCCACAAGCACACAGGCTGGCAAGGCCTCCTCTGAGGTTATCCAAGTaGCCCACACCCCCTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CQLRYSVFPQAHRLARPPLRLSK*PTPPPS Trigger: GGAGGGAGGGGGTGTGGGCAACTTGGATAACCTCAG...AGGAGGCCTTGCCAGCCTGTGTGCTTGTGGGAACACACTGTACCTGAGCTGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS GCA 90 bp | CAGAGGACAAGGTCGTGGAAGAGTCTGTCATATCGCTGCTGCAACTaGTGTCCCCCAGTTCACTGCTCACAGGGGGCTTGGAAGGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QRTRSWKSLSYRCCN*CPPVHCSQGAWKAE Trigger: TTCCGCCTTCCAAGCCCCCTGTGAGCAGTGAACTGGGGGACAGCAGTTGCAGCAGCGATATGACAGACTCTTCCACGACCTTGTCCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 90 bp | ACTGGCACAGGCTCCAACAAAGGTGCCAAGGCAGCATCCTCAAACTaGCTCTCCAGAAGGGGTGCCAGGACTTCTGTAACCGGCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGTGSNKGAKAASSN*LSRRGARTSVTGSD Trigger: GTCTGAGCCGGTTACAGAAGTCCTGGCACCCCTTCTGGAGAGCCAGTTTGAGGATGCTGCCTTGGCACCTTTGTTGGAGCCTGTGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | GTAGGAGACCGTTACATACATAGACCTCGGGGAACCCCAAGATCACAAAGAGCAGGTGGGCAGGGTGGTTaGGAGGCTCGCTGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGDRYIHRPRGTPRSQRAGGQGG*EARCCQ Trigger: CTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACC...TGCTCTTTGTGATCTTGGGGTTCCCCGAGGTCTATGTATGTAACGGTCTCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | GAACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTGAGGTTATCCAAGTaGCCCACACCCCCTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EPQDHKEQQQGLRAGRRHLRLSK*PTPPPS Trigger: GGAGGGAGGGGGTGTGGGCAACTTGGATAACCTCAG...GTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGGAGCAAGGAGCATCTTACAGTACAGAAAGAGGGACTGCGAGGCTCCAGGCTGAGGTTATCCAAGTaGCCCACACCCCCTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWSKEHLTVQKEGLRGSRLRLSK*PTPPPS Trigger: GGAGGGAGGGGGTGTGGGCAACTTGGATAACCTCAG...CCTGGAGCCTCGCAGTCCCTCTTTCTGTACTGTAAGATGCTCCTTGCTCCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS TCA 90 bp | CCCCTCCCTCCTCCTCCTCCTCCTCAATTCCGAGGTCAGAGTCACTaGAATTCAGGATCTGTTCCAGGCTGTCTTCATCTACGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PLPPPPPPQFRGQSH*NSGSVPGCLHLRQT Trigger: GGTCTGGCGTAGATGAAGACAGCCTGGAACAGATCCTGAATTTCAGTGACTCTGACCTCGGAATTGAGGAGGAGGAGGAGGAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 90 bp | GAGAGAAGCTGGGCAATGGGTGGAAGGTCTCAAGGCTATCCGGGCTaGCCGACACCCTTCGGGAAGTATAGTGAGGTCCCAGACTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERSWAMGGRSQGYPG*PTPFGKYSEVPDYN Trigger: ATTATAGTCTGGGACCTCACTATACTTCCCGAAGGGTGTCGGGCAGCCCGGATAGCCTTGAGACCTTCCACCCATTGCCCAGCTTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCTCCTTCAGGCATACAGTAGGAGGTGGAAGACCTCTGTTTGGACATAAACTGCTCACAGGGGGCTaGGAAGGCGGAAAGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSSFRHTVGGGRPLFGHKLLTGG*EGGKGE Trigger: TTCCCCCTTTCCGCCTTCCAAGCCCCCTGTGAGCAG...TTTATGTCCAAACAGAGGTCTTCCACCTCCTACTGTATGCCTGAAGGAGGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | AACCCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCCAACTGGCGTCCAGGTaGGCATTCTCATCTAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NPKITKSSNRVSGQEEGTQLASR*AFSSRM Trigger: CATCCTAGATGAGAATGCCAACCTGGACGCCAGTTG...GGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | CCCAAGATCACAAAGAGCAGCAACAGGGTCTCAGGGCAGGAAGAAGGCACCTTACAACTGGCGTCCAGGTaGGCATTCTCATCTAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PKITKSSNRVSGQEEGTLQLASR*AFSSRM Trigger: CATCCTAGATGAGAATGCCAACCTGGACGCCAGTTG...TAAGGTGCCTTCTTCCTGCCCTGAGACCCTGTTGCTGCTCTTTGTGATCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS-3UTR CAA 90 bp | TACAGATATAAATTACATCTTCACAGTCCAGAAGACCTAGCTCCTATGGTTCACCCTCCAGGCGGCCATTaGCCACGGCCACTGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YRYKLHLHSPEDLAPMVHPPGGH*PRPLPS Trigger: ACTTGGCAGTGGCCGTGGCAAATGGCCGCCTGGAGG...GTGAACCATAGGAGCTAGGTCTTCTGGACTGTGAAGATGTAATTTATATCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
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| CDS-3UTR CAA 90 bp | GAGGTGGAAGACCTCTGTTTGGACATAAAGAGACCAGGCATTGAAAGAGGGGTACAACTGGCGTCCAGGTaGGCATTCTCATCTAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: EVEDLCLDIKRPGIERGVQLASR*AFSSRM Trigger: CATCCTAGATGAGAATGCCAACCTGGACGCCAGTTG...TACCCCTCTTTCAATGCCTGGTCTCTTTATGTCCAAACAGAGGTCTTCCACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035101.9 ENSMUST00000215916.2 |
||
| CDS CCA 72 bp | ACGCCAGACCGGAAGCTGGGACCTGGCAGGCTGGGGTaGGCAGGGTGGTTTGGAGGCTCGCTGCTGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TPDRKLGPGRLG*AGWFGGSLLPE Trigger: CTCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAGCCTGCCAGGTCCCAGCTTCCGGTCTGGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 72 bp | GCCGGAAGCCCGAAGGAGAGCCCGTCGCTGCCGAGGTaGATGGGGCTGGAGGAAATTGGCTTCCTCCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AGSPKESPSLPR*MGLEEIGFLQA Trigger: CGCCTGGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTCGGCAGCGACGGGCTCTCCTTCGGGCTTCCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 72 bp | CCCGTCGCTGCCGAGGTGGATGGGGCTGGAGGAAATTaGCTTCCTCCAGGCGGCCATTTGCCACGGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PVAAEVDGAGGN*LPPGGHLPRPL Trigger: CAGTGGCCGTGGCAAATGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTCGGCAGCGACGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 72 bp | GAAGCCCGAAGGAGAGCCCGTCGCTGCCGAGGTGGATaGGGCTGGAGGAAATTGGCTTCCTCCAGGCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EARRRARRCRGG*GWRKLASSRRP Trigger: TGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTCGGCAGCGACGGGCTCTCCTTCGGGCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CAA 72 bp | GCCCGTCGCTGCCGAGGTGGATGGGGCTGGAGGAAATaGGCTTCCTCCAGGCGGCCATTTGCCACGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: ARRCRGGWGWRK*ASSRRPFATAT Trigger: AGTGGCCGTGGCAAATGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTCGGCAGCGACGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CAA 90 bp | CGAAGGAGAGCCCGTCGCTGCCGAGGTGGATGGGGCTGGAGGAAATaGGCTTCCTCCAGGCGGCCATTTGCCACGGCCACTGCCAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRRARRCRGGWGWRK*ASSRRPFATATAKS Trigger: GGACTTGGCAGTGGCCGTGGCAAATGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTCGGCAGCGACGGGCTCTCCTTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 72 bp | GCAGGCTGGGGTGGGCAGGGTGGTTTGGAGGCTCGCTaGTGCCAGAGGACAAGGTCGTGGAAGAGTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AGWGGQGGLEAR*CQRTRSWKSLS Trigger: TGACAGACTCTTCCACGACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 72 bp | TCACAGGAGGATAAGCTGAGGTCCCAGGAGCTGCTCTaGACGGCGTCCCCCTCAGGGGACCCAGAACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SQEDKLRSQELL*TASPSGDPELP Trigger: TGGCAGTTCTGGGTCCCCTGAGGGGGACGCCGTCCAGAGCAGCTCCTGGGACCTCAGCTTATCCTCCTGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 72 bp | CTCGCATCCCGTGGTGGAGAGAAGCTGGGCAATGGGTaGAAGGTCTCAAGGCTATCCGGGCTGCCCGACACC | + |
|
Preference number: 6 (lower is better) Translates to: LASRGGEKLGNG*KVSRLSGLPDT Trigger: GGTGTCGGGCAGCCCGGATAGCCTTGAGACCTTCCACCCATTGCCCAGCTTCTCTCCACCACGGGATGCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS TCA 72 bp | GCTCCCGAGGAGCCCGCTTCAGGATGGACGGGGGAGTaGAACTCTGGAGGCCACAGGAGTCCTGATCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: APEEPASGWTGE*NSGGHRSPDQT Trigger: AGTCTGATCAGGACTCCTGTGGCCTCCAGAGTTTCACTCCCCCGTCCATCCTGAAGCGGGCTCCTCGGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035101.9 ENSMUST00000213936.2 ENSMUST00000214058.2 ENSMUST00000215916.2 ENSMUST00000216929.2 |
||
| CDS CAA 90 bp | GAGGTGGATGGGGCTGGAGGAAATTGGCTTCCTCCAGGCGGCCATTaGCCACGGCCACTGCCAAGTCCTCCTCTACAGAGGCGTCATCGA | + |
|
Preference number: 6 (lower is better) Translates to: EVDGAGGNWLPPGGH*PRPLPSPPLQRRHR Trigger: TCGATGACGCCTCTGTAGAGGAGGACTTGGCAGTGGCCGTGGCAAATGGCCGCCTGGAGGAAGCCAATTTCCTCCAGCCCCATCCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS TCA 72 bp | CCTGGAGAAGCTCAAAGGAGTCACAGGAGGATAAGCTaGGGTCCCAGGAGCTGCTCTGGACGGCGTCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGEAQRSHRRIS*GPRSCSGRRPP Trigger: AGGGGGACGCCGTCCAGAGCAGCTCCTGGGACCTCAGCTTATCCTCCTGTGACTCCTTTGAGCTTCTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 72 bp | AAACGGCGGCGGAGCTTCTCACGCCGAGCCCGGACCTaGTCCTGTGTAAACTCAGCTAAGGAGAAAAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KRRRSFSRRART*SCVNSAKEKRR Trigger: CCGCCTTTTCTCCTTAGCTGAGTTTACACAGGAGCAGGTCCGGGCTCGGCGTGAGAAGCTCCGCCGCCGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 72 bp | ATTGGCTTCCTCCAGGCGGCCATTTGCCACGGCCACTaGCAAGTCCTCCTCTACAGAGGCGTCATCGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: IGFLQAAICHGH*QVLLYRGVIDG Trigger: GCCATCGATGACGCCTCTGTAGAGGAGGACTTGGCAGTGGCCGTGGCAAATGGCCGCCTGGAGGAAGCCAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 72 bp | GGCTGGGGTGGGCAGGGTGGTTTGGAGGCTCGCTGCTaGCAGAGGACAAGGTCGTGGAAGAGTCTGTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: GWGGQGGLEARC*QRTRSWKSLSY Trigger: ATATGACAGACTCTTCCACGACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACCACCCTGCCCACCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 72 bp | ATAGTAGACGGTGATGCCGTTAAAGGCCACGTGACCTaGACGCTCCCGAGGAGCCCGCTTCAGGATGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: IVDGDAVKGHVT*TLPRSPLQDGR Trigger: CCGTCCATCCTGAAGCGGGCTCCTCGGGAGCGTCCAGGTCACGTGGCCTTTAACGGCATCACCGTCTACTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035101.9 ENSMUST00000213936.2 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 72 bp | GGAAGCAAGTGCTCGCATCCCGTGGTGGAGAGAAGCTaGGCAATGGGTGGAAGGTCTCAAGGCTATCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSKCSHPVVERS*AMGGRSQGYPG Trigger: GCCCGGATAGCCTTGAGACCTTCCACCCATTGCCCAGCTTCTCTCCACCACGGGATGCGAGCACTTGCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 72 bp | GTAAACTCAGCTAAGGAGAAAAGGCGGCAGGTGCTGTaGCGAGAAGCCATGCCCAGGGTACAGCCACCACGG | + |
|
Preference number: 6 (lower is better) Translates to: VNSAKEKRRQVL*REAMPRVQPPR Trigger: CCGTGGTGGCTGTACCCTGGGCATGGCTTCTCGGCACAGCACCTGCCGCCTTTTCTCCTTAGCTGAGTTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS GCA 72 bp | CAAGGCAGCATCCTCAAACTGGCTCTCCAGAAGGGGTaGCAGGACTTCTGTAACCGGCTCAGACAGGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QGSILKLALQKG*QDFCNRLRQAH Trigger: GTGGGCCTGTCTGAGCCGGTTACAGAAGTCCTGGCACCCCTTCTGGAGAGCCAGTTTGAGGATGCTGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
||
| CDS CCA 72 bp | CACGAGAGACTCCAGGAAGCAAGTGCTCGCATCCCGTaGTGGAGAGAAGCTGGGCAATGGGTGGAAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HERLQEASARIP*WREAGQWVEGL Trigger: GAGACCTTCCACCCATTGCCCAGCTTCTCTCCACCACGGGATGCGAGCACTTGCTTCCTGGAGTCTCTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CAA 90 bp | CTCAGCCCTCCAAGTCCGCTGTTCAGGAAGCAACTGGCGTCCAGGTaGGCATTCTCATCTAGGATGCCCGATGCGAGGCTAGAGCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSPPSPLFRKQLASR*AFSSRMPDARLEPD Trigger: GTCTGGCTCTAGCCTCGCATCGGGCATCCTAGATGAGAATGCCAACCTGGACGCCAGTTGCTTCCTGAACAGCGGACTTGGAGGGCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS GCA 72 bp | AGGTCGTGGAAGAGTCTGTCATATCGCTGCTGCAACTaGTGTCCCCCAGTTCACTGCTCACAGGGGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RSWKSLSYRCCN*CPPVHCSQGAW Trigger: CCAAGCCCCCTGTGAGCAGTGAACTGGGGGACAGCAGTTGCAGCAGCGATATGACAGACTCTTCCACGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 72 bp | CTGCCGGGGTCACCGGTACCAAAGATGTCAGCCAGATaGAAGCAGCTGAGGTTATCCAAGTTGCCCACACCC | + |
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Preference number: 6 (lower is better) Translates to: LPGSPVPKMSAR*KQLRLSKLPTP Trigger: GGGTGTGGGCAACTTGGATAACCTCAGCTGCTTCCATCTGGCTGACATCTTTGGTACCGGTGACCCCGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 72 bp | CTCTCAGCCCTCCAAGTCCGCTGTTCAGGAAGCAACTaGCGTCCAGGTTGGCATTCTCATCTAGGATGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LSALQVRCSGSN*RPGWHSHLGCP Trigger: CGGGCATCCTAGATGAGAATGCCAACCTGGACGCCAGTTGCTTCCTGAACAGCGGACTTGGAGGGCTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 72 bp | GAGAGACTCCAGGAAGCAAGTGCTCGCATCCCGTGGTaGAGAGAAGCTGGGCAATGGGTGGAAGGTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: ERLQEASARIPW*REAGQWVEGLK Trigger: CTTGAGACCTTCCACCCATTGCCCAGCTTCTCTCCACCACGGGATGCGAGCACTTGCTTCCTGGAGTCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CAA 90 bp | GTACCAAAGATGTCAGCCAGATGGAAGCAGCTGAGGTTATCCAAGTaGCCCACACCCCCTCCCTCCTCCTCCTCCTCCTCAATTCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: VPKMSARWKQLRLSK*PTPPPSSSSSSIPR Trigger: CCTCGGAATTGAGGAGGAGGAGGAGGAGGGAGGGGGTGTGGGCAACTTGGATAACCTCAGCTGCTTCCATCTGGCTGACATCTTTGGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS TCA 72 bp | CACCGGTACCAAAGATGTCAGCCAGATGGAAGCAGCTaGGGTTATCCAAGTTGCCCACACCCCCTCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: HRYQRCQPDGSS*GYPSCPHPLPP Trigger: AGGAGGGAGGGGGTGTGGGCAACTTGGATAACCTCAGCTGCTTCCATCTGGCTGACATCTTTGGTACCGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS GCA 72 bp | AGGACAAGGTCGTGGAAGAGTCTGTCATATCGCTGCTaGAACTGCTGTCCCCCAGTTCACTGCTCACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RTRSWKSLSYRC*NCCPPVHCSQG Trigger: CCCCTGTGAGCAGTGAACTGGGGGACAGCAGTTGCAGCAGCGATATGACAGACTCTTCCACGACCTTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 72 bp | GGTTTGGAGGCTCGCTGCTGCCAGAGGACAAGGTCGTaGAAGAGTCTGTCATATCGCTGCTGCAACTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GLEARCCQRTRS*KSLSYRCCNCC Trigger: ACAGCAGTTGCAGCAGCGATATGACAGACTCTTCCACGACCTTGTCCTCTGGCAGCAGCGAGCCTCCAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CCA 72 bp | GGCTCCAACAAAGGTGCCAAGGCAGCATCCTCAAACTaGCTCTCCAGAAGGGGTGCCAGGACTTCTGTAACC | + |
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Preference number: 6 (lower is better) Translates to: GSNKGAKAASSN*LSRRGARTSVT Trigger: GGTTACAGAAGTCCTGGCACCCCTTCTGGAGAGCCAGTTTGAGGATGCTGCCTTGGCACCTTTGTTGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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| CDS CAA 72 bp | CCAAGTCCGCTGTTCAGGAAGCAACTGGCGTCCAGGTaGGCATTCTCATCTAGGATGCCCGATGCGAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: PSPLFRKQLASR*AFSSRMPDARL Trigger: TAGCCTCGCATCGGGCATCCTAGATGAGAATGCCAACCTGGACGCCAGTTGCTTCCTGAACAGCGGACTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035101.9 ENSMUST00000214058.2 ENSMUST00000215916.2 |
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