RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSPG4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032911

Ensembl transcript IDs: ENSMUST00000035661.7

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCACCAGGGTGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTaGTGGCCAGTGCTTCGGGCGCTCCACCACAGGGCTTTGTGGGTG +
Preference number: 1 (lower is better)
Translates to: ATRVASNTPSPSTDS*WPVLRALHHRALWV
Trigger: CACCCACAAAGCCCTGTGGTGGAGCGCCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCACCCTGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR GCA 90 bp CGAAGCACCATTCGCCACGGCTCAGTGGAGTCAAGTGTCTTCGTTTaGCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGGCC +
Preference number: 1 (lower is better)
Translates to: RSTIRHGSVESSVFV*LLPSLEESMATRVA
Trigger: GGCCACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACTTGACTCCACTGAGCCGTGGCGAATGGTGCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR GCA 90 bp GCACCATTCGCCACGGCTCAGTGGAGTCAAGTGTCTTCGTTTGCCTaGTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGGCCTCTA +
Preference number: 1 (lower is better)
Translates to: APFATAQWSQVSSFA*SLVLRRAWPPGWPL
Trigger: TAGAGGCCACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACTTGACTCCACTGAGCCGTGGCGAATGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CCA 90 bp TCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTaGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAG +
Preference number: 1 (lower is better)
Translates to: SFACSLVLRRAWPPG*PLTLPVQALTVAGQ
Trigger: CTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR TCA 90 bp ACCCGGAGTTGTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTaGGCTGACTTTAGCTGCCTCTCACCTTGGCCCCATGGCGCTCCA +
Preference number: 1 (lower is better)
Translates to: TRSCDPSRMLSCFLQ*ADFSCLSPWPHGAP
Trigger: TGGAGCGCCATGGGGCCAAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCACAACTCCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CCA 90 bp AGTCAAGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATaGCCACCAGGGTGGCCTCTAACACTCCCAGTCCAAGCACTGACA +
Preference number: 1 (lower is better)
Translates to: SQVSSFACSLVLRRA*PPGWPLTLPVQALT
Trigger: TGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACTTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR GCA 90 bp AACAGCCCATCTGCCTGTACAGGTGAGAGTAGAGGACTTTGGGAATaGCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCAT +
Preference number: 1 (lower is better)
Translates to: NSPSACTGESRGLWE*PRRWKFKSLSRFVH
Trigger: ATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCTCACCTGTACAGGCAGATGGGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CCA 90 bp TCAACAAACAGCCCATCTGCCTGTACAGGTGAGAGTAGAGGACTTTaGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTT +
Preference number: 1 (lower is better)
Translates to: STNSPSACTGESRGL*ECPRRWKFKSLSRF
Trigger: AAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCTCACCTGTACAGGCAGATGGGCTGTTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CAA 90 bp ACGGCTCAGTGGAGTCAAGTGTCTTCGTTTGCCTGCTCCCTAGTCTaGAGGAGAGCATGGCCACCAGGGTGGCCTCTAACACTCCCAGTC +
Preference number: 2 (lower is better)
Translates to: TAQWSQVSSFACSLV*RRAWPPGWPLTLPV
Trigger: GACTGGGAGTGTTAGAGGCCACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACTTGACTCCACTGAGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR TCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGGAAGTCTCCAGCTCTTaGCCCCACTCATTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGEVSSS*PHSFQL
Trigger: CAGCTGGAATGAGTGGGGTCAAGAGCTGGAGACTTC...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR CCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCGGGCTTCATCAGGCCTaGCTAGGCCAGCACCATGTT +
Preference number: 2 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSGLHQA*LGQHHV
Trigger: AACATGGTGCTGGCCTAGCCAGGCCTGATGAAGCCC...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR CCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCTGACCTTGGCAGTCTaGGTCAGGATTTATCTAAGG +
Preference number: 2 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGLTLAV*VRIYLR
Trigger: CCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAG...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR CCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCCTCACCTTGGCCCCATaGCGCTCCAGGTCTAAGAGA +
Preference number: 2 (lower is better)
Translates to: VTHLGCFPVFCSELTLAALTLAP*RSRSKR
Trigger: TCTCTTAGACCTGGAGCGCCATGGGGCCAAGGTGAG...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR GCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCTGCTTTCCTGTTTTCTaGAGTGAGCTGACTTTAGCT +
Preference number: 2 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSCFPVF*SELTLA
Trigger: AGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCA...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR GCA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATGTGACCCATCTAGGATaGTTTCCTGTTTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDVTHLG*FPVFCS
Trigger: ACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR GCA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATCAACCCCACCCATCTTaGACCTTGAATATATTAATC +
Preference number: 2 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDQPHPS*TLNILI
Trigger: GATTAATATATTCAAGGTGCAAGATGGGTGGGGTTG...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CCA 72 bp TCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTaGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SSGQTRVQQQWA*WMGGQHLVQAR
Trigger: CCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR GCA 72 bp GCCACGGCTCAGTGGAGTCAAGTGTCTTCGTTTGCCTaGTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGG +
Preference number: 3 (lower is better)
Translates to: ATAQWSQVSSFA*SLVLRRAWPPG
Trigger: CCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACTTGACTCCACTGAGCCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR CAA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGGGAAGTCTCCAGCTCTaGACCCCACTCATTCCAGCT +
Preference number: 3 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGGSLQL*TPLIPA
Trigger: AGCTGGAATGAGTGGGGTCAAGAGCTGGAGACTTCC...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR TCA 72 bp TCCAGGTCTAAGAGAGCCGAGGAAGTCTCCAGCTCTTaGCCCCACTCATTCCAGCTGTCTCCCAGCTCCCTC +
Preference number: 3 (lower is better)
Translates to: SRSKRAEEVSSS*PHSFQLSPSSL
Trigger: GAGGGAGCTGGGAGACAGCTGGAATGAGTGGGGTCAAGAGCTGGAGACTTCCTCGGCTCTCTTAGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR GCA 72 bp ATTCGCCACGGCTCAGTGGAGTCAAGTGTCTTCGTTTaGCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACC +
Preference number: 3 (lower is better)
Translates to: IRHGSVESSVFV*LLPSLEESMAT
Trigger: GGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACTTGACTCCACTGAGCCGTGGCGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CCA 72 bp TGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTaGCCTCTAACACTCCCAGTCCAAGCACTGACAGTT +
Preference number: 3 (lower is better)
Translates to: CSLVLRRAWPPG*PLTLPVQALTV
Trigger: AACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CCA 72 bp TCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATaGCCACCAGGGTGGCCTCTAACACTCCCAGTCCAA +
Preference number: 3 (lower is better)
Translates to: SSFACSLVLRRA*PPGWPLTLPVQ
Trigger: TTGGACTGGGAGTGTTAGAGGCCACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CCA 72 bp AGAGAGGGTGCTCTCGTTCCCCTGACCTTGGCAGTCTaGGTCAGGATTTATCTAAGGTCACAGTTCCAGGAC +
Preference number: 3 (lower is better)
Translates to: REGALVPLTLAV*VRIYLRSQFQD
Trigger: GTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAGGGGAACGAGAGCACCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR GCA 72 bp GGAGTTGTGACCCATCTAGGATGCTTTCCTGTTTTCTaGAGTGAGCTGACTTTAGCTGCCTCTCACCTTGGC +
Preference number: 3 (lower is better)
Translates to: GVVTHLGCFPVF*SELTLAASHLG
Trigger: GCCAAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCACAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR GCA 72 bp TCTGCCTGTACAGGTGAGAGTAGAGGACTTTGGGAATaGCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: SACTGESRGLWE*PRRWKFKSLSR
Trigger: TCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCTCACCTGTACAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR CAA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCGCAACCCCACCCATCTaGCACCTTGAATATATTAAT +
Preference number: 3 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSATPPI*HLEYIN
Trigger: ATTAATATATTCAAGGTGCAAGATGGGTGGGGTTGC...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR GCA 72 bp ACAGTTCCAGGACCCGGAGTTGTGACCCATCTAGGATaGTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCT +
Preference number: 3 (lower is better)
Translates to: TVPGPGVVTHLG*FPVFCSELTLA
Trigger: AGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCACAACTCCGGGTCCTGGAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR CAA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCACATGACTTCAGACCTTaGTCTATCCCGTGTACTCCA +
Preference number: 3 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPHDFRP*SIPCTP
Trigger: TGGAGTACACGGGATAGACAAAGGTCTGAAGTCATG...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR-3UTR CAA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCACACCCATCTTGCACCTaGAATATATTAATCTATTGC +
Preference number: 3 (lower is better)
Translates to: GMPQEVEIQELVQICPSPHPSCT*NILIYC
Trigger: GCAATAGATTAATATATTCAAGGTGCAAGATGGGTG...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTCGCAGGGTGGTACCCTaGGGCCATGGCCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGRRVVP*GHGPPA
Trigger: GGCTGGTGGGCCATGGCCTCAGGGTACCACCCTGCG...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGAGCCATCCTGCTGCGTaGCCCCACCACCATGGGCGT +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWSHPAA*PHHHGR
Trigger: ACGCCCATGGTGGTGGGGGCACGCAGCAGGATGGCT...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGGGTCAAGGCGCAGGGTaGTACCCTGAGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWGQGAG*YPEAMA
Trigger: GGCCATGGCCTCAGGGTACCACCCTGCGCCTTGACC...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTGGGCTGGATGCTGCCTaGCCTGGCTGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGGLDAA*PGWPVG
Trigger: CCCCACTGGCCAGCCAGGCCAGGCAGCATCCAGCCC...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGCACCTTTGGCCGCAGTaGGCACGGGGCTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWHLWPQ*ARGWML
Trigger: CAGCATCCAGCCCCGTGCCCACTGCGGCCAAAGGTG...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGAGCAGCTGCCCCCACTaGGGACCAGCGGTTACATGG +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWSSCPH*GPAVTW
Trigger: CCATGTAACCGCTGGTCCTCAGTGGGGGCAGCTGCT...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGGGTGGCTCTAGCACCTaGAGGACAAGGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWGGSST*RTRPGS
Trigger: GCTGCCAGGCCTTGTCCTGCAGGTGCTAGAGCCACC...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCGGGATGCTGCCTGGCCTaGCTGGCCAGTGGGGACGCT +
Preference number: 4 (lower is better)
Translates to: ASNTPSPSTDSCWPVLRAGCCLA*LASGDA
Trigger: AGCGTCCCCACTGGCCAGCCAGGCCAGGCAGCATCC...CGCCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGCCTGGTGGGGGCCCCTaGCCAGGCACAGTTATGAGT +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWPGGGP*PGTVMS
Trigger: ACTCATAACTGTGCCTGGCCAGGGGCCCCCACCAGG...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGCTCCAAGGAGAGGAGTaGCTGCTTCTGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWLQGEE*LLLGHH
Trigger: GTGGTGGCCCAGAAGCAGGCACTCCTCTCCTTGGAG...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGCGGTCAACTTCCGGGTaGCCTCCAAGGAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWRSTSG*PPRRGV
Trigger: CACTCCTCTCCTTGGAGGGCACCCGGAAGTTGACCG...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTCCACATCGCGCTGGTaGAAGGCCAGTGTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWSTSRW*KASVSH
Trigger: GTGGGACACACTGGCCTTCCACCAGCGCGATGTGGA...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTCAGACACCAGGAGCTaGCCTCGGGTGGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWSDTRS*PRVGNC
Trigger: ACAGTTCCCCACCCGAGGCCAGCTCCTGGTGTCTGA...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTAGTTCTGGGTCAGGCTaGCCTCCTGGTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGSSGSG*PPGGGP
Trigger: GGGGCCCCCACCAGGAGGCCAGCCTGACCCAGAACT...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp AGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGCTACCTGCAGCTGGCTaGAGGCGGAGGCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVFVCLLPSLEESMATRVLPAAG*RRRQAA
Trigger: GGCAGCCTGCCTCCGCCTTCAGCCAGCTGCAGGTAG...CACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTAAGCGGAAGCCATCCTaGTGCGTGCCCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGKRKPS*CVPPPP
Trigger: TGGTGGTGGGGGCACGCAGCAGGATGGCTTCCGCTT...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGGGGCACGGGGCTGGATaGTGCCTGGCCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPEGHGAG*CLAWLA
Trigger: GGCCAGCCAGGCCAGGCAGCATCCAGCCCCGTGCCC...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCTGCACCAGTTGCAGTaGGGCCAGGGGACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGLHQLQ*GQGTLE
Trigger: CTCGAGGGTCCCCTGGCCCCACTGCAACTGGTGCAG...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTGGTACCCTGAGGCCATaGCCCACCAGCCCACACATG +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGGTLRP*PTSPHM
Trigger: CATGTGTGGGCTGGTGGGCCATGGCCTCAGGGTACC...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTTGGCATCGAGCACAGTaGGGTCAAGGCGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGWHRAQ*GQGAGW
Trigger: CCACCCTGCGCCTTGACCCCACTGTGCTCGATGCCA...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTGAACATCCAGGGGGATaGCTGTGGGCAGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGEHPGG*LWAAPP
Trigger: TGGAGGTGCTGCCCACAGTCATCCCCCTGGATGTTC...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTTCATGCCGACTGCGCTaGGATGCTGGCACACTGGCT +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGSCRLR*DAGTLA
Trigger: AGCCAGTGTGCCAGCATCTCAGCGCAGTCGGCATGA...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTTTGTGCTGCACCAGTTaGAGTGGGGCCAGGGGACCC +
Preference number: 4 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGLCCTS*SGARGP
Trigger: GGGTCCCCTGGCCCCACTGCAACTGGTGCAGCACAA...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCGAAGGAGAGGAGTGCCTaGTTCTGGGCCACCACTCGG +
Preference number: 4 (lower is better)
Translates to: ASNTPSPSTDSCWPVLRAKERSA*FWATTR
Trigger: CCGAGTGGTGGCCCAGAAGCAGGCACTCCTCTCCTT...CGCCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTCTACCAGGGAGATATTaGCAGCCCCCGGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGLPGRY*QPPVPG
Trigger: GCCTGGCACCGGGGGCTGCCAATATCTCCCTGGTAG...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGTGATCTTGGCCCGCTaGCCCTCGGGGACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGVILAR*PSGTQR
Trigger: TCTTTGGGTCCCCGAGGGCCAGCGGGCCAAGATCAC...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTCAAGGCCACAGCAGGTaGGACACCCTTTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGQGHSR*DTLCPQ
Trigger: CTGTGGGCAAAGGGTGTCCCACCTGCTGTGGCCTTG...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTAGTCAGGCTGGCCTCCTaGTGGGGGCCCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVVRLAS*WGPLAR
Trigger: CCTGGCCAGGGGCCCCCACCAGGAGGCCAGCCTGAC...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTGGCCTTGAGGTGGGATaGTCTTGGGATGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGGLEVG*SWDGSR
Trigger: TCTGCTCCCATCCCAAGAGCATCCCACCTCAAGGCC...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTCCACCAGCCCACACATaGAACAGAGCCTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGPPAHT*NRACTV
Trigger: CACAGTGCAGGCTCTGTTGCATGTGTGGGCTGGTGG...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp AGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGGGGGCATACTGCCTGTaGGGTTGGCCAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SVFVCLLPSLEESMATRVGAYCL*GWPAHW
Trigger: CCAGTGAGCTGGCCAACCGCACAGGCAGTATGCCCC...CACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp AGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGACCTGCCCTCTGGCTTaGCCACCTCTAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SVFVCLLPSLEESMATRVTCPLA*PPLAPA
Trigger: AGCTGGGGCTAGAGGTGGGCAAGCCAGAGGGCAGGT...CACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCGAGGATGTCACTGGGGTaGACTTCCCCTTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ASNTPSPSTDSCWPVLRARMSLG*TSPLGP
Trigger: GGGACCCAAAGGGGAAGTCCACCCCAGTGACATCCT...CGCCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGCCACCCCGGGCCACGTaGAAGACACGGCTAATGGTC +
Preference number: 4 (lower is better)
Translates to: SVFVCLLPSLEESMATRVPPRAT*KTRLMV
Trigger: GACCATTAGCCGTGTCTTCCACGTGGCCCGGGGTGG...CACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCGTGCCCCCACCACCATaGGCGTACACCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSVPPPP*AYTSCP
Trigger: GGGACAGCTGGTGTACGCCCATGGTGGTGGGGGCAC...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGGGTTGGCCAGCTCACTaGCATCGAGCACAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGGWPAH*HRAQWG
Trigger: ACCCCACTGTGCTCGATGCCAGTGAGCTGGCCAACC...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTTACTGCCTGTGCGGTTaGCCAGCTCACTGGCATCGA +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGYCLCG*PAHWHR
Trigger: TCGATGCCAGTGAGCTGGCCAACCGCACAGGCAGTA...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCGTTGGCGGTCAACACCTaGACATCGTGCTTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: ASNTPSPSTDSCWPVLRALAVNT*TSCLPV
Trigger: GACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAA...CGCCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCTAGGTGGGCTGGGGTaGGGGTCTCCTGATGAGGGT +
Preference number: 4 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSLGGLG*GSPDEG
Trigger: ACCCTCATCAGGAGACCCTCACCCCAGCCCACCTAG...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp AGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGACAGGGGCCCCTGAGTaGGGCGGTAAGCTACATCTG +
Preference number: 4 (lower is better)
Translates to: SVFVCLLPSLEESMATRVTGAPE*GGKLHL
Trigger: CAGATGTAGCTTACCGCCTCACTCAGGGGCCCCTGT...CACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp AGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGGGAAGTGGGGCATACTaGCTGTGCGGTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SVFVCLLPSLEESMATRVGSGAY*LCGWPA
Trigger: AGCTGGCCAACCGCACAGGCAGTATGCCCCACTTCC...CACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTACACGGGGCTGGATGCTaGCTGGCCTGGCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVHGAGC*LAWLAS
Trigger: ACTGGCCAGCCAGGCCAGGCAGCATCCAGCCCCGTG...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTAGGGCAAGTCTGACCTaGAGGCATCCTGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGRASLT*RHPEWS
Trigger: GCTCCACTCAGGATGCCTCCAGGTCAGACTTGCCCT...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGCTCTGGCAGTTCCATaGCTGGCCAAGCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGALAVP*LAKLLV
Trigger: CACCAGAAGCTTGGCCAGCCATGGAACTGCCAGAGC...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTGGAGGTTGCCTCTTCTaGGGGCCTGAACCAACTCAT +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGGGCLF*GPEPTH
Trigger: ATGAGTTGGTTCAGGCCCCCAGAAGAGGCAACCTCC...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGTCTTCCAGAGACGGCTaGGGCGCTGGGGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LTLAVWVRIYLRSQFQDPSSRDG*GAGDRQ
Trigger: CTGCCTGTCCCCAGCGCCCCAGCCGTCTCTGGAAGA...CGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCGACCTGGAGGCATCCTaGGTGGAGCTGGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSDLEAS*VELEQE
Trigger: CTCTTGCTCCAGCTCCACTCAGGATGCCTCCAGGTC...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGGACAGCCTTGTACCCTaGAGCAGGAGGTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGDSLVP*SRRLPL
Trigger: AAGAGGCAACCTCCTGCTTCAGGGTACAAGGCTGTC...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCGGAAGTAAGGCCCAGTaGTCTGGACCAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSGSKAQ*SGPEEG
Trigger: CCCCTCCTCTGGTCCAGATCACTGGGCCTTACTTCC...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCGGGGTGGGGAACTGTGTaGCCTGGAAGAGTACATCAT +
Preference number: 4 (lower is better)
Translates to: ASNTPSPSTDSCWPVLRAGWGTV*PGRVHH
Trigger: ATGATGTACTCTTCCAGGTCACACAGTTCCCCACCC...CGCCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCAGCCAGGCCCAGACGGTaGTCTTGGAGGTGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: GMPQEVEIQELVQICPSPARPRR*SWRWRE
Trigger: CTCTCGCCACCTCCAAGAGCACCGTCTGGGCCTGGC...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp CCCCTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACGACCTCGGTGTCTGGTaGCACCCTCAAGGCGATCCG +
Preference number: 4 (lower is better)
Translates to: PLTLAVWVRIYLRSQFQDDLGVW*HPQGDP
Trigger: CGGATCGCCTTGAGGGTGGCACCAGACACCGAGGTC...GTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGGAAGCCATTGTGGGGTaGCCTCTGTACTTCATATTC +
Preference number: 4 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWEAIVG*PLYFIF
Trigger: GAATATGAAGTACAGAGGGCACCCCACAATGGCTTC...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp CTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGGGCACCTCCAGGGGTaGACGCAGCTGCACCTCAAT +
Preference number: 4 (lower is better)
Translates to: LTLAVWVRIYLRSQFQDPGHLQG*TQLHLN
Trigger: ATTGAGGTGCAGCTGCGTGCACCCCTGGAGGTGCCC...CGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGTCCCCCTGGTCTACCTaGAGCTGGCTGAAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPESPWST*SWLKAE
Trigger: CTCCGCCTTCAGCCAGCTGCAGGTAGACCAGGGGGA...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGAGGTGGGACACCCTTTaGCCACAGCTCCAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGRWDTL*PQLQSK
Trigger: CTTACTCTGGAGCTGTGGGCAAAGGGTGTCCCACCT...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTCCGTCTTGTTGCGTTTaGGGAGGTAGAAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGPSCCV*GGRRAE
Trigger: CTCTGCTCTTCTACCTCCGCAAACGCAACAAGACGG...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCCTGGACATCGTGCTTaGCCGTCTTGTTGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGPGHRA*PSCCVC
Trigger: GCAAACGCAACAAGACGGGCAAGCACGATGTCCAGG...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTGGTGTCCGGCAAAACTaGAATAGTTCTGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGGVRQN*NSSGSG
Trigger: GCCTGACCCAGAACTATTGCAGTTTTGCCGGACACC...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTAGGAATACATGGCTCTaGCAGTTCCATGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGRNTWL*QFHGWP
Trigger: TGGCCAGCCATGGAACTGCCAGAGCCATGTATTCCT...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGTCGAGCAAGTCCCGTTaGGAGAAGGAGGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGSSKSR*EKEVTD
Trigger: GTCAGTCACCTCCTTCTCCCAACGGGACTTGCTCGA...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGGCAGCACTGCCTCCTaGACCACCTCTAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LTLAVWVRIYLRSQFQDPGSTAS*TTSSWS
Trigger: GGACCAGCTAGAGGTGGTCCAGGAGGCAGTGCTGCC...CGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGAGCCCACTGTCCAGCTaGGCCTGTGTGAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LTLAVWVRIYLRSQFQDPSPLSS*ACVKRW
Trigger: CCACCGCTTCACACAGGCCCAGCTGGACAGTGGGCT...CGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGAGACCGATGGTGTCATaGGCTTCCCAGAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGRPMVS*ASQKGS
Trigger: TGAGCCCTTCTGGGAAGCCCATGACACCATCGGTCT...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCAGCCAGGAGCCGGAAGTaGGGCATACTGCCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: GMPQEVEIQELVQICPSPARSRK*GILPVR
Trigger: CCGCACAGGCAGTATGCCCCACTTCCGGCTCCTGGC...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCCAGTGGGCACGGGGCTaGATGCTGCCTGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VTHLGCFPVFCSELTLAAQWARG*MLPGLA
Trigger: AGCCAGGCCAGGCAGCATCCAGCCCCGTGCCCACTG...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCATACTCTGGTCAGAGCTaGGGGCACGGGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: GMPQEVEIQELVQICPSPYSGQS*GHGHLQ
Trigger: CTGGAGGTGCCCGTGCCCTCAGCTCTGACCAGAGTA...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTAGCCCGTAGGTGGCCTTaGGGTGGGATGCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVARRWP*GGMLLG
Trigger: TCCCAAGAGCATCCCACCTCAAGGCCACCTACGGGC...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCCCAGCTGGGCCTGTGTaGAGCGGTGGACCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: VTHLGCFPVFCSELTLAAPAGPV*SGGPRC
Trigger: ACACCGAGGTCCACCGCTTCACACAGGCCCAGCTGG...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCGTCATCTTGGCCTGCTaGCAAGAGGAGCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSVILAC*QEEQGF
Trigger: GAAGCCCTGCTCCTCTTGGCAGCAGGCCAAGATGAC...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCATGGTCATCTTGGCCTaGTGCCAAGAGGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSMVILA*CQEEQG
Trigger: GCCCTGCTCCTCTTGGCAGCAGGCCAAGATGACCAT...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATCGGAAGCCATCCTGCTaGGTGCCCCCACCACCATGG +
Preference number: 4 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDRKPSC*VPPPPW
Trigger: CCATGGTGGTGGGGGCACGCAGCAGGATGGCTTCCG...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGAACACCTGGACATCGTaGTTGCCCGTCTTGTTGCGT +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGNTWTS*LPVLLR
Trigger: ACGCAACAAGACGGGCAAGCACGATGTCCAGGTGTT...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTAGCCTGTGTGAAGCGGTaGACCTCGGTGTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVACVKR*TSVSGA
Trigger: GGCACCAGACACCGAGGTCCACCGCTTCACACAGGC...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCCACCTGCTGGGCCAGTaGACCTGCCCTCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VTHLGCFPVFCSELTLAAHLLGQ*TCPLAC
Trigger: GCAAGCCAGAGGGCAGGTCCACTGGCCCAGCAGGTG...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGCAGGGCTCCTCTGTGTaGGAACAGCACAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LTLAVWVRIYLRSQFQDPQGSSV*EQHKPT
Trigger: AGTGGGCTTGTGCTGTTCTCACACAGAGGAGCCCTG...CGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGTTGGAAGGCCAGGGGTaGTTGCTGACTCCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPELEGQG*LLTPSG
Trigger: ACCACTCGGAGTCAGCAAGCACCCCTGGCCTTCCAA...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp CCCCTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACTCCTCTGCACTTCCTTaGTGGGCATGGAGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: PLTLAVWVRIYLRSQFQDSSALP*WAWRSR
Trigger: CCGACTCCTCCATGCCCAGCAAGGAAGTGCAGAGGA...GTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTACACACTGCTCCCATTTaGCACGAAGGCCAGTCGCCC +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVHTAPI*HEGQSP
Trigger: GGGCGACTGGCCTTCGTGGCAAATGGGAGCAGTGTG...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCACGCTTGTCCCCTGCTTaGAAGGCCAGGGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPRLSPA*KARGAC
Trigger: GCAAGCACCCCTGGCCTTCCAAGCAGGGGACAAGCG...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCTTCTGGTGCCAGGGTaGAGAAAGTTTCATATGGGC +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGLLVPG*RKFHMG
Trigger: GCCCATATGAAACTTTCTCCACCCTGGCACCAGAAG...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAAGGGATGCCTCTAGGTaGGCTGGGGTGAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPRDASR*AGVRVS
Trigger: GGAGACCCTCACCCCAGCCCACCTAGAGGCATCCCT...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGAGCATGGCAGTAGCCTaGTGCTGCCCATCAGACACC +
Preference number: 4 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPESMAVA*CCPSDT
Trigger: GGTGTCTGATGGGCAGCACCAGGCTACTGCCATGCT...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CCCCTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACTGGCAGCCAGATCCCTaGCAGGTGGTGAGGACAGTA +
Preference number: 4 (lower is better)
Translates to: PLTLAVWVRIYLRSQFQDWQPDP*QVVRTV
Trigger: TACTGTCCTCACCACCTGCCAGGGATCTGGCTGCCA...GTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGGCAGCTGCACCTCAATaGTGGATGGCAAGACATCCA +
Preference number: 4 (lower is better)
Translates to: SVFVCLLPSLEESMATRVAAAPQ*WMARHP
Trigger: TGGATGTCTTGCCATCCACCATTGAGGTGCAGCTGC...CACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGGGACGCTTCTTCCTaGTTTCTCTGTTTCTGTACG +
Preference number: 4 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGGDASS*FLCFCT
Trigger: CGTACAGAAACAGAGAAACCAGGAAGAAGCGTCCCC...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CAA 72 bp TGGAGTCAAGTGTCTTCGTTTGCCTGCTCCCTAGTCTaGAGGAGAGCATGGCCACCAGGGTGGCCTCTAACA +
Preference number: 4 (lower is better)
Translates to: WSQVSSFACSLV*RRAWPPGWPLT
Trigger: TGTTAGAGGCCACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACTTGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTGCCAGGGGTGCTTGCTaGCTCCGAGTGGTGAGCGTA +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLARGAC*LRVVSV
Trigger: TACGCTCACCACTCGGAGTCAGCAAGCACCCCTGGC...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATAGGCCTGCATCCTGCTaGCATGTCACGGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDRPASC*HVTGQP
Trigger: TGGCTGACCCGTGACATGTCAGCAGGATGCAGGCCT...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTGGGTGTCTTGGGGGCTaGGGCTGCCATTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLGCLGG*GCHCGC
Trigger: ACAGCCACAATGGCAGCCTCAGCCCCCAAGACACCC...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCTCAGCCTGTGTGAAGTaGGTCACAGGTCCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSSACVK*VTGPVL
Trigger: CAACACTGGACCTGTGACTCACTTCACACAGGCTGA...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTCCAGAGCTACAACTTTaGAGTGATCCTGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGPELQL*SDPERK
Trigger: CTTCCTCTCAGGATCACTTCAAAGTTGTAGCTCTGG...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTGCTGGAGCACTGGCCTaGATCCCATCACTGACCCGG +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLAGALA*IPSLTR
Trigger: CCGGGTCAGTGATGGGATGCAGGCCAGTGCTCCAGC...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATAGACGCCGGCCACACTaGTCCCATTTGCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDRRRPH*SHLPRR
Trigger: CCTTCGTGGCAAATGGGAGCAGTGTGGCCGGCGTCT...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGGTGGGATGCTCTTaGGATGGGAGCAGAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LTLAVWVRIYLRSQFQDPEVGCS*DGSRGV
Trigger: AACACCTCTGCTCCCATCCCAAGAGCATCCCACCTC...CGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCCGGGGAGAAATGGGGTaGGGATGTGACCCGGAAACG +
Preference number: 4 (lower is better)
Translates to: VTHLGCFPVFCSELTLAARGEMG*GCDPET
Trigger: CGTTTCCGGGTCACATCCCCACCCCATTTCTCCCCG...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGGGTGTTAGTGTGTACTaGCCCTGCTGCCACAGAAAA +
Preference number: 4 (lower is better)
Translates to: SVFVCLLPSLEESMATRVGVSVY*PCCHRK
Trigger: TTTTCTGTGGCAGCAGGGCCAGTACACACTAACACC...CACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTAGACGGCTGGGGCGCTaGGGACAGGCAGCATCGAAA +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLRRLGR*GQAASK
Trigger: TTTCGATGCTGCCTGTCCCCAGCGCCCCAGCCGTCT...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCACCTCCTGGCATGGAGTaGCTCCTCAGACACCAGGAG +
Preference number: 4 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPPPGME*LLRHQE
Trigger: CTCCTGGTGTCTGAGGAGCCACTCCATGCCAGGAGG...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCAGGAATGGAGGCCTGTaGCTGAGGGGGCCGCTCATT +
Preference number: 4 (lower is better)
Translates to: VTHLGCFPVFCSELTLAARNGGL*LRGPLI
Trigger: AATGAGCGGCCCCCTCAGCCACAGGCCTCCATTCCT...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGTCAGACATGCTCAACTaGAAGACGCCGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPESDMLN*KTPATL
Trigger: CAGTGTGGCCGGCGTCTTCCAGTTGAGCATGTCTGA...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCAAGTCTGTCACCTGCTaGGCCAGTGGACCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VTHLGCFPVFCSELTLAAKSVTC*ASGPAL
Trigger: GAGGGCAGGTCCACTGGCCCAGCAGGTGACAGACTT...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTGTTGGGAGAAGGAGGTaGCTGACTGGCCATCCCGGA +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLVGRRR*LTGHPG
Trigger: TCCGGGATGGCCAGTCAGTCACCTCCTTCTCCCAAC...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CCCCTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACTTACCTCAGCCTGGGTaGAGTTCACCAAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: PLTLAVWVRIYLRSQFQDLPQPG*SSPRPP
Trigger: AGGAGGTCTTGGTGAACTTCACCCAGGCTGAGGTAA...GTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTCAGCCTCAGGGACACTaGGTAGGGCCACACTGTAGG +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLQPQGH*VGPHCR
Trigger: CCTACAGTGTGGCCCTACTCAGTGTCCCTGAGGCTG...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCAGTACTGGCCATTCCTaGGGGCAGGATTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VTHLGCFPVFCSELTLAASTGHS*GQDWVS
Trigger: GGACACCCAATCCTGCCCTCAGGAATGGCCAGTACT...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGGTGTCTGCTGGCGTCTaGAGCTTTAGCTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPEVSAGV*SFSSFC
Trigger: ACAGAAGGAGCTAAAGCTGCAGACGCCAGCAGACAC...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCAAGTGTGTACTGGCCCTaGTGCCACAGAAAACGCCAG +
Preference number: 4 (lower is better)
Translates to: GMPQEVEIQELVQICPSPSVYWP*CHRKRQ
Trigger: CTGGCGTTTTCTGTGGCAGCAGGGCCAGTACACACT...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTTCAGAGGACATCTCGTaGTCATACAGAATATTCCCA +
Preference number: 4 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGSEDIS*SYRIFP
Trigger: TGGGAATATTCTGTATGAGCACGAGATGTCCTCTGA...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCATGGCTCCATCAGACATaGTCAACTGGAAGACGCCGG +
Preference number: 4 (lower is better)
Translates to: GMPQEVEIQELVQICPSPWLHQT*STGRRR
Trigger: CCGGCGTCTTCCAGTTGAGCATGTCTGATGGAGCCA...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCAGTAAGTCTGTCACCTaGTGGGCCAGTGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: VTHLGCFPVFCSELTLAASKSVT*WASGPA
Trigger: GGCAGGTCCACTGGCCCAGCAGGTGACAGACTTACT...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCAACATTTTCCGGGTTTaGGCTCCCAGGATGTCTAGC +
Preference number: 4 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSNIFRV*APRMSS
Trigger: GCTAGACATCCTGGGAGCCCAAACCCGGAAAATGTT...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCATACCTTCAGTGTCGCTaGAGCACTGGCCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPYLQCR*STGLHP
Trigger: GGGATGCAGGCCAGTGCTCCAGCGACACTGAAGGTA...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGTTTCTACTGACAGGTTaGCAGGCAAGATGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LTLAVWVRIYLRSQFQDPFLLTG*QARWLR
Trigger: CCGCAGCCATCTTGCCTGCCAACCTGTCAGTAGAAA...CGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGAGTGAAGGATGTCACTaGGGTGGACTTCCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPESEGCH*GGLPLW
Trigger: CCAAAGGGGAAGTCCACCCCAGTGACATCCTTCACT...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGGGATATCATCCTCTATaGTCTCAGAGTCATCGTGCT +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGGYHPL*SQSHRA
Trigger: AGCACGATGACTCTGAGACCATAGAGGATGATATCC...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCAAGGCCTCAGAGGTCTaGGGTCCTGCCACAGAAGTC +
Preference number: 4 (lower is better)
Translates to: VTHLGCFPVFCSELTLAAKASEV*GPATEV
Trigger: GACTTCTGTGGCAGGACCCCAGACCTCTGAGGCCTT...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
3UTR CAA 72 bp GAAAACACCAGAGAGGGTGCTCTCGTTCCCCTGACCTaGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ENTREGALVPLT*AVWVRIYLRSQ
Trigger: CTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAGGGGAACGAGAGCACCCTCTCTGGTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTAATTGCAAGGTACCAGTaGCTCGGAACAGCACGCTCA +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVIARYQ*LGTARS
Trigger: TGAGCGTGCTGTTCCGAGTCACTGGTACCTTGCAAT...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCACATCCTCCTCAGGCCTaGATCCTGCTGACATGTCAC +
Preference number: 4 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPHPPQA*ILLTCH
Trigger: GTGACATGTCAGCAGGATGCAGGCCTGAGGAGGATG...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCACTGGGAAAGACAGATTaGTCAGTGTCTCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GMPQEVEIQELVQICPSPLGKTD*SVSPGP
Trigger: TGGGCCAGGAGACACTGAGCAATCTGTCTTTCCCAG...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTACCAGCTCCACAGAGATaGCTTCAAGAGGATCACCCA +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVPAPQR*LQEDHP
Trigger: TGGGTGATCCTCTTGAAGGCATCTCTGTGGAGCTGG...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGGGAGAAAGTTTCATATaGGCCATAGACCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGGESFI*AIDLFF
Trigger: GAAGAAGAGGTCTATGGCCCATATGAAACTTTCTCC...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTAGAGGACGGGAGCATTTaGGTCACCACCAATGTGGAT +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVEDGSI*VTTNVD
Trigger: ATCCACATTGGTGGTGACCCAAATGCTCCCGTCCTC...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCAAGGTTGGTGTCCAGCTaGAGCACAGCAGTGTCAATG +
Preference number: 4 (lower is better)
Translates to: GMPQEVEIQELVQICPSPRLVSS*STAVSM
Trigger: CATTGACACTGCTGTGCTCCAGCTGGACACCAACCT...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTATTCGTATGTCCAGGTTaGTGTCCAGCTGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVFVCPG*CPAGAQ
Trigger: CTGTGCTCCAGCTGGACACCAACCTGGACATACGAA...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAAGGAGTGCCTGCTTCTaGGCCACCACTCGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPRSACF*ATTRKK
Trigger: TTTCTTCCGAGTGGTGGCCCAGAAGCAGGCACTCCT...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTGTACATCATGCCGACTaGGCTGAGATGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLVHHAD*AEMLAH
Trigger: GTGTGCCAGCATCTCAGCGCAGTCGGCATGATGTAC...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGCTTGCCCGTCTTGTTaGGTTTGCGGAGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPACPSC*VCGGRR
Trigger: TCTTCTACCTCCGCAAACGCAACAAGACGGGCAAGC...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGGGATGCTCTTGGGATaGGAGCAGAGGTGTTCAACA +
Preference number: 4 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPGMLLG*EQRCST
Trigger: TGTTGAACACCTCTGCTCCCATCCCAAGAGCATCCC...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp AGAGTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGAAGGTATGAGGTTGTaGGCTTCCCTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RVEDFGNAPGGGNSRACPEGMRL*ASLFLL
Trigger: GAGGAGGAAGAGGGAAGCCCACAACCTCATACCTTC...TGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATACAGTAGGAGACCGATaGTGTCATGGGCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDTVGDR*CHGLPR
Trigger: TCTGGGAAGCCCATGACACCATCGGTCTCCTACTGT...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTAGGGAACTGTGTGACCTaGAAGAGTACATCATGCCGA +
Preference number: 4 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVGNCVT*KSTSCR
Trigger: TCGGCATGATGTACTCTTCCAGGTCACACAGTTCCC...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp ACCAACCCCAGAGCAACCCCACCCATCTTGCACCTTGAATATATTAATCTATTGGTACGTCCTAGAGCTTaGGGCACCTCCAGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: TNPRATPPILHLEYINLLVRPRA*GTSRGA
Trigger: TGCACCCCTGGAGGTGCCCCAAGCTCTAGGACGTAC...CAATAGATTAATATATTCAAGGTGCAAGATGGGTGGGGTTGCTCTGGGGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATCATGGTAAGGCTCAGTaGCAAAGTCCAGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDHGKAQ*QSPARP
Trigger: TGGCCTTGCTGGACTTTGCCACTGAGCCTTACCATG...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTTCCAGGAGAAGGTGCTaGGGCTCCCATCTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLSRRRC*GSHLEN
Trigger: ATTCTCAAGATGGGAGCCTCAGCACCTTCTCCTGGA...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTCCAGGTCCCGCTGAGTaGAATGTTCCACAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLPGPAE*NVPQVG
Trigger: ACCAACTTGTGGAACATTTCACTCAGCGGGACCTGG...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATGTACGCGTAGGGTATTaGTCTACAGAGATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDVRVGY*STEISS
Trigger: GCTGGAAATCTCTGTAGACCAATACCCTACGCGTAC...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp ACCAACCCCAGAGCAACCCCACCCATCTTGCACCTTGAATATATTAATCTATTGCACCACCAATGTGGATaGGGAATGTGTAGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: TNPRATPPILHLEYINLLHHQCG*GMCRAG
Trigger: CCCCGCTCTACACATTCCCCATCCACATTGGTGGTG...CAATAGATTAATATATTCAAGGTGCAAGATGGGTGGGGTTGCTCTGGGGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTGCATTTACCTCAGCCTaGGTGAAGTTCACCAAGACC +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLAFTSA*VKFTKT
Trigger: GGTCTTGGTGAACTTCACCCAGGCTGAGGTAAATGC...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp ACCAACCCCAGAGCAACCCCACCCATCTTGCACCTTGAATATATTAATCTATTGACAGAGCCTGCACTGTaGCATTTACGGTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: TNPRATPPILHLEYINLLTEPAL*HLRWLM
Trigger: CATCAGCCACCGTAAATGTCACAGTGCAGGCTCTGT...CAATAGATTAATATATTCAAGGTGCAAGATGGGTGGGGTTGCTCTGGGGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR TCA 90 bp ACCAACCCCAGAGCAACCCCACCCATCTTGCACCTTGAATATATTAATCTATTGTCTTCCAGGTCCCGCTaGGTGAAATGTTCCACAAGT +
Preference number: 4 (lower is better)
Translates to: TNPRATPPILHLEYINLLSSRSR*VKCSTS
Trigger: ACTTGTGGAACATTTCACTCAGCGGGACCTGGAAGA...CAATAGATTAATATATTCAAGGTGCAAGATGGGTGGGGTTGCTCTGGGGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR GCA 90 bp CTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCTCTCACCTTTGCACAAACAGGACTTaGTTCTTCCTGAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: LGCFPVFCSELTLAASHLCTNRT*FFLRSS
Trigger: AGAGGATCTCAGGAAGAAGCAAGTCCTGTTTGTGCA...AAGGTGAGAGGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CCA 90 bp ACCAACCCCAGAGCAACCCCACCCATCTTGCACCTTGAATATATTAATCTATTGCATCCTGAGTGGAGCTaGAGCAAGAGATGGTCATCT +
Preference number: 4 (lower is better)
Translates to: TNPRATPPILHLEYINLLHPEWS*SKRWSS
Trigger: AGATGACCATCTCTTGCTCCAGCTCCACTCAGGATG...CAATAGATTAATATATTCAAGGTGCAAGATGGGTGGGGTTGCTCTGGGGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp CCCGTCGGTCCCTGGAGGTGGGCACGGAAGCGGAAGCCATCCTGCTaGGTGCCCCCACCACCATGGGCGTACACCAGCTGTCCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: PVGPWRWARKRKPSC*VPPPPWAYTSCPAA
Trigger: GGCCGCGGGACAGCTGGTGTACGCCCATGGTGGTGGGGGCACGCAGCAGGATGGCTTCCGCTTCCGTGCCCACCTCCAGGGACCGACGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp GTCCCCGTCGGTCCCTGGAGGTGGGCACGGAAGCGGAAGCCATCCTaGTGCGTGCCCCCACCACCATGGGCGTACACCAGCTGTCCCGCG +
Preference number: 5 (lower is better)
Translates to: VPVGPWRWARKRKPS*CVPPPPWAYTSCPA
Trigger: CGCGGGACAGCTGGTGTACGCCCATGGTGGTGGGGGCACGCAGCAGGATGGCTTCCGCTTCCGTGCCCACCTCCAGGGACCGACGGGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp TGTTCGGCCTTGGGACACTCGGACCACACGGCCATAGCGGGGTCCTaGCAGGAGCCGGAAGTGGGGCATACTGCCTGTGCGGTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: CSALGHSDHTAIAGS*QEPEVGHTACAVGQ
Trigger: CTGGCCAACCGCACAGGCAGTATGCCCCACTTCCGGCTCCTGGCAGGACCCCGCTATGGCCGTGTGGTCCGAGTGTCCCAAGGCCGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp GCCCAGGAAACCACCTTTGGCCGCAGTGGGCACGGGGCTGGATGCTaGCTGGCCTGGCTGGCCAGTGGGGACGCTTCTTCCTGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: AQETTFGRSGHGAGC*LAWLASGDASSWFL
Trigger: GAGAAACCAGGAAGAAGCGTCCCCACTGGCCAGCCAGGCCAGGCAGCATCCAGCCCCGTGCCCACTGCGGCCAAAGGTGGTTTCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp TGGGCACGGAAGCGGAAGCCATCCTGCTGCGTGCCCCCACCACCATaGGCGTACACCAGCTGTCCCGCGGCCAGCTCAGATTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: WARKRKPSCCVPPPP*AYTSCPAASSDCRK
Trigger: CTTCCTGCAATCTGAGCTGGCCGCGGGACAGCTGGTGTACGCCCATGGTGGTGGGGGCACGCAGCAGGATGGCTTCCGCTTCCGTGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 90 bp GAGGATGGCCCCATCGAGCAAGTCCCGTTGGGAGAAGGAGGTGACTaGCTGGCCATCCCGGAGCAGCTGCCCCCACTGAGGACCAGCGGT +
Preference number: 5 (lower is better)
Translates to: EDGPIEQVPLGEGGD*LAIPEQLPPLRTSG
Trigger: ACCGCTGGTCCTCAGTGGGGGCAGCTGCTCCGGGATGGCCAGTCAGTCACCTCCTTCTCCCAACGGGACTTGCTCGATGGGGCCATCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp GAAGCCCAGGAAACCACCTTTGGCCGCAGTGGGCACGGGGCTGGATaGTGCCTGGCCTGGCTGGCCAGTGGGGACGCTTCTTCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: EAQETTFGRSGHGAG*CLAWLASGDASSWF
Trigger: AAACCAGGAAGAAGCGTCCCCACTGGCCAGCCAGGCCAGGCAGCATCCAGCCCCGTGCCCACTGCGGCCAAAGGTGGTTTCCTGGGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp GCATACTGCCTGTGCGGTTGGCCAGCTCACTGGCATCGAGCACAGTaGGGTCAAGGCGCAGGGTGGTACCCTGAGGCCATGGCCCACCAG +
Preference number: 5 (lower is better)
Translates to: AYCLCGWPAHWHRAQ*GQGAGWYPEAMAHQ
Trigger: CTGGTGGGCCATGGCCTCAGGGTACCACCCTGCGCCTTGACCCCACTGTGCTCGATGCCAGTGAGCTGGCCAACCGCACAGGCAGTATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp GGAGCCGGAAGTGGGGCATACTGCCTGTGCGGTTGGCCAGCTCACTaGCATCGAGCACAGTGGGGTCAAGGCGCAGGGTGGTACCCTGAG +
Preference number: 5 (lower is better)
Translates to: GAGSGAYCLCGWPAH*HRAQWGQGAGWYPE
Trigger: CTCAGGGTACCACCCTGCGCCTTGACCCCACTGTGCTCGATGCCAGTGAGCTGGCCAACCGCACAGGCAGTATGCCCCACTTCCGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp GGCGCTGGGGACAGGCAGCATCGAAAGACACCATCACGGCCAGGGTaGCAGCCAGATCCCTGGCAGGTGGTGAGGACAGTAGGAGACCGA +
Preference number: 5 (lower is better)
Translates to: GAGDRQHRKTPSRPG*QPDPWQVVRTVGDR
Trigger: TCGGTCTCCTACTGTCCTCACCACCTGCCAGGGATCTGGCTGCCACCCTGGCCGTGATGGTGTCTTTCGATGCTGCCTGTCCCCAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp CGCGGCCAGCTCAGATTGCAGGAAGTAGGGCCTCCTGGCATGGAGTaGCTCCTCAGACACCAGGAGCTGGCCTCGGGTGGGGAACTGTGT +
Preference number: 5 (lower is better)
Translates to: RGQLRLQEVGPPGME*LLRHQELASGGELC
Trigger: ACACAGTTCCCCACCCGAGGCCAGCTCCTGGTGTCTGAGGAGCCACTCCATGCCAGGAGGCCCTACTTCCTGCAATCTGAGCTGGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp TGGCCAGCTCACTGGCATCGAGCACAGTGGGGTCAAGGCGCAGGGTaGTACCCTGAGGCCATGGCCCACCAGCCCACACATGCAACAGAG +
Preference number: 5 (lower is better)
Translates to: WPAHWHRAQWGQGAG*YPEAMAHQPTHATE
Trigger: CTCTGTTGCATGTGTGGGCTGGTGGGCCATGGCCTCAGGGTACCACCCTGCGCCTTGACCCCACTGTGCTCGATGCCAGTGAGCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGACACTGGCTAGGAGGTaGGCGGCATCAAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWTLARR*AASRAA
Trigger: GGCTGCCCTTGATGCCGCCAACCTCCTAGCCAGTGT...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGCCACACTGCTCCCATTaGCCACGAAGGCCAGTCGCC +
Preference number: 5 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWPHCSH*PRRPVA
Trigger: GGCGACTGGCCTTCGTGGCAAATGGGAGCAGTGTGG...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 90 bp TCACTGGCATCGAGCACAGTGGGGTCAAGGCGCAGGGTGGTACCCTaGGGCCATGGCCCACCAGCCCACACATGCAACAGAGCCTGCACT +
Preference number: 5 (lower is better)
Translates to: SLASSTVGSRRRVVP*GHGPPAHTCNRACT
Trigger: AGTGCAGGCTCTGTTGCATGTGTGGGCTGGTGGGCCATGGCCTCAGGGTACCACCCTGCGCCTTGACCCCACTGTGCTCGATGCCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp ACCACCTTTGGCCGCAGTGGGCACGGGGCTGGATGCTGCCTGGCCTaGCTGGCCAGTGGGGACGCTTCTTCCTGGTTTCTCTGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: TTFGRSGHGAGCCLA*LASGDASSWFLCFC
Trigger: ACAGAAACAGAGAAACCAGGAAGAAGCGTCCCCACTGGCCAGCCAGGCCAGGCAGCATCCAGCCCCGTGCCCACTGCGGCCAAAGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGCTCCTCTGCACTTCCTaGCTGGGCATGGAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ARPGYSNSGPGGWVGSIWLLCTS*LGMEES
Trigger: CGACTCCTCCATGCCCAGCAAGGAAGTGCAGAGGAG...CCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTACCCTGGTCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp AGTGTCTTCGTTTGCCTGCTCCCTAGTCTTGAGGAGAGCATGGCCACCAGGGTGGCAGCCACAGTGATCTaGGCCCGCTGGCCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SVFVCLLPSLEESMATRVAATVI*ARWPSG
Trigger: CCCCGAGGGCCAGCGGGCCAAGATCACTGTGGCTGC...CACCCTGGTGGCCATGCTCTCCTCAAGACTAGGGAGCAGGCAAACGAAGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 90 bp CTGGCACACTGGCTAGGAGGTTGGCGGCATCAAGGGCAGCCACAGTaGTCTTGGCCCGCTGGCCCTCGGGGACCCAAAGACCTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LAHWLGGWRHQGQPQ*SWPAGPRGPKDLCS
Trigger: AGAACAAAGGTCTTTGGGTCCCCGAGGGCCAGCGGGCCAAGATCACTGTGGCTGCCCTTGATGCCGCCAACCTCCTAGCCAGTGTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp TCGGGGACCCAAAGACCTTTGTTCTTCCAGAGACGGCTGGGGCGCTaGGGACAGGCAGCATCGAAAGACACCATCACGGCCAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SGTQRPLFFQRRLGR*GQAASKDTITARVA
Trigger: TGCCACCCTGGCCGTGATGGTGTCTTTCGATGCTGCCTGTCCCCAGCGCCCCAGCCGTCTCTGGAAGAACAAAGGTCTTTGGGTCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp AGGAGGTTGGCGGCATCAAGGGCAGCCACAGTGATCTTGGCCCGCTaGCCCTCGGGGACCCAAAGACCTTTGTTCTTCCAGAGACGGCTG +
Preference number: 5 (lower is better)
Translates to: RRLAASRAATVILAR*PSGTQRPLFFQRRL
Trigger: CAGCCGTCTCTGGAAGAACAAAGGTCTTTGGGTCCCCGAGGGCCAGCGGGCCAAGATCACTGTGGCTGCCCTTGATGCCGCCAACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp CGCTCATTCACGTCCCTCACAGTGATGACAAAGGCCTCAGAGGTCTaGGGTCCTGCCACAGAAGTCCCCGTCGGTCCCTGGAGGTGGGCA +
Preference number: 5 (lower is better)
Translates to: RSFTSLTVMTKASEV*GPATEVPVGPWRWA
Trigger: TGCCCACCTCCAGGGACCGACGGGGACTTCTGTGGCAGGACCCCAGACCTCTGAGGCCTTTGTCATCACTGTGAGGGACGTGAATGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp CTAGAGCTTGGGGCACCTCCAGGGGTGCACGCAGCTGCACCTCAATaGTGGATGGCAAGACATCCACAGCCAGGGACATGGGTATGGGGG +
Preference number: 5 (lower is better)
Translates to: LELGAPPGVHAAAPQ*WMARHPQPGTWVWG
Trigger: CCCCCATACCCATGTCCCTGGCTGTGGATGTCTTGCCATCCACCATTGAGGTGCAGCTGCGTGCACCCCTGGAGGTGCCCCAAGCTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 90 bp GTGGCTCCTCAGACACCAGGAGCTGGCCTCGGGTGGGGAACTGTGTaGCCTGGAAGAGTACATCATGCCGACTGCGCTGAGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: VAPQTPGAGLGWGTV*PGRVHHADCAEMLA
Trigger: TGCCAGCATCTCAGCGCAGTCGGCATGATGTACTCTTCCAGGTCACACAGTTCCCCACCCGAGGCCAGCTCCTGGTGTCTGAGGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp GGCTGGCTCCATCAGACATGCTCAACTGGAAGACGCCGGCCACACTaGTCCCATTTGCCACGAAGGCCAGTCGCCCTGCATCCACATCAG +
Preference number: 5 (lower is better)
Translates to: GWLHQTCSTGRRRPH*SHLPRRPVALHPHQ
Trigger: CTGATGTGGATGCAGGGCGACTGGCCTTCGTGGCAAATGGGAGCAGTGTGGCCGGCGTCTTCCAGTTGAGCATGTCTGATGGAGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp GAGGTACGTCCTAGAGCTTGGGGCACCTCCAGGGGTGCACGCAGCTaGACCTCAATGGTGGATGGCAAGACATCCACAGCCAGGGACATG +
Preference number: 5 (lower is better)
Translates to: EVRPRAWGTSRGARS*TSMVDGKTSTARDM
Trigger: CATGTCCCTGGCTGTGGATGTCTTGCCATCCACCATTGAGGTGCAGCTGCGTGCACCCCTGGAGGTGCCCCAAGCTCTAGGACGTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp ACGGTCAACTTCCGGGTGCCCTCCAAGGAGAGGAGTGCCTGCTTCTaGGCCACCACTCGGAAGAAATGTCCAGGAGAAGTGTGTGCGCCG +
Preference number: 5 (lower is better)
Translates to: TVNFRVPSKERSACF*ATTRKKCPGEVCAP
Trigger: CGGCGCACACACTTCTCCTGGACATTTCTTCCGAGTGGTGGCCCAGAAGCAGGCACTCCTCTCCTTGGAGGGCACCCGGAAGTTGACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp TGGCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCCTCAGAGGTCCGCATaGTGGCCCTGTAGGTCACCC +
Preference number: 5 (lower is better)
Translates to: WPLTLPVQALTVAGQCFGPQRSA*WPCRSP
Trigger: GGGTGACCTACAGGGCCACAATGCGGACCTCTGAGG...CCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCGGGGTGGACTTCCCCTTaGGGTCCCTCCAAGCCAACT +
Preference number: 5 (lower is better)
Translates to: ASNTPSPSTDSCWPVLRAGWTSP*GPSKPT
Trigger: AGTTGGCTTGGAGGGACCCAAAGGGGAAGTCCACCC...CGCCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp CAGCATCGAAAGACACCATCACGGCCAGGGTGGCAGCCAGATCCCTaGCAGGTGGTGAGGACAGTAGGAGACCGATGGTGTCATGGGCTT +
Preference number: 5 (lower is better)
Translates to: QHRKTPSRPGWQPDP*QVVRTVGDRWCHGL
Trigger: AAGCCCATGACACCATCGGTCTCCTACTGTCCTCACCACCTGCCAGGGATCTGGCTGCCACCCTGGCCGTGATGGTGTCTTTCGATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp CCTGGTGGGGGCCCCTGGCCAGGCACAGTTATGAGTGGAATAGCTTaGCCTGGCTCTACCTTTCGAAAGGTCTCTGTGTCACCGGCTAGG +
Preference number: 5 (lower is better)
Translates to: PGGGPWPGTVMSGIA*PGSTFRKVSVSPAR
Trigger: CCTAGCCGGTGACACAGAGACCTTTCGAAAGGTAGAGCCAGGCCAAGCTATTCCACTCATAACTGTGCCTGGCCAGGGGCCCCCACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GCCTCTAACACTCCCAGTCCAAGCACTGACAGTTGCTGGCCAGTGCTTCGGGCGAGGAGGTTGCGGCCATaGAGAATGGCTGAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ASNTPSPSTDSCWPVLRARRLRP*RMAEWR
Trigger: CCTCCACTCAGCCATTCTCAATGGCCGCAACCTCCT...CGCCCGAAGCACTGGCCAGCAACTGTCAGTGCTTGGACTGGGAGTGTTAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTTCTGGGCCCGAATCATaGTCTGTTCCCCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGSGPES*SVPLRA
Trigger: GGCCCTCAGGGGAACAGACAATGATTCGGGCCCAGA...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 90 bp GTGGGGAACTGTGTGACCTGGAAGAGTACATCATGCCGACTGCGCTaGGATGCTGGCACACTGGCTAGGAGGTTGGCGGCATCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: VGNCVTWKSTSCRLR*DAGTLARRLAASRA
Trigger: TGCCCTTGATGCCGCCAACCTCCTAGCCAGTGTGCCAGCATCTCAGCGCAGTCGGCATGATGTACTCTTCCAGGTCACACAGTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 90 bp CATTTGCCACGAAGGCCAGTCGCCCTGCATCCACATCAGCCTGTGTaGAGTGAGTCACAGGTCCAGTGTTGTCCCCAGCCAGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: HLPRRPVALHPHQPV*SESQVQCCPQPGSG
Trigger: TCCTGAGCCTGGCTGGGGACAACACTGGACCTGTGACTCACTTCACACAGGCTGATGTGGATGCAGGGCGACTGGCCTTCGTGGCAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp GGACAGACGGTCAACTTCCGGGTGCCCTCCAAGGAGAGGAGTGCCTaGTTCTGGGCCACCACTCGGAAGAAATGTCCAGGAGAAGTGTGT +
Preference number: 5 (lower is better)
Translates to: GQTVNFRVPSKERSA*FWATTRKKCPGEVC
Trigger: ACACACTTCTCCTGGACATTTCTTCCGAGTGGTGGCCCAGAAGCAGGCACTCCTCTCCTTGGAGGGCACCCGGAAGTTGACCGTCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp CTGGCTCTACCTTTCGAAAGGTCTCTGTGTCACCGGCTAGGCCATTaGGGGGTTTGGCGGTCAACACCTGGACATCGTGCTTGCCCGTCT +
Preference number: 5 (lower is better)
Translates to: LALPFERSLCHRLGH*GVWRSTPGHRACPS
Trigger: AGACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAGCCGGTGACACAGAGACCTTTCGAAAGGTAGAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp CGCATGGTAAGGCTCAGTGGCAAAGTCCAGCAAGGCCACAGCAGGTaGGACACCCTTTGCCCACAGCTCCAGAGTAAGTCTGTCACCTGC +
Preference number: 5 (lower is better)
Translates to: RMVRLSGKVQQGHSR*DTLCPQLQSKSVTC
Trigger: GCAGGTGACAGACTTACTCTGGAGCTGTGGGCAAAGGGTGTCCCACCTGCTGTGGCCTTGCTGGACTTTGCCACTGAGCCTTACCATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTGACAGGAAAACTCAGTaGCTGGCTCTCCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGDRKTQ*LALLAG
Trigger: ACCAGCCAGGAGAGCCAGCAACTGAGTTTTCCTGTC...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp TACAGCAACAGTGGGCCTGGTGGATGGGTGGGCAGCATCTGGTACAGGCCAGGTGTTTCTACTGACAGGTaGGCAGGCAAGATGGCTGCG +
Preference number: 5 (lower is better)
Translates to: YSNSGPGGWVGSIWYRPGVSTDR*AGKMAA
Trigger: CGCAGCCATCTTGCCTGCCAACCTGTCAGTAGAAAC...ACCTGGCCTGTACCAGATGCTGCCCACCCATCCACCAGGCCCACTGTTGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCTTTGTGCTGCACCAGTaGCAGTGGGGCCAGGGGACC +
Preference number: 5 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSFVLHQ*QWGQGT
Trigger: GGTCCCCTGGCCCCACTGCAACTGGTGCAGCACAAA...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 90 bp CTGCTGGCGTCTGCAGCTTTAGCTCCTTCTGTCCCAGGGCAAGTCTaGCCTGGAGGCATCCTGAGTGGAGCTGGAGCAAGAGATGGTCAT +
Preference number: 5 (lower is better)
Translates to: LLASAALAPSVPGQV*PGGILSGAGARDGH
Trigger: ATGACCATCTCTTGCTCCAGCTCCACTCAGGATGCCTCCAGGTCAGACTTGCCCTGGGACAGAAGGAGCTAAAGCTGCAGACGCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp ATCAGACATGCTCAACTGGAAGACGCCGGCCACACTGCTCCCATTTaGCACGAAGGCCAGTCGCCCTGCATCCACATCAGCCTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: IRHAQLEDAGHTAPI*HEGQSPCIHISLCE
Trigger: TTCACACAGGCTGATGTGGATGCAGGGCGACTGGCCTTCGTGGCAAATGGGAGCAGTGTGGCCGGCGTCTTCCAGTTGAGCATGTCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp CTAGGCCATTGCGGGGTTTGGCGGTCAACACCTGGACATCGTGCTTaGCCGTCTTGTTGCGTTTGCGGAGGTAGAAGAGCAGAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: LGHCGVWRSTPGHRA*PSCCVCGGRRAEAR
Trigger: TCTTGCCTCTGCTCTTCTACCTCCGCAAACGCAACAAGACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp GGCGTCTGCAGCTTTAGCTCCTTCTGTCCCAGGGCAAGTCTGACCTaGAGGCATCCTGAGTGGAGCTGGAGCAAGAGATGGTCATCTTGG +
Preference number: 5 (lower is better)
Translates to: GVCSFSSFCPRASLT*RHPEWSWSKRWSSW
Trigger: CCAAGATGACCATCTCTTGCTCCAGCTCCACTCAGGATGCCTCCAGGTCAGACTTGCCCTGGGACAGAAGGAGCTAAAGCTGCAGACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp GGTGAAGTTTGCAAAGACAGCAGGCAGTCCCGGCTCAGGAATACATaGCTCTGGCAGTTCCATGGCTGGCCAAGCTTCTGGTGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: GEVCKDSRQSRLRNT*LWQFHGWPSFWCQG
Trigger: ACCCTGGCACCAGAAGCTTGGCCAGCCATGGAACTGCCAGAGCCATGTATTCCTGAGCCGGGACTGCCTGCTGTCTTTGCAAACTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp CCTTTCGAAAGGTCTCTGTGTCACCGGCTAGGCCATTGCGGGGTTTaGCGGTCAACACCTGGACATCGTGCTTGCCCGTCTTGTTGCGTT +
Preference number: 5 (lower is better)
Translates to: PFERSLCHRLGHCGV*RSTPGHRACPSCCV
Trigger: AACGCAACAAGACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAGCCGGTGACACAGAGACCTTTCGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGACGCTTGTCCCCTGCTaGGAAGGCCAGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPETLVPC*EGQGCL
Trigger: CAAGCACCCCTGGCCTTCCAAGCAGGGGACAAGCGT...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTACCTACCAGGGAGATATaGGCAGCCCCCGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVPTREI*AAPGAR
Trigger: CCTGGCACCGGGGGCTGCCAATATCTCCCTGGTAGG...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp TTTGGCTCTGGAGATCCTCAGGCCAGACCAGGGTACAGCAACAGTGGGCCTGGTGTGGAAGGTATGAGGTaGTGGGCTTCCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: FGSGDPQARPGYSNSGPGVEGMR*WASLFL
Trigger: GAGGAAGAGGGAAGCCCACAACCTCATACCTTCCAC...ACCAGGCCCACTGTTGCTGTACCCTGGTCTGGCCTGAGGATCTCCAGAGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 90 bp GGCTTGCCCACCTCTAGCCCCAGCTGTCCCTCTTCCAGGTCCCGCTaGGTGAAATGTTCCACAAGTTGGTTGCTCCTAGATTCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: GLPTSSPSCPSSRSR*VKCSTSWLLLDSVR
Trigger: CCGAACAGAATCTAGGAGCAACCAACTTGTGGAACATTTCACTCAGCGGGACCTGGAAGAGGGACAGCTGGGGCTAGAGGTGGGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 90 bp AGATCCCTGGCAGGTGGTGAGGACAGTAGGAGACCGATGGTGTCATaGGCTTCCCAGAAGGGCTCAGAGGACATCTCGTGCTCATACAGA +
Preference number: 5 (lower is better)
Translates to: RSLAGGEDSRRPMVS*ASQKGSEDISCSYR
Trigger: TCTGTATGAGCACGAGATGTCCTCTGAGCCCTTCTGGGAAGCCCATGACACCATCGGTCTCCTACTGTCCTCACCACCTGCCAGGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp CCCCTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCTGCAGCTCCCCGAATaGCAAGGTACCAGTGACTCG +
Preference number: 5 (lower is better)
Translates to: PLTLAVWVRIYLRSQFQDLQLPE*QGTSDS
Trigger: CGAGTCACTGGTACCTTGCAATTCGGGGAGCTGCAG...GTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCTTCGTATGTCCAGGTaGGTGTCCAGCTGGAGCACA +
Preference number: 5 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSLRMSR*VSSWST
Trigger: TGTGCTCCAGCTGGACACCAACCTGGACATACGAAG...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCAGGCCCCCTCCCAGATTaGCAGGCCTGTGTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: GMPQEVEIQELVQICPSPGPLPD*QACVCG
Trigger: ACCACAAACACAGGCCTGCAAATCTGGGAGGGGGCC...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTAATACTGCCTGTGCGGTaGGCCAGCTCACTGGCATCG +
Preference number: 5 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVILPVR*ASSLAS
Trigger: CGATGCCAGTGAGCTGGCCAACCGCACAGGCAGTAT...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCACCTGGACATCGTGCTaGCCCGTCTTGTTGCGTTTG +
Preference number: 5 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSTWTSC*PVLLRL
Trigger: CAAACGCAACAAGACGGGCAAGCACGATGTCCAGGT...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGACTGGGAAAGACAGATaGCTCAGTGTCTCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPETGKDR*LSVSWP
Trigger: GGGCCAGGAGACACTGAGCAATCTGTCTTTCCCAGT...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATTTGTCCATCCCCATTCCTGAGGGCAGGATaGGGTGTCCGGCAAAACTGC +
Preference number: 5 (lower is better)
Translates to: GMPQEVEIQELVQICPSPFLRAG*GVRQNC
Trigger: GCAGTTTTGCCGGACACCCAATCCTGCCCTCAGGAA...TGGGGATGGACAAATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 90 bp CCGATGGTGTCATGGGCTTCCCAGAAGGGCTCAGAGGACATCTCGTaGTCATACAGAATATTCCCAGCATTTACCTCAGCCTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PMVSWASQKGSEDIS*SYRIFPAFTSAWVK
Trigger: CTTCACCCAGGCTGAGGTAAATGCTGGGAATATTCTGTATGAGCACGAGATGTCCTCTGAGCCCTTCTGGGAAGCCCATGACACCATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATAGGCTCAGGAAGCCATaGTGGGGTGCCCTCTGTACT +
Preference number: 5 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDRLRKP*WGALCT
Trigger: AGTACAGAGGGCACCCCACAATGGCTTCCTGAGCCT...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 90 bp TTCTTCCTGGTTTCTCTGTTTCTGTACGAACAGCCTCAGGGACACTaGGTAGGGCCACACTGTAGGATTTGGCCGCATGGTAAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: FFLVSLFLYEQPQGH*VGPHCRIWPHGKAQ
Trigger: CTGAGCCTTACCATGCGGCCAAATCCTACAGTGTGGCCCTACTCAGTGTCCCTGAGGCTGTTCGTACAGAAACAGAGAAACCAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GTAGAGGACTTTGGGAATGCCCCAGGAGGTGGAAATTCAAGAGCTTGTCCAGATCTGAGGACCCCACGGTaGAAAGTACGCGTAGGGTAT +
Preference number: 5 (lower is better)
Translates to: VEDFGNAPGGGNSRACPDLRTPR*KVRVGY
Trigger: ATACCCTACGCGTACTTTCAACCGTGGGGTCCTCAG...ATCTGGACAAGCTCTTGAATTTCCACCTCCTGGGGCATTCCCAAAGTCCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GGCGCTCCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCTGTTCCACAAGTTGGTaGCTCCTAGATTCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: GAPPQGFVGDMTSDLCLSCSTSW*LLDSVR
Trigger: CCGAACAGAATCTAGGAGCAACCAACTTGTGGAACA...GGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGGAGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp ACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACCCGGAGATGATGCTGAACATGTaGGCCTCTAAGAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TLAVWVRIYLRSQFQDPEMMLNM*ASKKPR
Trigger: CCTGGGCTTCTTAGAGGCCAACATGTTCAGCATCAT...CTCCGGGTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp CCCCTGACCTTGGCAGTCTGGGTCAGGATTTATCTAAGGTCACAGTTCCAGGACAGTACGCGTAGGGTATaGGTCTACAGAGATTTCCAG +
Preference number: 5 (lower is better)
Translates to: PLTLAVWVRIYLRSQFQDSTRRV*VYRDFQ
Trigger: CTGGAAATCTCTGTAGACCAATACCCTACGCGTACT...GTCCTGGAACTGTGACCTTAGATAAATCCTGACCCAGACTGCCAAGGTCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp CCACCACAGGGCTTTGTGGGTGACATGACTTCAGACCTTTGTCTATCCCGTGTAGTGCACAAACAGGACTaGCTTCTTCCTGAGATCCTC +
Preference number: 5 (lower is better)
Translates to: PPQGFVGDMTSDLCLSRVVHKQD*LLPEIL
Trigger: GAGGATCTCAGGAAGAAGCAAGTCCTGTTTGTGCAC...TACACGGGATAGACAAAGGTCTGAAGTCATGTCACCCACAAAGCCCTGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp GTGACCCATCTAGGATGCTTTCCTGTTTTCTGCAGTGAGCTGACTTTAGCTGCCGGGAACGCTGAAGTTTaGAACATCCAGGGGGATGAC +
Preference number: 5 (lower is better)
Translates to: VTHLGCFPVFCSELTLAAGNAEV*NIQGDD
Trigger: GTCATCCCCCTGGATGTTCAAAACTTCAGCGTTCCC...GGCAGCTAAAGTCAGCTCACTGCAGAAAACAGGAAAGCATCCTAGATGGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS-3UTR CAA 90 bp ACCAACCCCAGAGCAACCCCACCCATCTTGCACCTTGAATATATTAATCTATTGCTTCCTGAGATCCTCTaGGGTGAACCGGTAGATGGG +
Preference number: 5 (lower is better)
Translates to: TNPRATPPILHLEYINLLLPEIL*GEPVDG
Trigger: CCCATCTACCGGTTCACCCAAGAGGATCTCAGGAAG...CAATAGATTAATATATTCAAGGTGCAAGATGGGTGGGGTTGCTCTGGGGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp GGTCCCTGGAGGTGGGCACGGAAGCGGAAGCCATCCTaGTGCGTGCCCCCACCACCATGGGCGTACACCAGC +
Preference number: 6 (lower is better)
Translates to: GPWRWARKRKPS*CVPPPPWAYTS
Trigger: GCTGGTGTACGCCCATGGTGGTGGGGGCACGCAGCAGGATGGCTTCCGCTTCCGTGCCCACCTCCAGGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GGTCCTGCCACAGAAGTCCCCGTCGGTCCCTGGAGGTaGGCACGGAAGCGGAAGCCATCCTGCTGCGTGCCC +
Preference number: 6 (lower is better)
Translates to: GPATEVPVGPWR*ARKRKPSCCVP
Trigger: GGGCACGCAGCAGGATGGCTTCCGCTTCCGTGCCCACCTCCAGGGACCGACGGGGACTTCTGTGGCAGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp CCCTGGAGGTGGGCACGGAAGCGGAAGCCATCCTGCTaGGTGCCCCCACCACCATGGGCGTACACCAGCTGT +
Preference number: 6 (lower is better)
Translates to: PWRWARKRKPSC*VPPPPWAYTSC
Trigger: ACAGCTGGTGTACGCCCATGGTGGTGGGGGCACGCAGCAGGATGGCTTCCGCTTCCGTGCCCACCTCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp GAAACCACCTTTGGCCGCAGTGGGCACGGGGCTGGATaGTGCCTGGCCTGGCTGGCCAGTGGGGACGCTTCT +
Preference number: 6 (lower is better)
Translates to: ETTFGRSGHGAG*CLAWLASGDAS
Trigger: AGAAGCGTCCCCACTGGCCAGCCAGGCCAGGCAGCATCCAGCCCCGTGCCCACTGCGGCCAAAGGTGGTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GTCTGGGGTCCTGCCACAGAAGTCCCCGTCGGTCCCTaGAGGTGGGCACGGAAGCGGAAGCCATCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VWGPATEVPVGP*RWARKRKPSCC
Trigger: GCAGCAGGATGGCTTCCGCTTCCGTGCCCACCTCCAGGGACCGACGGGGACTTCTGTGGCAGGACCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp TGGTCTACCTGCAGCTGGCTGAAGGCGGAGGCAGGCTaGCCCCCTACTAGTAGCTGCCCATACAGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: WSTCSWLKAEAG*PPTSSCPYRGP
Trigger: GGGGCCCCTGTATGGGCAGCTACTAGTAGGGGGGCAGCCTGCCTCCGCCTTCAGCCAGCTGCAGGTAGACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp AGCGGGGTCCTGCCAGGAGCCGGAAGTGGGGCATACTaGCTGTGCGGTTGGCCAGCTCACTGGCATCGAGCA +
Preference number: 6 (lower is better)
Translates to: SGVLPGAGSGAY*LCGWPAHWHRA
Trigger: TGCTCGATGCCAGTGAGCTGGCCAACCGCACAGGCAGTATGCCCCACTTCCGGCTCCTGGCAGGACCCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp TTGGGACACTCGGACCACACGGCCATAGCGGGGTCCTaGCAGGAGCCGGAAGTGGGGCATACTGCCTGTGCG +
Preference number: 6 (lower is better)
Translates to: LGHSDHTAIAGS*QEPEVGHTACA
Trigger: CGCACAGGCAGTATGCCCCACTTCCGGCTCCTGGCAGGACCCCGCTATGGCCGTGTGGTCCGAGTGTCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp CCCATCGAGCAAGTCCCGTTGGGAGAAGGAGGTGACTaGCTGGCCATCCCGGAGCAGCTGCCCCCACTGAGG +
Preference number: 6 (lower is better)
Translates to: PIEQVPLGEGGD*LAIPEQLPPLR
Trigger: CCTCAGTGGGGGCAGCTGCTCCGGGATGGCCAGTCAGTCACCTCCTTCTCCCAACGGGACTTGCTCGATGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp TGGCTAGGAGGTTGGCGGCATCAAGGGCAGCCACAGTaGTCTTGGCCCGCTGGCCCTCGGGGACCCAAAGAC +
Preference number: 6 (lower is better)
Translates to: WLGGWRHQGQPQ*SWPAGPRGPKD
Trigger: GTCTTTGGGTCCCCGAGGGCCAGCGGGCCAAGATCACTGTGGCTGCCCTTGATGCCGCCAACCTCCTAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp GTCCTGCCAGGAGCCGGAAGTGGGGCATACTGCCTGTaGGGTTGGCCAGCTCACTGGCATCGAGCACAGTGG +
Preference number: 6 (lower is better)
Translates to: VLPGAGSGAYCL*GWPAHWHRAQW
Trigger: CCACTGTGCTCGATGCCAGTGAGCTGGCCAACCGCACAGGCAGTATGCCCCACTTCCGGCTCCTGGCAGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp AGCTGCTGCCGGCTCAGTGAGGTACGTCCTAGAGCTTaGGGCACCTCCAGGGGTGCACGCAGCTGCACCTCA +
Preference number: 6 (lower is better)
Translates to: SCCRLSEVRPRA*GTSRGARSCTS
Trigger: TGAGGTGCAGCTGCGTGCACCCCTGGAGGTGCCCCAAGCTCTAGGACGTACCTCACTGAGCCGGCAGCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp CACTGGCATCGAGCACAGTGGGGTCAAGGCGCAGGGTaGTACCCTGAGGCCATGGCCCACCAGCCCACACAT +
Preference number: 6 (lower is better)
Translates to: HWHRAQWGQGAG*YPEAMAHQPTH
Trigger: ATGTGTGGGCTGGTGGGCCATGGCCTCAGGGTACCACCCTGCGCCTTGACCCCACTGTGCTCGATGCCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp CTGTGCGGTTGGCCAGCTCACTGGCATCGAGCACAGTaGGGTCAAGGCGCAGGGTGGTACCCTGAGGCCATG +
Preference number: 6 (lower is better)
Translates to: LCGWPAHWHRAQ*GQGAGWYPEAM
Trigger: CATGGCCTCAGGGTACCACCCTGCGCCTTGACCCCACTGTGCTCGATGCCAGTGAGCTGGCCAACCGCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp AGTGGGGCATACTGCCTGTGCGGTTGGCCAGCTCACTaGCATCGAGCACAGTGGGGTCAAGGCGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: SGAYCLCGWPAH*HRAQWGQGAGW
Trigger: CCACCCTGCGCCTTGACCCCACTGTGCTCGATGCCAGTGAGCTGGCCAACCGCACAGGCAGTATGCCCCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp GCCAGGAGCCGGAAGTGGGGCATACTGCCTGTGCGGTaGGCCAGCTCACTGGCATCGAGCACAGTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: ARSRKWGILPVR*ASSLASSTVGS
Trigger: TGACCCCACTGTGCTCGATGCCAGTGAGCTGGCCAACCGCACAGGCAGTATGCCCCACTTCCGGCTCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 90 bp CCCACCACCATGGGCGTACACCAGCTGTCCCGCGGCCAGCTCAGATaGCAGGAAGTAGGGCCTCCTGGCATGGAGTGGCTCCTCAGACAC +
Preference number: 6 (lower is better)
Translates to: PTTMGVHQLSRGQLR*QEVGPPGMEWLLRH
Trigger: GTGTCTGAGGAGCCACTCCATGCCAGGAGGCCCTACTTCCTGCAATCTGAGCTGGCCGCGGGACAGCTGGTGTACGCCCATGGTGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp CATCGGAGGTCAGCGGACGGAGGAGGTTGCGGCCATTaGGAATGGCTGAGTGGAGGCAGCCCCTTAGGGGTC +
Preference number: 6 (lower is better)
Translates to: HRRSADGGGCGH*EWLSGGSPLGV
Trigger: GACCCCTAAGGGGCTGCCTCCACTCAGCCATTCTCAATGGCCGCAACCTCCTCCGTCCGCTGACCTCCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp TCGAGCACAGTGGGGTCAAGGCGCAGGGTGGTACCCTaGGGCCATGGCCCACCAGCCCACACATGCAACAGA +
Preference number: 6 (lower is better)
Translates to: SSTVGSRRRVVP*GHGPPAHTCNR
Trigger: TCTGTTGCATGTGTGGGCTGGTGGGCCATGGCCTCAGGGTACCACCCTGCGCCTTGACCCCACTGTGCTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp CTCAGATTGCAGGAAGTAGGGCCTCCTGGCATGGAGTaGCTCCTCAGACACCAGGAGCTGGCCTCGGGTGGG +
Preference number: 6 (lower is better)
Translates to: LRLQEVGPPGME*LLRHQELASGG
Trigger: CCCACCCGAGGCCAGCTCCTGGTGTCTGAGGAGCCACTCCATGCCAGGAGGCCCTACTTCCTGCAATCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GGGGCACCTCCAGGGGTGCACGCAGCTGCACCTCAATaGTGGATGGCAAGACATCCACAGCCAGGGACATGG +
Preference number: 6 (lower is better)
Translates to: GAPPGVHAAAPQ*WMARHPQPGTW
Trigger: CCATGTCCCTGGCTGTGGATGTCTTGCCATCCACCATTGAGGTGCAGCTGCGTGCACCCCTGGAGGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp CCAGGAGCCGGAAGTGGGGCATACTGCCTGTGCGGTTaGCCAGCTCACTGGCATCGAGCACAGTGGGGTCAA +
Preference number: 6 (lower is better)
Translates to: PGAGSGAYCLCG*PAHWHRAQWGQ
Trigger: TTGACCCCACTGTGCTCGATGCCAGTGAGCTGGCCAACCGCACAGGCAGTATGCCCCACTTCCGGCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp AGGAGGTTGGCGGCATCAAGGGCAGCCACAGTGATCTaGGCCCGCTGGCCCTCGGGGACCCAAAGACCTTTG +
Preference number: 6 (lower is better)
Translates to: RRLAASRAATVI*ARWPSGTQRPL
Trigger: CAAAGGTCTTTGGGTCCCCGAGGGCCAGCGGGCCAAGATCACTGTGGCTGCCCTTGATGCCGCCAACCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp ATGGGCGTACACCAGCTGTCCCGCGGCCAGCTCAGATaGCAGGAAGTAGGGCCTCCTGGCATGGAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: MGVHQLSRGQLR*QEVGPPGMEWL
Trigger: GAGCCACTCCATGCCAGGAGGCCCTACTTCCTGCAATCTGAGCTGGCCGCGGGACAGCTGGTGTACGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp GCTCAACTGGAAGACGCCGGCCACACTGCTCCCATTTaGCACGAAGGCCAGTCGCCCTGCATCCACATCAGC +
Preference number: 6 (lower is better)
Translates to: AQLEDAGHTAPI*HEGQSPCIHIS
Trigger: GCTGATGTGGATGCAGGGCGACTGGCCTTCGTGGCAAATGGGAGCAGTGTGGCCGGCGTCTTCCAGTTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GCGGCATCAAGGGCAGCCACAGTGATCTTGGCCCGCTaGCCCTCGGGGACCCAAAGACCTTTGTTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: AASRAATVILAR*PSGTQRPLFFQ
Trigger: CTGGAAGAACAAAGGTCTTTGGGTCCCCGAGGGCCAGCGGGCCAAGATCACTGTGGCTGCCCTTGATGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp ACGTCCCTCACAGTGATGACAAAGGCCTCAGAGGTCTaGGGTCCTGCCACAGAAGTCCCCGTCGGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: TSLTVMTKASEV*GPATEVPVGPW
Trigger: CCAGGGACCGACGGGGACTTCTGTGGCAGGACCCCAGACCTCTGAGGCCTTTGTCATCACTGTGAGGGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp ACATGTTGGCCTCTAAGAAGCCCAGGAAACCACCTTTaGCCGCAGTGGGCACGGGGCTGGATGCTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: TCWPLRSPGNHL*PQWARGWMLPG
Trigger: GCCAGGCAGCATCCAGCCCCGTGCCCACTGCGGCCAAAGGTGGTTTCCTGGGCTTCTTAGAGGCCAACATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp CCGGCTAGGCCATTGCGGGGTTTGGCGGTCAACACCTaGACATCGTGCTTGCCCGTCTTGTTGCGTTTGCGG +
Preference number: 6 (lower is better)
Translates to: PARPLRGLAVNT*TSCLPVLLRLR
Trigger: CCGCAAACGCAACAAGACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp ACATCGGAGGTCAGCGGACGGAGGAGGTTGCGGCCATaGAGAATGGCTGAGTGGAGGCAGCCCCTTAGGGGT +
Preference number: 6 (lower is better)
Translates to: TSEVSGRRRLRP*RMAEWRQPLRG
Trigger: ACCCCTAAGGGGCTGCCTCCACTCAGCCATTCTCAATGGCCGCAACCTCCTCCGTCCGCTGACCTCCGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 90 bp ACACTGGCTAGGAGGTTGGCGGCATCAAGGGCAGCCACAGTGATCTaGGCCCGCTGGCCCTCGGGGACCCAAAGACCTTTGTTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: TLARRLAASRAATVI*ARWPSGTQRPLFFQ
Trigger: CTGGAAGAACAAAGGTCTTTGGGTCCCCGAGGGCCAGCGGGCCAAGATCACTGTGGCTGCCCTTGATGCCGCCAACCTCCTAGCCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp GGCCTGCAGGTCACTCTGGCTGAAGCTCTCGCCGTCTaGCAGCCTTGTACCCTGAAGCAGGAGGTTGCCTCT +
Preference number: 6 (lower is better)
Translates to: GLQVTLAEALAV*QPCTLKQEVAS
Trigger: AGAGGCAACCTCCTGCTTCAGGGTACAAGGCTGTCAGACGGCGAGAGCTTCAGCCAGAGTGACCTGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp CAGACACCAGGAGCTGGCCTCGGGTGGGGAACTGTGTaGCCTGGAAGAGTACATCATGCCGACTGCGCTGAG +
Preference number: 6 (lower is better)
Translates to: QTPGAGLGWGTV*PGRVHHADCAE
Trigger: CTCAGCGCAGTCGGCATGATGTACTCTTCCAGGTCACACAGTTCCCCACCCGAGGCCAGCTCCTGGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp GCCAGTCGCCCTGCATCCACATCAGCCTGTGTGAAGTaGGTCACAGGTCCAGTGTTGTCCCCAGCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: ASRPASTSACVK*VTGPVLSPARL
Trigger: GAGCCTGGCTGGGGACAACACTGGACCTGTGACTCACTTCACACAGGCTGATGTGGATGCAGGGCGACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp TGGGGATGTGACCCGGAAACGGAAGGAGTCATCGGCTaGCTCAGAGGTCCGCATTGTGGCCCTGTAGGTCAC +
Preference number: 6 (lower is better)
Translates to: WGCDPETEGVIG*LRGPHCGPVGH
Trigger: GTGACCTACAGGGCCACAATGCGGACCTCTGAGGCAGCCGATGACTCCTTCCGTTTCCGGGTCACATCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GACAGCAGGCAGTCCCGGCTCAGGAATACATGGCTCTaGCAGTTCCATGGCTGGCCAAGCTTCTGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: DSRQSRLRNTWL*QFHGWPSFWCQ
Trigger: CTGGCACCAGAAGCTTGGCCAGCCATGGAACTGCCAGAGCCATGTATTCCTGAGCCGGGACTGCCTGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp AAGACACCATCACGGCCAGGGTGGCAGCCAGATCCCTaGCAGGTGGTGAGGACAGTAGGAGACCGATGGTGT +
Preference number: 6 (lower is better)
Translates to: KTPSRPGWQPDP*QVVRTVGDRWC
Trigger: ACACCATCGGTCTCCTACTGTCCTCACCACCTGCCAGGGATCTGGCTGCCACCCTGGCCGTGATGGTGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GACAGGCAGCATCGAAAGACACCATCACGGCCAGGGTaGCAGCCAGATCCCTGGCAGGTGGTGAGGACAGTA +
Preference number: 6 (lower is better)
Translates to: DRQHRKTPSRPG*QPDPWQVVRTV
Trigger: TACTGTCCTCACCACCTGCCAGGGATCTGGCTGCCACCCTGGCCGTGATGGTGTCTTTCGATGCTGCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp CGGGGACCCAAAGACCTTTGTTCTTCCAGAGACGGCTaGGGCGCTGGGGACAGGCAGCATCGAAAGACACCA +
Preference number: 6 (lower is better)
Translates to: RGPKDLCSSRDG*GAGDRQHRKTP
Trigger: TGGTGTCTTTCGATGCTGCCTGTCCCCAGCGCCCCAGCCGTCTCTGGAAGAACAAAGGTCTTTGGGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GTACATCATGCCGACTGCGCTGAGATGCTGGCACACTaGCTAGGAGGTTGGCGGCATCAAGGGCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: VHHADCAEMLAH*LGGWRHQGQPQ
Trigger: CTGTGGCTGCCCTTGATGCCGCCAACCTCCTAGCCAGTGTGCCAGCATCTCAGCGCAGTCGGCATGATGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GCACCTCCAGGGGTGCACGCAGCTGCACCTCAATGGTaGATGGCAAGACATCCACAGCCAGGGACATGGGTA +
Preference number: 6 (lower is better)
Translates to: APPGVHAAAPQW*MARHPQPGTWV
Trigger: TACCCATGTCCCTGGCTGTGGATGTCTTGCCATCCACCATTGAGGTGCAGCTGCGTGCACCCCTGGAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp AGGTCTCTGTGTCACCGGCTAGGCCATTGCGGGGTTTaGCGGTCAACACCTGGACATCGTGCTTGCCCGTCT +
Preference number: 6 (lower is better)
Translates to: RSLCHRLGHCGV*RSTPGHRACPS
Trigger: AGACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAGCCGGTGACACAGAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp TGCTCAACTGGAAGACGCCGGCCACACTGCTCCCATTaGCCACGAAGGCCAGTCGCCCTGCATCCACATCAG +
Preference number: 6 (lower is better)
Translates to: CSTGRRRPHCSH*PRRPVALHPHQ
Trigger: CTGATGTGGATGCAGGGCGACTGGCCTTCGTGGCAAATGGGAGCAGTGTGGCCGGCGTCTTCCAGTTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp AACATGTTGGCCTCTAAGAAGCCCAGGAAACCACCTTaGGCCGCAGTGGGCACGGGGCTGGATGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: NMLASKKPRKPP*AAVGTGLDAAW
Trigger: CCAGGCAGCATCCAGCCCCGTGCCCACTGCGGCCAAAGGTGGTTTCCTGGGCTTCTTAGAGGCCAACATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp AAGGTCTCTGTGTCACCGGCTAGGCCATTGCGGGGTTaGGCGGTCAACACCTGGACATCGTGCTTGCCCGTC +
Preference number: 6 (lower is better)
Translates to: KVSVSPARPLRG*AVNTWTSCLPV
Trigger: GACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAGCCGGTGACACAGAGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 90 bp CCTGGCTCTACCTTTCGAAAGGTCTCTGTGTCACCGGCTAGGCCATaGCGGGGTTTGGCGGTCAACACCTGGACATCGTGCTTGCCCGTC +
Preference number: 6 (lower is better)
Translates to: PGSTFRKVSVSPARP*RGLAVNTWTSCLPV
Trigger: GACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAGCCGGTGACACAGAGACCTTTCGAAAGGTAGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp CGAAGGCCAGTCGCCCTGCATCCACATCAGCCTGTGTaGAGTGAGTCACAGGTCCAGTGTTGTCCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: RRPVALHPHQPV*SESQVQCCPQP
Trigger: TGGCTGGGGACAACACTGGACCTGTGACTCACTTCACACAGGCTGATGTGGATGCAGGGCGACTGGCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp GTCAACTTCCGGGTGCCCTCCAAGGAGAGGAGTGCCTaGTTCTGGGCCACCACTCGGAAGAAATGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: VNFRVPSKERSA*FWATTRKKCPG
Trigger: TCCTGGACATTTCTTCCGAGTGGTGGCCCAGAAGCAGGCACTCCTCTCCTTGGAGGGCACCCGGAAGTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp CATCAGACATGCTCAACTGGAAGACGCCGGCCACACTaGTCCCATTTGCCACGAAGGCCAGTCGCCCTGCAT +
Preference number: 6 (lower is better)
Translates to: HQTCSTGRRRPH*SHLPRRPVALH
Trigger: ATGCAGGGCGACTGGCCTTCGTGGCAAATGGGAGCAGTGTGGCCGGCGTCTTCCAGTTGAGCATGTCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp TTCCGGGTGCCCTCCAAGGAGAGGAGTGCCTGCTTCTaGGCCACCACTCGGAAGAAATGTCCAGGAGAAGTG +
Preference number: 6 (lower is better)
Translates to: FRVPSKERSACF*ATTRKKCPGEV
Trigger: CACTTCTCCTGGACATTTCTTCCGAGTGGTGGCCCAGAAGCAGGCACTCCTCTCCTTGGAGGGCACCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GCAGGTGGTGAGGACAGTAGGAGACCGATGGTGTCATaGGCTTCCCAGAAGGGCTCAGAGGACATCTCGTGC +
Preference number: 6 (lower is better)
Translates to: AGGEDSRRPMVS*ASQKGSEDISC
Trigger: GCACGAGATGTCCTCTGAGCCCTTCTGGGAAGCCCATGACACCATCGGTCTCCTACTGTCCTCACCACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GATCCCTGGCAGGTGGTGAGGACAGTAGGAGACCGATaGTGTCATGGGCTTCCCAGAAGGGCTCAGAGGACA +
Preference number: 6 (lower is better)
Translates to: DPWQVVRTVGDR*CHGLPRRAQRT
Trigger: TGTCCTCTGAGCCCTTCTGGGAAGCCCATGACACCATCGGTCTCCTACTGTCCTCACCACCTGCCAGGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GAAGAGAAGTTGGTGAAGACAAAGACCACGTCCCCCTaGTCTACCTGCAGCTGGCTGAAGGCGGAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: EEKLVKTKTTSP*STCSWLKAEAG
Trigger: GCCTGCCTCCGCCTTCAGCCAGCTGCAGGTAGACCAGGGGGACGTGGTCTTTGTCTTCACCAACTTCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp TGCCTGGCCTGGCTGGCCAGTGGGGACGCTTCTTCCTaGTTTCTCTGTTTCTGTACGAACAGCCTCAGGGAC +
Preference number: 6 (lower is better)
Translates to: CLAWLASGDASS*FLCFCTNSLRD
Trigger: GTCCCTGAGGCTGTTCGTACAGAAACAGAGAAACCAGGAAGAAGCGTCCCCACTGGCCAGCCAGGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp CCAGCCGTGGTCGGCCCCCGAGTGCACAAACAGGACTaGCTTCTTCCTGAGATCCTCTTGGGTGAACCGGTA +
Preference number: 6 (lower is better)
Translates to: PAVVGPRVHKQD*LLPEILLGEPV
Trigger: TACCGGTTCACCCAAGAGGATCTCAGGAAGAAGCAAGTCCTGTTTGTGCACTCGGGGGCCGACCACGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 90 bp CTGCCATTAACACTGAAATCTTCTATGCAGCCTACCAGGGAGATATaGGCAGCCCCCGGTGCCAGGCCCAGACGGTGCTCTTGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LPLTLKSSMQPTREI*AAPGARPRRCSWRW
Trigger: CCACCTCCAAGAGCACCGTCTGGGCCTGGCACCGGGGGCTGCCAATATCTCCCTGGTAGGCTGCATAGAAGATTTCAGTGTTAATGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 90 bp ACCTTTCGAAAGGTCTCTGTGTCACCGGCTAGGCCATTGCGGGGTTaGGCGGTCAACACCTGGACATCGTGCTTGCCCGTCTTGTTGCGT +
Preference number: 6 (lower is better)
Translates to: TFRKVSVSPARPLRG*AVNTWTSCLPVLLR
Trigger: ACGCAACAAGACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAGCCGGTGACACAGAGACCTTTCGAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp TTCTTCATATTCATCCTCCTCAGGCCTGCATCCTGCTaGCATGTCACGGGTCAGCCAGGCATCCCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: FFIFILLRPASC*HVTGQPGIPEA
Trigger: GGCCTCCGGGATGCCTGGCTGACCCGTGACATGTCAGCAGGATGCAGGCCTGAGGAGGATGAATATGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp TGTGTGACCTGGAAGAGTACATCATGCCGACTGCGCTaGGATGCTGGCACACTGGCTAGGAGGTTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: CVTWKSTSCRLR*DAGTLARRLAA
Trigger: TGCCGCCAACCTCCTAGCCAGTGTGCCAGCATCTCAGCGCAGTCGGCATGATGTACTCTTCCAGGTCACACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp TGCGGGGTTTGGCGGTCAACACCTGGACATCGTGCTTaGCCGTCTTGTTGCGTTTGCGGAGGTAGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: CGVWRSTPGHRA*PSCCVCGGRRA
Trigger: TGCTCTTCTACCTCCGCAAACGCAACAAGACGGGCAAGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp CCTTTCGAAAGGTCTCTGTGTCACCGGCTAGGCCATTaGGGGGTTTGGCGGTCAACACCTGGACATCGTGCT +
Preference number: 6 (lower is better)
Translates to: PFERSLCHRLGH*GVWRSTPGHRA
Trigger: AGCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAGCCGGTGACACAGAGACCTTTCGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GAAGAGCCCGTAGGTGGCCTTGAGGTGGGATGCTCTTaGGATGGGAGCAGAGGTGTTCAACACTCCGTCAAC +
Preference number: 6 (lower is better)
Translates to: EEPVGGLEVGCS*DGSRGVQHSVN
Trigger: GTTGACGGAGTGTTGAACACCTCTGCTCCCATCCCAAGAGCATCCCACCTCAAGGCCACCTACGGGCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp TGCAAAGACAGCAGGCAGTCCCGGCTCAGGAATACATaGCTCTGGCAGTTCCATGGCTGGCCAAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: CKDSRQSRLRNT*LWQFHGWPSFW
Trigger: CCAGAAGCTTGGCCAGCCATGGAACTGCCAGAGCCATGTATTCCTGAGCCGGGACTGCCTGCTGTCTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp AGGCTCAGTGGCAAAGTCCAGCAAGGCCACAGCAGGTaGGACACCCTTTGCCCACAGCTCCAGAGTAAGTCT +
Preference number: 6 (lower is better)
Translates to: RLSGKVQQGHSR*DTLCPQLQSKS
Trigger: AGACTTACTCTGGAGCTGTGGGCAAAGGGTGTCCCACCTGCTGTGGCCTTGCTGGACTTTGCCACTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp CCACACTGTAGGATTTGGCCGCATGGTAAGGCTCAGTaGCAAAGTCCAGCAAGGCCACAGCAGGTGGGACAC +
Preference number: 6 (lower is better)
Translates to: PHCRIWPHGKAQ*QSPARPQQVGH
Trigger: GTGTCCCACCTGCTGTGGCCTTGCTGGACTTTGCCACTGAGCCTTACCATGCGGCCAAATCCTACAGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp ACCTTTCGAAAGGTCTCTGTGTCACCGGCTAGGCCATaGCGGGGTTTGGCGGTCAACACCTGGACATCGTGC +
Preference number: 6 (lower is better)
Translates to: TFRKVSVSPARP*RGLAVNTWTSC
Trigger: GCACGATGTCCAGGTGTTGACCGCCAAACCCCGCAATGGCCTAGCCGGTGACACAGAGACCTTTCGAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 90 bp AGGAGCAGGAGGATCAGGCACACCGGAATGATGATGCTGAACATGTaGGCCTCTAAGAAGCCCAGGAAACCACCTTTGGCCGCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: RSRRIRHTGMMMLNM*ASKKPRKPPLAAVG
Trigger: GCCCACTGCGGCCAAAGGTGGTTTCCTGGGCTTCTTAGAGGCCAACATGTTCAGCATCATCATTCCGGTGTGCCTGATCCTCCTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp GACATGTCACGGGTCAGCCAGGCATCCCGGAGGCCCTaGCTCCTGCCATTAACACTGAAATCTTCTATGCAG +
Preference number: 6 (lower is better)
Translates to: DMSRVSQASRRP*LLPLTLKSSMQ
Trigger: CTGCATAGAAGATTTCAGTGTTAATGGCAGGAGGCAGGGCCTCCGGGATGCCTGGCTGACCCGTGACATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp GGGCCCCTGGCCAGGCACAGTTATGAGTGGAATAGCTaGGCCTGGCTCTACCTTTCGAAAGGTCTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: GPLARHSYEWNS*AWLYLSKGLCV
Trigger: GACACAGAGACCTTTCGAAAGGTAGAGCCAGGCCAAGCTATTCCACTCATAACTGTGCCTGGCCAGGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp CGCGTAGGGTATTGGTCTACAGAGATTTCCAGCCGGTaGACATCTATGTGTACGCTGACCTCGTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RVGYWSTEISSR*TSMCTLTSWGC
Trigger: GCAGCCCCACGAGGTCAGCGTACACATAGATGTTCACCGGCTGGAAATCTCTGTAGACCAATACCCTACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp CTGGCCAGGCACAGTTATGAGTGGAATAGCTTGGCCTaGCTCTACCTTTCGAAAGGTCTCTGTGTCACCGGC +
Preference number: 6 (lower is better)
Translates to: LARHSYEWNSLA*LYLSKGLCVTG
Trigger: GCCGGTGACACAGAGACCTTTCGAAAGGTAGAGCCAGGCCAAGCTATTCCACTCATAACTGTGCCTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp GGCCCCTGGCCAGGCACAGTTATGAGTGGAATAGCTTaGCCTGGCTCTACCTTTCGAAAGGTCTCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: GPWPGTVMSGIA*PGSTFRKVSVS
Trigger: TGACACAGAGACCTTTCGAAAGGTAGAGCCAGGCCAAGCTATTCCACTCATAACTGTGCCTGGCCAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp ACCTCTAGCCCCAGCTGTCCCTCTTCCAGGTCCCGCTaGGTGAAATGTTCCACAAGTTGGTTGCTCCTAGAT +
Preference number: 6 (lower is better)
Translates to: TSSPSCPSSRSR*VKCSTSWLLLD
Trigger: ATCTAGGAGCAACCAACTTGTGGAACATTTCACTCAGCGGGACCTGGAAGAGGGACAGCTGGGGCTAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CCA 72 bp CCAGTGTTGTCCCCAGCCAGGCTCAGGAAGCCATTGTaGGGTGCCCTCTGTACTTCATATTCAATTTCCCCT +
Preference number: 6 (lower is better)
Translates to: PVLSPARLRKPL*GALCTSYSISP
Trigger: AGGGGAAATTGAATATGAAGTACAGAGGGCACCCCACAATGGCTTCCTGAGCCTGGCTGGGGACAACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp GGTCCAGTGTTGTCCCCAGCCAGGCTCAGGAAGCCATaGTGGGGTGCCCTCTGTACTTCATATTCAATTTCC +
Preference number: 6 (lower is better)
Translates to: GPVLSPARLRKP*WGALCTSYSIS
Trigger: GGAAATTGAATATGAAGTACAGAGGGCACCCCACAATGGCTTCCTGAGCCTGGCTGGGGACAACACTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS GCA 72 bp CATAGACCTCTTCTTCATATTCATCCTCCTCAGGCCTaGATCCTGCTGACATGTCACGGGTCAGCCAGGCAT +
Preference number: 6 (lower is better)
Translates to: HRPLLHIHPPQA*ILLTCHGSARH
Trigger: ATGCCTGGCTGACCCGTGACATGTCAGCAGGATGCAGGCCTGAGGAGGATGAATATGAAGAAGAGGTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp AGGATCAGGCACACCGGAATGATGATGCTGAACATGTaGGCCTCTAAGAAGCCCAGGAAACCACCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: RIRHTGMMMLNM*ASKKPRKPPLA
Trigger: GGCCAAAGGTGGTTTCCTGGGCTTCTTAGAGGCCAACATGTTCAGCATCATCATTCCGGTGTGCCTGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS CAA 72 bp GCTGAGGACCCCACGGTTGAAAGTACGCGTAGGGTATaGGTCTACAGAGATTTCCAGCCGGTGAACATCTAT +
Preference number: 6 (lower is better)
Translates to: AEDPTVESTRRV*VYRDFQPVNIY
Trigger: ATAGATGTTCACCGGCTGGAAATCTCTGTAGACCAATACCCTACGCGTACTTTCAACCGTGGGGTCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7
CDS TCA 72 bp CATACAGAATATTCCCAGCATTTACCTCAGCCTGGGTaGAGTTCACCAAGACCTCCTCTGCACTTCCTTGCT +
Preference number: 6 (lower is better)
Translates to: HTEYSQHLPQPG*SSPRPPLHFLA
Trigger: AGCAAGGAAGTGCAGAGGAGGTCTTGGTGAACTTCACCCAGGCTGAGGTAAATGCTGGGAATATTCTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035661.7