RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSPG4B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021763

Ensembl transcript IDs: ENSMUST00000078163.14, ENSMUST00000135096.2, ENSMUST00000136755.10

Found 468 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTaGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTG +
Preference number: 1 (lower is better)
Translates to: SLILNRVAGPGKGPL*KAQECKVRHSPTAL
Trigger: CAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR CCA 90 bp CAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGCTGTGAGTaGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGATT +
Preference number: 1 (lower is better)
Translates to: QECKVRHSPTALGCE*ALCVTTPNGQLSLI
Trigger: AATCAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR TCA 90 bp TTCTCCAAAGCTCACTACGGAAAAGCAAGGCCACAAGGTATTGGATaGGATGGACTCTGGGCTTCTAGACCTGGGAGAAAACCCAAGAAA +
Preference number: 1 (lower is better)
Translates to: FSKAHYGKARPQGIG*DGLWASRPGRKPKK
Trigger: TTTCTTGGGTTTTCTCCCAGGTCTAGAAGCCCAGAGTCCATCTCATCCAATACCTTGTGGCCTTGCTTTTCCGTAGTGAGCTTTGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
3UTR CCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTaGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAA +
Preference number: 1 (lower is better)
Translates to: HRYNPELIFVPIHSK*SVTARDGGGEESGK
Trigger: TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR-3UTR TCA 90 bp AAAAACTGTGGGGGACCTTCCTGTGCCCATCAGGAGCTGTTCTCCAAAGCTCACCCACAAGGTATTGGATaGGATGGACTCTGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: KNCGGPSCAHQELFSKAHPQGIG*DGLWAS
Trigger: AGAAGCCCAGAGTCCATCTCATCCAATACCTTGTGG...GTGAGCTTTGGAGAACAGCTCCTGATGGGCACAGGAAGGTCCCCCACAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
3UTR-3UTR CCA 90 bp CAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCCCTATACACAGTAAGTaGTCAGTAACAGCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: QGTTVEGPGVQGTALTNSPIHSK*SVTARD
Trigger: ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGG...GCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR-3UTR TCA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTAACAGCACTGGGCTGTaGGTGGGCCCTGTGTGTAAC +
Preference number: 2 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSNSTGL*VGPVCN
Trigger: GTTACACACAGGGCCCACTCACAGCCCAGTGCTGTT...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR CAA 90 bp AGCTGTTCTCCAAAGCTCACTACGGAAAAGCAAGGCCACAAGGTATaGGATGAGATGGACTCTGGGCTTCTAGACCTGGGAGAAAACCCA +
Preference number: 2 (lower is better)
Translates to: SCSPKLTTEKQGHKV*DEMDSGLLDLGENP
Trigger: TGGGTTTTCTCCCAGGTCTAGAAGCCCAGAGTCCATCTCATCCAATACCTTGTGGCCTTGCTTTTCCGTAGTGAGCTTTGGAGAACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
3UTR-3UTR GCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGCTGGTTGTGTTTCAGTaGGGGGTTGGTTTGTCGACA +
Preference number: 2 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKLVVFQ*GVGLST
Trigger: TGTCGACAAACCAACCCCGCACTGAAACACAACCAG...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
3UTR-3UTR CCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGCCTATACACAGTAAGTaGTCAGTAACAGCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKPIHSK*SVTARD
Trigger: ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGG...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR CAA 90 bp CTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTaGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGA +
Preference number: 2 (lower is better)
Translates to: LSLIRSAFLHRYNPE*IFVPIHSKWSVTAR
Trigger: TCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR-3UTR TCA 90 bp AGTACTGAAAGCTTCATTTTAGACTTACAGAAACTAATGGTGGACAACGGTTCAACGAGGAAACCAACCTaGGGAGACTCCACACACATA +
Preference number: 2 (lower is better)
Translates to: STESFILDLQKLMVDNGSTRKPT*GDSTHI
Trigger: TATGTGTGTGGAGTCTCCTCAGGTTGGTTTCCTCGT...TGAACCGTTGTCCACCATTAGTTTCTGTAAGTCTAAAATGAAGCTTTCAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR-3UTR TCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTGTTTGCCCTGTAATCTaGACAAGGCGTTTCCTGCAC +
Preference number: 2 (lower is better)
Translates to: VDNGSSRQFKYKFAITSIVCPVI*TRRFLH
Trigger: GTGCAGGAAACGCCTTGTTCAGATTACAGGGCAAAC...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR-3UTR TCA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACGCTTCAGATATTTCTTaGCTTTACAGATCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHASDIS*LYRSFC
Trigger: ACAGAAGGATCTGTAAAGTCAAGAAATATCTGAAGC...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR CAA 90 bp CTAAAATCTTTACTATATTACTCTTCACAGAAAAATCTGAATCATTaGTGCAAGCCTCAGTCTCACATTTGTGGGTGTGTTATACTCTGC +
Preference number: 2 (lower is better)
Translates to: LKSLLYYSSQKNLNH*CKPQSHICGCVILC
Trigger: GCAGAGTATAACACACCCACAAATGTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAGTAAAGATTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR GCA 72 bp GGTCCTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTaGAAGGTACGGCACTCACCAACAGCACTGGGCTGT +
Preference number: 3 (lower is better)
Translates to: GPGKGPLWKAQE*KVRHSPTALGC
Trigger: ACAGCCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR CCA 72 bp CTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTaGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCA +
Preference number: 3 (lower is better)
Translates to: LNRVAGPGKGPL*KAQECKVRHSP
Trigger: TGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR GCA 72 bp GCTCCCCATTTATACCCAGTACTGGTTGTGTTTCAGTaGGGGGTTGGTTTGTCGACAGAGCTTGGCCATGTC +
Preference number: 3 (lower is better)
Translates to: APHLYPVLVVFQ*GVGLSTELGHV
Trigger: GACATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGGGTATAAATGGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
3UTR TCA 72 bp GACTATCCTCAAAGGAGGTCAGTTTGCCCTGTAATCTaGACAAGGCGTTTCCTGCACGAGGAAACCAACCTG +
Preference number: 3 (lower is better)
Translates to: DYPQRRSVCPVI*TRRFLHEETNL
Trigger: CAGGTTGGTTTCCTCGTGCAGGAAACGCCTTGTTCAGATTACAGGGCAAACTGACCTCCTTTGAGGATAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR CCA 72 bp TTTATACCCAGTACTGGTTGTGTTTCAGTGCGGGGTTaGTTTGTCGACAGAGCTTGGCCATGTCAGGATCCA +
Preference number: 3 (lower is better)
Translates to: FIPSTGCVSVRG*FVDRAWPCQDP
Trigger: TGGATCCTGACATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGGGTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
3UTR CCA 72 bp AACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTaGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAG +
Preference number: 3 (lower is better)
Translates to: NPELIFVPIHSK*SVTARDGGGEE
Trigger: CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR CCA 72 bp TCTGAATCATTTGTGCAAGCCTCAGTCTCACATTTGTaGGTGTGTTATACTCTGCAGCCCAAGGCTGCCTTA +
Preference number: 3 (lower is better)
Translates to: SESFVQASVSHL*VCYTLQPKAAL
Trigger: TAAGGCAGCCTTGGGCTGCAGAGTATAACACACCCACAAATGTGAGACTGAGGCTTGCACAAATGATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
3UTR GCA 72 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTaGAAGCCTCAGTCTCACATTTGTGGGTGTGTTATA +
Preference number: 3 (lower is better)
Translates to: LYYSSQKNLNHL*KPQSHICGCVI
Trigger: TATAACACACCCACAAATGTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCGCCCCAGAAAGGCGGTaGGCAACAGGAGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QGTTVEGPGVQGTALTNSAPERR*ATGGRR
Trigger: CCTGCGGCCTCCTGTTGCTCACCGCCTTTCTGGGGC...GCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGTGTGAAGGAGTCTTCTaGGGCCCACCCCGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGCEGVF*GPPRAL
Trigger: GAGAGCACGGGGTGGGCCTCAGAAGACTCCTTCACA...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGGCTCCGCCCCCAGAGTaGCCGATCATAGGATTGGGT +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQAPPPE*PIIGLG
Trigger: ACCCAATCCTATGATCGGCCACTCTGGGGGCGGAGC...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS-3UTR TCA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGCGTTGCTGGGAGGAGTaGCCCAGTAGACCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGRCWEE*PSRPSP
Trigger: AGGACTTGGTCTACTGGGTCACTCCTCCCAGCAACG...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGACGCCACATCCTCCATaGATCCCCGGAAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQTPHPP*IPGSWG
Trigger: TCCCCAACTTCCGGGGATGCATGGAGGATGTGGCGT...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGGCGAAATCTGGACCGTaGTGCCTGAAGAGCACACGC +
Preference number: 4 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGAKSGP*CLKSTR
Trigger: GCGTGTGCTCTTCAGGCACCACGGTCCAGATTTCGC...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCTCTTTGCCACTGAGTTaGCCCCAGGAATCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: QGTTVEGPGVQGTALTNSSLPLS*PQESVP
Trigger: GGGGACAGATTCCTGGGGTCAACTCAGTGGCAAAGA...GCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCGGGACTCCCCCACTTTaGTGGCAGCATATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: QGTTVEGPGVQGTALTNSGTPPL*WQHMAK
Trigger: TTTGGCCATATGCTGCCACCAAAGTGGGGGAGTCCC...GCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAAAGGCCTCTGACACACTaGCCTCGAAAAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: LARDHCGRPRSARYGTHQRPLTH*PRKGMM
Trigger: CATCATCCCTTTTCGAGGTCAGTGTGTCAGAGGCCT...TTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCTCTGGTCACCTCAGTaGCAGAATTCACCCACACCT +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQLWSPQ*QNSPTP
Trigger: AGGTGTGGGTGAATTCTGTCACTGAGGTGACCAGAG...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTCCTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACGAGTCTGCCATGTTTTaGGGGTTGCACGATGTGGAA +
Preference number: 4 (lower is better)
Translates to: VLARDHCGRPRSARYGTHESAMF*GLHDVE
Trigger: TTCCACATCGTGCAACCCCCAAAACATGGCAGACTC...GTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAATGTGAAGGAGTCTTCTaGGGCCCACCCCGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HSKWSVTARDGGGEESGKCEGVF*GPPRAL
Trigger: GAGAGCACGGGGTGGGCCTCAGAAGACTCCTTCACA...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGTGTATGAACCACACCTaGGCGTTATTGATGTCCGCC +
Preference number: 4 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGCMNHT*ALLMSA
Trigger: GGCGGACATCAATAACGCTCAGGTGTGGTTCATACA...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAAGTCACTGCTGAGAGATaGGTATTGGTGATGGGGACA +
Preference number: 4 (lower is better)
Translates to: LARDHCGRPRSARYGTHQVTAER*VLVMGT
Trigger: TGTCCCCATCACCAATACTCATCTCTCAGCAGTGAC...TTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGAGCCAGCCTCTGGCTTaGTGGTGGACTTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGSQPLA*WWTYSL
Trigger: CAAAGAATAAGTCCACCAGCAAGCCAGAGGCTGGCT...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCCTTCTGACGACACTTaGACCCTGATGCTCACATCT +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQPSDDT*TLMLTS
Trigger: AGATGTGAGCATCAGGGTCCAAGTGTCGTCAGAAGG...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTCCTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACTCATCAACATCTTGCTaGGTGAAGTTCAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VLARDHCGRPRSARYGTHSSTSC*VKFRVG
Trigger: GCCCACTCTGAACTTCACCCAGCAAGATGTTGATGA...GTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGATGACCACCAGAGGGTaGCGGCTCATTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VPIHSKWSVTARDGGGEEMTTRG*RLISGC
Trigger: GCAGCCGGAAATGAGCCGTCACCCTCTGGTGGTCAT...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGGACCTCGAAAAGGGATaGTGTGTAATGGACACCATC +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQDLEKG*CVMDTI
Trigger: GATGGTGTCCATTACACATCATCCCTTTTCGAGGTC...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp TCAAAAACTGTGGGGGACCTTCCTGTGCCCATCAGGAGCTGTTCTCCAAAGCTCAGGCTGCACTGTATTTaGACGCAGCCGGCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: SKTVGDLPVPIRSCSPKLRLHCI*TQPALS
Trigger: CGACAGAGCCGGCTGCGTGCAAATACAGTGCAGCCT...GAGCTTTGGAGAACAGCTCCTGATGGGCACAGGAAGGTCCCCCACAGTTTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR GCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGTGCAGGGTTCCAGTTTaGACAGCAAATCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQCRVPV*TANLRN
Trigger: GTTCCTGAGATTTGCTGTGCAAACTGGAACCCTGCA...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCCCTCTCCATTTCCTGTaGAGGCCAAGCATCTATTTG +
Preference number: 4 (lower is better)
Translates to: QGTTVEGPGVQGTALTNSPLHFL*RPSIYL
Trigger: CAAATAGATGCTTGGCCTGCACAGGAAATGGAGAGG...GCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAATCTAGAGCCTGTGGATaGGGACTTCAGGTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LARDHCGRPRSARYGTHQSRACG*GLQVCL
Trigger: AAGACAAACCTGAAGTCCCCATCCACAGGCTCTAGA...TTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGACAGGAGCCTGCAGCTaGGACAGCAGTGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VPIHSKWSVTARDGGGEETGACS*DSSACL
Trigger: CAAGCAGGCACTGCTGTCCCAGCTGCAGGCTCCTGT...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGCCTGGAGGATGTTATTaGCTGTTACTACTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGPGGCY*LLLLEP
Trigger: AGGCTCCAGTAGTAACAGCCAATAACATCCTCCAGG...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGGGCTTCTATCTTGTATaGACCACACCTGAGCGTTAT +
Preference number: 4 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGGFYLV*TTPERY
Trigger: ATAACGCTCAGGTGTGGTTCATACAAGATAGAAGCC...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAACAGCATATGGCCAAATaGCCCTGGTGGGAGAGACCT +
Preference number: 4 (lower is better)
Translates to: HSKWSVTARDGGGEESGKQHMAK*PWWERP
Trigger: AGGTCTCTCCCACCAGGGTCATTTGGCCATATGCTG...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CGGCACCTCCTGCTGACTCACCGTGAGGGTGAATCTCCCATGAAAAGCACCCACTGGCTTTGTGGAACCTaGGAAGATGCTCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: RHLLLTHREGESPMKSTHWLCGT*EDAQSS
Trigger: AGAGGATTGAGCATCTTCCCAGGTTCCACAAAGCCA...GTGGGTGCTTTTCATGGGAGATTCACCCTCACGGTGAGTCAGCAGGAGGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp TTGTCCACATTGCATATGTACTCAAAAACTGTGGGGGACCTTCCTGTGCCCATCTGTGAAGGAGTCTTCTaGGGCCCACCCCGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSTLHMYSKTVGDLPVPICEGVF*GPPRAL
Trigger: GAGAGCACGGGGTGGGCCTCAGAAGACTCCTTCACA...GATGGGCACAGGAAGGTCCCCCACAGTTTTTGAGTACATATGCAATGTGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR TCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGAAAATTATCAGCCAGTaGTTCGGAGTCGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQKIISQ*FGVVMK
Trigger: CTTCATGACGACTCCGAATCACTGGCTGATAATTTT...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CTGGGCTGTGAGTGGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGGCCTGTGTAAAATGGTaGGCAGTGGCATCTGGATCG +
Preference number: 4 (lower is better)
Translates to: LGCEWALCVTTPNGQLSLACVKW*AVASGS
Trigger: CGATCCAGATGCCACTGCTCACCATTTTACACAGGC...CAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGACGGTTGTCTCAAAGTaGTTGTCAATGACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGTVVSK*LSMTKR
Trigger: TCTCTTGGTCATTGACAAGCACTTTGAGACAACCGT...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp TTTATACCCAGTACTGGTTGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTCCCTGCCATCTGCCCTaGGTCAGATTCCCCGGAGTT +
Preference number: 4 (lower is better)
Translates to: FIPSTGCVSVRGWFVDRAPCHLP*VRFPGV
Trigger: AACTCCGGGGAATCTGACCCAGGGCAGATGGCAGGG...AGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGGGTATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS-3UTR CCA 90 bp CGGCACCTCCTGCTGACTCACCGTGAGGGTGAATCTCCCATGAAAAGCACCCACAGAAAAGGTCCTAACTaGTTTCCACTCTCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: RHLLLTHREGESPMKSTHRKGPN*FPLSVG
Trigger: TCCAACGGAGAGTGGAAACCAGTTAGGACCTTTTCT...GTGGGTGCTTTTCATGGGAGATTCACCCTCACGGTGAGTCAGCAGGAGGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTCTGACCCCTCCCTGTTaGCCCAGACCTGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSLTPPC*PRPVAE
Trigger: CTCTGCCACAGGTCTGGGCCAACAGGGAGGGGTCAG...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGTGTGAACACTGCCTCTaGAGGAATATCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQCEHCL*RNIFFI
Trigger: AATGAAGAAGATATTCCTTCAGAGGCAGTGTTCACA...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTTGCCACACTCCCTGCTaGAGCCTGCAGATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSCHTPC*SLQMAR
Trigger: TCTGGCCATCTGCAGGCTGCAGCAGGGAGTGTGGCA...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGAGTCCCCTCTCAGGTaGTGCCACACTCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGESPLR*CHTPCC
Trigger: GCAGCAGGGAGTGTGGCAGCACCTGAGAGGGGACTC...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTCCTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCTTATTCTTTGGGTTTaGCCAAACAGCAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: VLARDHCGRPRSARYGTHLILWV*PNSKGK
Trigger: TTTACCTTTGCTGTTTGGCCAAACCCAAAGAATAAG...GTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CGGCACCTCCTGCTGACTCACCGTGAGGGTGAATCTCCCATGAAAAGCACCCACGGTGGACTTATTCTTTaGGTTTGGCCAAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: RHLLLTHREGESPMKSTHGGLIL*VWPNSK
Trigger: TTTGCTGTTTGGCCAAACCCAAAGAATAAGTCCACC...GTGGGTGCTTTTCATGGGAGATTCACCCTCACGGTGAGTCAGCAGGAGGTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAATTCAGTAGACCCTCATaGATTTCCAAGGCAACAAAA +
Preference number: 4 (lower is better)
Translates to: LARDHCGRPRSARYGTHQFSRPS*ISKATK
Trigger: TTTTGTTGCCTTGGAAATCCATGAGGGTCTACTGAA...TTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAACAGCCGAAATGTCTCTaGAGACAAGAGCATCCCGTA +
Preference number: 4 (lower is better)
Translates to: HSKWSVTARDGGGEESGKQPKCL*RQEHPV
Trigger: TACGGGATGCTCTTGTCTCCAGAGACATTTCGGCTG...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGGTCGTGGGAGAGGATaGCTCTGGTGGAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGGRGRG*LWWKQV
Trigger: GACCTGTTTCCACCAGAGCCATCCTCTCCCACGACC...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGAAGGAACCCATGAGCTaGCATTTCCTGTATCTTAAA +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQKEPMS*HFLYLK
Trigger: TTTAAGATACAGGAAATGCCAGCTCATGGGTTCCTT...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGACTCTAAACTTAAAGTaGTCCGTCACATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQTLNLK*SVTFSC
Trigger: GCAAGAAAATGTGACGGATCACTTTAAGTTTAGAGT...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGCTGATGTTCAGTGTCTaGTCCGTCAAGTTGCACTCC +
Preference number: 4 (lower is better)
Translates to: VPIHSKWSVTARDGGGEELMFSV*SVKLHS
Trigger: GGAGTGCAACTTGACGGAGCAGACACTGAACATCAG...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTGTGGAACAGGAGCCTaGAGCTGGGACAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPECGTGA*SWDSSA
Trigger: GGCACTGCTGTCCCAGCTGCAGGCTCCTGTTCCACA...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGCTGGTTGTGTTTCAGTaGGGGGTTGGTTTGTCGACA +
Preference number: 4 (lower is better)
Translates to: VPIHSKWSVTARDGGGEELVVFQ*GVGLST
Trigger: TGTCGACAAACCAACCCCGCACTGAAACACAACCAG...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACTTATTCTTTGGGTTTaGCCAAACAGCAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: LARDHCGRPRSARYGTHQLILWV*PNSKGK
Trigger: TTTACCTTTGCTGTTTGGCCAAACCCAAAGAATAAG...TTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGCCCTGCCATCTGCCCTaGGTCAGATTCCCCGGAGTT +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGPCHLP*VRFPGV
Trigger: AACTCCGGGGAATCTGACCCAGGGCAGATGGCAGGG...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CAGTACTGGTTGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTTGGCCATGCTTCAGGTTTGTCTTTaGCTGGGTAAGTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QYWLCFSAGLVCRQSLAMLQVCL*LGKWFG
Trigger: CCCAAACCACTTACCCAGCCAAAGACAAACCTGAAG...CATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
3UTR CAA 72 bp CCAAAGCTCACTACGGAAAAGCAAGGCCACAAGGTATaGGATGAGATGGACTCTGGGCTTCTAGACCTGGGA +
Preference number: 4 (lower is better)
Translates to: PKLTTEKQGHKV*DEMDSGLLDLG
Trigger: TCCCAGGTCTAGAAGCCCAGAGTCCATCTCATCCAATACCTTGTGGCCTTGCTTTTCCGTAGTGAGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR TCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGTGTATGAACCACACCTaGGCGTTATTGATGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKCMNHT*ALLMSA
Trigger: GGCGGACATCAATAACGCTCAGGTGTGGTTCATACA...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CCAGTACTGGTTGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTTGGCCATACCATTGGTCACTGCTaGGAGATGAGTATTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PVLVVFQCGVGLSTELGHTIGHC*EMSIGD
Trigger: ATCACCAATACTCATCTCTCAGCAGTGACCAATGGT...ATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS-3UTR TCA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATATGACCACCAGAGGGTaGCGGCTCATTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PELIFVPIHSKWSVTARDMTTRG*RLISGC
Trigger: GCAGCCGGAAATGAGCCGTCACCCTCTGGTGGTCAT...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CTGGGCTGTGAGTGGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGCTGAATGAAGAGAGTTaGGTTTTTGTTCCGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LGCEWALCVTTPNGQLSLLNEES*VFVPPL
Trigger: AAGGGGCGGAACAAAAACTCAACTCTCTTCATTCAG...CAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp TTGTCCACATTGCATATGTACTCAAAAACTGTGGGGGACCTTCCTGTGCCCATCCGCTGGAGGGGAAGATaGTGTGAATGTGAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LSTLHMYSKTVGDLPVPIRWRGR*CECEGV
Trigger: GACTCCTTCACATTCACAGCATCTTCCCCTCCAGCG...GATGGGCACAGGAAGGTCCCCCACAGTTTTTGAGTACATATGCAATGTGGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR GCA 90 bp CTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAAGCACATAGAAAATGTTaGCATCTTGTAAATCCATGT +
Preference number: 4 (lower is better)
Translates to: LARDHCGRPRSARYGTHQAHRKC*HLVNPC
Trigger: ACATGGATTTACAAGATGGCAACATTTTCTATGTGC...TTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGGGAACAGGAGCTCTCTaGCTACTCTTCCCTCTATGT +
Preference number: 4 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKGTGAL*LLFPLC
Trigger: ACATAGAGGGAAGAGTAGGCAGAGAGCTCCTGTTCC...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTATGCTGCCACACTCCCTaGTGCAGCCTGCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVCCHTP*CSLQMA
Trigger: GGCCATCTGCAGGCTGCAGCAGGGAGTGTGGCAGCA...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CTGGGCTGTGAGTGGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGATCTCTGTAGACGTGTaGTCAGAGTCAAGACTTCTG +
Preference number: 4 (lower is better)
Translates to: LGCEWALCVTTPNGQLSLISVDV*SESRLL
Trigger: CAGAAGTCTTGACTCTGAGCACACGTCTACAGAGAT...CAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTGGGACTCCCCCACTTTaGTGGCAGCATATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSGTPPL*WQHMAK
Trigger: TTTGGCCATATGCTGCCACCAAAGTGGGGGAGTCCC...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CATATGTACTCAAAAACTGTGGGGGACCTTCCTGTGCCCATCAGGAGCTGTTCTAAAGGCAGGCCCAAATaGGCCCCTTACGGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: HMYSKTVGDLPVPIRSCSKGRPK*APYGFY
Trigger: ATAGAAACCGTAAGGGGCCCATTTGGGCCTGCCTTT...AGAACAGCTCCTGATGGGCACAGGAAGGTCCCCCACAGTTTTTGAGTACATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR CCA 90 bp CTGGGCTGTGAGTGGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGGCGCCACCTCTCTCCTaGAAAATTTCATTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LGCEWALCVTTPNGQLSLAPPLS*KISLAS
Trigger: TGAAGCTAATGAAATTTTCCAGGAGAGAGGTGGCGC...CAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
3UTR CAA 72 bp ATTTATACCCAGTACTGGTTGTGTTTCAGTGCGGGGTaGGTTTGTCGACAGAGCTTGGCCATGTCAGGATCC +
Preference number: 4 (lower is better)
Translates to: IYTQYWLCFSAG*VCRQSLAMSGS
Trigger: GGATCCTGACATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGGGTATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS-3UTR TCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGCTTTATCTCCCTCCTTaGCAGAGGCTCCTGTATTTG +
Preference number: 4 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKLYLPP*QRLLYL
Trigger: CAAATACAGGAGCCTCTGTCAAGGAGGGAGATAAAG...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTCTTTGCCACTGAGTTaGCCCCAGGAATCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPESLPLS*PQESVP
Trigger: GGGGACAGATTCCTGGGGTCAACTCAGTGGCAAAGA...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGCAGCATATGGCCAAATaGCCCTGGTGGGAGAGACCT +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPEQHMAK*PWWERP
Trigger: AGGTCTCTCCCACCAGGGTCATTTGGCCATATGCTG...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp TTGTCCACATTGCATATGTACTCAAAAACTGTGGGGGACCTTCCTGTGCCCATCTGTTCCTCCTGTCTGTaGCACTCAAGGAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LSTLHMYSKTVGDLPVPICSSCL*HSRSLG
Trigger: TCCAAGACTCCTTGAGTGTCACAGACAGGAGGAACA...GATGGGCACAGGAAGGTCCCCCACAGTTTTTGAGTACATATGCAATGTGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR TCA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGCAAAGTGCTTGTCAATaGCCAAGAGAACAGCATCCT +
Preference number: 4 (lower is better)
Translates to: VPIHSKWSVTARDGGGEEQSACQ*PREQHP
Trigger: AGGATGCTGTTCTCTTGGTCATTGACAAGCACTTTG...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGCTATGTCTTCGTCTGTaGATCCAGTGGCCCTATTGT +
Preference number: 4 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKLCLRL*IQWPYC
Trigger: ACAATAGGGCCACTGGATTCACAGACGAAGACATAG...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTATGCCAGGAGTGGACTTaGGAGCCAGATGCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVCQEWT*EPDARC
Trigger: GCAACGGGCATCTGGCTCTCAAGTCCACTCCTGGCA...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAATCCACACGAAGTCTTTaGTCAGAAAGGAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: HSKWSVTARDGGGEESGKSTRSL*SERRIS
Trigger: AGAAATCCTCCTTTCTGAGCAAAGACTTCGTGTGGA...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGCCATCATCAACATCTTaGTGGGTGAAGTTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: VPIHSKWSVTARDGGGEEPSSTS*WVKFRV
Trigger: CACTCTGAACTTCACCCAGCAAGATGTTGATGATGG...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp TCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTTGATCTTCGTAGACTTGAGAGCCAGATaGCCGTTGCTGGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLIRSAFLHRYNPELIFVDLRAR*PLLGGV
Trigger: CACTCCTCCCAGCAACGGGCATCTGGCTCTCAAGTC...TACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGTGGCTTTGTGGAACCTaGGAAGATGCTCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKWLCGT*EDAQSS
Trigger: AGAGGATTGAGCATCTTCCCAGGTTCCACAAAGCCA...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGGGAAGAGCCGTAACCTaGAACCAGATTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKGRAVT*NQISWE
Trigger: TTCCCATGAAATCTGGTTCCAGGTTACGGCTCTTCC...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CCAGTACTGGTTGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTTGGCCATGGTGGACTTATTCTTTaGGTTTGGCCAAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: PVLVVFQCGVGLSTELGHGGLIL*VWPNSK
Trigger: TTTGCTGTTTGGCCAAACCCAAAGAATAAGTCCACC...ATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS-3UTR CCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGATGGGGACAGTGTTCTaGCCTTGTGGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPEMGTVF*PCGRSR
Trigger: CCTGCTTCTCCCACAAGGCCAGAACACTGTCCCCAT...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGAGCAAGTGGCCGCTTTaGAGGGGCTGTGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPESKWPL*RGCVIL
Trigger: CAGAATGACACAGCCCCTCCAAAGCGGCCACTTGCT...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAAGTGTACCTTCCATTCTaGAAAGGTAACATAGGACCT +
Preference number: 4 (lower is better)
Translates to: HSKWSVTARDGGGEESGKVYLPF*KGNIGP
Trigger: AGGTCCTATGTTACCTTTCCAGAATGGAAGGTACAC...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGCTGCAGCCTGCAGATaGCCAGAATCCAATACTTTC +
Preference number: 4 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGAAACR*PESNTF
Trigger: GAAAGTATTGGATTCTGGCCATCTGCAGGCTGCAGC...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CTGGGCTGTGAGTGGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGCTATATCTTCTACATTaGGGATTTCAGGTCCCACAA +
Preference number: 4 (lower is better)
Translates to: LGCEWALCVTTPNGQLSLLYLLH*GFQVPQ
Trigger: TTGTGGGACCTGAAATCCTCAATGTAGAAGATATAG...CAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAAGTCATGCTGGGAAAATaGGTGAAAGGTAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: HSKWSVTARDGGGEESGKVMLGK*VKGRIV
Trigger: AACAATTCTACCTTTCACTCATTTTCCCAGCATGAC...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGCGCTGGAGGGGAAGATaGTGTGAATGTGAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGRWRGR*CECEGV
Trigger: GACTCCTTCACATTCACAGCATCTTCCCCTCCAGCG...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTGAATCCAAATCCTCCTaGCCAAAGCTGTTGACCACC +
Preference number: 4 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSESKSS*PKLLTT
Trigger: GGTGGTCAACAGCTTTGGGCAGGAGGATTTGGATTC...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGACATCTACTTCTATATaGCTTTGTCCCAGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: VPIHSKWSVTARDGGGEETSTSI*LCPSKA
Trigger: GGCCTTACTGGGACAAAGGCATATAGAAGTAGATGT...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTAAGAGTCCCCATCTCCTaGACACAGGTCCCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVRVPIS*TQVPSG
Trigger: ACCAGAGGGGACCTGTGTGCAGGAGATGGGGACTCT...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CATATGTACTCAAAAACTGTGGGGGACCTTCCTGTGCCCATCAGGAGCTGTTCTTCGCTCACCAGACATTaGGTAAAAGTGGAAACATCC +
Preference number: 4 (lower is better)
Translates to: HMYSKTVGDLPVPIRSCSSLTRH*VKVETS
Trigger: GGATGTTTCCACTTTTACCCAATGTCTGGTGAGCGA...AGAACAGCTCCTGATGGGCACAGGAAGGTCCCCCACAGTTTTTGAGTACATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR CCA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTCAGAAAGCCAGCCTCTaGCTTGCTGGTGGACTTATT +
Preference number: 4 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSQKASL*LAGGLI
Trigger: AATAAGTCCACCAGCAAGCCAGAGGCTGGCTTTCTG...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp TCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTTGATCTTCGTAATGGGGACAGTGTTCTaGCCTTGTGGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLIRSAFLHRYNPELIFVMGTVF*PCGRSR
Trigger: CCTGCTTCTCCCACAAGGCCAGAACACTGTCCCCAT...TACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATAGCACCAGCTGCCCTTaGTTGATGTCTGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PELIFVPIHSKWSVTARDSTSCP*LMSVWV
Trigger: CACCCAGACAGACATCAACCAAGGGCAGCTGGTGCT...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGGAGTCATTCAGTGTGTaGGTGCCTGTTAGATTAGCA +
Preference number: 4 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKESFSV*VPVRLA
Trigger: TGCTAATCTAACAGGCACCCACACACTGAATGACTC...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGTGGTGGGAGAGACCTTaGCATCTATATTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKWWERP*HLYLAL
Trigger: AAGAGCCAAATATAGATGCCAAGGTCTCTCCCACCA...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGCTTCAGGTTTGTCTTTaGCTGGGTAAGTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGLQVCL*LGKWFG
Trigger: CCCAAACCACTTACCCAGCCAAAGACAAACCTGAAG...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATTGCATCCCCGGAAGTTaGGGATCTTCCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PELIFVPIHSKWSVTARDCIPGS*GSSCPG
Trigger: ACCTGGACAGGAAGATCCCCAACTTCCGGGGATGCA...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTGTAAGGATCTCCCTCTaGTTAAACGCCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSVRISL*LNATSS
Trigger: GGAGGATGTGGCGTTTAACCAGAGGGAGATCCTTAC...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGTCTGTTCTGACATCTTaGTTTGTGGTGACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGSVLTS*FVVTLR
Trigger: CCTGAGCGTCACCACAAACCAAGATGTCAGAACAGA...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp TCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTTGATCTTCGTAGTAGACCAAGTCCTGTaGGGAAGAGTCCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: SLIRSAFLHRYNPELIFVVDQVL*GRVPIS
Trigger: GGAGATGGGGACTCTTCCCCACAGGACTTGGTCTAC...TACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGGCTTCTATCTTGTATaGACCACACCTGAGCGTTAT +
Preference number: 4 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGGFYLV*TTPERY
Trigger: ATAACGCTCAGGTGTGGTTCATACAAGATAGAAGCC...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAAAGGCTGCACCCTaGTGTTCAGTGTCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVTKAAP*CSVSAP
Trigger: CGGAGCAGACACTGAACATCAGGGTGCAGCCTTTGT...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGGTGGAATCAGTAGCTTaGAATGGAGTCCCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPEVESVA*NGVPSQ
Trigger: CTGAGAGGGGACTCCATTTCAAGCTACTGATTCCAC...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGGCGGTTCGAGGAGAATaGATTCACAGTCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPEAVRGE*IHSQDP
Trigger: AGGGTCTTGACTGTGAATTCATTCTCCTCGAACCGC...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CATTGCATATGTACTCAAAAACTGTGGGGGACCTTCCTGTGCCCATCAGGAGCTTACAGTTCTGTTTCCTaGCTTGTCATCATTGGTCAC +
Preference number: 4 (lower is better)
Translates to: HCICTQKLWGTFLCPSGAYSSVS*LVIIGH
Trigger: GTGACCAATGATGACAAGGCAGGAAACAGAACTGTA...AGCTCCTGATGGGCACAGGAAGGTCCCCCACAGTTTTTGAGTACATATGCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR GCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAGTCAACTGCAGCCACTaGACAGTCACAGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVVNCSH*TVTGNR
Trigger: CCTGTTCCCTGTGACTGTGCAGTGGCTGCAGTTGAC...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGTCGCTCACCAGACATTaGGTAAAAGTGGAAACATCC +
Preference number: 4 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGSLTRH*VKVETS
Trigger: GGATGTTTCCACTTTTACCCAATGTCTGGTGAGCGA...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATAGTGTTCTGGCCTTGTaGGAGAAGCAGGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PELIFVPIHSKWSVTARDSVLAL*EKQVCE
Trigger: CTCACAGACCTGCTTCTCCCACAAGGCCAGAACACT...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp TTTATACCCAGTACTGGTTGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTAGGTTTGTCTTTGGCTaGGTAAGTGGTTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FIPSTGCVSVRGWFVDRARFVFG*VSGLGL
Trigger: CAAACCCAAACCACTTACCCAGCCAAAGACAAACCT...AGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGGGTATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS-3UTR CCA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTTCTAGAGCCTGTGGATaGGGACTTCAGGTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSSRACG*GLQVCL
Trigger: AAGACAAACCTGAAGTCCCCATCCACAGGCTCTAGA...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTAAGAGGATGGCTCTGGTaGAAACAGGTCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVRGWLW*KQVFPC
Trigger: GCAGGGGAAGACCTGTTTCCACCAGAGCCATCCTCT...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTAAACTGGGAATGGTCGTaGGAGAGGATGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVNWEWS*ERMALV
Trigger: CACCAGAGCCATCCTCTCCCACGACCATTCCCAGTT...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGTCTTCTGAACCATCGTaGACATACCACACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGSSEPS*TYHTFP
Trigger: TGGGAAAGTGTGGTATGTCCACGATGGTTCAGAAGA...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGAATGTTAAACACATGTaGAACAGGAGCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGNVKHM*NRSLQL
Trigger: CAGCTGCAGGCTCCTGTTCCACATGTGTTTAACATT...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGCTCATTCACTTCATATaGAATGGTGATCCGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKLIHFI*NGDPKS
Trigger: GCTTTTCGGATCACCATTTCATATGAAGTGAATGAG...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp TTTATACCCAGTACTGGTTGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTAAAATTATCAGCCAGTaGTTCGGAGTCGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: FIPSTGCVSVRGWFVDRAKIISQ*FGVVMK
Trigger: CTTCATGACGACTCCGAATCACTGGCTGATAATTTT...AGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGGGTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS-3UTR TCA 90 bp TCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTTGATCTTCGTAGTCACTGCTGAGAGATaGGTATTGGTGATGGGGACA +
Preference number: 4 (lower is better)
Translates to: SLIRSAFLHRYNPELIFVVTAER*VLVMGT
Trigger: TGTCCCCATCACCAATACTCATCTCTCAGCAGTGAC...TACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGCTTAAAGCCAGGGTATaGCCTAAGGGACGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGLKARV*PKGRKD
Trigger: ATCCTTACGTCCCTTAGGTCATACCCTGGCTTTAAG...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTATTGGAGCCCCCTTCTTaGACTGTGAGATTCTGCACC +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVLEPPS*TVRFCT
Trigger: GGTGCAGAATCTCACAGTTCAAGAAGGGGGCTCCAA...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGCTTGCAATTTGGAGGTaGTCCTGCAGAAGTACCTTG +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPELAIWR*SCRSTL
Trigger: CAAGGTACTTCTGCAGGATCACCTCCAAATTGCAAG...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp TCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTTGATCTTCGTAGAATCCAAATCCTCCTaGCCAAAGCTGTTGACCACC +
Preference number: 4 (lower is better)
Translates to: SLIRSAFLHRYNPELIFVESKSS*PKLLTT
Trigger: GGTGGTCAACAGCTTTGGGCAGGAGGATTTGGATTC...TACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATAAACAGGTCTTCCCCTaGCACAGAAGGATCTGTACC +
Preference number: 4 (lower is better)
Translates to: PELIFVPIHSKWSVTARDKQVFP*HRRICT
Trigger: GGTACAGATCCTTCTGTGGCAGGGGAAGACCTGTTT...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CTGGGCTGTGAGTGGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGGACATGTGTCTTATCTaGTTTAAGGTCTATCCTAAA +
Preference number: 4 (lower is better)
Translates to: LGCEWALCVTTPNGQLSLDMCLI*FKVYPK
Trigger: TTTAGGATAGACCTTAAAGCAGATAAGACACATGTC...CAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGGCTGAAGTAAGAGGTTaGAGGCATCTAATTTTGATT +
Preference number: 4 (lower is better)
Translates to: VPIHSKWSVTARDGGGEEAEVRG*RHLILI
Trigger: AATCAAAATTAGATGCCTCCAACCTCTTACTTCAGC...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAAGAGCCGTAACCTaGAACCAGATTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGGRAVT*NQISWE
Trigger: TTCCCATGAAATCTGGTTCCAGGTTACGGCTCTTCC...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAAGTGTTCTGGCCTTGTaGGAGAAGCAGGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVSVLAL*EKQVCE
Trigger: CTCACAGACCTGCTTCTCCCACAAGGCCAGAACACT...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp TCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTTGATCTTCGTAGTTTCCACTCTCCGTTaGATCCCCGGTGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: SLIRSAFLHRYNPELIFVVSTLR*IPGAEF
Trigger: AAATTCAGCACCGGGGATCCAACGGAGAGTGGAAAC...TACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATTCTTCATTCCCAGCCTaGAGCTTTCCTCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PELIFVPIHSKWSVTARDSSFPA*SFPLLS
Trigger: ACTGAGCAGAGGAAAGCTCCAGGCTGGGAATGAAGA...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp TTGTCCACATTGCATATGTACTCAAAAACTGTGGGGGACCTTCCTGTGCCCATCCTCATTCACTTCATATaGAATGGTGATCCGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LSTLHMYSKTVGDLPVPILIHFI*NGDPKS
Trigger: GCTTTTCGGATCACCATTTCATATGAAGTGAATGAG...GATGGGCACAGGAAGGTCCCCCACAGTTTTTGAGTACATATGCAATGTGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR TCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTTTAATTCTGGAGGCTaGTCATTCACAGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPEFNSGG*SFTGVM
Trigger: CATCACCCCTGTGAATGATCAGCCTCCAGAATTAAA...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGACCATTGGTCACTGCTaGGAGATGAGTATTGGTGAT +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGTIGHC*EMSIGD
Trigger: ATCACCAATACTCATCTCTCAGCAGTGACCAATGGT...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AGTACTGAAAGCTTCATTTTAGACTTACAGAAACTAATGGTGGACAACGGTTCAACAAAGGCTGCACCCTaGTGTTCAGTGTCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: STESFILDLQKLMVDNGSTKAAP*CSVSAP
Trigger: CGGAGCAGACACTGAACATCAGGGTGCAGCCTTTGT...TGAACCGTTGTCCACCATTAGTTTCTGTAAGTCTAAAATGAAGCTTTCAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAAGCCAGCCTCTGGCTTaGTGGTGGACTTATTCTTTG +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVSQPLA*WWTYSL
Trigger: CAAAGAATAAGTCCACCAGCAAGCCAGAGGCTGGCT...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTACTGATGTTCAGTGTCTaGTCCGTCAAGTTGCACTCC +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVLMFSV*SVKLHS
Trigger: GGAGTGCAACTTGACGGAGCAGACACTGAACATCAG...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTCTCCAAATACTTGCTTaGAATTTGGAGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSLQILA*NLEVIL
Trigger: CAGGATCACCTCCAAATTGCAAGCAAGTATTTGGAG...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTCGCTCACCAGACATTaGGTAAAAGTGGAAACATCC +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPESLTRH*VKVETS
Trigger: GGATGTTTCCACTTTTACCCAATGTCTGGTGAGCGA...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGAGTCATTCAGTGTGTaGGTGCCTGTTAGATTAGCA +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGESFSV*VPVRLA
Trigger: TGCTAATCTAACAGGCACCCACACACTGAATGACTC...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGTGGTGGGAGAGACCTTaGCATCTATATTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGWWERP*HLYLAL
Trigger: AAGAGCCAAATATAGATGCCAAGGTCTCTCCCACCA...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGAGGTTTGTCTTTGGCTaGGTAAGTGGTTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGRFVFG*VSGLGL
Trigger: CAAACCCAAACCACTTACCCAGCCAAAGACAAACCT...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTATTTTCAGAGGAGAACTaGGAATGGTCGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVFSEEN*EWSWER
Trigger: CCTCTCCCACGACCATTCCCAGTTCTCCTCTGAAAA...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGAATTCACCCACACCTaGAGGATGTTATTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGEFTHT*RMLLAV
Trigger: AACAGCCAATAACATCCTCCAGGTGTGGGTGAATTC...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACTGAGGTGGATGTGTaGTGTCATAGAGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVTEVDV*CHRECP
Trigger: TGGACACTCTCTATGACATCACACATCCACCTCAGT...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTATTCAGTTCCCCATGCTaGGGACTCTTGGTGACTTTA +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVFSSPC*GLLVTL
Trigger: TAAAGTCACCAAGAGTCCTCAGCATGGGGAACTGAA...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGTACAGTTCTGTTTCCTaGCTTGTCATCATTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGYSSVS*LVIIGH
Trigger: GTGACCAATGATGACAAGGCAGGAAACAGAACTGTA...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGAATAAAAGCAAAGCCTaGAGGGTTCCAGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPENKSKA*RVPVCT
Trigger: TGTGCAAACTGGAACCCTGCAGGCTTTGCTTTTATT...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTAGCAAGTGGCCGCTTTaGAGGGGCTGTGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSISKWPL*RGCVIL
Trigger: CAGAATGACACAGCCCCTCCAAAGCGGCCACTTGCT...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTAGCACCAGCTGCCCTTaGTTGATGTCTGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSISTSCP*LMSVWV
Trigger: CACCCAGACAGACATCAACCAAGGGCAGCTGGTGCT...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGCTTGGCATCTATATTTaGCTCTTTGCCACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGLGIYI*LFATEL
Trigger: CAACTCAGTGGCAAAGAGCCAAATATAGATGCCAAG...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTACTCTCTTTTCCAAATTaGCTTCTAAGGCTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVLSFPN*LLRLAG
Trigger: GCCTGCGAGCCTTAGAAGCCAATTTGGAAAAGAGAG...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTATGCCGTCTTCTGCTGTaGATATTTGGAGGTATCCGT +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVCRLLL*IFGGIR
Trigger: ACGGATACCTCCAAATATCCACAGCAGAAGACGGCA...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTACATCGAGGGTGAACTaGTCCTTTTGCTGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSITSRVN*SFCWPG
Trigger: TCCCGGCCAGCAAAAGGACCAGTTCACCCTCGATGT...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTCACTCTTGGAAACTTaGAGCTTTCGACATAACCGT +
Preference number: 4 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPESLLET*SFRHNR
Trigger: ACGGTTATGTCGAAAGCTCCAAGTTTCCAAGAGTGA...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTGCCTGTGTAAAATGGTaGGCAGTGGCATCTGGATCG +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSIACVKW*AVASGS
Trigger: CGATCCAGATGCCACTGCTCACCATTTTACACAGGC...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACCTTCCTCTGCCGGACTaGAATAAAAGCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHLPLPD*NKSKAC
Trigger: GCAGGCTTTGCTTTTATTTCAGTCCGGCAGAGGAAG...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTACCTGGAGCTTTCCTCTaGTCAGTTTTACTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVPGAFL*SVLLVF
Trigger: GAAAACCAGTAAAACTGAGCAGAGGAAAGCTCCAGG...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AGTACTGAAAGCTTCATTTTAGACTTACAGAAACTAATGGTGGACAACGGTTCACAGAAAGCCAGCCTCTaGCTTGCTGGTGGACTTATT +
Preference number: 4 (lower is better)
Translates to: STESFILDLQKLMVDNGSQKASL*LAGGLI
Trigger: AATAAGTCCACCAGCAAGCCAGAGGCTGGCTTTCTG...TGAACCGTTGTCCACCATTAGTTTCTGTAAGTCTAAAATGAAGCTTTCAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTCTCTCCCGGGCTCCCTaGCATTTTCTAAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSILSRAP*HFLKTQ
Trigger: CTGGGTTTTTAGAAAATGCCAGGGAGCCCGGGAGAG...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTATTGGCCAAACTGAGGTaGATGTGTGATGTCATAGAG +
Preference number: 4 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVLAKLR*MCDVIE
Trigger: CTCTATGACATCACACATCCACCTCAGTTTGGCCAA...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
3UTR CAA 72 bp ATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTaGATCTTCGTACCTATACACAGTAAGTGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: IRSAFLHRYNPE*IFVPIHSKWSV
Trigger: TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGACTAACCAAGCTGAATaGAGAGAGTTGAGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGTNQAE*RELSFC
Trigger: ACAAAAACTCAACTCTCTTCATTCAGCTTGGTTAGT...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AGTACTGAAAGCTTCATTTTAGACTTACAGAAACTAATGGTGGACAACGGTTCACCCATGCCTCAAATCTaGCAGAGTAAAAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: STESFILDLQKLMVDNGSPMPQI*QSKSPL
Trigger: GAGAGGACTTTTACTCTGTCAGATTTGAGGCATGGG...TGAACCGTTGTCCACCATTAGTTTCTGTAAGTCTAAAATGAAGCTTTCAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp AGTACTGAAAGCTTCATTTTAGACTTACAGAAACTAATGGTGGACAACGGTTCAATCCAAGTTCACCCATaGGTCCCAAGGAGCACATTT +
Preference number: 4 (lower is better)
Translates to: STESFILDLQKLMVDNGSIQVHP*VPRSTF
Trigger: AAATGTGCTCCTTGGGACGCATGGGTGAACTTGGAT...TGAACCGTTGTCCACCATTAGTTTCTGTAAGTCTAAAATGAAGCTTTCAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGCGGATGATCTCATATTaGATTTCATTTGGAGGACTA +
Preference number: 4 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGRMISY*ISFGGL
Trigger: TAGTCCTCCAAATGAAATCCAATATGAGATCATCCG...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATAGCCTTGTGGCTTGCTaGTTTGAAATCTTAACTGAA +
Preference number: 4 (lower is better)
Translates to: PELIFVPIHSKWSVTARDSLVAC*FEILTE
Trigger: TTCAGTTAAGATTTCAAACCAGCAAGCCACAAGGCT...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTCTTTATCTCCCTCCTTaGCAGAGGCTCCTGTATTTG +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSILYLPP*QRLLYL
Trigger: CAAATACAGGAGCCTCTGTCAAGGAGGGAGATAAAG...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACTTTAATTCTGGAGGCTaGTCATTCACAGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHFNSGG*SFTGVM
Trigger: CATCACCCCTGTGAATGATCAGCCTCCAGAATTAAA...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTACTATATCTTCTACATTaGGGATTTCAGGTCCCACAA +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVLYLLH*GFQVPQ
Trigger: TTGTGGGACCTGAAATCCTCAATGTAGAAGATATAG...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTAAAAAAGCTGCCACTTTaGATTTTCAGAGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVKKLPL*IFRGEL
Trigger: CAGTTCTCCTCTGAAAATTCAAAGTGGCAGCTTTTT...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTATCTGTAGGCTCTTCTaGACCATCGTGGACATACCA +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSIICRLF*TIVDIP
Trigger: TGGTATGTCCACGATGGTTCAGAAGAGCCTACAGAT...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTAGTAAGCCTTGTGGCTTaGTGGTTTGAAATCTTAACT +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVVSLVA*WFEILT
Trigger: AGTTAAGATTTCAAACCAGCAAGCCACAAGGCTTAC...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTATCCGTCACATTTTCTTaGTGCAATCCCTTGAATGAA +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVSVTFS*CNPLNE
Trigger: TTCATTCAAGGGATTGCAGCAAGAAAATGTGACGGA...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTTTCAGAAGTGTCAACTaGAGCCACTGCACAGTCACA +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSIFRSVN*SHCTVT
Trigger: TGTGACTGTGCAGTGGCTGCAGTTGACACTTCTGAA...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGCTGAAGTAAGAGGTTaGAGGCATCTAATTTTGATT +
Preference number: 4 (lower is better)
Translates to: PELIFVPIHSKWSVTARDAEVRG*RHLILI
Trigger: AATCAAAATTAGATGCCTCCAACCTCTTACTTCAGC...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTATTGGCTGTTACTACTaGAGCCTCGTCGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSIIGCYY*SLVVHR
Trigger: TCTGTGAACGACGAGGCTCCAGTAGTAACAGCCAAT...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACTGCTGGGAAAATGAGTaGAAGGTAGAATTGTTGACC +
Preference number: 4 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHCWENE*KVELLT
Trigger: GGTCAACAATTCTACCTTTCACTCATTTTCCCAGCA...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACTACAGTTCTGTTTCCTaGCTTGTCATCATTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHYSSVS*LVIIGH
Trigger: GTGACCAATGATGACAAGGCAGGAAACAGAACTGTA...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTACGGATGATCTCATATTaGATTTCATTTGGAGGACTA +
Preference number: 4 (lower is better)
Translates to: NLRRLHTHKYSINKLADVRMISY*ISFGGL
Trigger: TAGTCCTCCAAATGAAATCCAATATGAGATCATCCG...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AGTACTGAAAGCTTCATTTTAGACTTACAGAAACTAATGGTGGACAACGGTTCACTTGGCATCTATATTTaGCTCTTTGCCACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: STESFILDLQKLMVDNGSLGIYI*LFATEL
Trigger: CAACTCAGTGGCAAAGAGCCAAATATAGATGCCAAG...TGAACCGTTGTCCACCATTAGTTTCTGTAAGTCTAAAATGAAGCTTTCAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CCA 90 bp AGTACTGAAAGCTTCATTTTAGACTTACAGAAACTAATGGTGGACAACGGTTCAGCCCGTCCACCTTCTTaGACTTCTAACTTATTCAAA +
Preference number: 4 (lower is better)
Translates to: STESFILDLQKLMVDNGSARPPS*TSNLFK
Trigger: TTTGAATAAGTTAGAAGTCCAAGAAGGTGGACGGGC...TGAACCGTTGTCCACCATTAGTTTCTGTAAGTCTAAAATGAAGCTTTCAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR TCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTGCTGAGGACTCTTGGTaGCTTTATATTGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSIAEDSW*LYIGRH
Trigger: ATGTCTTCCAATATAAAGTCACCAAGAGTCCTCAGC...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR GCA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTTACCACACTTTCCCATaGCTCAAATCTGACAGAGTA +
Preference number: 4 (lower is better)
Translates to: VDNGSSRQFKYKFAITSIYHTFP*LKSDRV
Trigger: TACTCTGTCAGATTTGAGGCATGGGAAAGTGTGGTA...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAATCTGACCCCTCCCTGTaGGCCCAGACCTGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LARDHCGRPRSARYGTHQSDPSL*AQTCGR
Trigger: TCTGCCACAGGTCTGGGCCAACAGGGAGGGGTCAGA...TTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGAGAGCCAGATGCCCGTaGCTGGGAGGAGTGACCCAG +
Preference number: 5 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQRARCP*LGGVTQ
Trigger: CTGGGTCACTCCTCCCAGCAACGGGCATCTGGCTCT...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp CAGATGCCCGTTGCTGGGAGGAGTGACCCAGTAGACCAAGTCCTGTaGGGAAGAGTCCCCATCTCCTGCACACAGGTCCCCTCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: QMPVAGRSDPVDQVL*GRVPISCTQVPSGH
Trigger: GTGACCAGAGGGGACCTGTGTGCAGGAGATGGGGACTCTTCCCCACAGGACTTGGTCTACTGGGTCACTCCTCCCAGCAACGGGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp TCATCCAGGCCACCCATGAACAGGGGGCCTTCGGATACAAACGCTTaGCTTTGCAGAGGCAGCCCCGCCCTTTCCCTGTGTTCATCCACC +
Preference number: 5 (lower is better)
Translates to: SSRPPMNRGPSDTNA*LCRGSPALSLCSST
Trigger: GGTGGATGAACACAGGGAAAGGGCGGGGCTGCCTCTGCAAAGCCAAGCGTTTGTATCCGAAGGCCCCCTGTTCATGGGTGGCCTGGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 90 bp GGTTTGTCGACAGAGCTTGGCCATGTCAGGATCCAAGTTCACCCATaGGTCCCAAGGAGCACATTTCTCCACAGGCTCCGCCCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: GLSTELGHVRIQVHP*VPRSTFLHRLRPQR
Trigger: CCTCTGGGGGCGGAGCCTGTGGAGAAATGTGCTCCTTGGGACGCATGGGTGAACTTGGATCCTGACATGGCCAAGCTCTGTCGACAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGCCTGCCTTGTCATCATaGGTCACGGCTCTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGPALSS*VTALRS
Trigger: TGACCTGAGAGCCGTGACCAATGATGACAAGGCAGG...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CGGCACCTCCTGCTGACTCACCGTGAGGGTGAATCTCCCATGAAAAGCACCCACCCTGCCTTGTCATCATaGGTCACGGCTCTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RHLLLTHREGESPMKSTHPALSS*VTALRS
Trigger: TGACCTGAGAGCCGTGACCAATGATGACAAGGCAGG...GTGGGTGCTTTTCATGGGAGATTCACCCTCACGGTGAGTCAGCAGGAGGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 90 bp CCCTGGTGGGAGAGACCTTGGCATCTATATTTGGCTCTTTGCCACTaGGTTGACCCCAGGAATCTGTCCCCTGCCATCTGCCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: PWWERPWHLYLALCH*VDPRNLSPAICPGS
Trigger: TGACCCAGGGCAGATGGCAGGGGACAGATTCCTGGGGTCAACTCAGTGGCAAAGAGCCAAATATAGATGCCAAGGTCTCTCCCACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 90 bp CATGGCTCCCCCGGAAAGGGACTCCCCCACTTTGGTGGCAGCATATaGCCAAATGACCCTGGTGGGAGAGACCTTGGCATCTATATTTGG +
Preference number: 5 (lower is better)
Translates to: HGSPGKGLPHFGGSI*PNDPGGRDLGIYIW
Trigger: CCAAATATAGATGCCAAGGTCTCTCCCACCAGGGTCATTTGGCCATATGCTGCCACCAAAGTGGGGGAGTCCCTTTCCGGGGGAGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGGTTCTGTTTCCTGCCTaGTCATCATTGGTCACGGCT +
Preference number: 5 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGVLFPA*SSLVTA
Trigger: AGCCGTGACCAATGATGACAAGGCAGGAAACAGAAC...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AACTGTGGGGGACCTTCCTGTGCCCATCAGGAGCTGTTCTCCAAAGCTCACTACAAGGCTGCACTGTATTaGCACGCAGCCGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: NCGGPSCAHQELFSKAHYKAALY*HAAGSV
Trigger: GACAGAGCCGGCTGCGTGCAAATACAGTGCAGCCTT...GTAGTGAGCTTTGGAGAACAGCTCCTGATGGGCACAGGAAGGTCCCCCACAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR CAA 90 bp CAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCAATCCAGTGGCCCTATaGTCACTTCCCAGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: QGTTVEGPGVQGTALTNSNPVAL*SLPREA
Trigger: TGCTTCTCTGGGAAGTGACAATAGGGCCACTGGATT...GCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGGTCTGTTCTGACATCTaGGTTTGTGGTGACGCTCAG +
Preference number: 5 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGVCSDI*VCGDAQ
Trigger: CTGAGCGTCACCACAAACCAAGATGTCAGAACAGAC...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp CAGCTCCGCTGGAGGGGAAGATGCTGTGAATGTGAAGGAGTCTTCTaGGGCCCACCCCGTGCTCTCAAGATCCACATGCTGGTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: QLRWRGRCCECEGVF*GPPRALKIHMLVEY
Trigger: ATACTCTACCAGCATGTGGATCTTGAGAGCACGGGGTGGGCCTCAGAAGACTCCTTCACATTCACAGCATCTTCCCCTCCAGCGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078163.14
ENSMUST00000135096.2
ENSMUST00000136755.10
CDS TCA 90 bp CCCCGGAAAGGGACTCCCCCACTTTGGTGGCAGCATATGGCCAAATaGCCCTGGTGGGAGAGACCTTGGCATCTATATTTGGCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PRKGTPPLWWQHMAK*PWWERPWHLYLALC
Trigger: GCAAAGAGCCAAATATAGATGCCAAGGTCTCTCCCACCAGGGTCATTTGGCCATATGCTGCCACCAAAGTGGGGGAGTCCCTTTCCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 90 bp ACTGGAGCCTCGTCGTTCACAGACTCAACAGTCACAAACAGGGTCTaGGGTGGACTCTGCTTGCCAAGCTCAGAGCTGTTCGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: TGASSFTDSTVTNRV*GGLCLPSSELFARM
Trigger: CATCCTGGCGAACAGCTCTGAGCTTGGCAAGCAGAGTCCACCTCAGACCCTGTTTGTGACTGTTGAGTCTGTGAACGACGAGGCTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 90 bp AATAAGGGGTGTCACCGTGACCGTGGGAATGGCTCCACTCCTCTCTaGTCTAGAGCCTGTGGATGGGGACTTCAGGTTTGTCTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: NKGCHRDRGNGSTPL*SRACGWGLQVCLWL
Trigger: CAGCCAAAGACAAACCTGAAGTCCCCATCCACAGGCTCTAGAGCAGAGAGGAGTGGAGCCATTCCCACGGTCACGGTGACACCCCTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 90 bp CCAAGTAGCAGTCTTCCTCTCTTAGGTGGAATCAGTAGCTTGAAATaGAGTCCCCTCTCAGGTGCTGCCACACTCCCTGCTGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PSSSLPLLGGISSLK*SPLSGAATLPAAAC
Trigger: GCAGGCTGCAGCAGGGAGTGTGGCAGCACCTGAGAGGGGACTCCATTTCAAGCTACTGATTCCACCTAAGAGAGGAAGACTGCTACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp TCTGTAGACGTGTGCTCAGAGTCAAGACTTCTGACCCCTCCCTGTTaGCCCAGACCTGTGGCAGAGGCCAGAAGGATGAATTCATCCCAC +
Preference number: 5 (lower is better)
Translates to: SVDVCSESRLLTPPC*PRPVAEARRMNSSH
Trigger: GTGGGATGAATTCATCCTTCTGGCCTCTGCCACAGGTCTGGGCCAACAGGGAGGGGTCAGAAGTCTTGACTCTGAGCACACGTCTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp GGCATCACATCTGCACCCGCGATGCCGTCTTCTGCTGTGGATATTTaGAGGTATCCGTGTACGGGTGGAGTTCTGACTGTGAACACTGCC +
Preference number: 5 (lower is better)
Translates to: GITSAPAMPSSAVDI*RYPCTGGVLTVNTA
Trigger: GGCAGTGTTCACAGTCAGAACTCCACCCGTACACGGATACCTCCAAATATCCACAGCAGAAGACGGCATCGCGGGTGCAGATGTGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp AGCCTCGTCGTTCACAGACTCAACAGTCACAAACAGGGTCTGAGGTaGACTCTGCTTGCCAAGCTCAGAGCTGTTCGCCAGGATGGTGAG +
Preference number: 5 (lower is better)
Translates to: SLVVHRLNSHKQGLR*TLLAKLRAVRQDGE
Trigger: CTCACCATCCTGGCGAACAGCTCTGAGCTTGGCAAGCAGAGTCCACCTCAGACCCTGTTTGTGACTGTTGAGTCTGTGAACGACGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACTGGTCAATGGAACGTaGAGAAAAGGTCCTAACTGG +
Preference number: 5 (lower is better)
Translates to: LARDHCGRPRSARYGTHQLVNGT*RKGPNW
Trigger: CCAGTTAGGACCTTTTCTCAACGTTCCATTGACCAG...TTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGGCCATGTTTTGGGGGTaGCACGATGTGGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGAMFWG*HDVEFK
Trigger: TTTGAATTCCACATCGTGCAACCCCCAAAACATGGC...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp GTGGGAGAGACCTTGGCATCTATATTTGGCTCTTTGCCACTGAGTTaGCCCCAGGAATCTGTCCCCTGCCATCTGCCCTGGGTCAGATTC +
Preference number: 5 (lower is better)
Translates to: VGETLASIFGSLPLS*PQESVPCHLPWVRF
Trigger: GAATCTGACCCAGGGCAGATGGCAGGGGACAGATTCCTGGGGTCAACTCAGTGGCAAAGAGCCAAATATAGATGCCAAGGTCTCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 90 bp CCATCTGTCACAAAAATCAGGAACCGAGCGAAATCTGGACCGTGGTaGCTGAAGAGCACACGCCCTTCCCGTAGGTCCTCTTGTCTGAAC +
Preference number: 5 (lower is better)
Translates to: PSVTKIRNRAKSGPW*LKSTRPSRRSSCLN
Trigger: GTTCAGACAAGAGGACCTACGGGAAGGGCGTGTGCTCTTCAGGCACCACGGTCCAGATTTCGCTCGGTTCCTGATTTTTGTGACAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 90 bp GAAGTTCAGAGTGGGCATCACATCTGCACCCGCGATGCCGTCTTCTaGTGTGGATATTTGGAGGTATCCGTGTACGGGTGGAGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: EVQSGHHICTRDAVF*CGYLEVSVYGWSSD
Trigger: GTCAGAACTCCACCCGTACACGGATACCTCCAAATATCCACAGCAGAAGACGGCATCGCGGGTGCAGATGTGATGCCCACTCTGAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp ACACCATCTGTCACAAAAATCAGGAACCGAGCGAAATCTGGACCGTaGTGCCTGAAGAGCACACGCCCTTCCCGTAGGTCCTCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: TPSVTKIRNRAKSGP*CLKSTRPSRRSSCL
Trigger: CAGACAAGAGGACCTACGGGAAGGGCGTGTGCTCTTCAGGCACCACGGTCCAGATTTCGCTCGGTTCCTGATTTTTGTGACAGATGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp AGTACTGGTTGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTTaGCCATGTCAGGATCCAAGTTCACCCATGCGTCCCAAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: STGCVSVRGWFVDRA*PCQDPSSPMRPKEH
Trigger: GTGCTCCTTGGGACGCATGGGTGAACTTGGATCCTGACATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AAACTGTGGGGGACCTTCCTGTGCCCATCAGGAGCTGTTCTCCAAAGCTCACTACCTGCCTTGTCATCATaGGTCACGGCTCTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: KLWGTFLCPSGAVLQSSLPALSS*VTALRS
Trigger: TGACCTGAGAGCCGTGACCAATGATGACAAGGCAGG...TAGTGAGCTTTGGAGAACAGCTCCTGATGGGCACAGGAAGGTCCCCCACAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR CAA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGTTCGCTCACCAGACATaGGGTAAAAGTGGAAACATC +
Preference number: 5 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQFAHQT*GKSGNI
Trigger: GATGTTTCCACTTTTACCCAATGTCTGGTGAGCGAA...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTGGGCTGTGAGTGGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGACCAGCTGCCCTTGGTaGATGTCTGTCTGGGTGAAC +
Preference number: 5 (lower is better)
Translates to: LGCEWALCVTTPNGQLSLTSCPW*MSVWVN
Trigger: GTTCACCCAGACAGACATCAACCAAGGGCAGCTGGT...CAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGGGACTCCCCCACTTaGGTGGCAGCATATGGCCAA +
Preference number: 5 (lower is better)
Translates to: VPIHSKWSVTARDGGGEERDSPT*VAAYGQ
Trigger: TTGGCCATATGCTGCCACCAAAGTGGGGGAGTCCCT...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTGGCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAAAGAAAGGAGGATTTCTaGCCCCGTACCCATGTTTAT +
Preference number: 5 (lower is better)
Translates to: LARDHCGRPRSARYGTHQRKEDF*PRTHVY
Trigger: ATAAACATGGGTACGGGGCAAGAAATCCTCCTTTCT...TTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp CTGTCTGGACATAGAGGACATGGCCATCATCAACATCTTGCTGGGTaGAGTTCAGAGTGGGCATCACATCTGCACCCGCGATGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: LSGHRGHGHHQHLAG*SSEWASHLHPRCRL
Trigger: AAGACGGCATCGCGGGTGCAGATGTGATGCCCACTCTGAACTTCACCCAGCAAGATGTTGATGATGGCCATGTCCTCTATGTCCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp CACAGGTCCCCTCTGGTCACCTCAGTGACAGAATTCACCCACACCTaGAGGATGTTATTGGCTGTTACTACTGGAGCCTCGTCGTTCACA +
Preference number: 5 (lower is better)
Translates to: HRSPLVTSVTEFTHT*RMLLAVTTGASSFT
Trigger: TGTGAACGACGAGGCTCCAGTAGTAACAGCCAATAACATCCTCCAGGTGTGGGTGAATTCTGTCACTGAGGTGACCAGAGGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AACTGTGGGGGACCTTCCTGTGCCCATCAGGAGCTGTTCTCCAAAGCTCACTACGTTCTGTTTCCTGCCTaGTCATCATTGGTCACGGCT +
Preference number: 5 (lower is better)
Translates to: NCGGPSCAHQELFSKAHYVLFPA*SSLVTA
Trigger: AGCCGTGACCAATGATGACAAGGCAGGAAACAGAAC...GTAGTGAGCTTTGGAGAACAGCTCCTGATGGGCACAGGAAGGTCCCCCACAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR CAA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAACCAGCTCACCATCAGTaGCTCTTAGAGCAACTCGAG +
Preference number: 5 (lower is better)
Translates to: HSKWSVTARDGGGEESGKPAHHQ*LLEQLE
Trigger: CTCGAGTTGCTCTAAGAGCAACTGATGGTGAGCTGG...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp GCAAGGGACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGACATACAGTCCAGTGTaGGTTATAGTGACATGTGTC +
Preference number: 5 (lower is better)
Translates to: ARDHCGRPRSARYGTHQQTYSPV*VIVTCV
Trigger: GACACATGTCACTATAACCAACACTGGACTGTATGT...CTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGTCCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAAGTGAGATTCTGCACCTaGAGAGGAATCCACTTGGGG +
Preference number: 5 (lower is better)
Translates to: HSKWSVTARDGGGEESGKVRFCT*RGIHLG
Trigger: CCCCAAGTGGATTCCTCTCAAGGTGCAGAATCTCAC...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp GTTACACCCCAGCGACACCTCAGACACCTTCTTAAAGCCAGGGTATaGCCTAAGGGACGTAAGGATCTCCCTCTGGTTAAACGCCACATC +
Preference number: 5 (lower is better)
Translates to: VTPQRHLRHLLKARV*PKGRKDLPLVKRHI
Trigger: GATGTGGCGTTTAACCAGAGGGAGATCCTTACGTCCCTTAGGTCATACCCTGGCTTTAAGAAGGTGTCTGAGGTGTCGCTGGGGTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp CAGAGATCTGCTAGTGTCAGTAAGCGCTGGCTGTCCCGCACAACGTaGAAGATCTTATCCACCACACGCACCGGCTTCTCATCATTCTTC +
Preference number: 5 (lower is better)
Translates to: QRSASVSKRWLSRTT*KILSTTRTGFSSFF
Trigger: GAAGAATGATGAGAAGCCGGTGCGTGTGGTGGATAAGATCTTTCACGTTGTGCGGGACAGCCAGCGCTTACTGACACTAGCAGATCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 90 bp AAATGGAGTCCCCTCTCAGGTGCTGCCACACTCCCTGCTGCAGCCTaGAGATGGCCAGAATCCAATACTTTCTTGTTTGCGTTGCTAATC +
Preference number: 5 (lower is better)
Translates to: KWSPLSGAATLPAAA*RWPESNTFLFALLI
Trigger: GATTAGCAACGCAAACAAGAAAGTATTGGATTCTGGCCATCTGCAGGCTGCAGCAGGGAGTGTGGCAGCACCTGAGAGGGGACTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp TTCTTAAAGCCAGGGTATGACCTAAGGGACGTAAGGATCTCCCTCTaGTTAAACGCCACATCCTCCATGCATCCCCGGAAGTTGGGGATC +
Preference number: 5 (lower is better)
Translates to: FLKPGYDLRDVRISL*LNATSSMHPRKLGI
Trigger: GATCCCCAACTTCCGGGGATGCATGGAGGATGTGGCGTTTAACCAGAGGGAGATCCTTACGTCCCTTAGGTCATACCCTGGCTTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp AGTCCCCTCTCAGGTGCTGCCACACTCCCTGCTGCAGCCTGCAGATaGCCAGAATCCAATACTTTCTTGTTTGCGTTGCTAATCTCTAGA +
Preference number: 5 (lower is better)
Translates to: SPLSGAATLPAAACR*PESNTFLFALLISR
Trigger: TCTAGAGATTAGCAACGCAAACAAGAAAGTATTGGATTCTGGCCATCTGCAGGCTGCAGCAGGGAGTGTGGCAGCACCTGAGAGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp ACCACTGTGGAAGGCCCAGGAGTGCAAGGTACGGCACTCACCAACAGCACTGGGATGCTCAATCCTCTGTaGACTTCTAAGCTAATGATC +
Preference number: 5 (lower is better)
Translates to: TTVEGPGVQGTALTNSTGMLNPL*TSKLMI
Trigger: GATCATTAGCTTAGAAGTCAACAGAGGATTGAGCAT...CCCAGTGCTGTTGGTGAGTGCCGTACCTTGCACTCCTGGGCCTTCCACAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp TGTGGGGGACCTTCCTGTGCCCATCAGGAGCTGTTCTCCAAAGCTCACTACGGATTCGCTCACCAGACATaGGGTAAAAGTGGAAACATC +
Preference number: 5 (lower is better)
Translates to: CGGPSCAHQELFSKAHYGFAHQT*GKSGNI
Trigger: GATGTTTCCACTTTTACCCAATGTCTGGTGAGCGAA...TCCGTAGTGAGCTTTGGAGAACAGCTCCTGATGGGCACAGGAAGGTCCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS-3UTR CAA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGTTCGGATACAAACGCTaGGCTTTGCAGAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKFGYKR*ALQRQP
Trigger: GGGCTGCCTCTGCAAAGCCAAGCGTTTGTATCCGAA...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTGGGCTGTGAGTGGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGGGTGGAATCAGTAGCTaGAAATGGAGTCCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: LGCEWALCVTTPNGQLSLGGISS*KWSPLS
Trigger: TGAGAGGGGACTCCATTTCAAGCTACTGATTCCACC...CAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp ACTGCTTCCAATGAGGTCCCACTGCTCAGCAGTACCTTAGTCCAGTTTAATTCTCTGCCAGGAGTGGACTaGAGAGCCAGATGCCCGTTG +
Preference number: 5 (lower is better)
Translates to: TASNEVPLLSSTLVQFNSLPGVD*RARCPL
Trigger: CAACGGGCATCTGGCTCTCAAGTCCACTCCTGGCAG...AGAATTAAACTGGACTAAGGTACTGCTGAGCAGTGGGACCTCATTGGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp CAATCAGCAAGTGGCCGCTTTGGAGGGGCTGTGTCATTCTGTAGATaGTCTGGAGGCTCCTACCATTGGTCACTGCTGAGAGATGAGTAT +
Preference number: 5 (lower is better)
Translates to: QSASGRFGGAVSFCR*SGGSYHWSLLRDEY
Trigger: ATACTCATCTCTCAGCAGTGACCAATGGTAGGAGCCTCCAGATCATCTACAGAATGACACAGCCCCTCCAAAGCGGCCACTTGCTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 90 bp GATGTTCAGTGTCTGCTCCGTCAAGTTGCACTCCGTTGTAAACAGTaGGACCCTCAGCTGATCTTCGGAGGCTGTGAGATTGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: DVQCLLRQVALRCKQ*DPQLIFGGCEIGHV
Trigger: CACATGACCAATCTCACAGCCTCCGAAGATCAGCTGAGGGTCTCACTGTTTACAACGGAGTGCAACTTGACGGAGCAGACACTGAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 90 bp CGTTGGATCCCCGGTGCTGAATTTGGCCAAACTGAGGTGGATGTGTaGTGTCATAGAGAGTGTCCAGCTCATGTTGTCCACCATTCACCT +
Preference number: 5 (lower is better)
Translates to: RWIPGAEFGQTEVDV*CHRECPAHVVHHSP
Trigger: AGGTGAATGGTGGACAACATGAGCTGGACACTCTCTATGACATCACACATCCACCTCAGTTTGGCCAAATTCAGCACCGGGGATCCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp CATCATGAACATAGACCAGCCTCCCACTCACTATGTCTTCGTCTGTaGATCCAGTGGCCCTATTGTCACTTCCCAGAGAAGCAGACGAGC +
Preference number: 5 (lower is better)
Translates to: HHEHRPASHSLCLRL*IQWPYCHFPEKQTS
Trigger: GCTCGTCTGCTTCTCTGGGAAGTGACAATAGGGCCACTGGATTCACAGACGAAGACATAGTGAGTGGGAGGCTGGTCTATGTTCATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp GAGGTATCCGTGTACGGGTGGAGTTCTGACTGTGAACACTGCCTCTaGAGGAATATCTTCTTCATTCCCAGCCTGGAGCTTTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: EVSVYGWSSDCEHCL*RNIFFIPSLELSSA
Trigger: AGCAGAGGAAAGCTCCAGGCTGGGAATGAAGAAGATATTCCTTCAGAGGCAGTGTTCACAGTCAGAACTCCACCCGTACACGGATACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 90 bp ATCATCAACATCTTGCTGGGTGAAGTTCAGAGTGGGCATCACATCTaGACCCGCGATGCCGTCTTCTGCTGTGGATATTTGGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: IINILLGEVQSGHHI*TRDAVFCCGYLEVS
Trigger: GGATACCTCCAAATATCCACAGCAGAAGACGGCATCGCGGGTGCAGATGTGATGCCCACTCTGAACTTCACCCAGCAAGATGTTGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp AGTCTTCCAGAATCCAAATCCTCCTGCCCAAAGCTGTTGACCACCTaGTTTTCAATCAGCAAGTGGCCGCTTTGGAGGGGCTGTGTCATT +
Preference number: 5 (lower is better)
Translates to: SLPESKSSCPKLLTT*FSISKWPLWRGCVI
Trigger: AATGACACAGCCCCTCCAAAGCGGCCACTTGCTGATTGAAAACCAGGTGGTCAACAGCTTTGGGCAGGAGGATTTGGATTCTGGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 90 bp AGTCGGTTTTCCCGGCTGCAAGGAAGAGTAAGCCTTGTGGCTTGCTaGTTTGAAATCTTAACTGAAGCGACAGCTCAGGGAAAACCTCGG +
Preference number: 5 (lower is better)
Translates to: SRFSRLQGRVSLVAC*FEILTEATAQGKPR
Trigger: CCGAGGTTTTCCCTGAGCTGTCGCTTCAGTTAAGATTTCAAACCAGCAAGCCACAAGGCTTACTCTTCCTTGCAGCCGGGAAAACCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp CTGTACCACGGAGACCCTCACTTGTGCACCCAGCCGAAATGTCTCTaGAGACAAGAGCATCCCGTAATGCTCTCTTTTCCAAATTGGCTT +
Preference number: 5 (lower is better)
Translates to: LYHGDPHLCTQPKCL*RQEHPVMLSFPNWL
Trigger: AAGCCAATTTGGAAAAGAGAGCATTACGGGATGCTCTTGTCTCCAGAGACATTTCGGCTGGGTGCACAAGTGAGGGTCTCCGTGGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp ACTTTGAATTTTCAGAGGAGAACTGGGAATGGTCGTGGGAGAGGATaGCTCTGGTGGAAACAGGTCTTCCCCTGCCACAGAAGGATCTGT +
Preference number: 5 (lower is better)
Translates to: TLNFQRRTGNGRGRG*LWWKQVFPCHRRIC
Trigger: ACAGATCCTTCTGTGGCAGGGGAAGACCTGTTTCCACCAGAGCCATCCTCTCCCACGACCATTCCCAGTTCTCCTCTGAAAATTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp CTTCACAGACAAGTTGTTCCGAGTGATGAGAATGGTACCACCTTGTaGTACCACCACGCCAGTCCTATCAGCCACTTCAAAGTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: LHRQVVPSDENGTTL*YHHASPISHFKVPR
Trigger: CCTTGGGACTTTGAAGTGGCTGATAGGACTGGCGTGGTGGTACCACAAGGTGGTACCATTCTCATCACTCGGAACAACTTGTCTGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGACAGTGTTCTGGCCTaGTGGGAGAAGCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGDSVLA*WEKQVC
Trigger: ACAGACCTGCTTCTCCCACAAGGCCAGAACACTGTC...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp GTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGCTGGTGGGAGAGACCTaGGCATCTATATTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: VPIHSKWSVTARDGGGEELVGET*ASIFGS
Trigger: AGAGCCAAATATAGATGCCAAGGTCTCTCCCACCAG...CTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTGGGCTGTGAGTGGGCCCTGTGTGTAACTACACCTAATGGACAGCTTTCCTTGGTCCACACGAAGTCTTaGCTCAGAAAGGAGGATTTC +
Preference number: 5 (lower is better)
Translates to: LGCEWALCVTTPNGQLSLVHTKS*LRKEDF
Trigger: GAAATCCTCCTTTCTGAGCAAAGACTTCGTGTGGAC...CAAGGAAAGCTGTCCATTAGGTGTAGTTACACACAGGGCCCACTCACAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp GTTCTGTTTCCTGCCTTGTCATCATTGGTCACGGCTCTCAGGTCATaGGACGAAAGTGGCTTTGTGGAACCTGGGAAGATGCTCAATCCT +
Preference number: 5 (lower is better)
Translates to: VLFPALSSLVTALRS*DESGFVEPGKMLNP
Trigger: AGGATTGAGCATCTTCCCAGGTTCCACAAAGCCACTTTCGTCTCATGACCTGAGAGCCGTGACCAATGATGACAAGGCAGGAAACAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 90 bp TGTCATTCTGTAGATGATCTGGAGGCTCCTACCATTGGTCACTGCTaGGAGATGAGTATTGGTGATGGGGACAGTGTTCTGGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: CHSVDDLEAPTIGHC*EMSIGDGDSVLALW
Trigger: CCACAAGGCCAGAACACTGTCCCCATCACCAATACTCATCTCTCAGCAGTGACCAATGGTAGGAGCCTCCAGATCATCTACAGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 90 bp TTTGCTATAACCCACAACAAAGGCTGCACCCTGATGTTCAGTGTCTaGTCCGTCAAGTTGCACTCCGTTGTAAACAGTGAGACCCTCAGC +
Preference number: 5 (lower is better)
Translates to: FAITHNKGCTLMFSV*SVKLHSVVNSETLS
Trigger: GCTGAGGGTCTCACTGTTTACAACGGAGTGCAACTTGACGGAGCAGACACTGAACATCAGGGTGCAGCCTTTGTTGTGGGTTATAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 90 bp TTCTTCAACTCAACAGAAACGCTGACTTTGATCTCTGTAGACGTGTaGTCAGAGTCAAGACTTCTGACCCCTCCCTGTTGGCCCAGACCT +
Preference number: 5 (lower is better)
Translates to: FFNSTETLTLISVDV*SESRLLTPPCWPRP
Trigger: AGGTCTGGGCCAACAGGGAGGGGTCAGAAGTCTTGACTCTGAGCACACGTCTACAGAGATCAAAGTCAGCGTTTCTGTTGAGTTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp TGCCTTGTCATCATTGGTCACGGCTCTCAGGTCATGAGACGAAAGTaGCTTTGTGGAACCTGGGAAGATGCTCAATCCTCTGTTGACTTC +
Preference number: 5 (lower is better)
Translates to: CLVIIGHGSQVMRRK*LCGTWEDAQSSVDF
Trigger: GAAGTCAACAGAGGATTGAGCATCTTCCCAGGTTCCACAAAGCCACTTTCGTCTCATGACCTGAGAGCCGTGACCAATGATGACAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 90 bp TCGGATCTGACTCTGGTCAATGGAACGTTGAGAAAAGGTCCTAACTaGTTTCCACTCTCCGTTGGATCCCCGGTGCTGAATTTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: SDLTLVNGTLRKGPN*FPLSVGSPVLNLAK
Trigger: TTTGGCCAAATTCAGCACCGGGGATCCAACGGAGAGTGGAAACCAGTTAGGACCTTTTCTCAACGTTCCATTGACCAGAGTCAGATCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAATGGTGGACTTATTCTTaGGGTTTGGCCAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: HSKWSVTARDGGGEESGKWWTYS*GLAKQQ
Trigger: TTGCTGTTTGGCCAAACCCAAAGAATAAGTCCACCA...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGGGATGGGCTTCTATCTaGTATGAACCACACCTGAGC +
Preference number: 5 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKGWASI*YEPHLS
Trigger: GCTCAGGTGTGGTTCATACAAGATAGAAGCCCATCC...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAGGAGAGCGGAAAAATACTTGCTTGCAATTaGGAGGTGATCCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: HSKWSVTARDGGGEESGKILACN*EVILQK
Trigger: CTTCTGCAGGATCACCTCCAAATTGCAAGCAAGTAT...TTTTCCGCTCTCCTCCCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp CTCCCTGTGGTAATGTTTCTCTCTCCAACCATAATGGTTCCATGGTaGGGAAGAGCCGTAACCTGGAACCAGATTTCATGGGAAGAACGC +
Preference number: 5 (lower is better)
Translates to: LPVVMFLSPTIMVPW*GRAVTWNQISWEER
Trigger: GCGTTCTTCCCATGAAATCTGGTTCCAGGTTACGGCTCTTCCTCACCATGGAACCATTATGGTTGGAGAGAGAAACATTACCACAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 90 bp TGTTCATCCACCATGATGTCCACGTGCCTCCCGGTGACTTTAAGCTaGACAACGTGCCACTTGTTGTCACTAACCAAGCTGAATGAAGAG +
Preference number: 5 (lower is better)
Translates to: CSSTMMSTCLPVTLS*TTCHLLSLTKLNEE
Trigger: CTCTTCATTCAGCTTGGTTAGTGACAACAAGTGGCACGTTGTTCAGCTTAAAGTCACCGGGAGGCACGTGGACATCATGGTGGATGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 90 bp CTCTGTCCTAAGCTGGTGAGCCACTCTGTTGGTCACTTTCAAGTTTaGTATAACCCACAACAAAGGCTGCACCCTGATGTTCAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: LCPKLVSHSVGHFQV*YNPQQRLHPDVQCL
Trigger: CAGACACTGAACATCAGGGTGCAGCCTTTGTTGTGGGTTATAGCAAACTTGAAAGTGACCAACAGAGTGGCTCACCAGCTTAGGACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 90 bp CGCAGCTCCAACGAATGCCAAGCCAAATCGTCCACACGAAGTCTTTaGTCAGAAAGGAGGATTTCTTGCCCCGTACCCATGTTTATTTTC +
Preference number: 5 (lower is better)
Translates to: RSSNECQAKSSTRSL*SERRISCPVPMFIF
Trigger: GAAAATAAACATGGGTACGGGGCAAGAAATCCTCCTTTCTGAGCAAAGACTTCGTGTGGACGATTTGGCTTGGCATTCGTTGGAGCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 90 bp TTCACTGGAAGGACAGTAATGTTAAACACATGTGGAACAGGAGCCTaGAGCTGGGACAGCAGTGCCTGCTTGCTACTAGAAAAAGCCCAA +
Preference number: 5 (lower is better)
Translates to: FTGRTVMLNTCGTGA*SWDSSACLLLEKAQ
Trigger: TTGGGCTTTTTCTAGTAGCAAGCAGGCACTGCTGTCCCAGCTGCAGGCTCCTGTTCCACATGTGTTTAACATTACTGTCCTTCCAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 90 bp CTCAGTTTTACTGGTTTTCCTTCTTCAACTATAAGGCTCCTGCTGTaGAGAATCGGAGTGGAACGTTGGCGACCTTCTGACGACACTTGG +
Preference number: 5 (lower is better)
Translates to: LSFTGFPSSTIRLLL*RIGVERWRPSDDTW
Trigger: CCAAGTGTCGTCAGAAGGTCGCCAACGTTCCACTCCGATTCTGCACAGCAGGAGCCTTATAGTTGAAGAAGGAAAACCAGTAAAACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp AGGGGTGATGGTGATGTTGAACATCTCTTCCAGAAAGCCAGCCTCTaGCTTGCTGGTGGACTTATTCTTTGGGTTTGGCCAAACAGCAAA +
Preference number: 5 (lower is better)
Translates to: RGDGDVEHLFQKASL*LAGGLILWVWPNSK
Trigger: TTTGCTGTTTGGCCAAACCCAAAGAATAAGTCCACCAGCAAGCCAGAGGCTGGCTTTCTGGAAGAGATGTTCAACATCACCATCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 90 bp AGTCTGCCATGTTTTGGGGGTTGCACGATGTGGAATTCAAACTCATaGTCTGTTCTGACATCTTGGTTTGTGGTGACGCTCAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: SLPCFGGCTMWNSNS*SVLTSWFVVTLRLA
Trigger: AGCCAACCTGAGCGTCACCACAAACCAAGATGTCAGAACAGACCATGAGTTTGAATTCCACATCGTGCAACCCCCAAAACATGGCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGACCAGCTGCCCTTGGTaGATGTCTGTCTGGGTGAAC +
Preference number: 5 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPETSCPW*MSVWVN
Trigger: GTTCACCCAGACAGACATCAACCAAGGGCAGCTGGT...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGAAGCACCAGCTGCCCTaGGTTGATGTCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPEKHQLP*VDVCLG
Trigger: ACCCAGACAGACATCAACCAAGGGCAGCTGGTGCTT...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGCTCTTTGCCACTGAGTaGACCCCAGGAATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPELFATE*TPGICP
Trigger: GGGACAGATTCCTGGGGTCAACTCAGTGGCAAAGAG...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp GAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGCTCTTTGCCACTGAGTaGACCCCAGGAATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: ELIFVPIHSKWSVTARDGLFATE*TPGICP
Trigger: GGGACAGATTCCTGGGGTCAACTCAGTGGCAAAGAG...CCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp TCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTTGATCTTCGTAAGGGACTCCCCCACTTaGGTGGCAGCATATGGCCAA +
Preference number: 5 (lower is better)
Translates to: SLIRSAFLHRYNPELIFVRDSPT*VAAYGQ
Trigger: TTGGCCATATGCTGCCACCAAAGTGGGGGAGTCCCT...TACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 90 bp TGCAGAACTGTCAACCGCAGCCCTTTGGTCTTTAATTCTGGAGGCTaGTCATTCACAGGGGTGATGGTGATGTTGAACATCTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: CRTVNRSPLVFNSGG*SFTGVMVMLNISSR
Trigger: TCTGGAAGAGATGTTCAACATCACCATCACCCCTGTGAATGATCAGCCTCCAGAATTAAAGACCAAAGGGCTGCGGTTGACAGTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 90 bp ACTCTGTTGGTCACTTTCAAGTTTGCTATAACCCACAACAAAGGCTaGACCCTGATGTTCAGTGTCTGCTCCGTCAAGTTGCACTCCGTT +
Preference number: 5 (lower is better)
Translates to: TLLVTFKFAITHNKG*TLMFSVCSVKLHSV
Trigger: AACGGAGTGCAACTTGACGGAGCAGACACTGAACATCAGGGTGCAGCCTTTGTTGTGGGTTATAGCAAACTTGAAAGTGACCAACAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 90 bp TTCGAGGAGAATGAATTCACAGTCAAGACCCTCCAAATACTTGCTTaGAATTTGGAGGTGATCCTGCAGAAGTACCTTGGAGCCCCCTTC +
Preference number: 5 (lower is better)
Translates to: FEENEFTVKTLQILA*NLEVILQKYLGAPF
Trigger: GAAGGGGGCTCCAAGGTACTTCTGCAGGATCACCTCCAAATTGCAAGCAAGTATTTGGAGGGTCTTGACTGTGAATTCATTCTCCTCGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp TGTCTCTGGAGACAAGAGCATCCCGTAATGCTCTCTTTTCCAAATTaGCTTCTAAGGCTCGCAGGCATCCTTTCAGAGACATACCTCGAA +
Preference number: 5 (lower is better)
Translates to: CLWRQEHPVMLSFPN*LLRLAGILSETYLE
Trigger: TTCGAGGTATGTCTCTGAAAGGATGCCTGCGAGCCTTAGAAGCCAATTTGGAAAAGAGAGCATTACGGGATGCTCTTGTCTCCAGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp GGTTGCACGATGTGGAATTCAAACTCATGGTCTGTTCTGACATCTTaGTTTGTGGTGACGCTCAGGTTGGCTGTTGTTAGAAAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GCTMWNSNSWSVLTS*FVVTLRLAVVRKLS
Trigger: GGACAGCTTTCTAACAACAGCCAACCTGAGCGTCACCACAAACCAAGATGTCAGAACAGACCATGAGTTTGAATTCCACATCGTGCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp TCCAGTTTAATTCTTAACAGAGTGGCAGGTCCTGGCAAGGGACCACTGTGGAAGACTTTATCTCCCTCCTaGACAGAGGCTCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: SSLILNRVAGPGKGPLWKTLSPS*TEAPVF
Trigger: AAATACAGGAGCCTCTGTCAAGGAGGGAGATAAAGT...CTTCCACAGTGGTCCCTTGCCAGGACCTGCCACTCTGTTAAGAATTAAACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATAAGCACCAGCTGCCCTaGGTTGATGTCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PELIFVPIHSKWSVTARDKHQLP*VDVCLG
Trigger: ACCCAGACAGACATCAACCAAGGGCAGCTGGTGCTT...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 90 bp GAGTTTAGGGGACCTGACAACTGTAAATGTTACAGTTCTGTTTCCTaGCTTGTCATCATTGGTCACGGCTCTCAGGTCATGAGACGAAAG +
Preference number: 5 (lower is better)
Translates to: EFRGPDNCKCYSSVS*LVIIGHGSQVMRRK
Trigger: CTTTCGTCTCATGACCTGAGAGCCGTGACCAATGATGACAAGGCAGGAAACAGAACTGTAACATTTACAGTTGTCAGGTCCCCTAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078163.14
ENSMUST00000135096.2
ENSMUST00000136755.10
CDS GCA 90 bp TTTGCGTTGCTAATCTCTAGAGGAATATTTTTCAGAAGTGTCAACTaGAGCCACTGCACAGTCACAGGGAACAGGAGCTCTCTGCCTACT +
Preference number: 5 (lower is better)
Translates to: FALLISRGIFFRSVN*SHCTVTGNRSSLPT
Trigger: AGTAGGCAGAGAGCTCCTGTTCCCTGTGACTGTGCAGTGGCTGCAGTTGACACTTCTGAAAAATATTCCTCTAGAGATTAGCAACGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp GCGGTGTTTGCCGTCAGTCACACTAAAATAAAACACTCCCGAGGATaGGCTTCTATCTTGTATGAACCACACCTGAGCGTTATTGATGTC +
Preference number: 5 (lower is better)
Translates to: AVFAVSHTKIKHSRG*ASILYEPHLSVIDV
Trigger: GACATCAATAACGCTCAGGTGTGGTTCATACAAGATAGAAGCCCATCCTCGGGAGTGTTTTATTTTAGTGTGACTGACGGCAAACACCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 90 bp GAATTGTTGACCAGGAGTCTGCCATGTTTTGGGGGTTGCACGATGTaGAATTCAAACTCATGGTCTGTTCTGACATCTTGGTTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: ELLTRSLPCFGGCTM*NSNSWSVLTSWFVV
Trigger: CACCACAAACCAAGATGTCAGAACAGACCATGAGTTTGAATTCCACATCGTGCAACCCCCAAAACATGGCAGACTCCTGGTCAACAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTAGACAGTGTTCTGGCCTaGTGGGAGAAGCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: NLRRLHTHKYSINKLADVDSVLA*WEKQVC
Trigger: ACAGACCTGCTTCTCCCACAAGGCCAGAACACTGTC...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 90 bp TTTAAGCTGAACAACGTGCCACTTGTTGTCACTAACCAAGCTGAATaGAGAGAGTTGAGTTTTTGTTCCGCCCCTTCCTACGTGAGCCTT +
Preference number: 5 (lower is better)
Translates to: FKLNNVPLVVTNQAE*RELSFCSAPSYVSL
Trigger: AAGGCTCACGTAGGAAGGGGCGGAACAAAAACTCAACTCTCTTCATTCAGCTTGGTTAGTGACAACAAGTGGCACGTTGTTCAGCTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp ACTTGGAGCTTTCGACATAACCGTGCTTTGGCGGTTCGAGGAGAATaGATTCACAGTCAAGACCCTCCAAATACTTGCTTGCAATTTGGA +
Preference number: 5 (lower is better)
Translates to: TWSFRHNRALAVRGE*IHSQDPPNTCLQFG
Trigger: TCCAAATTGCAAGCAAGTATTTGGAGGGTCTTGACTGTGAATTCATTCTCCTCGAACCGCCAAAGCACGGTTATGTCGAAAGCTCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGTTGTCTCAAAGTGCTaGTCAATGACCAAGAGAACA +
Preference number: 5 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGVVSKC*SMTKRT
Trigger: TGTTCTCTTGGTCATTGACAAGCACTTTGAGACAAC...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATACCTGGAGGATGTTATaGGCTGTTACTACTGGAGCC +
Preference number: 5 (lower is better)
Translates to: PELIFVPIHSKWSVTARDTWRML*AVTTGA
Trigger: GGCTCCAGTAGTAACAGCCAATAACATCCTCCAGGT...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 90 bp GAAGAATTGATACCCAGATCCATAAAGTCCACATCTACTTCTATATaGCTTTGTCCCAGTAAGGCCCGTCCACCTTCTTGGACTTCTAAC +
Preference number: 5 (lower is better)
Translates to: EELIPRSIKSTSTSI*LCPSKARPPSWTSN
Trigger: GTTAGAAGTCCAAGAAGGTGGACGGGCCTTACTGGGACAAAGGCATATAGAAGTAGATGTGGACTTTATGGATCTGGGTATCAATTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTAGTTCTGTTTCCTGCCTaGTCATCATTGGTCACGGCT +
Preference number: 5 (lower is better)
Translates to: NLRRLHTHKYSINKLADVVLFPA*SSLVTA
Trigger: AGCCGTGACCAATGATGACAAGGCAGGAAACAGAAC...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp TCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGTTGATCTTCGTAGGGGTGATGGTGATGTaGAACATCTCTTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SLIRSAFLHRYNPELIFVGVMVM*NISSRK
Trigger: CTTTCTGGAAGAGATGTTCAACATCACCATCACCCC...TACGAAGATCAACTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp TTATACCCAGTACTGGTTGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTTACGGATGATCTCATATaGGATTTCATTTGGAGGACT +
Preference number: 5 (lower is better)
Translates to: LYPVLVVFQCGVGLSTELTDDLI*DFIWRT
Trigger: AGTCCTCCAAATGAAATCCAATATGAGATCATCCGT...AAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGGGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS-3UTR CAA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTAGGATGGGCTTCTATCTaGTATGAACCACACCTGAGC +
Preference number: 5 (lower is better)
Translates to: NLRRLHTHKYSINKLADVGWASI*YEPHLS
Trigger: GCTCAGGTGTGGTTCATACAAGATAGAAGCCCATCC...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATTGGTGGACTTATTCTTaGGGTTTGGCCAAACAGCAA +
Preference number: 5 (lower is better)
Translates to: PELIFVPIHSKWSVTARDWWTYS*GLAKQQ
Trigger: TTGCTGTTTGGCCAAACCCAAAGAATAAGTCCACCA...ATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTTCCCCGGTGCTGAATTaGGCCAAACTGAGGTGGATG +
Preference number: 5 (lower is better)
Translates to: VDNGSSRQFKYKFAITSISPVLN*AKLRWM
Trigger: CATCCACCTCAGTTTGGCCAAATTCAGCACCGGGGA...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp ATCTTCGTACCTATACACAGTAAGTGGTCAGTAACAGCAAGAGATGGGGGAGGGGAATCCAATACTTTCTaGTTTGCGTTGCTAATCTCT +
Preference number: 5 (lower is better)
Translates to: IFVPIHSKWSVTARDGGGESNTF*FALLIS
Trigger: AGAGATTAGCAACGCAAACAAGAAAGTATTGGATTC...CCCTCCCCCATCTCTTGCTGTTACTGACCACTTACTGTGTATAGGTACGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 90 bp ATTCTTTGGGTTTGGCCAAACAGCAAAGGTAAAATTATCAGCCAGTaGTTCGGAGTCGTCATGAAGATACGCGGCTCCAAATACATTAAC +
Preference number: 5 (lower is better)
Translates to: ILWVWPNSKGKIISQ*FGVVMKIRGSKYIN
Trigger: GTTAATGTATTTGGAGCCGCGTATCTTCATGACGACTCCGAATCACTGGCTGATAATTTTACCTTTGCTGTTTGGCCAAACCCAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACAAGCCAGCCTCTGGCTaGCTGGTGGACTTATTCTTT +
Preference number: 5 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHKPASG*LVDLFF
Trigger: AAAGAATAAGTCCACCAGCAAGCCAGAGGCTGGCTT...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AGTACTGAAAGCTTCATTTTAGACTTACAGAAACTAATGGTGGACAACGGTTCAAAGCCAGCCTCTGGCTaGCTGGTGGACTTATTCTTT +
Preference number: 5 (lower is better)
Translates to: STESFILDLQKLMVDNGSKPASG*LVDLFF
Trigger: AAAGAATAAGTCCACCAGCAAGCCAGAGGCTGGCTT...TGAACCGTTGTCCACCATTAGTTTCTGTAAGTCTAAAATGAAGCTTTCAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACCTGGTGGGAGAGACCTaGGCATCTATATTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHLVGET*ASIFGS
Trigger: AGAGCCAAATATAGATGCCAAGGTCTCTCCCACCAG...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AATGGACAGCTTTCCTTGATTCGAAGCGCATTCCTTCATCGTTATAACCCTGAGCAAAAAGCTGCCACTTaGAATTTTCAGAGGAGAACT +
Preference number: 5 (lower is better)
Translates to: NGQLSLIRSAFLHRYNPEQKAAT*NFQRRT
Trigger: AGTTCTCCTCTGAAAATTCAAAGTGGCAGCTTTTTG...CTCAGGGTTATAACGATGAAGGAATGCGCTTCGAATCAAGGAAAGCTGTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACAGGCCAAGCATCTATTaGAAGGAACCCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHRPSIY*KEPMSW
Trigger: CCAGCTCATGGGTTCCTTCAAATAGATGCTTGGCCT...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTACCTCCAAATACTTGCTaGCAATTTGGAGGTGATCCT +
Preference number: 5 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVPPNTC*QFGGDP
Trigger: AGGATCACCTCCAAATTGCAAGCAAGTATTTGGAGG...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 90 bp GAAGCCATTGTTGGGATGACGGATGATCTCATATTGGATTTCATTTaGAGGACTATCTATATCTTCTACATTGAGGATTTCAGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: EAIVGMTDDLILDFI*RTIYIFYIEDFRSH
Trigger: GTGGGACCTGAAATCCTCAATGTAGAAGATATAGATAGTCCTCCAAATGAAATCCAATATGAGATCATCCGTCATCCCAACAATGGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CATCGTTATAACCCTGAGTTGATCTTCGTACCTATACACAGTAAGTGGTCAGTAATGCTCAATCCTCTGTaGACTTCTAAGCTAATGATC +
Preference number: 5 (lower is better)
Translates to: HRYNPELIFVPIHSKWSVMLNPL*TSKLMI
Trigger: GATCATTAGCTTAGAAGTCAACAGAGGATTGAGCAT...TACTGACCACTTACTGTGTATAGGTACGAAGATCAACTCAGGGTTATAACGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp GTGGACAACGGTTCAAGTAGACAATTCAAATACAAATTTGCCATTACTTCCATTGGGGTGATGGTGATGTaGAACATCTCTTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: VDNGSSRQFKYKFAITSIGVMVM*NISSRK
Trigger: CTTTCTGGAAGAGATGTTCAACATCACCATCACCCC...AATGGAAGTAATGGCAAATTTGTATTTGAATTGTCTACTTGAACCGTTGTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AACCTGAGGAGACTCCACACACATAAATATTCCATAAACAAACTCGCCGATGTAACGGATGATCTCATATaGGATTTCATTTGGAGGACT +
Preference number: 5 (lower is better)
Translates to: NLRRLHTHKYSINKLADVTDDLI*DFIWRT
Trigger: AGTCCTCCAAATGAAATCCAATATGAGATCATCCGT...TACATCGGCGAGTTTGTTTATGGAATATTTATGTGTGTGGAGTCTCCTCAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACTCATTAGCTTCACTCTaGGAAACTTGGAGCTTTCGA +
Preference number: 5 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHSLASL*ETWSFR
Trigger: TCGAAAGCTCCAAGTTTCCAAGAGTGAAGCTAATGA...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp CTATATTACTCTTCACAGAAAAATCTGAATCATTTGTGCAAGCCTCAGTCTCACGCCTCTGAATTGAAGTaGTTAAGAACAGAAAACCTG +
Preference number: 5 (lower is better)
Translates to: LYYSSQKNLNHLCKPQSHASELK*LRTENL
Trigger: CAGGTTTTCTGTTCTTAACAACTTCAATTCAGAGGC...GTGAGACTGAGGCTTGCACAAATGATTCAGATTTTTCTGTGAAGAGTAATATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS-3UTR CAA 90 bp AGTACTGAAAGCTTCATTTTAGACTTACAGAAACTAATGGTGGACAACGGTTCACTTGGTGACTTTATATaGGAAGACATGATTATCCAG +
Preference number: 5 (lower is better)
Translates to: STESFILDLQKLMVDNGSLGDFI*EDMIIQ
Trigger: CTGGATAATCATGTCTTCCAATATAAAGTCACCAAG...TGAACCGTTGTCCACCATTAGTTTCTGTAAGTCTAAAATGAAGCTTTCAGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp GGCTGCATGGCTCCCCCGGAAAGGGACTCCCCCACTTaGGTGGCAGCATATGGCCAAATGACCCTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: GCMAPPERDSPT*VAAYGQMTLVG
Trigger: TCCCACCAGGGTCATTTGGCCATATGCTGCCACCAAAGTGGGGGAGTCCCTTTCCGGGGGAGCCATGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp GCCACCCATGAACAGGGGGCCTTCGGATACAAACGCTaGGCTTTGCAGAGGCAGCCCCGCCCTTTCCCTGTG +
Preference number: 6 (lower is better)
Translates to: ATHEQGAFGYKR*ALQRQPRPFPV
Trigger: CACAGGGAAAGGGCGGGGCTGCCTCTGCAAAGCCAAGCGTTTGTATCCGAAGGCCCCCTGTTCATGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp CCACCCATGAACAGGGGGCCTTCGGATACAAACGCTTaGCTTTGCAGAGGCAGCCCCGCCCTTTCCCTGTGT +
Preference number: 6 (lower is better)
Translates to: PPMNRGPSDTNA*LCRGSPALSLC
Trigger: ACACAGGGAAAGGGCGGGGCTGCCTCTGCAAAGCCAAGCGTTTGTATCCGAAGGCCCCCTGTTCATGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp GTTGCTGGGAGGAGTGACCCAGTAGACCAAGTCCTGTaGGGAAGAGTCCCCATCTCCTGCACACAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: VAGRSDPVDQVL*GRVPISCTQVP
Trigger: GGGGACCTGTGTGCAGGAGATGGGGACTCTTCCCCACAGGACTTGGTCTACTGGGTCACTCCTCCCAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp GTCATCCAGGCCACCCATGAACAGGGGGCCTTCGGATACAAACGCTaGGCTTTGCAGAGGCAGCCCCGCCCTTTCCCTGTGTTCATCCAC +
Preference number: 6 (lower is better)
Translates to: VIQATHEQGAFGYKR*ALQRQPRPFPVFIH
Trigger: GTGGATGAACACAGGGAAAGGGCGGGGCTGCCTCTGCAAAGCCAAGCGTTTGTATCCGAAGGCCCCCTGTTCATGGGTGGCCTGGATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp CCCCACGGCCTCCTATATAGATTCCATGGTGAAAGGTaGAGTTACGCAGCCCACCCGCCAGCCGGACGGTTG +
Preference number: 6 (lower is better)
Translates to: PHGLLYRFHGER*SYAAHPPAGRL
Trigger: CAACCGTCCGGCTGGCGGGTGGGCTGCGTAACTTCACCTTTCACCATGGAATCTATATAGGAGGCCGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp CCCGGAAAGGGACTCCCCCACTTTGGTGGCAGCATATaGCCAAATGACCCTGGTGGGAGAGACCTTGGCATC +
Preference number: 6 (lower is better)
Translates to: PGKGLPHFGGSI*PNDPGGRDLGI
Trigger: GATGCCAAGGTCTCTCCCACCAGGGTCATTTGGCCATATGCTGCCACCAAAGTGGGGGAGTCCCTTTCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp AGCACATTTCTCCACAGGCTCCGCCCCCAGAGGGGCTaGCCGATCATAGGATTGGGTCTGGAACAGACTAGG +
Preference number: 6 (lower is better)
Translates to: STFLHRLRPQRG*PIIGLGLEQTR
Trigger: CCTAGTCTGTTCCAGACCCAATCCTATGATCGGCCAGCCCCTCTGGGGGCGGAGCCTGTGGAGAAATGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp CAGGCCACCCATGAACAGGGGGCCTTCGGATACAAACGCTTGGCTTaGCAGAGGCAGCCCCGCCCTTTCCCTGTGTTCATCCACCATGAT +
Preference number: 6 (lower is better)
Translates to: QATHEQGAFGYKRLA*QRQPRPFPVFIHHD
Trigger: ATCATGGTGGATGAACACAGGGAAAGGGCGGGGCTGCCTCTGCAAAGCCAAGCGTTTGTATCCGAAGGCCCCCTGTTCATGGGTGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp CATGAACAGGGGGCCTTCGGATACAAACGCTTGGCTTaGCAGAGGCAGCCCCGCCCTTTCCCTGTGTTCATC +
Preference number: 6 (lower is better)
Translates to: HEQGAFGYKRLA*QRQPRPFPVFI
Trigger: GATGAACACAGGGAAAGGGCGGGGCTGCCTCTGCAAAGCCAAGCGTTTGTATCCGAAGGCCCCCTGTTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp CGTGTGCTCAGAGTCAAGACTTCTGACCCCTCCCTGTaGGCCCAGACCTGTGGCAGAGGCCAGAAGGATGAA +
Preference number: 6 (lower is better)
Translates to: RVLRVKTSDPSL*AQTCGRGQKDE
Trigger: TTCATCCTTCTGGCCTCTGCCACAGGTCTGGGCCAACAGGGAGGGGTCAGAAGTCTTGACTCTGAGCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp CACATTTCTCCACAGGCTCCGCCCCCAGAGTGGCCGATCATAGGATaGGGTCTGGAACAGACTAGGAGCCAGGCTGCTTCTAATAAGGGG +
Preference number: 6 (lower is better)
Translates to: HISPQAPPPEWPIIG*GLEQTRSQAASNKG
Trigger: CCCCTTATTAGAAGCAGCCTGGCTCCTAGTCTGTTCCAGACCCAATCCTATGATCGGCCACTCTGGGGGCGGAGCCTGTGGAGAAATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS TCA 72 bp GCACAGTTTCCCACATCCGGTCATCCAGGCCACCCATaGACAGGGGGCCTTCGGATACAAACGCTTGGCTTT +
Preference number: 6 (lower is better)
Translates to: AQFPTSGHPGHP*TGGLRIQTLGF
Trigger: AAAGCCAAGCGTTTGTATCCGAAGGCCCCCTGTTCATGGGTGGCCTGGATGACCGGATGTGGGAAACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp TGTCACCGTGACCGTGGGAATGGCTCCACTCCTCTCTaGTCTAGAGCCTGTGGATGGGGACTTCAGGTTTGT +
Preference number: 6 (lower is better)
Translates to: CHRDRGNGSTPL*SRACGWGLQVC
Trigger: ACAAACCTGAAGTCCCCATCCACAGGCTCTAGAGCAGAGAGGAGTGGAGCCATTCCCACGGTCACGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 72 bp CCCCTCTCAGGTGCTGCCACACTCCCTGCTGCAGCCTaGAGATGGCCAGAATCCAATACTTTCTTGTTTGCG +
Preference number: 6 (lower is better)
Translates to: PLSGAATLPAAA*RWPESNTFLFA
Trigger: CGCAAACAAGAAAGTATTGGATTCTGGCCATCTGCAGGCTGCAGCAGGGAGTGTGGCAGCACCTGAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp AGTGGGCATCACATCTGCACCCGCGATGCCGTCTTCTaGTGTGGATATTTGGAGGTATCCGTGTACGGGTGG +
Preference number: 6 (lower is better)
Translates to: SGHHICTRDAVF*CGYLEVSVYGW
Trigger: CCACCCGTACACGGATACCTCCAAATATCCACAGCAGAAGACGGCATCGCGGGTGCAGATGTGATGCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp ACAGAGCTTGGCCATGTCAGGATCCAAGTTCACCCATaGGTCCCAAGGAGCACATTTCTCCACAGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: TELGHVRIQVHP*VPRSTFLHRLR
Trigger: GCGGAGCCTGTGGAGAAATGTGCTCCTTGGGACGCATGGGTGAACTTGGATCCTGACATGGCCAAGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp AAGGAGCACATTTCTCCACAGGCTCCGCCCCCAGAGTaGCCGATCATAGGATTGGGTCTGGAACAGACTAGG +
Preference number: 6 (lower is better)
Translates to: KEHISPQAPPPE*PIIGLGLEQTR
Trigger: CCTAGTCTGTTCCAGACCCAATCCTATGATCGGCCACTCTGGGGGCGGAGCCTGTGGAGAAATGTGCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078163.14
CDS CCA 72 bp GTGTGCTCAGAGTCAAGACTTCTGACCCCTCCCTGTTaGCCCAGACCTGTGGCAGAGGCCAGAAGGATGAAT +
Preference number: 6 (lower is better)
Translates to: VCSESRLLTPPC*PRPVAEARRMN
Trigger: ATTCATCCTTCTGGCCTCTGCCACAGGTCTGGGCCAACAGGGAGGGGTCAGAAGTCTTGACTCTGAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp GTCACAAAAATCAGGAACCGAGCGAAATCTGGACCGTaGTGCCTGAAGAGCACACGCCCTTCCCGTAGGTCC +
Preference number: 6 (lower is better)
Translates to: VTKIRNRAKSGP*CLKSTRPSRRS
Trigger: GGACCTACGGGAAGGGCGTGTGCTCTTCAGGCACCACGGTCCAGATTTCGCTCGGTTCCTGATTTTTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp CTCTGTAGACGTGTGCTCAGAGTCAAGACTTCTGACCCCTCCCTGTaGGCCCAGACCTGTGGCAGAGGCCAGAAGGATGAATTCATCCCA +
Preference number: 6 (lower is better)
Translates to: LCRRVLRVKTSDPSL*AQTCGRGQKDEFIP
Trigger: TGGGATGAATTCATCCTTCTGGCCTCTGCCACAGGTCTGGGCCAACAGGGAGGGGTCAGAAGTCTTGACTCTGAGCACACGTCTACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp GGGCATCACATCTGCACCCGCGATGCCGTCTTCTGCTGTGGATATTaGGAGGTATCCGTGTACGGGTGGAGTTCTGACTGTGAACACTGC +
Preference number: 6 (lower is better)
Translates to: GHHICTRDAVFCCGY*EVSVYGWSSDCEHC
Trigger: GCAGTGTTCACAGTCAGAACTCCACCCGTACACGGATACCTCCAAATATCCACAGCAGAAGACGGCATCGCGGGTGCAGATGTGATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp TCAAGGAGTCTTGGAGCTGCTCGGGGTAAGACAGTATaGGAAGGCTGCACTGTATTTGCACGCAGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: SRSLGAARGKTV*EGCTVFARSRL
Trigger: GAGCCGGCTGCGTGCAAATACAGTGCAGCCTTCTCATACTGTCTTACCCCGAGCAGCTCCAAGACTCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135096.2
CDS TCA 72 bp CCTGTTGGCCCAGACCTGTGGCAGAGGCCAGAAGGATaGATTCATCCCACTGGGCCTCAGAGTCATCATGAA +
Preference number: 6 (lower is better)
Translates to: PVGPDLWQRPEG*IHPTGPQSHHE
Trigger: TTCATGATGACTCTGAGGCCCAGTGGGATGAATTCATCCTTCTGGCCTCTGCCACAGGTCTGGGCCAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp GCTAGTGTCAGTAAGCGCTGGCTGTCCCGCACAACGTaGAAGATCTTATCCACCACACGCACCGGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: ASVSKRWLSRTT*KILSTTRTGFS
Trigger: TGAGAAGCCGGTGCGTGTGGTGGATAAGATCTTTCACGTTGTGCGGGACAGCCAGCGCTTACTGACACTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp ATGGAGTCCCCTCTCAGGTGCTGCCACACTCCCTGCTaGAGCCTGCAGATGGCCAGAATCCAATACTTTCTT +
Preference number: 6 (lower is better)
Translates to: MESPLRCCHTPC*SLQMARIQYFL
Trigger: AAGAAAGTATTGGATTCTGGCCATCTGCAGGCTGCAGCAGGGAGTGTGGCAGCACCTGAGAGGGGACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp CCAGGGTATGACCTAAGGGACGTAAGGATCTCCCTCTaGTTAAACGCCACATCCTCCATGCATCCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: PGYDLRDVRISL*LNATSSMHPRK
Trigger: CTTCCGGGGATGCATGGAGGATGTGGCGTTTAACCAGAGGGAGATCCTTACGTCCCTTAGGTCATACCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp AGAACTGGGAATGGTCGTGGGAGAGGATGGCTCTGGTaGAAACAGGTCTTCCCCTGCCACAGAAGGATCTGT +
Preference number: 6 (lower is better)
Translates to: RTGNGRGRGWLW*KQVFPCHRRIC
Trigger: ACAGATCCTTCTGTGGCAGGGGAAGACCTGTTTCCACCAGAGCCATCCTCTCCCACGACCATTCCCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp TTTCAGAGGAGAACTGGGAATGGTCGTGGGAGAGGATaGCTCTGGTGGAAACAGGTCTTCCCCTGCCACAGA +
Preference number: 6 (lower is better)
Translates to: FQRRTGNGRGRG*LWWKQVFPCHR
Trigger: TCTGTGGCAGGGGAAGACCTGTTTCCACCAGAGCCATCCTCTCCCACGACCATTCCCAGTTCTCCTCTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp ACCATCTGTCACAAAAATCAGGAACCGAGCGAAATCTaGACCGTGGTGCCTGAAGAGCACACGCCCTTCCCG +
Preference number: 6 (lower is better)
Translates to: TICHKNQEPSEI*TVVPEEHTPFP
Trigger: CGGGAAGGGCGTGTGCTCTTCAGGCACCACGGTCCAGATTTCGCTCGGTTCCTGATTTTTGTGACAGATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp GCATCACATCTGCACCCGCGATGCCGTCTTCTGCTGTaGATATTTGGAGGTATCCGTGTACGGGTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: ASHLHPRCRLLL*IFGGIRVRVEF
Trigger: GAACTCCACCCGTACACGGATACCTCCAAATATCCACAGCAGAAGACGGCATCGCGGGTGCAGATGTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp TGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTTaGCCATGTCAGGATCCAAGTTCACCCATGCGTCCC +
Preference number: 6 (lower is better)
Translates to: CVSVRGWFVDRA*PCQDPSSPMRP
Trigger: GGGACGCATGGGTGAACTTGGATCCTGACATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp CTGCCACAGAAGGATCTGTACCACGGAGACCCTCACTaGTGCACCCAGCCGAAATGTCTCTGGAGACAAGAG +
Preference number: 6 (lower is better)
Translates to: LPQKDLYHGDPH*CTQPKCLWRQE
Trigger: CTCTTGTCTCCAGAGACATTTCGGCTGGGTGCACAAGTGAGGGTCTCCGTGGTACAGATCCTTCTGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp GGTGGGAGAGACCTTGGCATCTATATTTGGCTCTTTGCCACTGAGTaGACCCCAGGAATCTGTCCCCTGCCATCTGCCCTGGGTCAGATT +
Preference number: 6 (lower is better)
Translates to: GGRDLGIYIWLFATE*TPGICPLPSALGQI
Trigger: AATCTGACCCAGGGCAGATGGCAGGGGACAGATTCCTGGGGTCAACTCAGTGGCAAAGAGCCAAATATAGATGCCAAGGTCTCTCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 72 bp TCTGTCGACCTGACTCATTCACTTCATATGAAATGGTaGTCCGAAAAGCCTCGGGGCCCAGCTCCGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SVDLTHSLHMKW*SEKPRGPAPLE
Trigger: CTCCAGCGGAGCTGGGCCCCGAGGCTTTTCGGATCACCATTTCATATGAAGTGAATGAGTCAGGTCGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078163.14
ENSMUST00000135096.2
ENSMUST00000136755.10
CDS TCA 72 bp AGTGGCCGCTTTGGAGGGGCTGTGTCATTCTGTAGATaGTCTGGAGGCTCCTACCATTGGTCACTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SGRFGGAVSFCR*SGGSYHWSLLR
Trigger: TCTCAGCAGTGACCAATGGTAGGAGCCTCCAGATCATCTACAGAATGACACAGCCCCTCCAAAGCGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 72 bp GGGACTCCCCCACTTTGGTGGCAGCATATGGCCAAATaGCCCTGGTGGGAGAGACCTTGGCATCTATATTTG +
Preference number: 6 (lower is better)
Translates to: GTPPLWWQHMAK*PWWERPWHLYL
Trigger: CAAATATAGATGCCAAGGTCTCTCCCACCAGGGTCATTTGGCCATATGCTGCCACCAAAGTGGGGGAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 72 bp CCACAGAAGGATCTGTACCACGGAGACCCTCACTTGTaGACCCAGCCGAAATGTCTCTGGAGACAAGAGCAT +
Preference number: 6 (lower is better)
Translates to: PQKDLYHGDPHL*TQPKCLWRQEH
Trigger: ATGCTCTTGTCTCCAGAGACATTTCGGCTGGGTGCACAAGTGAGGGTCTCCGTGGTACAGATCCTTCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp GAGCCTGTGGATGGGGACTTCAGGTTTGTCTTTGGCTaGGTAAGTGGTTTGGGTTTGTCCTCCTTTCGGCTC +
Preference number: 6 (lower is better)
Translates to: EPVDGDFRFVFG*VSGLGLSSFRL
Trigger: GAGCCGAAAGGAGGACAAACCCAAACCACTTACCCAGCCAAAGACAAACCTGAAGTCCCCATCCACAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp AATGGCTCCACTCCTCTCTGCTCTAGAGCCTGTGGATaGGGACTTCAGGTTTGTCTTTGGCTGGGTAAGTGG +
Preference number: 6 (lower is better)
Translates to: NGSTPLCSRACG*GLQVCLWLGKW
Trigger: CCACTTACCCAGCCAAAGACAAACCTGAAGTCCCCATCCACAGGCTCTAGAGCAGAGAGGAGTGGAGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp GTTCACAGACTCAACAGTCACAAACAGGGTCTGAGGTaGACTCTGCTTGCCAAGCTCAGAGCTGTTCGCCAG +
Preference number: 6 (lower is better)
Translates to: VHRLNSHKQGLR*TLLAKLRAVRQ
Trigger: CTGGCGAACAGCTCTGAGCTTGGCAAGCAGAGTCCACCTCAGACCCTGTTTGTGACTGTTGAGTCTGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp GACCTTGGCATCTATATTTGGCTCTTTGCCACTGAGTaGACCCCAGGAATCTGTCCCCTGCCATCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: DLGIYIWLFATE*TPGICPLPSAL
Trigger: CAGGGCAGATGGCAGGGGACAGATTCCTGGGGTCAACTCAGTGGCAAAGAGCCAAATATAGATGCCAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp TTGTGTTTCAGTGCGGGGTTGGTTTGTCGACAGAGCTaGGCCATGTCAGGATCCAAGTTCACCCATGCGTCC +
Preference number: 6 (lower is better)
Translates to: LCFSAGLVCRQS*AMSGSKFTHAS
Trigger: GGACGCATGGGTGAACTTGGATCCTGACATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp CCCAAAGCTGTTGACCACCTGGTTTTCAATCAGCAAGTGGCCGCTTaGGAGGGGCTGTGTCATTCTGTAGATGATCTGGAGGCTCCTACC +
Preference number: 6 (lower is better)
Translates to: PKAVDHLVFNQQVAA*EGLCHSVDDLEAPT
Trigger: GGTAGGAGCCTCCAGATCATCTACAGAATGACACAGCCCCTCCAAAGCGGCCACTTGCTGATTGAAAACCAGGTGGTCAACAGCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 72 bp CCTGCCTTGTCATCATTGGTCACGGCTCTCAGGTCATaGGACGAAAGTGGCTTTGTGGAACCTGGGAAGATG +
Preference number: 6 (lower is better)
Translates to: PALSSLVTALRS*DESGFVEPGKM
Trigger: CATCTTCCCAGGTTCCACAAAGCCACTTTCGTCTCATGACCTGAGAGCCGTGACCAATGATGACAAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 72 bp TGGCCCTATTGTCACTTCCCAGAGAAGCAGACGAGCTaGCCAATTTCAGTTCCCCATGCTGAGGACTCTTGG +
Preference number: 6 (lower is better)
Translates to: WPYCHFPEKQTS*PISVPHAEDSW
Trigger: CCAAGAGTCCTCAGCATGGGGAACTGAAATTGGTCAGCTCGTCTGCTTCTCTGGGAAGTGACAATAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp TCGTCGTTCACAGACTCAACAGTCACAAACAGGGTCTaGGGTGGACTCTGCTTGCCAAGCTCAGAGCTGTTC +
Preference number: 6 (lower is better)
Translates to: SSFTDSTVTNRV*GGLCLPSSELF
Trigger: GAACAGCTCTGAGCTTGGCAAGCAGAGTCCACCTCAGACCCTGTTTGTGACTGTTGAGTCTGTGAACGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp ACCTATCGCCCTGCAGAACTGTCAACCGCAGCCCTTTaGTCTTTAATTCTGGAGGCTGATCATTCACAGGGG +
Preference number: 6 (lower is better)
Translates to: TYRPAELSTAAL*SLILEADHSQG
Trigger: CCCCTGTGAATGATCAGCCTCCAGAATTAAAGACCAAAGGGCTGCGGTTGACAGTTCTGCAGGGCGATAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp GGAGACCCTCACTTGTGCACCCAGCCGAAATGTCTCTaGAGACAAGAGCATCCCGTAATGCTCTCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: GDPHLCTQPKCL*RQEHPVMLSFP
Trigger: TGGAAAAGAGAGCATTACGGGATGCTCTTGTCTCCAGAGACATTTCGGCTGGGTGCACAAGTGAGGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp AGTCTTCCTCTCTTAGGTGGAATCAGTAGCTTGAAATaGAGTCCCCTCTCAGGTGCTGCCACACTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: SLPLLGGISSLK*SPLSGAATLPA
Trigger: AGCAGGGAGTGTGGCAGCACCTGAGAGGGGACTCCATTTCAAGCTACTGATTCCACCTAAGAGAGGAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp CCTCTGGTCACCTCAGTGACAGAATTCACCCACACCTaGAGGATGTTATTGGCTGTTACTACTGGAGCCTCG +
Preference number: 6 (lower is better)
Translates to: PLVTSVTEFTHT*RMLLAVTTGAS
Trigger: CGAGGCTCCAGTAGTAACAGCCAATAACATCCTCCAGGTGTGGGTGAATTCTGTCACTGAGGTGACCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp TCCCAAGGGACAGCCATGACCCGCAACACCACAGTATaGCTAACCAGCTCACCATCAGTTGCTCTTAGAGCA +
Preference number: 6 (lower is better)
Translates to: SQGTAMTRNTTV*LTSSPSVALRA
Trigger: TGCTCTAAGAGCAACTGATGGTGAGCTGGTTAGCAATACTGTGGTGTTGCGGGTCATGGCTGTCCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp GGTCCTAACTGGTTTCCACTCTCCGTTGGATCCCCGGTGCTGAATTaGGCCAAACTGAGGTGGATGTGTGATGTCATAGAGAGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: GPNWFPLSVGSPVLN*AKLRWMCDVIESVQ
Trigger: CTGGACACTCTCTATGACATCACACATCCACCTCAGTTTGGCCAAATTCAGCACCGGGGATCCAACGGAGAGTGGAAACCAGTTAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp ACTTCAAAGTCCCAAGGGACAGCCATGACCCGCAACACCACAGTATaGCTAACCAGCTCACCATCAGTTGCTCTTAGAGCAACTCGAGAG +
Preference number: 6 (lower is better)
Translates to: TSKSQGTAMTRNTTV*LTSSPSVALRATRE
Trigger: CTCTCGAGTTGCTCTAAGAGCAACTGATGGTGAGCTGGTTAGCAATACTGTGGTGTTGCGGGTCATGGCTGTCCCTTGGGACTTTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp CACCTTCACAGACAAGTTGTTCCGAGTGATGAGAATGGTACCACCTaGTGGTACCACCACGCCAGTCCTATCAGCCACTTCAAAGTCCCA +
Preference number: 6 (lower is better)
Translates to: HLHRQVVPSDENGTT*WYHHASPISHFKVP
Trigger: TGGGACTTTGAAGTGGCTGATAGGACTGGCGTGGTGGTACCACAAGGTGGTACCATTCTCATCACTCGGAACAACTTGTCTGTGAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp AGCCTCCCACTCACTATGTCTTCGTCTGTGAATCCAGTGGCCCTATaGTCACTTCCCAGAGAAGCAGACGAGCTGACCAATTTCAGTTCC +
Preference number: 6 (lower is better)
Translates to: SLPLTMSSSVNPVAL*SLPREADELTNFSS
Trigger: GGAACTGAAATTGGTCAGCTCGTCTGCTTCTCTGGGAAGTGACAATAGGGCCACTGGATTCACAGACGAAGACATAGTGAGTGGGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp AACTCATGGTCTGTTCTGACATCTTGGTTTGTGGTGACGCTCAGGTaGGCTGTTGTTAGAAAGCTGTCCCTCCCTCTGTGCACAAGCAGC +
Preference number: 6 (lower is better)
Translates to: NSWSVLTSWFVVTLR*AVVRKLSLPLCTSS
Trigger: GCTGCTTGTGCACAGAGGGAGGGACAGCTTTCTAACAACAGCCAACCTGAGCGTCACCACAAACCAAGATGTCAGAACAGACCATGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp ATCTGGAGGCTCCTACCATTGGTCACTGCTGAGAGATaGGTATTGGTGATGGGGACAGTGTTCTGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: IWRLLPLVTAER*VLVMGTVFWPC
Trigger: ACAAGGCCAGAACACTGTCCCCATCACCAATACTCATCTCTCAGCAGTGACCAATGGTAGGAGCCTCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 72 bp ACCATGATGTCCACGTGCCTCCCGGTGACTTTAAGCTaGACAACGTGCCACTTGTTGTCACTAACCAAGCTG +
Preference number: 6 (lower is better)
Translates to: TMMSTCLPVTLS*TTCHLLSLTKL
Trigger: CAGCTTGGTTAGTGACAACAAGTGGCACGTTGTTCAGCTTAAAGTCACCGGGAGGCACGTGGACATCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp CCCGGTGCTGAATTTGGCCAAACTGAGGTGGATGTGTaGTGTCATAGAGAGTGTCCAGCTCATGTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: PGAEFGQTEVDV*CHRECPAHVVH
Trigger: GTGGACAACATGAGCTGGACACTCTCTATGACATCACACATCCACCTCAGTTTGGCCAAATTCAGCACCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp ATTCAGACCGTCAGTCACCTGGAAATTAAAGCCACCTaGCATTGCTCCAGTGTGCACGAACACCAGCTGACC +
Preference number: 6 (lower is better)
Translates to: IQTVSHLEIKAT*HCSSVHEHQLT
Trigger: GGTCAGCTGGTGTTCGTGCACACTGGAGCAATGTCAGGTGGCTTTAATTTCCAGGTGACTGACGGTCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp CTAATGATCAGAGCTCGGGCAGTGATGCTAAAGATTTaGCGAGGCGCAAAATTCAGACCGTCAGTCACCTGG +
Preference number: 6 (lower is better)
Translates to: LMIRARAVMLKI*RGAKFRPSVTW
Trigger: CCAGGTGACTGACGGTCTGAATTTTGCGCCTCGGCAAATCTTTAGCATCACTGCCCGAGCTCTGATCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 72 bp ACCCACAACAAAGGCTGCACCCTGATGTTCAGTGTCTaGTCCGTCAAGTTGCACTCCGTTGTAAACAGTGAG +
Preference number: 6 (lower is better)
Translates to: THNKGCTLMFSV*SVKLHSVVNSE
Trigger: CTCACTGTTTACAACGGAGTGCAACTTGACGGAGCAGACACTGAACATCAGGGTGCAGCCTTTGTTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp TCTAGAGCCTGTGGATGGGGACTTCAGGTTTGTCTTTaGCTGGGTAAGTGGTTTGGGTTTGTCCTCCTTTCG +
Preference number: 6 (lower is better)
Translates to: SRACGWGLQVCL*LGKWFGFVLLS
Trigger: CGAAAGGAGGACAAACCCAAACCACTTACCCAGCCAAAGACAAACCTGAAGTCCCCATCCACAGGCTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp TCCCGGCTGCAAGGAAGAGTAAGCCTTGTGGCTTGCTaGTTTGAAATCTTAACTGAAGCGACAGCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: SRLQGRVSLVAC*FEILTEATAQG
Trigger: TCCCTGAGCTGTCGCTTCAGTTAAGATTTCAAACCAGCAAGCCACAAGGCTTACTCTTCCTTGCAGCCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp GTTGGATCCCCGGTGCTGAATTTGGCCAAACTGAGGTaGATGTGTGATGTCATAGAGAGTGTCCAGCTCATG +
Preference number: 6 (lower is better)
Translates to: VGSPVLNLAKLR*MCDVIESVQLM
Trigger: CATGAGCTGGACACTCTCTATGACATCACACATCCACCTCAGTTTGGCCAAATTCAGCACCGGGGATCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp TCCGAATTGGGTCAGCAGCTTTCACCAAATCTCCATTaGGTATGCCATGCCGAGTGTAGAGCAACTGGCCAT +
Preference number: 6 (lower is better)
Translates to: SELGQQLSPNLH*VCHAECRATGH
Trigger: ATGGCCAGTTGCTCTACACTCGGCATGGCATACCCAATGGAGATTTGGTGAAAGCTGCTGACCCAATTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp GCTAATGATCAGAGCTCGGGCAGTGATGCTAAAGATTaGCCGAGGCGCAAAATTCAGACCGTCAGTCACCTG +
Preference number: 6 (lower is better)
Translates to: ANDQSSGSDAKD*PRRKIQTVSHL
Trigger: CAGGTGACTGACGGTCTGAATTTTGCGCCTCGGCAAATCTTTAGCATCACTGCCCGAGCTCTGATCATTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp GAGATGAGTATTGGTGATGGGGACAGTGTTCTGGCCTaGTGGGAGAAGCAGGTCTGTGAGGTTCACAAGAGT +
Preference number: 6 (lower is better)
Translates to: EMSIGDGDSVLA*WEKQVCEVHKS
Trigger: ACTCTTGTGAACCTCACAGACCTGCTTCTCCCACAAGGCCAGAACACTGTCCCCATCACCAATACTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp GTTGACCACCTGGTTTTCAATCAGCAAGTGGCCGCTTaGGAGGGGCTGTGTCATTCTGTAGATGATCTGGAG +
Preference number: 6 (lower is better)
Translates to: VDHLVFNQQVAA*EGLCHSVDDLE
Trigger: CTCCAGATCATCTACAGAATGACACAGCCCCTCCAAAGCGGCCACTTGCTGATTGAAAACCAGGTGGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp GGGGACTTCAGGTTTGTCTTTGGCTGGGTAAGTGGTTaGGGTTTGTCCTCCTTTCGGCTCAGTAGCCAAACA +
Preference number: 6 (lower is better)
Translates to: GDFRFVFGWVSG*GLSSFRLSSQT
Trigger: TGTTTGGCTACTGAGCCGAAAGGAGGACAAACCCAAACCACTTACCCAGCCAAAGACAAACCTGAAGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp AGACAAGTTGTTCCGAGTGATGAGAATGGTACCACCTaGTGGTACCACCACGCCAGTCCTATCAGCCACTTC +
Preference number: 6 (lower is better)
Translates to: RQVVPSDENGTT*WYHHASPISHF
Trigger: GAAGTGGCTGATAGGACTGGCGTGGTGGTACCACAAGGTGGTACCATTCTCATCACTCGGAACAACTTGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp TGGTTTCCACTCTCCGTTGGATCCCCGGTGCTGAATTaGGCCAAACTGAGGTGGATGTGTGATGTCATAGAG +
Preference number: 6 (lower is better)
Translates to: WFPLSVGSPVLN*AKLRWMCDVIE
Trigger: CTCTATGACATCACACATCCACCTCAGTTTGGCCAAATTCAGCACCGGGGATCCAACGGAGAGTGGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp AGTAGCAGTCTTCCTCTCTTAGGTGGAATCAGTAGCTaGAAATGGAGTCCCCTCTCAGGTGCTGCCACACTC +
Preference number: 6 (lower is better)
Translates to: SSSLPLLGGISS*KWSPLSGAATL
Trigger: GAGTGTGGCAGCACCTGAGAGGGGACTCCATTTCAAGCTACTGATTCCACCTAAGAGAGGAAGACTGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp TCTGTTCTGACATCTTGGTTTGTGGTGACGCTCAGGTaGGCTGTTGTTAGAAAGCTGTCCCTCCCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: SVLTSWFVVTLR*AVVRKLSLPLC
Trigger: GCACAGAGGGAGGGACAGCTTTCTAACAACAGCCAACCTGAGCGTCACCACAAACCAAGATGTCAGAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp TACCCAGTACTGGTTGTGTTTCAGTGCGGGGTTGGTTaGTCGACAGAGCTTGGCCATGTCAGGATCCAAGTT +
Preference number: 6 (lower is better)
Translates to: YPVLVVFQCGVG*STELGHVRIQV
Trigger: AACTTGGATCCTGACATGGCCAAGCTCTGTCGACAAACCAACCCCGCACTGAAACACAACCAGTACTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp GTAGATGATCTGGAGGCTCCTACCATTGGTCACTGCTaGGAGATGAGTATTGGTGATGGGGACAGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: VDDLEAPTIGHC*EMSIGDGDSVL
Trigger: CAGAACACTGTCCCCATCACCAATACTCATCTCTCAGCAGTGACCAATGGTAGGAGCCTCCAGATCATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 72 bp CAGCGACACCTCAGACACCTTCTTAAAGCCAGGGTATaGCCTAAGGGACGTAAGGATCTCCCTCTGGTTAAA +
Preference number: 6 (lower is better)
Translates to: QRHLRHLLKARV*PKGRKDLPLVK
Trigger: TTTAACCAGAGGGAGATCCTTACGTCCCTTAGGTCATACCCTGGCTTTAAGAAGGTGTCTGAGGTGTCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp GTGTACGGGTGGAGTTCTGACTGTGAACACTGCCTCTaGAGGAATATCTTCTTCATTCCCAGCCTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: VYGWSSDCEHCL*RNIFFIPSLEL
Trigger: AAGCTCCAGGCTGGGAATGAAGAAGATATTCCTTCAGAGGCAGTGTTCACAGTCAGAACTCCACCCGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp AACGAATGCCAAGCCAAATCGTCCACACGAAGTCTTTaGTCAGAAAGGAGGATTTCTTGCCCCGTACCCATG +
Preference number: 6 (lower is better)
Translates to: NECQAKSSTRSL*SERRISCPVPM
Trigger: CATGGGTACGGGGCAAGAAATCCTCCTTTCTGAGCAAAGACTTCGTGTGGACGATTTGGCTTGGCATTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp AGGACAGTAATGTTAAACACATGTGGAACAGGAGCCTaGAGCTGGGACAGCAGTGCCTGCTTGCTACTAGAA +
Preference number: 6 (lower is better)
Translates to: RTVMLNTCGTGA*SWDSSACLLLE
Trigger: TTCTAGTAGCAAGCAGGCACTGCTGTCCCAGCTGCAGGCTCCTGTTCCACATGTGTTTAACATTACTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp TCAACAGAAACGCTGACTTTGATCTCTGTAGACGTGTaGTCAGAGTCAAGACTTCTGACCCCTCCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: STETLTLISVDV*SESRLLTPPCW
Trigger: CCAACAGGGAGGGGTCAGAAGTCTTGACTCTGAGCACACGTCTACAGAGATCAAAGTCAGCGTTTCTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp ATTTGCCGAGGCGCAAAATTCAGACCGTCAGTCACCTaGAAATTAAAGCCACCTGACATTGCTCCAGTGTGC +
Preference number: 6 (lower is better)
Translates to: ICRGAKFRPSVT*KLKPPDIAPVC
Trigger: GCACACTGGAGCAATGTCAGGTGGCTTTAATTTCCAGGTGACTGACGGTCTGAATTTTGCGCCTCGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp ATCATTGGTCACGGCTCTCAGGTCATGAGACGAAAGTaGCTTTGTGGAACCTGGGAAGATGCTCAATCCTCT +
Preference number: 6 (lower is better)
Translates to: IIGHGSQVMRRK*LCGTWEDAQSS
Trigger: AGAGGATTGAGCATCTTCCCAGGTTCCACAAAGCCACTTTCGTCTCATGACCTGAGAGCCGTGACCAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp ATGAGTATTGGTGATGGGGACAGTGTTCTGGCCTTGTaGGAGAAGCAGGTCTGTGAGGTTCACAAGAGTGAT +
Preference number: 6 (lower is better)
Translates to: MSIGDGDSVLAL*EKQVCEVHKSD
Trigger: ATCACTCTTGTGAACCTCACAGACCTGCTTCTCCCACAAGGCCAGAACACTGTCCCCATCACCAATACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp AATGACCCTGGTGGGAGAGACCTTGGCATCTATATTTaGCTCTTTGCCACTGAGTTGACCCCAGGAATCTGT +
Preference number: 6 (lower is better)
Translates to: NDPGGRDLGIYI*LFATELTPGIC
Trigger: ACAGATTCCTGGGGTCAACTCAGTGGCAAAGAGCCAAATATAGATGCCAAGGTCTCTCCCACCAGGGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp CACCCACACCTGGAGGATGTTATTGGCTGTTACTACTaGAGCCTCGTCGTTCACAGACTCAACAGTCACAAA +
Preference number: 6 (lower is better)
Translates to: HPHLEDVIGCYY*SLVVHRLNSHK
Trigger: TTTGTGACTGTTGAGTCTGTGAACGACGAGGCTCCAGTAGTAACAGCCAATAACATCCTCCAGGTGTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp GGCTTTGTGGAACCTGGGAAGATGCTCAATCCTCTGTaGACTTCTAAGCTAATGATCAGAGCTCGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: GFVEPGKMLNPL*TSKLMIRARAV
Trigger: CACTGCCCGAGCTCTGATCATTAGCTTAGAAGTCAACAGAGGATTGAGCATCTTCCCAGGTTCCACAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp TTCAGGTTTGTCTTTGGCTGGGTAAGTGGTTTGGGTTaGTCCTCCTTTCGGCTCAGTAGCCAAACACACAGG +
Preference number: 6 (lower is better)
Translates to: FRFVFGWVSGLG*SSFRLSSQTHR
Trigger: CCTGTGTGTTTGGCTACTGAGCCGAAAGGAGGACAAACCCAAACCACTTACCCAGCCAAAGACAAACCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp CAACGAATGCCAAGCCAAATCGTCCACACGAAGTCTTaGCTCAGAAAGGAGGATTTCTTGCCCCGTACCCAT +
Preference number: 6 (lower is better)
Translates to: QRMPSQIVHTKS*LRKEDFLPRTH
Trigger: ATGGGTACGGGGCAAGAAATCCTCCTTTCTGAGCAAAGACTTCGTGTGGACGATTTGGCTTGGCATTCGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp CTCACTATGTCTTCGTCTGTGAATCCAGTGGCCCTATaGTCACTTCCCAGAGAAGCAGACGAGCTGACCAAT +
Preference number: 6 (lower is better)
Translates to: LTMSSSVNPVAL*SLPREADELTN
Trigger: ATTGGTCAGCTCGTCTGCTTCTCTGGGAAGTGACAATAGGGCCACTGGATTCACAGACGAAGACATAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp TGTCTGGACATAGAGGACATGGCCATCATCAACATCTaGCTGGGTGAAGTTCAGAGTGGGCATCACATCTGC +
Preference number: 6 (lower is better)
Translates to: CLDIEDMAIINI*LGEVQSGHHIC
Trigger: GCAGATGTGATGCCCACTCTGAACTTCACCCAGCAAGATGTTGATGATGGCCATGTCCTCTATGTCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp TTCACAGTCAAGACCCTCCAAATACTTGCTTGCAATTaGGAGGTGATCCTGCAGAAGTACCTTGGAGCCCCC +
Preference number: 6 (lower is better)
Translates to: FTVKTLQILACN*EVILQKYLGAP
Trigger: GGGGGCTCCAAGGTACTTCTGCAGGATCACCTCCAAATTGCAAGCAAGTATTTGGAGGGTCTTGACTGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp TCAGTGACAGAATTCACCCACACCTGGAGGATGTTATaGGCTGTTACTACTGGAGCCTCGTCGTTCACAGAC +
Preference number: 6 (lower is better)
Translates to: SVTEFTHTWRML*AVTTGASSFTD
Trigger: GTCTGTGAACGACGAGGCTCCAGTAGTAACAGCCAATAACATCCTCCAGGTGTGGGTGAATTCTGTCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp GAGGCATCTAATTTTGATTGGTCAATGAGAACTTTATCTCCCTCCTaGACAGAGGCTCCTGTATTTGCACGCAGCCGGCTCTGTCGACCT +
Preference number: 6 (lower is better)
Translates to: EASNFDWSMRTLSPS*TEAPVFARSRLCRP
Trigger: AGGTCGACAGAGCCGGCTGCGTGCAAATACAGGAGCCTCTGTCAAGGAGGGAGATAAAGTTCTCATTGACCAATCAAAATTAGATGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 90 bp GCGCAGCTCCAACGAATGCCAAGCCAAATCGTCCACACGAAGTCTTaGCTCAGAAAGGAGGATTTCTTGCCCCGTACCCATGTTTATTTT +
Preference number: 6 (lower is better)
Translates to: AQLQRMPSQIVHTKS*LRKEDFLPRTHVYF
Trigger: AAAATAAACATGGGTACGGGGCAAGAAATCCTCCTTTCTGAGCAAAGACTTCGTGTGGACGATTTGGCTTGGCATTCGTTGGAGCTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp ACTCCTGCGCCACCTCTCTCCTGGAAAATTTCATTAGCTTCACTCTaGGAAACTTGGAGCTTTCGACATAACCGTGCTTTGGCGGTTCGA +
Preference number: 6 (lower is better)
Translates to: TPAPPLSWKISLASL*ETWSFRHNRALAVR
Trigger: TCGAACCGCCAAAGCACGGTTATGTCGAAAGCTCCAAGTTTCCAAGAGTGAAGCTAATGAAATTTTCCAGGAGAGAGGTGGCGCAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp GTCAACCGCAGCCCTTTGGTCTTTAATTCTGGAGGCTaGTCATTCACAGGGGTGATGGTGATGTTGAACATC +
Preference number: 6 (lower is better)
Translates to: VNRSPLVFNSGG*SFTGVMVMLNI
Trigger: GATGTTCAACATCACCATCACCCCTGTGAATGATCAGCCTCCAGAATTAAAGACCAAAGGGCTGCGGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp ACCAGGAGTCTGCCATGTTTTGGGGGTTGCACGATGTaGAATTCAAACTCATGGTCTGTTCTGACATCTTGG +
Preference number: 6 (lower is better)
Translates to: TRSLPCFGGCTM*NSNSWSVLTSW
Trigger: CCAAGATGTCAGAACAGACCATGAGTTTGAATTCCACATCGTGCAACCCCCAAAACATGGCAGACTCCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp GAGACAAGAGCATCCCGTAATGCTCTCTTTTCCAAATaGGCTTCTAAGGCTCGCAGGCATCCTTTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: ETRASRNALFSK*ASKARRHPFRD
Trigger: GTCTCTGAAAGGATGCCTGCGAGCCTTAGAAGCCAATTTGGAAAAGAGAGCATTACGGGATGCTCTTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp GTGATGGTGATGTTGAACATCTCTTCCAGAAAGCCAGCCTCTGGCTaGCTGGTGGACTTATTCTTTGGGTTTGGCCAAACAGCAAAGGTA +
Preference number: 6 (lower is better)
Translates to: VMVMLNISSRKPASG*LVDLFFGFGQTAKV
Trigger: TACCTTTGCTGTTTGGCCAAACCCAAAGAATAAGTCCACCAGCAAGCCAGAGGCTGGCTTTCTGGAAGAGATGTTCAACATCACCATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 90 bp ATGTCTCTGGAGACAAGAGCATCCCGTAATGCTCTCTTTTCCAAATaGGCTTCTAAGGCTCGCAGGCATCCTTTCAGAGACATACCTCGA +
Preference number: 6 (lower is better)
Translates to: MSLETRASRNALFSK*ASKARRHPFRDIPR
Trigger: TCGAGGTATGTCTCTGAAAGGATGCCTGCGAGCCTTAGAAGCCAATTTGGAAAAGAGAGCATTACGGGATGCTCTTGTCTCCAGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp GAGAATGAATTCACAGTCAAGACCCTCCAAATACTTGCTTGCAATTaGGAGGTGATCCTGCAGAAGTACCTTGGAGCCCCCTTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: ENEFTVKTLQILACN*EVILQKYLGAPFLN
Trigger: GTTCAAGAAGGGGGCTCCAAGGTACTTCTGCAGGATCACCTCCAAATTGCAAGCAAGTATTTGGAGGGTCTTGACTGTGAATTCATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp ATCGTGGACATACCACACTTTCCCATGCCTCAAATCTaGCAGAGTAAAAGTCCTCTCCATTTCCTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: IVDIPHFPMPQI*QSKSPLHFLCR
Trigger: CCTGCACAGGAAATGGAGAGGACTTTTACTCTGTCAGATTTGAGGCATGGGAAAGTGTGGTATGTCCACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp ACACGTCCCTGCTTTAGGTCATGCTGGGAAAATGAGTaGAAGGTAGAATTGTTGACCAGGAGTCTGCCATGT +
Preference number: 6 (lower is better)
Translates to: TRPCFRSCWENE*KVELLTRSLPC
Trigger: ACATGGCAGACTCCTGGTCAACAATTCTACCTTTCACTCATTTTCCCAGCATGACCTAAAGCAGGGACGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp GGACCTGACAACTGTAAATGTTACAGTTCTGTTTCCTaGCTTGTCATCATTGGTCACGGCTCTCAGGTCATG +
Preference number: 6 (lower is better)
Translates to: GPDNCKCYSSVS*LVIIGHGSQVM
Trigger: CATGACCTGAGAGCCGTGACCAATGATGACAAGGCAGGAAACAGAACTGTAACATTTACAGTTGTCAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078163.14
ENSMUST00000135096.2
ENSMUST00000136755.10
CDS GCA 72 bp AAGCTGGTGAGCCACTCTGTTGGTCACTTTCAAGTTTaGTATAACCCACAACAAAGGCTGCACCCTGATGTT +
Preference number: 6 (lower is better)
Translates to: KLVSHSVGHFQV*YNPQQRLHPDV
Trigger: AACATCAGGGTGCAGCCTTTGTTGTGGGTTATAGCAAACTTGAAAGTGACCAACAGAGTGGCTCACCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 72 bp ATACCCAGATCCATAAAGTCCACATCTACTTCTATATaGCTTTGTCCCAGTAAGGCCCGTCCACCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: IPRSIKSTSTSI*LCPSKARPPSW
Trigger: CCAAGAAGGTGGACGGGCCTTACTGGGACAAAGGCATATAGAAGTAGATGTGGACTTTATGGATCTGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp GGATCTAACACCTGTATCACCCTGGGTGTTAGTCGTTaGTTAGTGTTCTCAAAGAGAAGCAGGTGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GSNTCITLGVSR*LVFSKRSRCPS
Trigger: AGAAGGACACCTGCTTCTCTTTGAGAACACTAAGCAACGACTAACACCCAGGGTGATACAGGTGTTAGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp GAATTGTTGACCAGGAGTCTGCCATGTTTTGGGGGTTaGACGATGTGGAATTCAAACTCATGGTCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: ELLTRSLPCFGG*TMWNSNSWSVL
Trigger: CAGAACAGACCATGAGTTTGAATTCCACATCGTGCAACCCCCAAAACATGGCAGACTCCTGGTCAACAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp GCCGTCAGTCACACTAAAATAAAACACTCCCGAGGATaGGCTTCTATCTTGTATGAACCACACCTGAGCGTT +
Preference number: 6 (lower is better)
Translates to: AVSHTKIKHSRG*ASILYEPHLSV
Trigger: AACGCTCAGGTGTGGTTCATACAAGATAGAAGCCCATCCTCGGGAGTGTTTTATTTTAGTGTGACTGACGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CCA 72 bp AGACAAGAGCATCCCGTAATGCTCTCTTTTCCAAATTaGCTTCTAAGGCTCGCAGGCATCCTTTCAGAGACA +
Preference number: 6 (lower is better)
Translates to: RQEHPVMLSFPN*LLRLAGILSET
Trigger: TGTCTCTGAAAGGATGCCTGCGAGCCTTAGAAGCCAATTTGGAAAAGAGAGCATTACGGGATGCTCTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp TGTTTTGGGGGTTGCACGATGTGGAATTCAAACTCATaGTCTGTTCTGACATCTTGGTTTGTGGTGACGCTC +
Preference number: 6 (lower is better)
Translates to: CFGGCTMWNSNS*SVLTSWFVVTL
Trigger: GAGCGTCACCACAAACCAAGATGTCAGAACAGACCATGAGTTTGAATTCCACATCGTGCAACCCCCAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp TCTTGGAAACTTGGAGCTTTCGACATAACCGTGCTTTaGCGGTTCGAGGAGAATGAATTCACAGTCAAGACC +
Preference number: 6 (lower is better)
Translates to: SWKLGAFDITVL*RFEENEFTVKT
Trigger: GGTCTTGACTGTGAATTCATTCTCCTCGAACCGCCAAAGCACGGTTATGTCGAAAGCTCCAAGTTTCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp AATTTTGATTGGTCAATGAGAACTTTATCTCCCTCCTaGACAGAGGCTCCTGTATTTGCACGCAGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: NFDWSMRTLSPS*TEAPVFARSRL
Trigger: GAGCCGGCTGCGTGCAAATACAGGAGCCTCTGTCAAGGAGGGAGATAAAGTTCTCATTGACCAATCAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp AGTCCTCTCCATTTCCTGTGCAGGCCAAGCATCTATTaGAAGGAACCCATGAGCTGGCATTTCCTGTATCTT +
Preference number: 6 (lower is better)
Translates to: SPLHFLCRPSIY*KEPMSWHFLYL
Trigger: AAGATACAGGAAATGCCAGCTCATGGGTTCCTTCAAATAGATGCTTGGCCTGCACAGGAAATGGAGAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp GTAATGTTTCTCTCTCCAACCATAATGGTTCCATGGTaGGGAAGAGCCGTAACCTGGAACCAGATTTCATGG +
Preference number: 6 (lower is better)
Translates to: VMFLSPTIMVPW*GRAVTWNQISW
Trigger: CCATGAAATCTGGTTCCAGGTTACGGCTCTTCCTCACCATGGAACCATTATGGTTGGAGAGAGAAACATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 72 bp GTTTGGCCAAACAGCAAAGGTAAAATTATCAGCCAGTaGTTCGGAGTCGTCATGAAGATACGCGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: VWPNSKGKIISQ*FGVVMKIRGSK
Trigger: TTTGGAGCCGCGTATCTTCATGACGACTCCGAATCACTGGCTGATAATTTTACCTTTGCTGTTTGGCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS TCA 72 bp TTTCGACATAACCGTGCTTTGGCGGTTCGAGGAGAATaGATTCACAGTCAAGACCCTCCAAATACTTGCTTG +
Preference number: 6 (lower is better)
Translates to: FRHNRALAVRGE*IHSQDPPNTCL
Trigger: CAAGCAAGTATTTGGAGGGTCTTGACTGTGAATTCATTCTCCTCGAACCGCCAAAGCACGGTTATGTCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS GCA 72 bp CTAATCTCTAGAGGAATATTTTTCAGAAGTGTCAACTaGAGCCACTGCACAGTCACAGGGAACAGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: LISRGIFFRSVN*SHCTVTGNRSS
Trigger: AGAGCTCCTGTTCCCTGTGACTGTGCAGTGGCTGCAGTTGACACTTCTGAAAAATATTCCTCTAGAGATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp AAATCTCAGGAACCCTTCCCCGTGTACCTTCCATTCTaGAAAGGTAACATAGGACCTAGAGCTGAAAAAGCT +
Preference number: 6 (lower is better)
Translates to: KSQEPFPVYLPF*KGNIGPRAEKA
Trigger: AGCTTTTTCAGCTCTAGGTCCTATGTTACCTTTCCAGAATGGAAGGTACACGGGGAAGGGTTCCTGAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp AACGTAAACGAATCTGTAGGCTCTTCTGAACCATCGTaGACATACCACACTTTCCCATGCCTCAAATCTGAC +
Preference number: 6 (lower is better)
Translates to: NVNESVGSSEPS*TYHTFPCLKSD
Trigger: GTCAGATTTGAGGCATGGGAAAGTGTGGTATGTCCACGATGGTTCAGAAGAGCCTACAGATTCGTTTACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp AAAGGTAGAATTGTTGACCAGGAGTCTGCCATGTTTTaGGGGTTGCACGATGTGGAATTCAAACTCATGGTC +
Preference number: 6 (lower is better)
Translates to: KGRIVDQESAMF*GLHDVEFKLMV
Trigger: GACCATGAGTTTGAATTCCACATCGTGCAACCCCCAAAACATGGCAGACTCCTGGTCAACAATTCTACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp GTCAGTCACACTAAAATAAAACACTCCCGAGGATGGGCTTCTATCTaGTATGAACCACACCTGAGCGTTATTGATGTCCGCCTGTGTAAA +
Preference number: 6 (lower is better)
Translates to: VSHTKIKHSRGWASI*YEPHLSVIDVRLCK
Trigger: TTTACACAGGCGGACATCAATAACGCTCAGGTGTGGTTCATACAAGATAGAAGCCCATCCTCGGGAGTGTTTTATTTTAGTGTGACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 90 bp GCTGCAGCCTGCAGATGGCCAGAATCCAATACTTTCTTGTTTGCGTaGCTAATCTCTAGAGGAATATTTTTCAGAAGTGTCAACTGCAGC +
Preference number: 6 (lower is better)
Translates to: AAACRWPESNTFLFA*LISRGIFFRSVNCS
Trigger: GCTGCAGTTGACACTTCTGAAAAATATTCCTCTAGAGATTAGCAACGCAAACAAGAAAGTATTGGATTCTGGCCATCTGCAGGCTGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp ATGTGGAATTCAAACTCATGGTCTGTTCTGACATCTTaGTTTGTGGTGACGCTCAGGTTGGCTGTTGTTAGA +
Preference number: 6 (lower is better)
Translates to: MWNSNSWSVLTS*FVVTLRLAVVR
Trigger: TCTAACAACAGCCAACCTGAGCGTCACCACAAACCAAGATGTCAGAACAGACCATGAGTTTGAATTCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp TCCTGGAAAATTTCATTAGCTTCACTCTTGGAAACTTaGAGCTTTCGACATAACCGTGCTTTGGCGGTTCGA +
Preference number: 6 (lower is better)
Translates to: SWKISLASLLET*SFRHNRALAVR
Trigger: TCGAACCGCCAAAGCACGGTTATGTCGAAAGCTCCAAGTTTCCAAGAGTGAAGCTAATGAAATTTTCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp ACTAAAATAAAACACTCCCGAGGATGGGCTTCTATCTaGTATGAACCACACCTGAGCGTTATTGATGTCCGC +
Preference number: 6 (lower is better)
Translates to: TKIKHSRGWASI*YEPHLSVIDVR
Trigger: GCGGACATCAATAACGCTCAGGTGTGGTTCATACAAGATAGAAGCCCATCCTCGGGAGTGTTTTATTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp ACTATAGTATCGGATCTGACTCTGGTCAATGGAACGTaGAGAAAAGGTCCTAACTGGTTTCCACTCTCCGTT +
Preference number: 6 (lower is better)
Translates to: TIVSDLTLVNGT*RKGPNWFPLSV
Trigger: AACGGAGAGTGGAAACCAGTTAGGACCTTTTCTCAACGTTCCATTGACCAGAGTCAGATCCGATACTATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp CCACCTCTCTCCTGGAAAATTTCATTAGCTTCACTCTaGGAAACTTGGAGCTTTCGACATAACCGTGCTTTG +
Preference number: 6 (lower is better)
Translates to: PPLSWKISLASL*ETWSFRHNRAL
Trigger: CAAAGCACGGTTATGTCGAAAGCTCCAAGTTTCCAAGAGTGAAGCTAATGAAATTTTCCAGGAGAGAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp GAGCCATGGCTAAGAAGCCATTGTTGGGATGACGGATaGTCTCATATTGGATTTCATTTGGAGGACTATCTA +
Preference number: 6 (lower is better)
Translates to: EPWLRSHCWDDG*SHIGFHLEDYL
Trigger: TAGATAGTCCTCCAAATGAAATCCAATATGAGATCATCCGTCATCCCAACAATGGCTTCTTAGCCATGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS GCA 72 bp AATGAATTCACAGTCAAGACCCTCCAAATACTTGCTTaGAATTTGGAGGTGATCCTGCAGAAGTACCTTGGA +
Preference number: 6 (lower is better)
Translates to: NEFTVKTLQILA*NLEVILQKYLG
Trigger: TCCAAGGTACTTCTGCAGGATCACCTCCAAATTGCAAGCAAGTATTTGGAGGGTCTTGACTGTGAATTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp TGCAGGCCAAGCATCTATTTGAAGGAACCCATGAGCTaGCATTTCCTGTATCTTAAACAGTATCTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: CRPSIYLKEPMS*HFLYLKQYLRR
Trigger: TCTTCTCAGATACTGTTTAAGATACAGGAAATGCCAGCTCATGGGTTCCTTCAAATAGATGCTTGGCCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp GAACATAGTAAATCAACTCCTGCGCCACCTCTCTCCTaGAAAATTTCATTAGCTTCACTCTTGGAAACTTGG +
Preference number: 6 (lower is better)
Translates to: EHSKSTPAPPLS*KISLASLLETW
Trigger: CCAAGTTTCCAAGAGTGAAGCTAATGAAATTTTCCAGGAGAGAGGTGGCGCAGGAGTTGATTTACTATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp TGGATTTCATTTGGAGGACTATCTATATCTTCTACATaGAGGATTTCAGGTCCCACAACCAACCTATCGCCC +
Preference number: 6 (lower is better)
Translates to: WISFGGLSISST*RISGPTTNLSP
Trigger: GGGCGATAGGTTGGTTGTGGGACCTGAAATCCTCAATGTAGAAGATATAGATAGTCCTCCAAATGAAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp GCTGCAGCCTGCAGATGGCCAGAATCCAATACTTTCTaGTTTGCGTTGCTAATCTCTAGAGGAATATTTTTC +
Preference number: 6 (lower is better)
Translates to: AAACRWPESNTF*FALLISRGIFF
Trigger: GAAAAATATTCCTCTAGAGATTAGCAACGCAAACAAGAAAGTATTGGATTCTGGCCATCTGCAGGCTGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 90 bp ATCTCATATTGGATTTCATTTGGAGGACTATCTATATCTTCTACATaGAGGATTTCAGGTCCCACAACCAACCTATCGCCCTGCAGAACT +
Preference number: 6 (lower is better)
Translates to: ISYWISFGGLSISST*RISGPTTNLSPCRT
Trigger: AGTTCTGCAGGGCGATAGGTTGGTTGTGGGACCTGAAATCCTCAATGTAGAAGATATAGATAGTCCTCCAAATGAAATCCAATATGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 72 bp ATTGTCCTTTCCCCCTCTTTAACATACAGTCCAGTGTaGGTTATAGTGACATGTGTCTTATCTGCTTTAAGG +
Preference number: 6 (lower is better)
Translates to: IVLSPSLTYSPV*VIVTCVLSALR
Trigger: CCTTAAAGCAGATAAGACACATGTCACTATAACCAACACTGGACTGTATGTTAAAGAGGGGGAAAGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS TCA 72 bp CCTACTCTTCCCTCTATGTTAACTCTAAACTTAAAGTaGTCCGTCACATTTTCTTGCTGCAATCCCTTGAAT +
Preference number: 6 (lower is better)
Translates to: PTLPSMLTLNLK*SVTFSCCNPLN
Trigger: ATTCAAGGGATTGCAGCAAGAAAATGTGACGGATCACTTTAAGTTTAGAGTTAACATAGAGGGAAGAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CAA 72 bp TGCAGATGGCCAGAATCCAATACTTTCTTGTTTGCGTaGCTAATCTCTAGAGGAATATTTTTCAGAAGTGTC +
Preference number: 6 (lower is better)
Translates to: CRWPESNTFLFA*LISRGIFFRSV
Trigger: GACACTTCTGAAAAATATTCCTCTAGAGATTAGCAACGCAAACAAGAAAGTATTGGATTCTGGCCATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10
CDS CCA 72 bp GTTGGGATGACGGATGATCTCATATTGGATTTCATTTaGAGGACTATCTATATCTTCTACATTGAGGATTTC +
Preference number: 6 (lower is better)
Translates to: VGMTDDLILDFI*RTIYIFYIEDF
Trigger: GAAATCCTCAATGTAGAAGATATAGATAGTCCTCCAAATGAAATCCAATATGAGATCATCCGTCATCCCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078163.14
ENSMUST00000136755.10
CDS CAA 90 bp TTTGTAATTATTGTCCTTTCCCCCTCTTTAACATACAGTCCAGTGTaGGTTATAGTGACATGTGTCTTATCTGCTTTAAGGTCTATCCTA +
Preference number: 6 (lower is better)
Translates to: FVIIVLSPSLTYSPV*VIVTCVLSALRSIL
Trigger: TAGGATAGACCTTAAAGCAGATAAGACACATGTCACTATAACCAACACTGGACTGTATGTTAAAGAGGGGGAAAGGACAATAATTACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136755.10