Pregenerated sensors for CSPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056763Ensembl transcript IDs: ENSMUST00000071087.12, ENSMUST00000117415.8, ENSMUST00000118263.8, ENSMUST00000119714.8, ENSMUST00000122156.8, ENSMUST00000149214.3, ENSMUST00000155974.8, ENSMUST00000186294.7, ENSMUST00000187226.7, ENSMUST00000188449.7, ENSMUST00000191012.7
Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CATTCTGTCCAACAGTATTCACAGCTGGCGGTGCTACCTGGTGAGTaGCAGGGGCAGAGACATGAGGGGCAGGCTGTCCTCCAATCATTC | + |
Preference number: 1 (lower is better) Translates to: HSVQQYSQLAVLPGE*QGQRHEGQAVLQSF Trigger: GAATGATTGGAGGACAGCCTGCCCCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGTGAATACTGTTGGACAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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3UTR TCA 90 bp | GACAGGGGCAGAGACATGAGGGGCAGGCTGTCCTCCAATCATTCCTaGACCATAGTATACAATATTGGGATCCAGTGTATTTCTGGCACC | + |
Preference number: 1 (lower is better) Translates to: DRGRDMRGRLSSNHS*TIVYNIGIQCISGT Trigger: GGTGCCAGAAATACACTGGATCCCAATATTGTATACTATGGTTCAGGAATGATTGGAGGACAGCCTGCCCCTCATGTCTCTGCCCCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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3UTR TCA 90 bp | TCCTATGGAATGTGTAACTACAGATATGAAAATGAGCAGCTTGTTTaGATCTTTCATTGCCTAGCAGCTGGCATAGTCACAGCAACAGCA | + |
Preference number: 1 (lower is better) Translates to: SYGMCNYRYENEQLV*IFHCLAAGIVTATA Trigger: TGCTGTTGCTGTGACTATGCCAGCTGCTAGGCAATGAAAGATTCAAACAAGCTGCTCATTTTCATATCTGTAGTTACACATTCCATAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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3UTR CCA 90 bp | AAAATAAGATGGAGGCAGAAAAATGTAACATTTAATCATGGCTCATaGATGATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACA | + |
Preference number: 1 (lower is better) Translates to: KIRWRQKNVTFNHGS*MITNPFAPMECVTT Trigger: TGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTGCCTCCATCTTATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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3UTR-3UTR TCA 90 bp | TGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTCCTGCAGAGGGCAGCTGTaGTGGTGGAGGGAAGGCATT | + |
Preference number: 2 (lower is better) Translates to: CSRLLSKSSPFNLFLLRSCRGQL*WWREGI Trigger: AATGCCTTCCCTCCACCATCACAGCTGCCCTCTGCA...GGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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3UTR-3UTR CCA 90 bp | ATTCACAGCTGGCGGTGCTACCTGGTGAGTGACAGGGGCAGAGACATGAGGGGCCATAGTATACAATATTaGGATCCAGTGTATTTCTGG | + |
Preference number: 2 (lower is better) Translates to: IHSWRCYLVSDRGRDMRGHSIQY*DPVYFW Trigger: CCAGAAATACACTGGATCCCAATATTGTATACTATG...GCCCCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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3UTR CAA 90 bp | GTCAGTCATCTGGGAAGCTATGATCCAAAACAACCTGAGATTTCTTaGGAAGCCACTGGCAACAGGAATCCAGACTGTGGATCTGAATCC | + |
Preference number: 2 (lower is better) Translates to: VSHLGSYDPKQPEIS*EATGNRNPDCGSES Trigger: GGATTCAGATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGAAATCTCAGGTTGTTTTGGATCATAGCTTCCCAGATGACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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3UTR-3UTR CCA 90 bp | TTTGAAGAAACAGTGTTCAGAATGGAGATCATAAGAACCAGCCTTAAGTACTCTTTCTTTGGAAGCCACTaGCAACAGGAATCCAGACTG | + |
Preference number: 2 (lower is better) Translates to: FEETVFRMEIIRTSLKYSFFGSH*QQESRL Trigger: CAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGAA...AGAGTACTTAAGGCTGGTTCTTATGATCTCCATTCTGAACACTGTTTCTTCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122156.8 |
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3UTR-3UTR CCA 90 bp | TTAACATCTAAGATTAGGATGCCTAGCAACCTAGTTTTAACTTACTGCGTAGGGAACCTGAGATTTCTTTaGAAGCCACTGGCAACAGGA | + |
Preference number: 2 (lower is better) Translates to: LTSKIRMPSNLVLTYCVGNLRFL*KPLATG Trigger: TCCTGTTGCCAGTGGCTTCCAAAGAAATCTCAGGTT...CCCTACGCAGTAAGTTAAAACTAGGTTGCTAGGCATCCTAATCTTAGATGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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3UTR-3UTR CCA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTATACTGCGTAGGGAACTaGGTTTTATCCCTGTCAGTC | + |
Preference number: 2 (lower is better) Translates to: GAFPELQTIKIQLKETRVYCVGN*VLSLSV Trigger: GACTGACAGGGATAAAACCCAGTTCCCTACGCAGTA...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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3UTR-3UTR CCA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTATCCCTGTCAGTCATCTaGGAAGCTATGATCCAAAAC | + |
Preference number: 2 (lower is better) Translates to: GAFPELQTIKIQLKETRVSLSVI*EAMIQN Trigger: GTTTTGGATCATAGCTTCCCAGATGACTGACAGGGA...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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3UTR-3UTR GCA 90 bp | CAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTAACAGTGGCTGTATTGTTTCACAGTaGTGTGTACACTCTAGCTCA | + |
Preference number: 2 (lower is better) Translates to: QVYKTSLSELFLHNANSGCIVSQ*CVHSSS Trigger: TGAGCTAGAGTGTACACAGCACTGTGAAACAATACA...GCCACTGTTAGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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3UTR TCA 72 bp | CAACAGTATTCACAGCTGGCGGTGCTACCTGGTGAGTaGCAGGGGCAGAGACATGAGGGGCAGGCTGTCCTC | + |
Preference number: 3 (lower is better) Translates to: QQYSQLAVLPGE*QGQRHEGQAVL Trigger: GAGGACAGCCTGCCCCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGTGAATACTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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3UTR GCA 72 bp | CTGTTCATTCTGTCCAACAGTATTCACAGCTGGCGGTaGTACCTGGTGAGTGACAGGGGCAGAGACATGAGG | + |
Preference number: 3 (lower is better) Translates to: LFILSNSIHSWR*YLVSDRGRDMR Trigger: CCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGTGAATACTGTTGGACAGAATGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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3UTR GCA 72 bp | TACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTaGGTTCCCTTGCAGAGGGCAGCTGTGATGGTGGAG | + |
Preference number: 3 (lower is better) Translates to: YCQNLVLLICSS*VPLQRAAVMVE Trigger: CTCCACCATCACAGCTGCCCTCTGCAAGGGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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3UTR CCA 72 bp | TGGGAAGCTATGATCCAAAACAACCTGAGATTTCTTTaGAAGCCACTGGCAACAGGAATCCAGACTGTGGAT | + |
Preference number: 3 (lower is better) Translates to: WEAMIQNNLRFL*KPLATGIQTVD Trigger: ATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGAAATCTCAGGTTGTTTTGGATCATAGCTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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3UTR CCA 72 bp | CCTAGCAACCTAGTTTTAACTTACTGCGTAGGGAACTaGGTTTTATCCCTGTCAGTCATCTGGGAAGCTATG | + |
Preference number: 3 (lower is better) Translates to: PSNLVLTYCVGN*VLSLSVIWEAM Trigger: CATAGCTTCCCAGATGACTGACAGGGATAAAACCCAGTTCCCTACGCAGTAAGTTAAAACTAGGTTGCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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3UTR-3UTR CAA 90 bp | TGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTCCGGTGGAGGGAAGGCATaGTCTTCAATAACAGGATAT | + |
Preference number: 3 (lower is better) Translates to: CSRLLSKSSPFNLFLLRSGGGKA*SSITGY Trigger: ATATCCTGTTATTGAAGACAATGCCTTCCCTCCACC...GGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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3UTR CCA 72 bp | TGCGTAGGGAACTGGGTTTTATCCCTGTCAGTCATCTaGGAAGCTATGATCCAAAACAACCTGAGATTTCTT | + |
Preference number: 3 (lower is better) Translates to: CVGNWVLSLSVI*EAMIQNNLRFL Trigger: AAGAAATCTCAGGTTGTTTTGGATCATAGCTTCCCAGATGACTGACAGGGATAAAACCCAGTTCCCTACGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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3UTR GCA 72 bp | AAGATTAGGATGCCTAGCAACCTAGTTTTAACTTACTaGGTAGGGAACTGGGTTTTATCCCTGTCAGTCATC | + |
Preference number: 3 (lower is better) Translates to: KIRMPSNLVLTY*VGNWVLSLSVI Trigger: GATGACTGACAGGGATAAAACCCAGTTCCCTACGCAGTAAGTTAAAACTAGGTTGCTAGGCATCCTAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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3UTR-3UTR CAA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTACAACCTGAGATTTCTTaGGAAGCCACTGGCAACAGG | + |
Preference number: 3 (lower is better) Translates to: GAFPELQTIKIQLKETRVQPEIS*EATGNR Trigger: CCTGTTGCCAGTGGCTTCCAAAGAAATCTCAGGTTG...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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3UTR TCA 72 bp | ATGTGTAACTACAGATATGAAAATGAGCAGCTTGTTTaGATCTTTCATTGCCTAGCAGCTGGCATAGTCACA | + |
Preference number: 3 (lower is better) Translates to: MCNYRYENEQLV*IFHCLAAGIVT Trigger: TGTGACTATGCCAGCTGCTAGGCAATGAAAGATTCAAACAAGCTGCTCATTTTCATATCTGTAGTTACACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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3UTR TCA 72 bp | ACCATCAAGATCCCAGGAGTGCTGTGGTTCCCAAACTaGGAACTGAGAGGTCTTTTAATAAACTTTAAATAT | + |
Preference number: 3 (lower is better) Translates to: TIKIPGVLWFPN*ELRGLLINFKY Trigger: ATATTTAAAGTTTATTAAAAGACCTCTCAGTTCTCAGTTTGGGAACCACAGCACTCCTGGGATCTTGATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122156.8 |
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3UTR TCA 72 bp | ATCATAAGAACCAGCCTTAAGTACTCTCAGTACAGTTaGAGGAAGTTGGTAAAGGTCGTTACATTTATGAGA | + |
Preference number: 3 (lower is better) Translates to: IIRTSLKYSQYS*RKLVKVVTFMR Trigger: TCTCATAAATGTAACGACCTTTACCAACTTCCTTCAACTGTACTGAGAGTACTTAAGGCTGGTTCTTATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122156.8 |
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3UTR-3UTR CAA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTATTTTTACTCTCCTACTaGGTTAAGCTGAGACAAGAA | + |
Preference number: 3 (lower is better) Translates to: GAFPELQTIKIQLKETRVFLLSY*VKLRQE Trigger: TTCTTGTCTCAGCTTAACCAAGTAGGAGAGTAAAAA...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR TCA 90 bp | GATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGAGAGGGTTTATGGCGGTGCTACCTGGTaGGTGACAGGGGCAGAGACA | + |
Preference number: 4 (lower is better) Translates to: DTGERSTVKGTTGSERVYGGATW*VTGAET Trigger: TGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCC...ATAAACCCTCTCGGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | ATTCACAGCTGGCGGTGCTACCTGGTGAGTGACAGGGGCAGAGACATGAGGGGCTCCAAAGAGCATGCCTaGAAATGGACTTGTGATATC | + |
Preference number: 4 (lower is better) Translates to: IHSWRCYLVSDRGRDMRGSKEHA*KWTCDI Trigger: GATATCACAAGTCCATTTGCAGGCATGCTCTTTGGA...GCCCCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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CDS-3UTR GCA 90 bp | ATTCACAGCTGGCGGTGCTACCTGGTGAGTGACAGGGGCAGAGACATGAGGGGCCTCTTCTTCTTCTGTTaGTCAGCTATCTGTTCTAGT | + |
Preference number: 4 (lower is better) Translates to: IHSWRCYLVSDRGRDMRGLFFFC*SAICSS Trigger: ACTAGAACAGATAGCTGAGCAACAGAAGAAGAAGAG...GCCCCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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CDS-3UTR CCA 90 bp | GTCAGTCATCTGGGAAGCTATGATCCAAAACAACCTGAGATTTCTTTGGAAGCCGCGGGCTCTTCTCTCTaGGACACCAGCGCTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: VSHLGSYDPKQPEISLEAAGSSL*DTSAAR Trigger: TCTGGCAGCGCTGGTGTCCCAGAGAGAAGAGCCCGC...GGCTTCCAAAGAAATCTCAGGTTGTTTTGGATCATAGCTTCCCAGATGACTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | AGTATTCACAGCTGGCGGTGCTACCTGGTGAGTGACAGGGGCAGAGACATGAGGGAGCATGCCTGCAAATaGACTTGTGATATCGAGATC | + |
Preference number: 4 (lower is better) Translates to: SIHSWRCYLVSDRGRDMREHACK*TCDIEI Trigger: GATCTCGATATCACAAGTCCATTTGCAGGCATGCTC...CCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGTGAATACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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CDS-3UTR GCA 90 bp | TGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTCCTCGTCACTGTCCAGGTaGAGCAGCCGCCCCTGCAAA | + |
Preference number: 4 (lower is better) Translates to: CSRLLSKSSPFNLFLLRSSSLSR*SSRPCK Trigger: TTTGCAGGGGCGGCTGCTGCACCTGGACAGTGACGA...GGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR GCA 90 bp | ATTCACAGCTGGCGGTGCTACCTGGTGAGTGACAGGGGCAGAGACATGAGGGGCTGTTCTAGTAGTTCTTaGCTATATTTCTCCTTCCTT | + |
Preference number: 4 (lower is better) Translates to: IHSWRCYLVSDRGRDMRGCSSSS*LYFSFL Trigger: AAGGAAGGAGAAATATAGGCAAGAACTACTAGAACA...GCCCCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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CDS-3UTR GCA 90 bp | GCTAGTAACAGTGTATTGTTTCACAGTGCTGTGTACACTCTAGCTCACCACCTCGGTCTCGGTCGGCTCTaGAATGTTGTCTGTCAAGCA | + |
Preference number: 4 (lower is better) Translates to: ASNSVLFHSAVYTLAHHLGLGRL*NVVCQA Trigger: TGCTTGACAGACAACATTGCAGAGCCGACCGAGACC...GAGGTGGTGAGCTAGAGTGTACACAGCACTGTGAAACAATACACTGTTACTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | GATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGAGAGGGTTTATCTATTAAGCCTCTTCTaGTGCTCTCGGAGTAGGGCC | + |
Preference number: 4 (lower is better) Translates to: DTGERSTVKGTTGSERVYLLSLF*CSRSRA Trigger: GGCCCTACTCCGAGAGCAGCAGAAGAGGCTTAATAG...ATAAACCCTCTCGGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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3UTR CAA 72 bp | TGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTaGTTCCTCCTGCGTTCCCTTGCAGAGGGCAGCTGT | + |
Preference number: 4 (lower is better) Translates to: CSRLLSKSSPFN*FLLRSLAEGSC Trigger: ACAGCTGCCCTCTGCAAGGGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR GCA 90 bp | TGTGTACACTCTAGCTCACCACCTCTTAATGGCAAGCACATTTTAATGCACATATCCCTCCTCCGCTCCTaGTCCTCCTCATACTCTTGC | + |
Preference number: 4 (lower is better) Translates to: CVHSSSPPLNGKHILMHISLLRS*SSSYSC Trigger: GCAAGAGTATGAGGAGGAGCAGGAGCGGAGGAGGGA...TATGTGCATTAAAATGTGCTTGCCATTAAGAGGTGGTGAGCTAGAGTGTACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | TGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTCCGAGTTGGTTCTTCCTTaGAGGCACTGGAGGAGACTG | + |
Preference number: 4 (lower is better) Translates to: CSRLLSKSSPFNLFLLRSELVLP*RHWRRL Trigger: CAGTCTCCTCCAGTGCCTGCAAGGAAGAACCAACTC...GGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR GCA 90 bp | TGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTCCCTATTAAGCCTCTTCTaGTGCTCTCGGAGTAGGGCC | + |
Preference number: 4 (lower is better) Translates to: CSRLLSKSSPFNLFLLRSLLSLF*CSRSRA Trigger: GGCCCTACTCCGAGAGCAGCAGAAGAGGCTTAATAG...GGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CCA 90 bp | CAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTAACAGTGGCGCGGGCTCTTCTCTCTaGGACACCAGCGCTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: QVYKTSLSELFLHNANSGAGSSL*DTSAAR Trigger: TCTGGCAGCGCTGGTGTCCCAGAGAGAAGAGCCCGC...GCCACTGTTAGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | ACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTCCTATGGAATGTGGAGGGGGAGGTGTCTaGAAAGCTACTCTGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: TFNHGSWMITNPFAPMECGGGGV*KATLGL Trigger: GAGGCCCAGAGTAGCTTTCCAGACACCTCCCCCTCC...ACATTCCATAGGAGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCTTCCTTTGGCGTCTCTaGGAGGAGCACCACCTCCGC | + |
Preference number: 4 (lower is better) Translates to: ITNPFAPMECVTTDMKMSFLWRL*EEHHLR Trigger: GCGGAGGTGGTGCTCCTCTCAGAGACGCCAAAGGAA...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | ACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTCCTATGGAATGTTGCAGAGGGCAGCTGTaGTGGTGGAGGGAAGGCATT | + |
Preference number: 4 (lower is better) Translates to: TFNHGSWMITNPFAPMECCRGQL*WWREGI Trigger: AATGCCTTCCCTCCACCATCACAGCTGCCCTCTGCA...ACATTCCATAGGAGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | GTCAGTCATCTGGGAAGCTATGATCCAAAACAACCTGAGATTTCTTTGGAAGCCTGGGCTGTTGTTGGCTaGTTGGTGGAATGTTCTCCT | + |
Preference number: 4 (lower is better) Translates to: VSHLGSYDPKQPEISLEAWAVVG*LVECSP Trigger: AGGAGAACATTCCACCAAGCAGCCAACAACAGCCCA...GGCTTCCAAAGAAATCTCAGGTTGTTTTGGATCATAGCTTCCCAGATGACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | CAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTTACAGGCCCTCCTCTTaGCGGCTTAGCCAGGGTCCC | + |
Preference number: 4 (lower is better) Translates to: QKNVTFNHGSWMITNPFAYRPSS*RLSQGP Trigger: GGGACCCTGGCTAAGCCGGCAAGAGGAGGGCCTGTA...AGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCTACAGGCCCTCCTCTTaGCGGCTTAGCCAGGGTCCC | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSYRPSS*RLSQGP Trigger: GGGACCCTGGCTAAGCCGGCAAGAGGAGGGCCTGTA...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTATACAGGCCCTCCTCTTaGCGGCTTAGCCAGGGTCCC | + |
Preference number: 4 (lower is better) Translates to: GAFPELQTIKIQLKETRVYRPSS*RLSQGP Trigger: GGGACCCTGGCTAAGCCGGCAAGAGGAGGGCCTGTA...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | TCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCAGCTTGTTCCAGTTCACCAAGGGTaGTGCCGAGTCCACTGTGCA | + |
Preference number: 4 (lower is better) Translates to: SLCSYGMCNYRYENEQLVPVHQG*CRVHCA Trigger: TGCACAGTGGACTCGGCAGCACCCTTGGTGAACTGG...AACAAGCTGCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTTCGTCACTGTCCAGGTaGAGCAGCCGCCCCTGCAAA | + |
Preference number: 4 (lower is better) Translates to: NIKVGPQARHSIQDTGERSSLSR*SSRPCK Trigger: TTTGCAGGGGCGGCTGCTGCACCTGGACAGTGACGA...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | GCTAGTAACAGTGTATTGTTTCACAGTGCTGTGTACACTCTAGCTCACCACCTCCTGTTGTTGGCTGCTTaGTGGAATGTTCTCCTTAGC | + |
Preference number: 4 (lower is better) Translates to: ASNSVLFHSAVYTLAHHLLLLAA*WNVLLS Trigger: GCTAAGGAGAACATTCCACCAAGCAGCCAACAACAG...GAGGTGGTGAGCTAGAGTGTACACAGCACTGTGAAACAATACACTGTTACTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | TCTTTGGAAGCCACTGGCAACAGGAATCCAGACTGTGGATCTGAATCCATTGCTAACTCCCAGAGTAGATaGGTCTGTTTCACCAGTAGA | + |
Preference number: 4 (lower is better) Translates to: SLEATGNRNPDCGSESIANSQSR*VCFTSR Trigger: TCTACTGGTGAAACAGACCCATCTACTCTGGGAGTT...AGCAATGGATTCAGATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAGCGGGCTCTTCTCTCTaGGACACCAGCGCTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRAGSSL*DTSAAR Trigger: TCTGGCAGCGCTGGTGTCCCAGAGAGAAGAGCCCGC...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCGCGGGCTCTTCTCTCTaGGACACCAGCGCTGCCAGA | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSAGSSL*DTSAAR Trigger: TCTGGCAGCGCTGGTGTCCCAGAGAGAAGAGCCCGC...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGAGAGGGTTTATCGAGATCAGCAGATCTaGGTGGTCCATTACAGTGAA | + |
Preference number: 4 (lower is better) Translates to: DTGERSTVKGTTGSERVYRDQQI*VVHYSE Trigger: TTCACTGTAATGGACCACCCAGATCTGCTGATCTCG...ATAAACCCTCTCGGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | CAGCAACAGCAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTCTTCCTTGCAGGCACTaGAGGAGACTGTGCCCGGGA | + |
Preference number: 4 (lower is better) Translates to: QQQQVYKTSLSELFLHNALPCRH*RRLCPG Trigger: TCCCGGGCACAGTCTCCTCCAGTGCCTGCAAGGAAG...AGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTGCTGTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | GATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGAGAGGGTTTATTTACCCCTGAGAAACTaGTTGTATTCTCGGTTGCGT | + |
Preference number: 4 (lower is better) Translates to: DTGERSTVKGTTGSERVYLPLRN*LYSRLR Trigger: ACGCAACCGAGAATACAATCAGTTTCTCAGGGGTAA...ATAAACCCTCTCGGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | TCTTTGGAAGCCACTGGCAACAGGAATCCAGACTGTGGATCTGAATCCATTGCTATTCTGCCTTACCCCTaGGAAACTGATTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: SLEATGNRNPDCGSESIAILPYP*ETDCIL Trigger: GAGAATACAATCAGTTTCTCAGGGGTAAGGCAGAAT...AGCAATGGATTCAGATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR TCA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTGTGCTACCTGGTGAGTaGCAGGGGCAGAGACATGAG | + |
Preference number: 4 (lower is better) Translates to: NIKVGPQARHSIQDTGERVLPGE*QGQRHE Trigger: CTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCAC...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | CAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTGAGCCAGGGCTCAGTTaGCGCAGAGTTGCGTCCATC | + |
Preference number: 4 (lower is better) Translates to: QKNVTFNHGSWMITNPFAEPGLS*RRVASI Trigger: GATGGACGCAACTCTGCGGCAACTGAGCCCTGGCTC...AGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | CAGCAACAGCAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTTCAGACTTTCTGAAGTaGCAGGGCGGAGCCAGGGCT | + |
Preference number: 4 (lower is better) Translates to: QQQQVYKTSLSELFLHNASDFLK*QGGARA Trigger: AGCCCTGGCTCCGCCCTGGCACTTCAGAAAGTCTGA...AGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTGCTGTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | GCTAGTAACAGTGTATTGTTTCACAGTGCTGTGTACACTCTAGCTCACCACCTCCATCTCCATGTACGGTaGATCACTTTCCAATTCTGC | + |
Preference number: 4 (lower is better) Translates to: ASNSVLFHSAVYTLAHHLHLHVR*ITFQFC Trigger: GCAGAATTGGAAAGTGATCCACCGTACATGGAGATG...GAGGTGGTGAGCTAGAGTGTACACAGCACTGTGAAACAATACACTGTTACTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | GATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGAGAGGGTTTATAACTCCCAGAGTAGATaGGTCTGTTTCACCAGTAGA | + |
Preference number: 4 (lower is better) Translates to: DTGERSTVKGTTGSERVYNSQSR*VCFTSR Trigger: TCTACTGGTGAAACAGACCCATCTACTCTGGGAGTT...ATAAACCCTCTCGGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | GCTAGTAACAGTGTATTGTTTCACAGTGCTGTGTACACTCTAGCTCACCACCTCATAACCGCTCATCAATaGGAAGAGAAACTCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: ASNSVLFHSAVYTLAHHLITAHQ*EEKLPE Trigger: CTCTGGGAGTTTCTCTTCCCATTGATGAGCGGTTAT...GAGGTGGTGAGCTAGAGTGTACACAGCACTGTGAAACAATACACTGTTACTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | ATTGTCTTCAATAACAGGATATGTCTCACCATAAGCACCAATAAAAGCACTATCCTTCCTTGCAGGCACTaGAGGAGACTGTGCCCGGGA | + |
Preference number: 4 (lower is better) Translates to: IVFNNRICLTISTNKSTILPCRH*RRLCPG Trigger: TCCCGGGCACAGTCTCCTCCAGTGCCTGCAAGGAAG...GATAGTGCTTTTATTGGTGCTTATGGTGAGACATATCCTGTTATTGAAGACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CCA 90 bp | TGTGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTTCTTCTGCACGGAGTTaGTTCTTCCTTGCAGGCACT | + |
Preference number: 4 (lower is better) Translates to: CAADYCQNLVLLICSSCVSSARS*FFLAGT Trigger: AGTGCCTGCAAGGAAGAACCAACTCCGTGCAGAAGA...AACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CCA 90 bp | TCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCAGCTTGTTCCAAGTAAACGTGCCTaGCTTCCCAGGCCCCTTATG | + |
Preference number: 4 (lower is better) Translates to: SLCSYGMCNYRYENEQLVPSKRA*LPRPLM Trigger: CATAAGGGGCCTGGGAAGCCAGGCACGTTTACTTGG...AACAAGCTGCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | GTCAGTCATCTGGGAAGCTATGATCCAAAACAACCTGAGATTTCTTTGGAAGCCTTACCCCTGAGAAACTaGTTGTATTCTCGGTTGCGT | + |
Preference number: 4 (lower is better) Translates to: VSHLGSYDPKQPEISLEALPLRN*LYSRLR Trigger: ACGCAACCGAGAATACAATCAGTTTCTCAGGGGTAA...GGCTTCCAAAGAAATCTCAGGTTGTTTTGGATCATAGCTTCCCAGATGACTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR TCA 90 bp | AGGCAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTCCGTTTCAGACTTTCTaGAGTGCCAGGGCGGAGCCA | + |
Preference number: 4 (lower is better) Translates to: RQKNVTFNHGSWMITNPFPFQTF*SARAEP Trigger: TGGCTCCGCCCTGGCACTTCAGAAAGTCTGAAACGG...AAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | GCTAGTAACAGTGTATTGTTTCACAGTGCTGTGTACACTCTAGCTCACCACCTCTCCAAAGAGCATGCCTaGAAATGGACTTGTGATATC | + |
Preference number: 4 (lower is better) Translates to: ASNSVLFHSAVYTLAHHLSKEHA*KWTCDI Trigger: GATATCACAAGTCCATTTGCAGGCATGCTCTTTGGA...GAGGTGGTGAGCTAGAGTGTACACAGCACTGTGAAACAATACACTGTTACTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTGTTCACCAAGGGTGCTaGCGAGTCCACTGTGCAAGT | + |
Preference number: 4 (lower is better) Translates to: NIKVGPQARHSIQDTGERVHQGC*RVHCAS Trigger: ACTTGCACAGTGGACTCGGCAGCACCCTTGGTGAAC...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | AGGCAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTCTCTTGCTGAATCCTTaGCCTCTGCTCCGCAAGCCG | + |
Preference number: 4 (lower is better) Translates to: RQKNVTFNHGSWMITNPFLLLNP*PLLRKP Trigger: CGGCTTGCGGAGCAGAGGGCAAGGATTCAGCAAGAG...AAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | ACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTCCTATGGAATGTCCCTTGGGCTGTTGTTaGCTGCTTGGTGGAATGTTC | + |
Preference number: 4 (lower is better) Translates to: TFNHGSWMITNPFAPMECPLGCC*LLGGMF Trigger: GAACATTCCACCAAGCAGCCAACAACAGCCCAAGGG...ACATTCCATAGGAGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | GGATCTGAATCCATTGCTGCTTTAGAATTTAAATTCACATGCACAATTTGGGGGCCCTTGGGCTGTTGTTaGCTGCTTGGTGGAATGTTC | + |
Preference number: 4 (lower is better) Translates to: GSESIAALEFKFTCTIWGPLGCC*LLGGMF Trigger: GAACATTCCACCAAGCAGCCAACAACAGCCCAAGGG...CCCCCAAATTGTGCATGTGAATTTAAATTCTAAAGCAGCAATGGATTCAGATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | TCTTTGGAAGCCACTGGCAACAGGAATCCAGACTGTGGATCTGAATCCATTGCTGTTTCAATCTTTCCTTaGCAGATAACCGCTCATCAA | + |
Preference number: 4 (lower is better) Translates to: SLEATGNRNPDCGSESIAVSIFP*QITAHQ Trigger: TTGATGAGCGGTTATCTGCCAAGGAAAGATTGAAAC...AGCAATGGATTCAGATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | CAGCAACAGCAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTTCGATAGTTAGAAGCTaGAGGGGCAAGGAGCGGAGG | + |
Preference number: 4 (lower is better) Translates to: QQQQVYKTSLSELFLHNASIVRS*RGKERR Trigger: CCTCCGCTCCTTGCCCCTCCAGCTTCTAACTATCGA...AGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTGCTGTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | TGTGTACACTCTAGCTCACCACCTCTTAATGGCAAGCACATTTTAATGCACATATCTTCTGCACGGAGTTaGTTCTTCCTTGCAGGCACT | + |
Preference number: 4 (lower is better) Translates to: CVHSSSPPLNGKHILMHISSARS*FFLAGT Trigger: AGTGCCTGCAAGGAAGAACCAACTCCGTGCAGAAGA...TATGTGCATTAAAATGTGCTTGCCATTAAGAGGTGGTGAGCTAGAGTGTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | CAGCAACAGCAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTTCCTCATACTCTTGCTaGATCCTTGCCCTCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: QQQQVYKTSLSELFLHNASSYSC*ILALCS Trigger: GGAGCAGAGGGCAAGGATTCAGCAAGAGTATGAGGA...AGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTGCTGTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | GGATCTGAATCCATTGCTGCTTTAGAATTTAAATTCACATGCACAATTTGGGGGTGGGCTGTTGTTGGCTaGTTGGTGGAATGTTCTCCT | + |
Preference number: 4 (lower is better) Translates to: GSESIAALEFKFTCTIWGWAVVG*LVECSP Trigger: AGGAGAACATTCCACCAAGCAGCCAACAACAGCCCA...CCCCCAAATTGTGCATGTGAATTTAAATTCTAAAGCAGCAATGGATTCAGATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GCTAGTAACAGTGTATTGTTTCACAGTGCTGTGTACACTCTAGCTCACCACCTCATCTTCATATGTTCTTaGATCTGGGTTATGGTAGGC | + |
Preference number: 4 (lower is better) Translates to: ASNSVLFHSAVYTLAHHLIFICS*IWVMVG Trigger: GCCTACCATAACCCAGATGCAAGAACATATGAAGAT...GAGGTGGTGAGCTAGAGTGTACACAGCACTGTGAAACAATACACTGTTACTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | TGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTCCGAAGGCTGTCTCAAGTaGTTTGTTTCATCTCCGATA | + |
Preference number: 4 (lower is better) Translates to: CSRLLSKSSPFNLFLLRSEGCLK*FVSSPI Trigger: TATCGGAGATGAAACAAAGCACTTGAGACAGCCTTC...GGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR GCA 90 bp | CAGCAACAGCAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTGAGTTGGTTCTTCCTTaGAGGCACTGGAGGAGACTG | + |
Preference number: 4 (lower is better) Translates to: QQQQVYKTSLSELFLHNAELVLP*RHWRRL Trigger: CAGTCTCCTCCAGTGCCTGCAAGGAAGAACCAACTC...AGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTGCTGTTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCCAGTTGCCGCAGAGTTaGGTCCATCATCACTCAGGT | + |
Preference number: 4 (lower is better) Translates to: ITNPFAPMECVTTDMKMSQLPQS*VHHHSG Trigger: ACCTGAGTGATGATGGACGCAACTCTGCGGCAACTG...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | TCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCAGCTTGTTTGTGTTTGGCTCTTCTaGGACATCATCCCCATCCAC | + |
Preference number: 4 (lower is better) Translates to: SLCSYGMCNYRYENEQLVCVWLF*DIIPIH Trigger: GTGGATGGGGATGATGTCCCAGAAGAGCCAAACACA...AACAAGCTGCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | CATAGTATTCAAGATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGAGCATGCCTGCAAATaGACTTGTGATATCGAGATC | + |
Preference number: 4 (lower is better) Translates to: HSIQDTGERSTVKGTTGSEHACK*TCDIEI Trigger: GATCTCGATATCACAAGTCCATTTGCAGGCATGCTC...GGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATCTTGAATACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | CAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTAACAGTGGCTCTGGAAAGCTACTCTaGGCCTCTCAGGTGGCATCT | + |
Preference number: 4 (lower is better) Translates to: QVYKTSLSELFLHNANSGSGKLL*ASQVAS Trigger: AGATGCCACCTGAGAGGCCCAGAGTAGCTTTCCAGA...GCCACTGTTAGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | GGGATCCAGTGTATTTCTGGCACCGTAAAAATAGTACGCATCATCGTAAGGAGTGGTGGTCCATTACAGTaGACACTTTTATTTTCAGCA | + |
Preference number: 4 (lower is better) Translates to: GIQCISGTVKIVRIIVRSGGPLQ*TLLFSA Trigger: TGCTGAAAATAAAAGTGTTCACTGTAATGGACCACC...ACTCCTTACGATGATGCGTACTATTTTTACGGTGCCAGAAATACACTGGATCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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CDS-3UTR TCA 90 bp | TGTGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTCTTGCAATTTTGTTCTaGAGAGCAGGAACTACAGGA | + |
Preference number: 4 (lower is better) Translates to: CAADYCQNLVLLICSSCVLAILF*RAGTTG Trigger: TCCTGTAGTTCCTGCTCTTCAGAACAAAATTGCAAG...AACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR GCA 90 bp | TCTTTGGAAGCCACTGGCAACAGGAATCCAGACTGTGGATCTGAATCCATTGCTGATTGTATTCTCGGTTaGGTTCAAGTTTCAATCTTT | + |
Preference number: 4 (lower is better) Translates to: SLEATGNRNPDCGSESIADCILG*VQVSIF Trigger: AAAGATTGAAACTTGAACGCAACCGAGAATACAATC...AGCAATGGATTCAGATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAGGTCTCGGTCGGCTCTaGAATGTTGTCTGTCAAGCA | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRGLGRL*NVVCQA Trigger: TGCTTGACAGACAACATTGCAGAGCCGACCGAGACC...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTAGGTCTCGGTCGGCTCTaGAATGTTGTCTGTCAAGCA | + |
Preference number: 4 (lower is better) Translates to: GAFPELQTIKIQLKETRVGLGRL*NVVCQA Trigger: TGCTTGACAGACAACATTGCAGAGCCGACCGAGACC...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | TCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCAGCTTGTTTTCCCAGGCCCCTTATaGTGTTCTTCATTCAGATGC | + |
Preference number: 4 (lower is better) Translates to: SLCSYGMCNYRYENEQLVFPGPL*CSSFRC Trigger: GCATCTGAATGAAGAACAGCATAAGGGGCCTGGGAA...AACAAGCTGCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | TCTTTGGAAGCCACTGGCAACAGGAATCCAGACTGTGGATCTGAATCCATTGCTATTTTTCTTTCTCTTTaGTTGTGTAATGCCCTGAGT | + |
Preference number: 4 (lower is better) Translates to: SLEATGNRNPDCGSESIAIFLSL*LCNALS Trigger: ACTCAGGGCATTACACAAGCAAAGAGAAAGAAAAAT...AGCAATGGATTCAGATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | TTAACATCTAAGATTAGGATGCCTAGCAACCTAGTTTTAACTTACTGCGTAGGGCTGTTGTTGGCTGCTTaGTGGAATGTTCTCCTTAGC | + |
Preference number: 4 (lower is better) Translates to: LTSKIRMPSNLVLTYCVGLLLAA*WNVLLS Trigger: GCTAAGGAGAACATTCCACCAAGCAGCCAACAACAG...CCCTACGCAGTAAGTTAAAACTAGGTTGCTAGGCATCCTAATCTTAGATGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGACCCTTGGGCTGTTGTTaGCTGCTTGGTGGAATGTTC | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRPLGCC*LLGGMF Trigger: GAACATTCCACCAAGCAGCCAACAACAGCCCAAGGG...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTTCTGGGCCTCTCAGGTaGCATCTCTTCAAAGTGTCT | + |
Preference number: 4 (lower is better) Translates to: NIKVGPQARHSIQDTGERSGPLR*HLFKVS Trigger: AGACACTTTGAAGAGATGCCACCTGAGAGGCCCAGA...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | CAGCAACAGCAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTAACAGTATTCACAGCTaGCGGTGCTACCTGGTGAGT | + |
Preference number: 4 (lower is better) Translates to: QQQQVYKTSLSELFLHNANSIHS*RCYLVS Trigger: ACTCACCAGGTAGCACCGCCAGCTGTGAATACTGTT...AGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTGCTGTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | GATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGAGAGGGTTTATGAAGTGGCTAAATTTTaGTCTATAGATACAACAGCC | + |
Preference number: 4 (lower is better) Translates to: DTGERSTVKGTTGSERVYEVAKF*SIDTTA Trigger: GGCTGTTGTATCTATAGACCAAAATTTAGCCACTTC...ATAAACCCTCTCGGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | GGATCTGAATCCATTGCTGCTTTAGAATTTAAATTCACATGCACAATTTGGGGGTTACCCCTGAGAAACTaGTTGTATTCTCGGTTGCGT | + |
Preference number: 4 (lower is better) Translates to: GSESIAALEFKFTCTIWGLPLRN*LYSRLR Trigger: ACGCAACCGAGAATACAATCAGTTTCTCAGGGGTAA...CCCCCAAATTGTGCATGTGAATTTAAATTCTAAAGCAGCAATGGATTCAGATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR TCA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCCTCAAAGACCAGTCCTaGATTCCTGAGTCCATCACT | + |
Preference number: 4 (lower is better) Translates to: ITNPFAPMECVTTDMKMSLKDQS*IPESIT Trigger: AGTGATGGACTCAGGAATTCAGGACTGGTCTTTGAG...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | TCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCAGCTTGTTTATGATGGTGTCGACTaGAGGAGGTCTTTGGAGTTT | + |
Preference number: 4 (lower is better) Translates to: SLCSYGMCNYRYENEQLVYDGVD*RRSLEF Trigger: AAACTCCAAAGACCTCCTTCAGTCGACACCATCATA...AACAAGCTGCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | AGGCAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTTGGGCTGTTGTTGGCTaGTTGGTGGAATGTTCTCCT | + |
Preference number: 4 (lower is better) Translates to: RQKNVTFNHGSWMITNPFWAVVG*LVECSP Trigger: AGGAGAACATTCCACCAAGCAGCCAACAACAGCCCA...AAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGATGGGCTGTTGTTGGCTaGTTGGTGGAATGTTCTCCT | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRWAVVG*LVECSP Trigger: AGGAGAACATTCCACCAAGCAGCCAACAACAGCCCA...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCTGGGCTGTTGTTGGCTaGTTGGTGGAATGTTCTCCT | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSWAVVG*LVECSP Trigger: AGGAGAACATTCCACCAAGCAGCCAACAACAGCCCA...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GGATCTGAATCCATTGCTGCTTTAGAATTTAAATTCACATGCACAATTTGGGGGAAGGCTTGGATGTTCTaGACCAGAAATGCCTACTTC | + |
Preference number: 4 (lower is better) Translates to: GSESIAALEFKFTCTIWGKAWMF*TRNAYF Trigger: GAAGTAGGCATTTCTGGTGCAGAACATCCAAGCCTT...CCCCCAAATTGTGCATGTGAATTTAAATTCTAAAGCAGCAATGGATTCAGATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | CATAGTATTCAAGATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGGTGTCAAACTAAACTaGTTTAGTCTATCAGGCGAT | + |
Preference number: 4 (lower is better) Translates to: HSIQDTGERSTVKGTTGSGVKLN*FSLSGD Trigger: ATCGCCTGATAGACTAAAGCAGTTTAGTTTGACACC...GGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATCTTGAATACTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | TGTGTACACTCTAGCTCACCACCTCTTAATGGCAAGCACATTTTAATGCACATAGAAGGCTGTCTCAAGTaGTTTGTTTCATCTCCGATA | + |
Preference number: 4 (lower is better) Translates to: CVHSSSPPLNGKHILMHIEGCLK*FVSSPI Trigger: TATCGGAGATGAAACAAAGCACTTGAGACAGCCTTC...TATGTGCATTAAAATGTGCTTGCCATTAAGAGGTGGTGAGCTAGAGTGTACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | TTAACATCTAAGATTAGGATGCCTAGCAACCTAGTTTTAACTTACTGCGTAGGGCATCTCCATGTACGGTaGATCACTTTCCAATTCTGC | + |
Preference number: 4 (lower is better) Translates to: LTSKIRMPSNLVLTYCVGHLHVR*ITFQFC Trigger: GCAGAATTGGAAAGTGATCCACCGTACATGGAGATG...CCCTACGCAGTAAGTTAAAACTAGGTTGCTAGGCATCCTAATCTTAGATGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GGATCTGAATCCATTGCTGCTTTAGAATTTAAATTCACATGCACAATTTGGGGGAACTCCCAGAGTAGATaGGTCTGTTTCACCAGTAGA | + |
Preference number: 4 (lower is better) Translates to: GSESIAALEFKFTCTIWGNSQSR*VCFTSR Trigger: TCTACTGGTGAAACAGACCCATCTACTCTGGGAGTT...CCCCCAAATTGTGCATGTGAATTTAAATTCTAAAGCAGCAATGGATTCAGATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GGATCTGAATCCATTGCTGCTTTAGAATTTAAATTCACATGCACAATTTGGGGGATAACCGCTCATCAATaGGAAGAGAAACTCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: GSESIAALEFKFTCTIWGITAHQ*EEKLPE Trigger: CTCTGGGAGTTTCTCTTCCCATTGATGAGCGGTTAT...CCCCCAAATTGTGCATGTGAATTTAAATTCTAAAGCAGCAATGGATTCAGATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | ATACAATATTGGGATCCAGTGTATTTCTGGCACCGTAAAAATAGTACGCATCATCGAGATCAGCAGATCTaGGTGGTCCATTACAGTGAA | + |
Preference number: 4 (lower is better) Translates to: IQYWDPVYFWHRKNSTHHRDQQI*VVHYSE Trigger: TTCACTGTAATGGACCACCCAGATCTGCTGATCTCG...ATGATGCGTACTATTTTTACGGTGCCAGAAATACACTGGATCCCAATATTGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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CDS-3UTR CCA 90 bp | TGTGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTACTGAAGGAGGTCTTTaGAGTTTGCTTGCAATTTTG | + |
Preference number: 4 (lower is better) Translates to: CAADYCQNLVLLICSSCVTEGGL*SLLAIL Trigger: CAAAATTGCAAGCAAACTCCAAAGACCTCCTTCAGT...AACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR TCA 90 bp | ACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTCCTATGGAATGTATTCTGCCTTACCCCTaGGAAACTGATTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: TFNHGSWMITNPFAPMECILPYP*ETDCIL Trigger: GAGAATACAATCAGTTTCTCAGGGGTAAGGCAGAAT...ACATTCCATAGGAGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | GGATCTGAATCCATTGCTGCTTTAGAATTTAAATTCACATGCACAATTTGGGGGATTCTGCCTTACCCCTaGGAAACTGATTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: GSESIAALEFKFTCTIWGILPYP*ETDCIL Trigger: GAGAATACAATCAGTTTCTCAGGGGTAAGGCAGAAT...CCCCCAAATTGTGCATGTGAATTTAAATTCTAAAGCAGCAATGGATTCAGATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCAAGGCTTGGATGTTCTaGACCAGAAATGCCTACTTC | + |
Preference number: 4 (lower is better) Translates to: ITNPFAPMECVTTDMKMSKAWMF*TRNAYF Trigger: GAAGTAGGCATTTCTGGTGCAGAACATCCAAGCCTT...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTGTCCAAATCAGCTCCTaGATCTCTCCGCATCTTTAT | + |
Preference number: 4 (lower is better) Translates to: NIKVGPQARHSIQDTGERVQISS*ISPHLY Trigger: ATAAAGATGCGGAGAGATGCAGGAGCTGATTTGGAC...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | GTCAGTCATCTGGGAAGCTATGATCCAAAACAACCTGAGATTTCTTTGGAAGCCGAAGATGTAAATACCTaGCATTTGTATACACTCTCA | + |
Preference number: 4 (lower is better) Translates to: VSHLGSYDPKQPEISLEAEDVNT*HLYTLS Trigger: TGAGAGTGTATACAAATGGCAGGTATTTACATCTTC...GGCTTCCAAAGAAATCTCAGGTTGTTTTGGATCATAGCTTCCCAGATGACTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | CAGCAACAGCAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTTTGTTGGCTGCTTGGTaGAATGTTCTCCTTAGCCAT | + |
Preference number: 4 (lower is better) Translates to: QQQQVYKTSLSELFLHNALLAAW*NVLLSH Trigger: ATGGCTAAGGAGAACATTCCACCAAGCAGCCAACAA...AGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTGCTGTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGACTGTTGTTGGCTGCTTaGTGGAATGTTCTCCTTAGC | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRLLLAA*WNVLLS Trigger: GCTAAGGAGAACATTCCACCAAGCAGCCAACAACAG...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCCTGTTGTTGGCTGCTTaGTGGAATGTTCTCCTTAGC | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSLLLAA*WNVLLS Trigger: GCTAAGGAGAACATTCCACCAAGCAGCCAACAACAG...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | CATAGTATTCAAGATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCATATGTTCTTGCATCTaGGTTATGGTAGGCATCTAT | + |
Preference number: 4 (lower is better) Translates to: HSIQDTGERSTVKGTTGSICSCI*VMVGIY Trigger: ATAGATGCCTACCATAACCCAGATGCAAGAACATAT...GGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATCTTGAATACTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | TGTGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTGTCAAATATATCCATTaGGTTCCTCTCTCTTTTCCT | + |
Preference number: 4 (lower is better) Translates to: CAADYCQNLVLLICSSCVVKYIH*VPLSFP Trigger: AGGAAAAGAGAGAGGAACCCAATGGATATATTTGAC...AACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CCA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTCATTATCAGTGCAGATaGTGTCCAAATCAGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: NIKVGPQARHSIQDTGERHYQCR*CPNQLL Trigger: CAGGAGCTGATTTGGACACCATCTGCACTGATAATG...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGATTACCCCTGAGAAACTaGTTGTATTCTCGGTTGCGT | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRLPLRN*LYSRLR Trigger: ACGCAACCGAGAATACAATCAGTTTCTCAGGGGTAA...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR TCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCTTACCCCTGAGAAACTaGTTGTATTCTCGGTTGCGT | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSLPLRN*LYSRLR Trigger: ACGCAACCGAGAATACAATCAGTTTCTCAGGGGTAA...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR TCA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCTTTATTTTCAGCAGCTaGGATCTGTGTGTTTGGCTC | + |
Preference number: 4 (lower is better) Translates to: ITNPFAPMECVTTDMKMSFIFSS*DLCVWL Trigger: GAGCCAAACACACAGATCTCAGCTGCTGAAAATAAA...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | ACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTCCTATGGAATGTGGTGGTCCATTACAGTaGACACTTTTATTTTCAGCA | + |
Preference number: 4 (lower is better) Translates to: TFNHGSWMITNPFAPMECGGPLQ*TLLFSA Trigger: TGCTGAAAATAAAAGTGTTCACTGTAATGGACCACC...ACATTCCATAGGAGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | TGTGTACACTCTAGCTCACCACCTCTTAATGGCAAGCACATTTTAATGCACATATGTTTGCAAAGGACCTaGGTTTTTATTTGCAGAATC | + |
Preference number: 4 (lower is better) Translates to: CVHSSSPPLNGKHILMHICLQRT*VFICRI Trigger: GATTCTGCAAATAAAAACTCAGGTCCTTTGCAAACA...TATGTGCATTAAAATGTGCTTGCCATTAAGAGGTGGTGAGCTAGAGTGTACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR TCA 90 bp | ATTGTCTTCAATAACAGGATATGTCTCACCATAAGCACCAATAAAAGCACTATCTATGATGGTGTCGACTaGAGGAGGTCTTTGGAGTTT | + |
Preference number: 4 (lower is better) Translates to: IVFNNRICLTISTNKSTIYDGVD*RRSLEF Trigger: AAACTCCAAAGACCTCCTTCAGTCGACACCATCATA...GATAGTGCTTTTATTGGTGCTTATGGTGAGACATATCCTGTTATTGAAGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR TCA 90 bp | TGTGTACACTCTAGCTCACCACCTCTTAATGGCAAGCACATTTTAATGCACATATTTCTCATTCTAACTTaGTCGACATTTACACTGGAG | + |
Preference number: 4 (lower is better) Translates to: CVHSSSPPLNGKHILMHIFLILT*STFTLE Trigger: CTCCAGTGTAAATGTCGATCAAGTTAGAATGAGAAA...TATGTGCATTAAAATGTGCTTGCCATTAAGAGGTGGTGAGCTAGAGTGTACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | TGTGTACACTCTAGCTCACCACCTCTTAATGGCAAGCACATTTTAATGCACATAGCCAGTTTCGCTTTTTaGTCTTCAATAAATTCATCC | + |
Preference number: 4 (lower is better) Translates to: CVHSSSPPLNGKHILMHIASFAF*SSINSS Trigger: GGATGAATTTATTGAAGAGCAAAAAGCGAAACTGGC...TATGTGCATTAAAATGTGCTTGCCATTAAGAGGTGGTGAGCTAGAGTGTACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | CAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTAACAGTGGCTTTTTCTGTGGATTCTaGCTTACCCCTGAGAAACTG | + |
Preference number: 4 (lower is better) Translates to: QVYKTSLSELFLHNANSGFFCGF*LTPEKL Trigger: CAGTTTCTCAGGGGTAAGGCAGAATCCACAGAAAAA...GCCACTGTTAGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | TTAACATCTAAGATTAGGATGCCTAGCAACCTAGTTTTAACTTACTGCGTAGGGGTTCTGCACCAGAAATaGCTACTTCTTCCTTTGTTT | + |
Preference number: 4 (lower is better) Translates to: LTSKIRMPSNLVLTYCVGVLHQK*LLLPLF Trigger: AAACAAAGGAAGAAGTAGGCATTTCTGGTGCAGAAC...CCCTACGCAGTAAGTTAAAACTAGGTTGCTAGGCATCCTAATCTTAGATGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAAAGGCTTGGATGTTCTaGACCAGAAATGCCTACTTC | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRKAWMF*TRNAYF Trigger: GAAGTAGGCATTTCTGGTGCAGAACATCCAAGCCTT...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCAAGGCTTGGATGTTCTaGACCAGAAATGCCTACTTC | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSKAWMF*TRNAYF Trigger: GAAGTAGGCATTTCTGGTGCAGAACATCCAAGCCTT...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | ACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTCCTATGGAATGTCTCTTCTTCTTCTGTTaGTCAGCTATCTGTTCTAGT | + |
Preference number: 4 (lower is better) Translates to: TFNHGSWMITNPFAPMECLFFFC*SAICSS Trigger: ACTAGAACAGATAGCTGAGCAACAGAAGAAGAAGAG...ACATTCCATAGGAGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | ATTGTCTTCAATAACAGGATATGTCTCACCATAAGCACCAATAAAAGCACTATCGTCCAAATCAGCTCCTaGATCTCTCCGCATCTTTAT | + |
Preference number: 4 (lower is better) Translates to: IVFNNRICLTISTNKSTIVQISS*ISPHLY Trigger: ATAAAGATGCGGAGAGATGCAGGAGCTGATTTGGAC...GATAGTGCTTTTATTGGTGCTTATGGTGAGACATATCCTGTTATTGAAGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCCATCTCCATGTACGGTaGATCACTTTCCAATTCTGC | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSHLHVR*ITFQFC Trigger: GCAGAATTGGAAAGTGATCCACCGTACATGGAGATG...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTACATCTCCATGTACGGTaGATCACTTTCCAATTCTGC | + |
Preference number: 4 (lower is better) Translates to: GAFPELQTIKIQLKETRVHLHVR*ITFQFC Trigger: GCAGAATTGGAAAGTGATCCACCGTACATGGAGATG...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAAACTCCCAGAGTAGATaGGTCTGTTTCACCAGTAGA | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRNSQSR*VCFTSR Trigger: TCTACTGGTGAAACAGACCCATCTACTCTGGGAGTT...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCAACTCCCAGAGTAGATaGGTCTGTTTCACCAGTAGA | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSNSQSR*VCFTSR Trigger: TCTACTGGTGAAACAGACCCATCTACTCTGGGAGTT...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAATAACCGCTCATCAATaGGAAGAGAAACTCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRITAHQ*EEKLPE Trigger: CTCTGGGAGTTTCTCTTCCCATTGATGAGCGGTTAT...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTAATAACCGCTCATCAATaGGAAGAGAAACTCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: GAFPELQTIKIQLKETRVITAHQ*EEKLPE Trigger: CTCTGGGAGTTTCTCTTCCCATTGATGAGCGGTTAT...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCATAACCGCTCATCAATaGGAAGAGAAACTCCCAGAG | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSITAHQ*EEKLPE Trigger: CTCTGGGAGTTTCTCTTCCCATTGATGAGCGGTTAT...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | GGATCTGAATCCATTGCTGCTTTAGAATTTAAATTCACATGCACAATTTGGGGGGTTTCAATCTTTCCTTaGCAGATAACCGCTCATCAA | + |
Preference number: 4 (lower is better) Translates to: GSESIAALEFKFTCTIWGVSIFP*QITAHQ Trigger: TTGATGAGCGGTTATCTGCCAAGGAAAGATTGAAAC...CCCCCAAATTGTGCATGTGAATTTAAATTCTAAAGCAGCAATGGATTCAGATCC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCCTGTGTAGAAGGTTTTaGCTTATCCTCAAAGACCAG | + |
Preference number: 4 (lower is better) Translates to: ITNPFAPMECVTTDMKMSLCRRF*LILKDQ Trigger: CTGGTCTTTGAGGATAAGCCAAAACCTTCTACACAG...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | ATTGTCTTCAATAACAGGATATGTCTCACCATAAGCACCAATAAAAGCACTATCCATTATCAGTGCAGATaGTGTCCAAATCAGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: IVFNNRICLTISTNKSTIHYQCR*CPNQLL Trigger: CAGGAGCTGATTTGGACACCATCTGCACTGATAATG...GATAGTGCTTTTATTGGTGCTTATGGTGAGACATATCCTGTTATTGAAGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CCA 90 bp | ATTGTCTTCAATAACAGGATATGTCTCACCATAAGCACCAATAAAAGCACTATCCTGAGGAATTTGAACTaGTTGCTTACCATTCTGCGC | + |
Preference number: 4 (lower is better) Translates to: IVFNNRICLTISTNKSTILRNLN*LLTILR Trigger: GCGCAGAATGGTAAGCAACCAGTTCAAATTCCTCAG...GATAGTGCTTTTATTGGTGCTTATGGTGAGACATATCCTGTTATTGAAGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR TCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAATTCTGCCTTACCCCTaGGAAACTGATTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRILPYP*ETDCIL Trigger: GAGAATACAATCAGTTTCTCAGGGGTAAGGCAGAAT...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR TCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCATTCTGCCTTACCCCTaGGAAACTGATTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSILPYP*ETDCIL Trigger: GAGAATACAATCAGTTTCTCAGGGGTAAGGCAGAAT...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR TCA 90 bp | CAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTCTTGCAATTTTGTTCTaGAGAGCAGGAACTACAGGA | + |
Preference number: 4 (lower is better) Translates to: QKNVTFNHGSWMITNPFALAILF*RAGTTG Trigger: TCCTGTAGTTCCTGCTCTTCAGAACAAAATTGCAAG...AGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | TTAACATCTAAGATTAGGATGCCTAGCAACCTAGTTTTAACTTACTGCGTAGGGGCCAGTTTCGCTTTTTaGTCTTCAATAAATTCATCC | + |
Preference number: 4 (lower is better) Translates to: LTSKIRMPSNLVLTYCVGASFAF*SSINSS Trigger: GGATGAATTTATTGAAGAGCAAAAAGCGAAACTGGC...CCCTACGCAGTAAGTTAAAACTAGGTTGCTAGGCATCCTAATCTTAGATGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGATTTTTCTGTGGATTCTaGCTTACCCCTGAGAAACTG | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRFFCGF*LTPEKL Trigger: CAGTTTCTCAGGGGTAAGGCAGAATCCACAGAAAAA...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | CAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTAACAGTGGCGTTCTGCACCAGAAATaGCTACTTCTTCCTTTGTTT | + |
Preference number: 4 (lower is better) Translates to: QVYKTSLSELFLHNANSGVLHQK*LLLPLF Trigger: AAACAAAGGAAGAAGTAGGCATTTCTGGTGCAGAAC...GCCACTGTTAGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCGGAGAGCTTTGTGTTTaGAAAGGACCTGAGTTTTTA | + |
Preference number: 4 (lower is better) Translates to: ITNPFAPMECVTTDMKMSGELCV*KGPEFL Trigger: TAAAAACTCAGGTCCTTTGCAAACACAAAGCTCTCC...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTACTGAAGGAGGTCTTTaGAGTTTGCTTGCAATTTTG | + |
Preference number: 4 (lower is better) Translates to: NIKVGPQARHSIQDTGERTEGGL*SLLAIL Trigger: CAAAATTGCAAGCAAACTCCAAAGACCTCCTTCAGT...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | TTTGAAGAAACAGTGTTCAGAATGGAGATCATAAGAACCAGCCTTAAGTACTCTGCCAGTTTCGCTTTTTaGTCTTCAATAAATTCATCC | + |
Preference number: 4 (lower is better) Translates to: FEETVFRMEIIRTSLKYSASFAF*SSINSS Trigger: GGATGAATTTATTGAAGAGCAAAAAGCGAAACTGGC...AGAGTACTTAAGGCTGGTTCTTATGATCTCCATTCTGAACACTGTTTCTTCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAGTTCTGCACCAGAAATaGCTACTTCTTCCTTTGTTT | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRVLHQK*LLLPLF Trigger: AAACAAAGGAAGAAGTAGGCATTTCTGGTGCAGAAC...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCGTTCTGCACCAGAAATaGCTACTTCTTCCTTTGTTT | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSVLHQK*LLLPLF Trigger: AAACAAAGGAAGAAGTAGGCATTTCTGGTGCAGAAC...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | TTAACATCTAAGATTAGGATGCCTAGCAACCTAGTTTTAACTTACTGCGTAGGGGAAGATGTAAATACCTaGCATTTGTATACACTCTCA | + |
Preference number: 4 (lower is better) Translates to: LTSKIRMPSNLVLTYCVGEDVNT*HLYTLS Trigger: TGAGAGTGTATACAAATGGCAGGTATTTACATCTTC...CCCTACGCAGTAAGTTAAAACTAGGTTGCTAGGCATCCTAATCTTAGATGTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | CAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTGTTTCAATCTTTCCTTaGCAGATAACCGCTCATCAA | + |
Preference number: 4 (lower is better) Translates to: QKNVTFNHGSWMITNPFAVSIFP*QITAHQ Trigger: TTGATGAGCGGTTATCTGCCAAGGAAAGATTGAAAC...AGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCGTTTCAATCTTTCCTTaGCAGATAACCGCTCATCAA | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSVSIFP*QITAHQ Trigger: TTGATGAGCGGTTATCTGCCAAGGAAAGATTGAAAC...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAGCCAGTTTCGCTTTTTaGTCTTCAATAAATTCATCC | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRASFAF*SSINSS Trigger: GGATGAATTTATTGAAGAGCAAAAAGCGAAACTGGC...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCGCCAGTTTCGCTTTTTaGTCTTCAATAAATTCATCC | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSASFAF*SSINSS Trigger: GGATGAATTTATTGAAGAGCAAAAAGCGAAACTGGC...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CCA 90 bp | CAGCAACAGCAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTCATAGTATACAATATTaGGATCCAGTGTATTTCTGG | + |
Preference number: 4 (lower is better) Translates to: QQQQVYKTSLSELFLHNAHSIQY*DPVYFW Trigger: CCAGAAATACACTGGATCCCAATATTGTATACTATG...AGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTGCTGTTGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CCA 90 bp | AGGCAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGTCAAATATATCCATTaGGTTCCTCTCTCTTTTCCT | + |
Preference number: 4 (lower is better) Translates to: RQKNVTFNHGSWMITNPFVKYIH*VPLSFP Trigger: AGGAAAAGAGAGAGGAACCCAATGGATATATTTGAC...AAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTGCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | CAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTGATTGTATTCTCGGTTaGGTTCAAGTTTCAATCTTT | + |
Preference number: 4 (lower is better) Translates to: QKNVTFNHGSWMITNPFADCILG*VQVSIF Trigger: AAAGATTGAAACTTGAACGCAACCGAGAATACAATC...AGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAGATTGTATTCTCGGTTaGGTTCAAGTTTCAATCTTT | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRDCILG*VQVSIF Trigger: AAAGATTGAAACTTGAACGCAACCGAGAATACAATC...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCGATTGTATTCTCGGTTaGGTTCAAGTTTCAATCTTT | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSDCILG*VQVSIF Trigger: AAAGATTGAAACTTGAACGCAACCGAGAATACAATC...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTAGATTGTATTCTCGGTTaGGTTCAAGTTTCAATCTTT | + |
Preference number: 4 (lower is better) Translates to: GAFPELQTIKIQLKETRVDCILG*VQVSIF Trigger: AAAGATTGAAACTTGAACGCAACCGAGAATACAATC...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | CAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTTGTTCTAGTAGTTCTTaGCTATATTTCTCCTTCCTT | + |
Preference number: 4 (lower is better) Translates to: QKNVTFNHGSWMITNPFACSSSS*LYFSFL Trigger: AAGGAAGGAGAAATATAGGCAAGAACTACTAGAACA...AGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR GCA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAGAAGATGTAAATACCTaGCATTTGTATACACTCTCA | + |
Preference number: 4 (lower is better) Translates to: VKLRQEIPSLRMFPFTFREDVNT*HLYTLS Trigger: TGAGAGTGTATACAAATGGCAGGTATTTACATCTTC...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR GCA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCGAAGATGTAAATACCTaGCATTTGTATACACTCTCA | + |
Preference number: 4 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSEDVNT*HLYTLS Trigger: TGAGAGTGTATACAAATGGCAGGTATTTACATCTTC...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS CCA 90 bp | CAAGGAGCGGAGGCGGGGGTGGATTCAGAGGCACAGGCAGAACCCTaGGATGCGCCAGTTCACCAAGGGTGCTGCCGAGTCCACTGTGCA | + |
Preference number: 5 (lower is better) Translates to: QGAEAGVDSEAQAEP*DAPVHQGCCRVHCA Trigger: TGCACAGTGGACTCGGCAGCACCCTTGGTGAACTGGCGCATCCCAGGGTTCTGCCTGTGCCTCTGAATCCACCCCCGCCTCCGCTCCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 90 bp | GAGGCACAGGCAGAACCCTGGGATGCGCCAGTTCACCAAGGGTGCTaGCGAGTCCACTGTGCAAGTCTTCATTGTGAGAAGGGGCGGAAT | + |
Preference number: 5 (lower is better) Translates to: EAQAEPWDAPVHQGC*RVHCASLHCEKGRN Trigger: ATTCCGCCCCTTCTCACAATGAAGACTTGCACAGTGGACTCGGCAGCACCCTTGGTGAACTGGCGCATCCCAGGGTTCTGCCTGTGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS TCA 90 bp | CTGTTCTTCATTCAGATGCTCTGCCATGAACCGTTTCAGACTTTCTaGAGTGCCAGGGCGGAGCCAGGGCTCAGTTGCCGCAGAGTTGCG | + |
Preference number: 5 (lower is better) Translates to: LFFIQMLCHEPFQTF*SARAEPGLSCRRVA Trigger: CGCAACTCTGCGGCAACTGAGCCCTGGCTCCGCCCTGGCACTTCAGAAAGTCTGAAACGGTTCATGGCAGAGCATCTGAATGAAGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS TCA 90 bp | GCTTCCCAGGCCCCTTATGCTGTTCTTCATTCAGATGCTCTGCCATaGACCGTTTCAGACTTTCTGAAGTGCCAGGGCGGAGCCAGGGCT | + |
Preference number: 5 (lower is better) Translates to: ASQAPYAVLHSDALP*TVSDFLKCQGGARA Trigger: AGCCCTGGCTCCGCCCTGGCACTTCAGAAAGTCTGAAACGGTTCATGGCAGAGCATCTGAATGAAGAACAGCATAAGGGGCCTGGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 90 bp | AACGTGCCTGGCTTCCCAGGCCCCTTATGCTGTTCTTCATTCAGATaGTCTGCCATGAACCGTTTCAGACTTTCTGAAGTGCCAGGGCGG | + |
Preference number: 5 (lower is better) Translates to: NVPGFPGPLCCSSFR*SAMNRFRLSEVPGR Trigger: CCGCCCTGGCACTTCAGAAAGTCTGAAACGGTTCATGGCAGAGCATCTGAATGAAGAACAGCATAAGGGGCCTGGGAAGCCAGGCACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 90 bp | GAGAGGCCCTGCCAAGTAAACGTGCCTGGCTTCCCAGGCCCCTTATaGTGTTCTTCATTCAGATGCTCTGCCATGAACCGTTTCAGACTT | + |
Preference number: 5 (lower is better) Translates to: ERPCQVNVPGFPGPL*CSSFRCSAMNRFRL Trigger: AAGTCTGAAACGGTTCATGGCAGAGCATCTGAATGAAGAACAGCATAAGGGGCCTGGGAAGCCAGGCACGTTTACTTGGCAGGGCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS TCA 90 bp | TGTGCATCCTATTCAAATCAGTTATCAGATTTCCTTTGGCGTCTCTaGGAGGAGCACCACCTCCGCCCTTCCCCCAGGGGTTGTAGATCC | + |
Preference number: 5 (lower is better) Translates to: CASYSNQLSDFLWRL*EEHHLRPSPRGCRS Trigger: GGATCTACAACCCCTGGGGGAAGGGCGGAGGTGGTGCTCCTCTCAGAGACGCCAAAGGAAATCTGATAACTGATTTGAATAGGATGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS GCA 90 bp | CTTAATTCAATTTCACCATCTAGCTGTCGGTACAGGCCCTCCTCTTaGCGGCTTAGCCAGGGTCCCTCTGAATGTGTGTATGCAGTCTGT | + |
Preference number: 5 (lower is better) Translates to: LNSISPSSCRYRPSS*RLSQGPSECVYAVC Trigger: ACAGACTGCATACACACATTCAGAGGGACCCTGGCTAAGCCGGCAAGAGGAGGGCCTGTACCGACAGCTAGATGGTGAAATTGAATTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000071087.12 ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 ENSMUST00000186294.7 |
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CDS GCA 90 bp | TGTTTGGCTCTTCTGGGACATCATCCCCATCCACATACCCTCGTCTaGTCCCATGCGGCCTGCCATTTGTATACACTCTCAAAAGTCTTC | + |
Preference number: 5 (lower is better) Translates to: CLALLGHHPHPHTLV*SHAACHLYTLSKVF Trigger: GAAGACTTTTGAGAGTGTATACAAATGGCAGGCCGCATGGGAGCAGACGAGGGTATGTGGATGGGGATGATGTCCCAGAAGAGCCAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS-3UTR CAA 90 bp | AGTATTCACAGCTGGCGGTGCTACCTGGTGAGTGACAGGGGCAGAGACATGAGGTTCTCCTTCCTTCTCTaGGTAAGTTCTCGATCTTCA | + |
Preference number: 5 (lower is better) Translates to: SIHSWRCYLVSDRGRDMRFSFLL*VSSRSS Trigger: TGAAGATCGAGAACTTACCAAGAGAAGGAAGGAGAA...CCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGTGAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188449.7 |
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CDS-3UTR CAA 90 bp | CATAGTATTCAAGATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGGAGCCAGGGCTCAGTaGCCGCAGAGTTGCGTCCAT | + |
Preference number: 5 (lower is better) Translates to: HSIQDTGERSTVKGTTGSGARAQ*PQSCVH Trigger: ATGGACGCAACTCTGCGGCAACTGAGCCCTGGCTCC...GGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATCTTGAATACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | TGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTCCCTCTTCTGCACGGAGTaGGTTCTTCCTTGCAGGCAC | + |
Preference number: 5 (lower is better) Translates to: CSRLLSKSSPFNLFLLRSLFCTE*VLPCRH Trigger: GTGCCTGCAAGGAAGAACCAACTCCGTGCAGAAGAG...GGAACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS GCA 90 bp | TCTTCTGGGACATCATCCCCATCCACATACCCTCGTCTGCTCCCATaGGGCCTGCCATTTGTATACACTCTCAAAAGTCTTCTATCAAAA | + |
Preference number: 5 (lower is better) Translates to: SSGTSSPSTYPRLLP*GLPFVYTLKSLLSK Trigger: TTTTGATAGAAGACTTTTGAGAGTGTATACAAATGGCAGGCCGCATGGGAGCAGACGAGGGTATGTGGATGGGGATGATGTCCCAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CCA 90 bp | TGTCATCTCTGGGCATTCTGCGCCCTTGTGCATTATCAGTGCAGATaGTGTCCAAATCAGCTCCTGCATCTCTCCGCATCTTTATTCTAT | + |
Preference number: 5 (lower is better) Translates to: CHLWAFCALVHYQCR*CPNQLLHLSASLFY Trigger: ATAGAATAAAGATGCGGAGAGATGCAGGAGCTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGCCCAGAGATGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS-3UTR CAA 90 bp | CATAGTATTCAAGATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGGAGTTGGTTCTTCCTaGCAGGCACTGGAGGAGACT | + |
Preference number: 5 (lower is better) Translates to: HSIQDTGERSTVKGTTGSGVGSS*QALEET Trigger: AGTCTCCTCCAGTGCCTGCAAGGAAGAACCAACTCC...GGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATCTTGAATACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | CATAGTATTCAAGATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCCTCTTCTGCACGGAGTaGGTTCTTCCTTGCAGGCAC | + |
Preference number: 5 (lower is better) Translates to: HSIQDTGERSTVKGTTGSLFCTE*VLPCRH Trigger: GTGCCTGCAAGGAAGAACCAACTCCGTGCAGAAGAG...GGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATCTTGAATACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS TCA 90 bp | TCCATCATCACTCAGGTGTCTCATGATGTCATCAGGATCAACCAGTaGACCCTCATCATCTGTGTTAGTGGGTTTCTTCTGCTGCTCAGT | + |
Preference number: 5 (lower is better) Translates to: SIITQVSHDVIRINQ*TLIICVSGFLLLLS Trigger: ACTGAGCAGCAGAAGAAACCCACTAACACAGATGATGAGGGTTCACTGGTTGATCCTGATGACATCATGAGACACCTGAGTGATGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 90 bp | CTAACTGAGGAATTTGAACTGGTTGCTTACCATTCTGCGCCCTTGTaGATTATCAGTGCAGATGGTGTCCAAATCAGCTCCTGCATCTCT | + |
Preference number: 5 (lower is better) Translates to: LTEEFELVAYHSAPL*IISADGVQISSCIS Trigger: AGAGATGCAGGAGCTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGGTAAGCAACCAGTTCAAATTCCTCAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS CCA 90 bp | CTTGGTAAGTTCTCGATCTTCACCTCCAAAGAGCATGCCTGCAAATaGACTTGTGATATCGAGATCAGCAGATCTGGGTGGTCCATTACA | + |
Preference number: 5 (lower is better) Translates to: LGKFSIFTSKEHACK*TCDIEISRSGWSIT Trigger: TGTAATGGACCACCCAGATCTGCTGATCTCGATATCACAAGTCCATTTGCAGGCATGCTCTTTGGAGGTGAAGATCGAGAACTTACCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000188449.7 |
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CDS CCA 90 bp | ACTGGTTGCTTACCATTCTGCGCCCTTGTGCATTATCAGTGCAGATaGTGTCCAAATCAGCTCCTGCATCTCTCCGCATCTTTATTCTAT | + |
Preference number: 5 (lower is better) Translates to: TGCLPFCALVHYQCR*CPNQLLHLSASLFY Trigger: ATAGAATAAAGATGCGGAGAGATGCAGGAGCTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGGTAAGCAACCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CAA 90 bp | TCTTTGGAAGCCACTGGCAACAGGAATCCAGACTGTGGATCTGAATCCATTGCTCTTTCCAATTCTGCTTaGTCTTTGGCCAGTTTCGCT | + |
Preference number: 5 (lower is better) Translates to: SLEATGNRNPDCGSESIALSNSA*SLASFA Trigger: AGCGAAACTGGCCAAAGACAAAGCAGAATTGGAAAG...AGCAATGGATTCAGATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | CATAGTATTCAAGATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCATTCCTAAGGGTCCCTaGGGCTGTTGTTGGCTGCTT | + |
Preference number: 5 (lower is better) Translates to: HSIQDTGERSTVKGTTGSIPKGP*GCCWLL Trigger: AAGCAGCCAACAACAGCCCAAGGGACCCTTAGGAAT...GGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATCTTGAATACTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | GATACAGGTGAACGTTCCACTGTAAAAGGCACTACTGGATCCGAGAGGGTTTATCTTTCCAATTCTGCTTaGTCTTTGGCCAGTTTCGCT | + |
Preference number: 5 (lower is better) Translates to: DTGERSTVKGTTGSERVYLSNSA*SLASFA Trigger: AGCGAAACTGGCCAAAGACAAAGCAGAATTGGAAAG...ATAAACCCTCTCGGATCCAGTAGTGCCTTTTACAGTGGAACGTTCACCTGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | TCTTTGGAAGCCACTGGCAACAGGAATCCAGACTGTGGATCTGAATCCATTGCTAGTTTCAATCTTTCCTaGGCAGATAACCGCTCATCA | + |
Preference number: 5 (lower is better) Translates to: SLEATGNRNPDCGSESIASFNLS*ADNRSS Trigger: TGATGAGCGGTTATCTGCCAAGGAAAGATTGAAACT...AGCAATGGATTCAGATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | CAGCAACAGCAAGTATATAAAACAAGTCTCTCTGAATTGTTTCTCCACAATGCTACTCTTGCTGAATCCTaGCCCTCTGCTCCGCAAGCC | + |
Preference number: 5 (lower is better) Translates to: QQQQVYKTSLSELFLHNATLAES*PSAPQA Trigger: GGCTTGCGGAGCAGAGGGCAAGGATTCAGCAAGAGT...AGCATTGTGGAGAAACAATTCAGAGAGACTTGTTTTATATACTTGCTGTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | TGTGTACACTCTAGCTCACCACCTCTTAATGGCAAGCACATTTTAATGCACATATCTTCTGACAGGGGCTaGTACCCGATGTCTAGCCAT | + |
Preference number: 5 (lower is better) Translates to: CVHSSSPPLNGKHILMHISSDRG*YPMSSH Trigger: ATGGCTAGACATCGGGTACAAGCCCCTGTCAGAAGA...TATGTGCATTAAAATGTGCTTGCCATTAAGAGGTGGTGAGCTAGAGTGTACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS TCA 90 bp | GGACTTGTGATATCGAGATCAGCAGATCTGGGTGGTCCATTACAGTaGACACTTTTATTTTCAGCAGCTGAGATCTGTGTGTTTGGCTCT | + |
Preference number: 5 (lower is better) Translates to: GLVISRSADLGGPLQ*TLLFSAAEICVFGS Trigger: AGAGCCAAACACACAGATCTCAGCTGCTGAAAATAAAAGTGTTCACTGTAATGGACCACCCAGATCTGCTGATCTCGATATCACAAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS-3UTR CAA 90 bp | TTAACATCTAAGATTAGGATGCCTAGCAACCTAGTTTTAACTTACTGCGTAGGGATTCCTAAGGGTCCCTaGGGCTGTTGTTGGCTGCTT | + |
Preference number: 5 (lower is better) Translates to: LTSKIRMPSNLVLTYCVGIPKGP*GCCWLL Trigger: AAGCAGCCAACAACAGCCCAAGGGACCCTTAGGAAT...CCCTACGCAGTAAGTTAAAACTAGGTTGCTAGGCATCCTAATCTTAGATGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | TCTTTGGAAGCCACTGGCAACAGGAATCCAGACTGTGGATCTGAATCCATTGCTTACTTCTTCCTTTGTTaGTTTAAGCGGTCTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: SLEATGNRNPDCGSESIAYFFLC*FKRSSA Trigger: AGCAGAAGACCGCTTAAACAAACAAAGGAAGAAGTA...AGCAATGGATTCAGATCCACAGTCTGGATTCCTGTTGCCAGTGGCTTCCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | GCTAGTAACAGTGTATTGTTTCACAGTGCTGTGTACACTCTAGCTCACCACCTCTTCTCCTTCCTTCTCTaGGTAAGTTCTCGATCTTCA | + |
Preference number: 5 (lower is better) Translates to: ASNSVLFHSAVYTLAHHLFSFLL*VSSRSS Trigger: TGAAGATCGAGAACTTACCAAGAGAAGGAAGGAGAA...GAGGTGGTGAGCTAGAGTGTACACAGCACTGTGAAACAATACACTGTTACTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | TGTGTACACTCTAGCTCACCACCTCTTAATGGCAAGCACATTTTAATGCACATACTCCTGCAAAGCTTCTaGGTAAGACTGAAGCGACTG | + |
Preference number: 5 (lower is better) Translates to: CVHSSSPPLNGKHILMHILLQSF*VRLKRL Trigger: CAGTCGCTTCAGTCTTACCAAGAAGCTTTGCAGGAG...TATGTGCATTAAAATGTGCTTGCCATTAAGAGGTGGTGAGCTAGAGTGTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS TCA 90 bp | ACCTGTCTGACTTTTTCTGTGGATTCTGCCTTACCCCTGAGAAACTaGTTGTATTCTCGGTTGCGTTCAAGTTTCAATCTTTCCTTGGCA | + |
Preference number: 5 (lower is better) Translates to: TCLTFSVDSALPLRN*LYSRLRSSFNLSLA Trigger: TGCCAAGGAAAGATTGAAACTTGAACGCAACCGAGAATACAATCAGTTTCTCAGGGGTAAGGCAGAATCCACAGAAAAAGTCAGACAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000071087.12 ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 ENSMUST00000149214.3 ENSMUST00000186294.7 |
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CDS TCA 90 bp | AAGCGACTGTGTAGAAGGTTTTGGCTTATCCTCAAAGACCAGTCCTaGATTCCTGAGTCCATCACTAAGAACTTTCTGTTCATTCTGTCC | + |
Preference number: 5 (lower is better) Translates to: KRLCRRFWLILKDQS*IPESITKNFLFILS Trigger: GGACAGAATGAACAGAAAGTTCTTAGTGATGGACTCAGGAATTCAGGACTGGTCTTTGAGGATAAGCCAAAACCTTCTACACAGTCGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 90 bp | CGCCTTTCCCTTCATCTCCATGTACGGTGGATCACTTTCCAATTCTaGTTTGTCTTTGGCCAGTTTCGCTTTTTGCTCTTCAATAAATTC | + |
Preference number: 5 (lower is better) Translates to: RLSLHLHVRWITFQF*FVFGQFRFLLFNKF Trigger: GAATTTATTGAAGAGCAAAAAGCGAAACTGGCCAAAGACAAAGCAGAATTGGAAAGTGATCCACCGTACATGGAGATGAAGGGAAAGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000071087.12 ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 ENSMUST00000155974.8 ENSMUST00000191012.7 |
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CDS-3UTR CAA 90 bp | GTCAGTCATCTGGGAAGCTATGATCCAAAACAACCTGAGATTTCTTTGGAAGCCAGTTTCAATCTTTCCTaGGCAGATAACCGCTCATCA | + |
Preference number: 5 (lower is better) Translates to: VSHLGSYDPKQPEISLEASFNLS*ADNRSS Trigger: TGATGAGCGGTTATCTGCCAAGGAAAGATTGAAACT...GGCTTCCAAAGAAATCTCAGGTTGTTTTGGATCATAGCTTCCCAGATGACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | GCTAGTAACAGTGTATTGTTTCACAGTGCTGTGTACACTCTAGCTCACCACCTCTATCTTCATATGTTCTaGCATCTGGGTTATGGTAGG | + |
Preference number: 5 (lower is better) Translates to: ASNSVLFHSAVYTLAHHLYLHMF*HLGYGR Trigger: CCTACCATAACCCAGATGCAAGAACATATGAAGATA...GAGGTGGTGAGCTAGAGTGTACACAGCACTGTGAAACAATACACTGTTACTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | ATTGTCTTCAATAACAGGATATGTCTCACCATAAGCACCAATAAAAGCACTATCGGAGTTGGTTCTTCCTaGCAGGCACTGGAGGAGACT | + |
Preference number: 5 (lower is better) Translates to: IVFNNRICLTISTNKSTIGVGSS*QALEET Trigger: AGTCTCCTCCAGTGCCTGCAAGGAAGAACCAACTCC...GATAGTGCTTTTATTGGTGCTTATGGTGAGACATATCCTGTTATTGAAGACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CAA 90 bp | AGGCAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTTCCCTTGGGCTGTTGTaGGCTGCTTGGTGGAATGTT | + |
Preference number: 5 (lower is better) Translates to: RQKNVTFNHGSWMITNPFSLGLL*AAWWNV Trigger: AACATTCCACCAAGCAGCCAACAACAGCCCAAGGGA...AAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAATTCCTAAGGGTCCCTaGGGCTGTTGTTGGCTGCTT | + |
Preference number: 5 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRIPKGP*GCCWLL Trigger: AAGCAGCCAACAACAGCCCAAGGGACCCTTAGGAAT...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | TCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCAGCTTGTTGTTATCAGATTTCCTTaGGCGTCTCTGAGAGGAGCA | + |
Preference number: 5 (lower is better) Translates to: SLCSYGMCNYRYENEQLVVIRFP*ASLRGA Trigger: TGCTCCTCTCAGAGACGCCAAAGGAAATCTGATAAC...AACAAGCTGCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | AGGCAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTCTCCTCCTCATACTCTaGCTGAATCCTTGCCCTCTG | + |
Preference number: 5 (lower is better) Translates to: RQKNVTFNHGSWMITNPFLLLIL*LNPCPL Trigger: CAGAGGGCAAGGATTCAGCAAGAGTATGAGGAGGAG...AAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | ATTGTCTTCAATAACAGGATATGTCTCACCATAAGCACCAATAAAAGCACTATCTCTTCTGACAGGGGCTaGTACCCGATGTCTAGCCAT | + |
Preference number: 5 (lower is better) Translates to: IVFNNRICLTISTNKSTISSDRG*YPMSSH Trigger: ATGGCTAGACATCGGGTACAAGCCCCTGTCAGAAGA...GATAGTGCTTTTATTGGTGCTTATGGTGAGACATATCCTGTTATTGAAGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CAA 90 bp | TGTGCAGCCGACTACTGTCAAAATCTAGTCCTTTTAATTTGTTCCTCCTGCGTTTGTCAAATATATCCATaGGGTTCCTCTCTCTTTTCC | + |
Preference number: 5 (lower is better) Translates to: CAADYCQNLVLLICSSCVCQIYP*GSSLFS Trigger: GGAAAAGAGAGAGGAACCCAATGGATATATTTGACA...AACGCAGGAGGAACAAATTAAAAGGACTAGATTTTGACAGTAGTCGGCTGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS-3UTR CAA 90 bp | CAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTCATGCGGCCTGCCATTaGTATACACTCTCAAAAGTC | + |
Preference number: 5 (lower is better) Translates to: QKNVTFNHGSWMITNPFAHAACH*YTLSKV Trigger: GACTTTTGAGAGTGTATACAAATGGCAGGCCGCATG...AGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTTTCATTTTTCAACCTTaGCTCCTCCTCCTTCTCCCT | + |
Preference number: 5 (lower is better) Translates to: NIKVGPQARHSIQDTGERFIFQP*LLLLLP Trigger: AGGGAGAAGGAGGAGGAGCAAAGGTTGAAAAATGAA...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTGGTGGAGGGAAGGCATaGTCTTCAATAACAGGATAT | + |
Preference number: 5 (lower is better) Translates to: NIKVGPQARHSIQDTGERGGGKA*SSITGY Trigger: ATATCCTGTTATTGAAGACAATGCCTTCCCTCCACC...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | ATTGTCTTCAATAACAGGATATGTCTCACCATAAGCACCAATAAAAGCACTATCAGGAATTTGAACTGGTaGCTTACCATTCTGCGCCCT | + |
Preference number: 5 (lower is better) Translates to: IVFNNRICLTISTNKSTIRNLNW*LTILRP Trigger: AGGGCGCAGAATGGTAAGCAACCAGTTCAAATTCCT...GATAGTGCTTTTATTGGTGCTTATGGTGAGACATATCCTGTTATTGAAGACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS CCA 90 bp | TCATTCCTGAACCATAGTATACAATATTGGGATCCAGTGTATTTCTaGCACCGTAAAAATAGTACGCATCATCGTAAGGAGTTCGATAGT | + |
Preference number: 5 (lower is better) Translates to: SFLNHSIQYWDPVYF*HRKNSTHHRKEFDS Trigger: ACTATCGAACTCCTTACGATGATGCGTACTATTTTTACGGTGCCAGAAATACACTGGATCCCAATATTGTATACTATGGTTCAGGAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS-3UTR CAA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGACTTTCCAATTCTGCTTaGTCTTTGGCCAGTTTCGCT | + |
Preference number: 5 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRLSNSA*SLASFA Trigger: AGCGAAACTGGCCAAAGACAAAGCAGAATTGGAAAG...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCCTTTCCAATTCTGCTTaGTCTTTGGCCAGTTTCGCT | + |
Preference number: 5 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSLSNSA*SLASFA Trigger: AGCGAAACTGGCCAAAGACAAAGCAGAATTGGAAAG...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCGTTCTTTCTTCCTTCTaGCTTCTCTTTCCCGAATCT | + |
Preference number: 5 (lower is better) Translates to: ITNPFAPMECVTTDMKMSVLSSF*LLFPES Trigger: AGATTCGGGAAAGAGAAGCAAGAAGGAAGAAAGAAC...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS GCA 90 bp | ATTTTGGTCTATAGATACAACAGCCCTTTTATCTTCATATGTTCTTaGATCTGGGTTATGGTAGGCATCTATATTCTGTCTGTGCATCCT | + |
Preference number: 5 (lower is better) Translates to: ILVYRYNSPFIFICS*IWVMVGIYILSVHP Trigger: AGGATGCACAGACAGAATATAGATGCCTACCATAACCCAGATGCAAGAACATATGAAGATAAAAGGGCTGTTGTATCTATAGACCAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS CCA 90 bp | GTCTATAGATACAACAGCCCTTTTATCTTCATATGTTCTTGCATCTaGGTTATGGTAGGCATCTATATTCTGTCTGTGCATCCTATTCAA | + |
Preference number: 5 (lower is better) Translates to: VYRYNSPFIFICSCI*VMVGIYILSVHPIQ Trigger: TTGAATAGGATGCACAGACAGAATATAGATGCCTACCATAACCCAGATGCAAGAACATATGAAGATAAAAGGGCTGTTGTATCTATAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | AGGCAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTAGTTTCAATCTTTCCTaGGCAGATAACCGCTCATCA | + |
Preference number: 5 (lower is better) Translates to: RQKNVTFNHGSWMITNPFSFNLS*ADNRSS Trigger: TGATGAGCGGTTATCTGCCAAGGAAAGATTGAAACT...AAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCAGTTTCAATCTTTCCTaGGCAGATAACCGCTCATCA | + |
Preference number: 5 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSSFNLS*ADNRSS Trigger: TGATGAGCGGTTATCTGCCAAGGAAAGATTGAAACT...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAAGTTTCAATCTTTCCTaGGCAGATAACCGCTCATCA | + |
Preference number: 5 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRSFNLS*ADNRSS Trigger: TGATGAGCGGTTATCTGCCAAGGAAAGATTGAAACT...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCTACTTCTTCCTTTGTTaGTTTAAGCGGTCTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: ITNPFAPMECVTTDMKMSYFFLC*FKRSSA Trigger: AGCAGAAGACCGCTTAAACAAACAAAGGAAGAAGTA...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | ATCACAAATCCCTTTGCTCCTATGGAATGTGTAACTACAGATATGAAAATGAGCCTAGGTTCTCAGCATTaGAAGTGGCTAAATTTTGGT | + |
Preference number: 5 (lower is better) Translates to: ITNPFAPMECVTTDMKMSLGSQH*KWLNFG Trigger: ACCAAAATTTAGCCACTTCAAATGCTGAGAACCTAG...GCTCATTTTCATATCTGTAGTTACACATTCCATAGGAGCAAAGGGATTTGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | AATATTAAAGTAGGGCCACAAGCAAGACATAGTATTCAAGATACAGGTGAACGTTGTCAAATATATCCATaGGGTTCCTCTCTCTTTTCC | + |
Preference number: 5 (lower is better) Translates to: NIKVGPQARHSIQDTGERCQIYP*GSSLFS Trigger: GGAAAAGAGAGAGGAACCCAATGGATATATTTGACA...ACGTTCACCTGTATCTTGAATACTATGTCTTGCTTGTGGCCCTACTTTAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | CAGAAAAATGTAACATTTAATCATGGCTCATGGATGATCACAAATCCCTTTGCTTCTAGTCCTTTTAATTaGTTCCTCCTGCGTTCCCTT | + |
Preference number: 5 (lower is better) Translates to: QKNVTFNHGSWMITNPFASSPFN*FLLRSL Trigger: AAGGGAACGCAGGAGGAACAAATTAAAAGGACTAGA...AGCAAAGGGATTTGTGATCATCCATGAGCCATGATTAAATGTTACATTTTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS-3UTR CAA 90 bp | TTAACATCTAAGATTAGGATGCCTAGCAACCTAGTTTTAACTTACTGCGTAGGGGTAAATACCTGCCATTaGTATACACTCTCAAAAGTC | + |
Preference number: 5 (lower is better) Translates to: LTSKIRMPSNLVLTYCVGVNTCH*YTLSKV Trigger: GACTTTTGAGAGTGTATACAAATGGCAGGTATTTAC...CCCTACGCAGTAAGTTAAAACTAGGTTGCTAGGCATCCTAATCTTAGATGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS GCA 90 bp | GTAATTCCAAATGCTAAATCTTTTTCTCGTCTCTTCTTCTTCTGTTaGTCAGCTATCTGTTCTAGTAGTTCTTGCCTATATTTCTCCTTC | + |
Preference number: 5 (lower is better) Translates to: VIPNAKSFSRLFFFC*SAICSSSSCLYFSF Trigger: GAAGGAGAAATATAGGCAAGAACTACTAGAACAGATAGCTGAGCAACAGAAGAAGAAGAGACGAGAAAAAGATTTAGCATTTGGAATTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000188449.7 |
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CDS-3UTR CAA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCTACTTCTTCCTTTGTTaGTTTAAGCGGTCTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSYFFLC*FKRSSA Trigger: AGCAGAAGACCGCTTAAACAAACAAAGGAAGAAGTA...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTATACTTCTTCCTTTGTTaGTTTAAGCGGTCTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: GAFPELQTIKIQLKETRVYFFLC*FKRSSA Trigger: AGCAGAAGACCGCTTAAACAAACAAAGGAAGAAGTA...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGATACTTCTTCCTTTGTTaGTTTAAGCGGTCTTCTGCT | + |
Preference number: 5 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRYFFLC*FKRSSA Trigger: AGCAGAAGACCGCTTAAACAAACAAAGGAAGAAGTA...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGATTTCTTTCTCTTTGCTaGTGTAATGCCCTGAGTAAG | + |
Preference number: 5 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRFLSLC*CNALSK Trigger: CTTACTCAGGGCATTACACAAGCAAAGAGAAAGAAA...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | AGAATGTTTCCATTCACTTTTAGATTAAGGGGATACACTTTACCACTTTCTAGCGTAAATACCTGCCATTaGTATACACTCTCAAAAGTC | + |
Preference number: 5 (lower is better) Translates to: RMFPFTFRLRGYTLPLSSVNTCH*YTLSKV Trigger: GACTTTTGAGAGTGTATACAAATGGCAGGTATTTAC...GCTAGAAAGTGGTAAAGTGTATCCCCTTAATCTAAAAGTGAATGGAAACATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | GGAGCATTTCCTGAACTACAAACAATTAAGATTCAGCTCAAAGAAACTAGAGTAGTAAATACCTGCCATTaGTATACACTCTCAAAAGTC | + |
Preference number: 5 (lower is better) Translates to: GAFPELQTIKIQLKETRVVNTCH*YTLSKV Trigger: GACTTTTGAGAGTGTATACAAATGGCAGGTATTTAC...TACTCTAGTTTCTTTGAGCTGAATCTTAATTGTTTGTAGTTCAGGAAATGCTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118263.8 ENSMUST00000122156.8 |
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CDS-3UTR CAA 90 bp | GTTAAGCTGAGACAAGAAATCCCCTCTTTAAGAATGTTTCCATTCACTTTTAGAGTAAATACCTGCCATTaGTATACACTCTCAAAAGTC | + |
Preference number: 5 (lower is better) Translates to: VKLRQEIPSLRMFPFTFRVNTCH*YTLSKV Trigger: GACTTTTGAGAGTGTATACAAATGGCAGGTATTTAC...TCTAAAAGTGAATGGAAACATTCTTAAAGAGGGGATTTCTTGTCTCAGCTTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 |
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CDS GCA 72 bp | ATCTCGTCGTCACTGTCCAGGTGCAGCAGCCGCCCCTaGAAACGCCTCTCCTCGCTCCGGAGCTGCTTCCTC | + |
Preference number: 6 (lower is better) Translates to: ISSSLSRCSSRP*KRLSSLRSCFL Trigger: GAGGAAGCAGCTCCGGAGCGAGGAGAGGCGTTTGCAGGGGCGGCTGCTGCACCTGGACAGTGACGACGAGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000187226.7 |
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CDS CCA 72 bp | GAGGCGGGGGTGGATTCAGAGGCACAGGCAGAACCCTaGGATGCGCCAGTTCACCAAGGGTGCTGCCGAGTC | + |
Preference number: 6 (lower is better) Translates to: EAGVDSEAQAEP*DAPVHQGCCRV Trigger: GACTCGGCAGCACCCTTGGTGAACTGGCGCATCCCAGGGTTCTGCCTGTGCCTCTGAATCCACCCCCGCCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CCA 72 bp | CACCCGCTCCCCGTTAGCCCTGCGGGCTCTTCTCTCTaGGACACCAGCGCTGCCAGAAAGGCTTGGATGTTC | + |
Preference number: 6 (lower is better) Translates to: HPLPVSPAGSSL*DTSAARKAWMF Trigger: GAACATCCAAGCCTTTCTGGCAGCGCTGGTGTCCCAGAGAGAAGAGCCCGCAGGGCTAACGGGGAGCGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000071087.12 ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 ENSMUST00000186294.7 |
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CDS CAA 72 bp | GTGCCAGGGCGGAGCCAGGGCTCAGTTGCCGCAGAGTaGCGTCCATCATCACTCAGGTGTCTCATGATGTCA | + |
Preference number: 6 (lower is better) Translates to: VPGRSQGSVAAE*RPSSLRCLMMS Trigger: TGACATCATGAGACACCTGAGTGATGATGGACGCAACTCTGCGGCAACTGAGCCCTGGCTCCGCCCTGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CAA 72 bp | GACTTTCTGAAGTGCCAGGGCGGAGCCAGGGCTCAGTaGCCGCAGAGTTGCGTCCATCATCACTCAGGTGTC | + |
Preference number: 6 (lower is better) Translates to: DFLKCQGGARAQ*PQSCVHHHSGV Trigger: GACACCTGAGTGATGATGGACGCAACTCTGCGGCAACTGAGCCCTGGCTCCGCCCTGGCACTTCAGAAAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | CAGGCAGAACCCTGGGATGCGCCAGTTCACCAAGGGTaGTGCCGAGTCCACTGTGCAAGTCTTCATTGTGAG | + |
Preference number: 6 (lower is better) Translates to: QAEPWDAPVHQG*CRVHCASLHCE Trigger: CTCACAATGAAGACTTGCACAGTGGACTCGGCAGCACCCTTGGTGAACTGGCGCATCCCAGGGTTCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CCA 72 bp | CAAGTCTTCATTGTGAGAAGGGGCGGAATGAACTGGTaGGACGGATGGGCTAGACGGGGCAGAGAAGGGAGG | + |
Preference number: 6 (lower is better) Translates to: QVFIVRRGGMNW*DGWARRGREGR Trigger: CCTCCCTTCTCTGCCCCGTCTAGCCCATCCGTCCCACCAGTTCATTCCGCCCCTTCTCACAATGAAGACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CCA 72 bp | GTGCAAGTCTTCATTGTGAGAAGGGGCGGAATGAACTaGTGGGACGGATGGGCTAGACGGGGCAGAGAAGGG | + |
Preference number: 6 (lower is better) Translates to: VQVFIVRRGGMN*WDGWARRGREG Trigger: CCCTTCTCTGCCCCGTCTAGCCCATCCGTCCCACCAGTTCATTCCGCCCCTTCTCACAATGAAGACTTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CCA 72 bp | CTCTTCTGCACGGAGTTGGTTCTTCCTTGCAGGCACTaGAGGAGACTGTGCCCGGGACATGGAGCTTTCGTG | + |
Preference number: 6 (lower is better) Translates to: LFCTELVLPCRH*RRLCPGHGAFV Trigger: CACGAAAGCTCCATGTCCCGGGCACAGTCTCCTCCAGTGCCTGCAAGGAAGAACCAACTCCGTGCAGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000187226.7 |
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CDS TCA 72 bp | ATTCAGATGCTCTGCCATGAACCGTTTCAGACTTTCTaGAGTGCCAGGGCGGAGCCAGGGCTCAGTTGCCGC | + |
Preference number: 6 (lower is better) Translates to: IQMLCHEPFQTF*SARAEPGLSCR Trigger: GCGGCAACTGAGCCCTGGCTCCGCCCTGGCACTTCAGAAAGTCTGAAACGGTTCATGGCAGAGCATCTGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | GCAGAACCCTGGGATGCGCCAGTTCACCAAGGGTGCTaGCGAGTCCACTGTGCAAGTCTTCATTGTGAGAAG | + |
Preference number: 6 (lower is better) Translates to: AEPWDAPVHQGC*RVHCASLHCEK Trigger: CTTCTCACAATGAAGACTTGCACAGTGGACTCGGCAGCACCCTTGGTGAACTGGCGCATCCCAGGGTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | CCGCTCCTGCTCCTCCTCATACTCTTGCTGAATCCTTaGCCTCTGCTCCGCAAGCCGCTTTTCTTCCTTCTC | + |
Preference number: 6 (lower is better) Translates to: PLLLLLILLLNP*PLLRKPLFFLL Trigger: GAGAAGGAAGAAAAGCGGCTTGCGGAGCAGAGGGCAAGGATTCAGCAAGAGTATGAGGAGGAGCAGGAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CCA 72 bp | GTACGCATCATCGTAAGGAGTTCGATAGTTAGAAGCTaGAGGGGCAAGGAGCGGAGGCGGGGGTGGATTCAG | + |
Preference number: 6 (lower is better) Translates to: VRIIVRSSIVRS*RGKERRRGWIQ Trigger: CTGAATCCACCCCCGCCTCCGCTCCTTGCCCCTCCAGCTTCTAACTATCGAACTCCTTACGATGATGCGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CAA 90 bp | CTTTCTGAAGTGCCAGGGCGGAGCCAGGGCTCAGTTGCCGCAGAGTaGCGTCCATCATCACTCAGGTGTCTCATGATGTCATCAGGATCA | + |
Preference number: 6 (lower is better) Translates to: LSEVPGRSQGSVAAE*RPSSLRCLMMSSGS Trigger: TGATCCTGATGACATCATGAGACACCTGAGTGATGATGGACGCAACTCTGCGGCAACTGAGCCCTGGCTCCGCCCTGGCACTTCAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CCA 72 bp | ATGTGCAGCAGAGAGGCCCTGCCAAGTAAACGTGCCTaGCTTCCCAGGCCCCTTATGCTGTTCTTCATTCAG | + |
Preference number: 6 (lower is better) Translates to: MCSREALPSKRA*LPRPLMLFFIQ Trigger: CTGAATGAAGAACAGCATAAGGGGCCTGGGAAGCCAGGCACGTTTACTTGGCAGGGCCTCTCTGCTGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | ATTTCACCATCTAGCTGTCGGTACAGGCCCTCCTCTTaGCGGCTTAGCCAGGGTCCCTCTGAATGTGTGTAT | + |
Preference number: 6 (lower is better) Translates to: ISPSSCRYRPSS*RLSQGPSECVY Trigger: ATACACACATTCAGAGGGACCCTGGCTAAGCCGGCAAGAGGAGGGCCTGTACCGACAGCTAGATGGTGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000071087.12 ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 ENSMUST00000149214.3 ENSMUST00000186294.7 |
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CDS GCA 72 bp | CATCTCTGGGCATTCTGCGCCCTTGTGCATTATCAGTaGAGATGGTGTCCAAATCAGCTCCTGCATCTCTCC | + |
Preference number: 6 (lower is better) Translates to: HLWAFCALVHYQ*RWCPNQLLHLS Trigger: GGAGAGATGCAGGAGCTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGCCCAGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | TGCCAAGTAAACGTGCCTGGCTTCCCAGGCCCCTTATaGTGTTCTTCATTCAGATGCTCTGCCATGAACCGT | + |
Preference number: 6 (lower is better) Translates to: CQVNVPGFPGPL*CSSFRCSAMNR Trigger: ACGGTTCATGGCAGAGCATCTGAATGAAGAACAGCATAAGGGGCCTGGGAAGCCAGGCACGTTTACTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS TCA 72 bp | GCCCCTTATGCTGTTCTTCATTCAGATGCTCTGCCATaGACCGTTTCAGACTTTCTGAAGTGCCAGGGCGGA | + |
Preference number: 6 (lower is better) Translates to: APYAVLHSDALP*TVSDFLKCQGG Trigger: TCCGCCCTGGCACTTCAGAAAGTCTGAAACGGTTCATGGCAGAGCATCTGAATGAAGAACAGCATAAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | GGTTGCTTACCATTCTGCGCCCTTGTGCATTATCAGTaGAGATGGTGTCCAAATCAGCTCCTGCATCTCTCC | + |
Preference number: 6 (lower is better) Translates to: GCLPFCALVHYQ*RWCPNQLLHLS Trigger: GGAGAGATGCAGGAGCTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGGTAAGCAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS CCA 72 bp | CAAATATATCCATTGGGTTCCTCTCTCTTTTCCTCATaGGGATCTCGTCGTCACTGTCCAGGTGCAGCAGCC | + |
Preference number: 6 (lower is better) Translates to: QIYPLGSSLFSS*GSRRHCPGAAA Trigger: GGCTGCTGCACCTGGACAGTGACGACGAGATCCCCATGAGGAAAAGAGAGAGGAACCCAATGGATATATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000187226.7 |
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CDS TCA 72 bp | CCGCAGAGTTGCGTCCATCATCACTCAGGTGTCTCATaGTGTCATCAGGATCAACCAGTGAACCCTCATCAT | + |
Preference number: 6 (lower is better) Translates to: PQSCVHHHSGVS*CHQDQPVNPHH Trigger: ATGATGAGGGTTCACTGGTTGATCCTGATGACATCATGAGACACCTGAGTGATGATGGACGCAACTCTGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | CCCCATCCACATACCCTCGTCTGCTCCCATGCGGCCTaGCATTTGTATACACTCTCAAAAGTCTTCTATCAA | + |
Preference number: 6 (lower is better) Translates to: PHPHTLVCSHAA*HLYTLSKVFYQ Trigger: TTGATAGAAGACTTTTGAGAGTGTATACAAATGGCAGGCCGCATGGGAGCAGACGAGGGTATGTGGATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | ACATCATCCCCATCCACATACCCTCGTCTGCTCCCATaGGGCCTGCCATTTGTATACACTCTCAAAAGTCTT | + |
Preference number: 6 (lower is better) Translates to: TSSPSTYPRLLP*GLPFVYTLKSL Trigger: AAGACTTTTGAGAGTGTATACAAATGGCAGGCCGCATGGGAGCAGACGAGGGTATGTGGATGGGGATGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | GGCTTCCCAGGCCCCTTATGCTGTTCTTCATTCAGATaGTCTGCCATGAACCGTTTCAGACTTTCTGAAGTG | + |
Preference number: 6 (lower is better) Translates to: GFPGPLCCSSFR*SAMNRFRLSEV Trigger: CACTTCAGAAAGTCTGAAACGGTTCATGGCAGAGCATCTGAATGAAGAACAGCATAAGGGGCCTGGGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CAA 72 bp | CTGTGCATCCTATTCAAATCAGTTATCAGATTTCCTTaGGCGTCTCTGAGAGGAGCACCACCTCCGCCCTTC | + |
Preference number: 6 (lower is better) Translates to: LCILFKSVIRFP*ASLRGAPPPPF Trigger: GAAGGGCGGAGGTGGTGCTCCTCTCAGAGACGCCAAAGGAAATCTGATAACTGATTTGAATAGGATGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |
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CDS GCA 72 bp | TGGGACACCAGCGCTGCCAGAAAGGCTTGGATGTTCTaGACCAGAAATGCCTACTTCTTCCTTTGTTTGTTT | + |
Preference number: 6 (lower is better) Translates to: WDTSAARKAWMF*TRNAYFFLCLF Trigger: AAACAAACAAAGGAAGAAGTAGGCATTTCTGGTGCAGAACATCCAAGCCTTTCTGGCAGCGCTGGTGTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000071087.12 ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 ENSMUST00000186294.7 |
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CDS CCA 72 bp | TTCTCGATCTTCACCTCCAAAGAGCATGCCTGCAAATaGACTTGTGATATCGAGATCAGCAGATCTGGGTGG | + |
Preference number: 6 (lower is better) Translates to: FSIFTSKEHACK*TCDIEISRSGW Trigger: CCACCCAGATCTGCTGATCTCGATATCACAAGTCCATTTGCAGGCATGCTCTTTGGAGGTGAAGATCGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000188449.7 |
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CDS CAA 90 bp | CTTCCTTCTTGCTTCTCTTTCCCGAATCTGCTCCTGCAAAGCTTCTaGGTAAGACTGAAGCGACTGTGTAGAAGGTTTTGGCTTATCCTC | + |
Preference number: 6 (lower is better) Translates to: LPSCFSFPNLLLQSF*VRLKRLCRRFWLIL Trigger: GAGGATAAGCCAAAACCTTCTACACAGTCGCTTCAGTCTTACCAAGAAGCTTTGCAGGAGCAGATTCGGGAAAGAGAAGCAAGAAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | GAATTTGAACTGGTTGCTTACCATTCTGCGCCCTTGTaGATTATCAGTGCAGATGGTGTCCAAATCAGCTCC | + |
Preference number: 6 (lower is better) Translates to: EFELVAYHSAPL*IISADGVQISS Trigger: GGAGCTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGGTAAGCAACCAGTTCAAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS CAA 72 bp | TGCTTCTCTTTCCCGAATCTGCTCCTGCAAAGCTTCTaGGTAAGACTGAAGCGACTGTGTAGAAGGTTTTGG | + |
Preference number: 6 (lower is better) Translates to: CFSFPNLLLQSF*VRLKRLCRRFW Trigger: CCAAAACCTTCTACACAGTCGCTTCAGTCTTACCAAGAAGCTTTGCAGGAGCAGATTCGGGAAAGAGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CAA 72 bp | GAGGAATTTGAACTGGTTGCTTACCATTCTGCGCCCTaGTGCATTATCAGTGCAGATGGTGTCCAAATCAGC | + |
Preference number: 6 (lower is better) Translates to: EEFELVAYHSAP*CIISADGVQIS Trigger: GCTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGGTAAGCAACCAGTTCAAATTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187226.7 |
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CDS TCA 72 bp | GAAGGAGGTCTTTGGAGTTTGCTTGCAATTTTGTTCTaGAGAGCAGGAACTACAGGAGAAGGCTGTCTCAAG | + |
Preference number: 6 (lower is better) Translates to: EGGLWSLLAILF*RAGTTGEGCLK Trigger: CTTGAGACAGCCTTCTCCTGTAGTTCCTGCTCTTCAGAACAAAATTGCAAGCAAACTCCAAAGACCTCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000187226.7 |
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CDS TCA 72 bp | ACTCAGGTGTCTCATGATGTCATCAGGATCAACCAGTaGACCCTCATCATCTGTGTTAGTGGGTTTCTTCTG | + |
Preference number: 6 (lower is better) Translates to: TQVSHDVIRINQ*TLIICVSGFLL Trigger: CAGAAGAAACCCACTAACACAGATGATGAGGGTTCACTGGTTGATCCTGATGACATCATGAGACACCTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CCA 72 bp | GTAAACTTAAGCCATATTCAATTCCTAAGGGTCCCTTaGGCTGTTGTTGGCTGCTTGGTGGAATGTTCTCCT | + |
Preference number: 6 (lower is better) Translates to: VNLSHIQFLRVP*AVVGCLVECSP Trigger: AGGAGAACATTCCACCAAGCAGCCAACAACAGCCCAAGGGACCCTTAGGAATTGAATATGGCTTAAGTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000071087.12 ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 ENSMUST00000155974.8 ENSMUST00000186294.7 |
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CDS CAA 72 bp | AAAATCATTAGTGTCATCTCTGGGCATTCTGCGCCCTaGTGCATTATCAGTGCAGATGGTGTCCAAATCAGC | + |
Preference number: 6 (lower is better) Translates to: KIISVISGHSAP*CIISADGVQIS Trigger: GCTGATTTGGACACCATCTGCACTGATAATGCACAAGGGCGCAGAATGCCCAGAGATGACACTAATGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS CAA 72 bp | CTCACCAAATGTGTTTCCCCGGGCAAAAGGAGAGCTTaGTGTTTGCAAAGGACTTATCAGATTTCCTTTGGC | + |
Preference number: 6 (lower is better) Translates to: LTKCVSPGKRRA*CLQRTYQISFG Trigger: GCCAAAGGAAATCTGATAAGTCCTTTGCAAACACAAAGCTCTCCTTTTGCCCGGGGAAACACATTTGGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186294.7 |
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CDS TCA 72 bp | TGGTCCATTACAGTGAACACTTTTATTTTCAGCAGCTaGGATCTGTGTGTTTGGCTCTTCTGGGACATCATC | + |
Preference number: 6 (lower is better) Translates to: WSITVNTFIFSS*DLCVWLFWDII Trigger: GATGATGTCCCAGAAGAGCCAAACACACAGATCTCAGCTGCTGAAAATAAAAGTGTTCACTGTAATGGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS GCA 72 bp | TGCATTATCAGTGCAGATGGTGTCCAAATCAGCTCCTaGATCTCTCCGCATCTTTATTCTATTAAGCCTCTT | + |
Preference number: 6 (lower is better) Translates to: CIISADGVQISS*ISPHLYSIKPL Trigger: AAGAGGCTTAATAGAATAAAGATGCGGAGAGATGCAGGAGCTGATTTGGACACCATCTGCACTGATAATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000187226.7 |
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CDS TCA 72 bp | TGTAGAAGGTTTTGGCTTATCCTCAAAGACCAGTCCTaGATTCCTGAGTCCATCACTAAGAACTTTCTGTTC | + |
Preference number: 6 (lower is better) Translates to: CRRFWLILKDQS*IPESITKNFLF Trigger: GAACAGAAAGTTCTTAGTGATGGACTCAGGAATTCAGGACTGGTCTTTGAGGATAAGCCAAAACCTTCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 |
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CDS TCA 72 bp | GCTTTCGTGAATGAAGGAACTTATGATGGTGTCGACTaGAGGAGGTCTTTGGAGTTTGCTTGCAATTTTGTT | + |
Preference number: 6 (lower is better) Translates to: AFVNEGTYDGVD*RRSLEFACNFV Trigger: AACAAAATTGCAAGCAAACTCCAAAGACCTCCTTCAGTCGACACCATCATAAGTTCCTTCATTCACGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000187226.7 |
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CDS CAA 90 bp | TTTCCCTTCATCTCCATGTACGGTGGATCACTTTCCAATTCTGCTTaGTCTTTGGCCAGTTTCGCTTTTTGCTCTTCAATAAATTCATCC | + |
Preference number: 6 (lower is better) Translates to: FPFISMYGGSLSNSA*SLASFAFCSSINSS Trigger: GGATGAATTTATTGAAGAGCAAAAAGCGAAACTGGCCAAAGACAAAGCAGAATTGGAAAGTGATCCACCGTACATGGAGATGAAGGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000071087.12 ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 ENSMUST00000155974.8 ENSMUST00000191012.7 |
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CDS TCA 72 bp | ACTTTTTCTGTGGATTCTGCCTTACCCCTGAGAAACTaGTTGTATTCTCGGTTGCGTTCAAGTTTCAATCTT | + |
Preference number: 6 (lower is better) Translates to: TFSVDSALPLRN*LYSRLRSSFNL Trigger: AAGATTGAAACTTGAACGCAACCGAGAATACAATCAGTTTCTCAGGGGTAAGGCAGAATCCACAGAAAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000071087.12 ENSMUST00000117415.8 ENSMUST00000118263.8 ENSMUST00000119714.8 ENSMUST00000122156.8 ENSMUST00000149214.3 ENSMUST00000186294.7 |
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CDS GCA 72 bp | AATGCTAAATCTTTTTCTCGTCTCTTCTTCTTCTGTTaGTCAGCTATCTGTTCTAGTAGTTCTTGCCTATAT | + |
Preference number: 6 (lower is better) Translates to: NAKSFSRLFFFC*SAICSSSSCLY Trigger: ATATAGGCAAGAACTACTAGAACAGATAGCTGAGCAACAGAAGAAGAAGAGACGAGAAAAAGATTTAGCATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071087.12 ENSMUST00000186294.7 ENSMUST00000188449.7 |
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CDS GCA 72 bp | TATAGATACAACAGCCCTTTTATCTTCATATGTTCTTaGATCTGGGTTATGGTAGGCATCTATATTCTGTCT | + |
Preference number: 6 (lower is better) Translates to: YRYNSPFIFICS*IWVMVGIYILS Trigger: AGACAGAATATAGATGCCTACCATAACCCAGATGCAAGAACATATGAAGATAAAAGGGCTGTTGTATCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071087.12 |