Pregenerated sensors for CSNK2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024387Ensembl transcript IDs: ENSMUST00000025246.13, ENSMUST00000172765.9, ENSMUST00000173114.8, ENSMUST00000173633.3, ENSMUST00000174024.8, ENSMUST00000174306.8, ENSMUST00000174779.8
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCGATGCCTCGGTTGGTaGGGATGTAGCGGGCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGRCLGW*GCSGRG Trigger: TCCACGCCCGCTACATCCTCACCAACCGAGGCATCG...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR GCA 90 bp | GGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCAACCAGTGCCGAAGTATaGGCCGTCCGTGTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GWQQRNGGVTDRGRGGWATSAEV*AVRVVV Trigger: CACCACCACACGGACGGCGCATACTTCGGCACTGGT...TGCCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCAGGTTGGCAGGTCGCTTaGGCCGGTACTCTGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: GWQQRNGGVTDRGRGGWAGWQVA*AGTLDA Trigger: TGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACC...TGCCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCATATGCGCCGTCCGTGTaGTGGTGTCTGGAGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GWQQRNGGVTDRGRGGWAYAPSV*WCLEDL Trigger: CAAGTCCTCCAGACACCACCACACGGACGGCGCATA...TGCCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR GCA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGACCAGTGCCGAAGTATaGGCCGTCCGTGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGTSAEV*AVRVVV Trigger: CACCACCACACGGACGGCGCATACTTCGGCACTGGT...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR GCA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGTGTGAGGGAAACCAGTaGCGAAGTATGCGCCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGCEGNQ*RSMRRP Trigger: CGGACGGCGCATACTTCGGCACTGGTTTCCCTCACA...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCAGGTGTCTGGAGGACTTaGGTGTGTACACGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GWQQRNGGVTDRGRGGWAGVWRT*VCTRPC Trigger: GCATGGACGTGTACACACCCAAGTCCTCCAGACACC...TGCCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGTATGCGCCGTCCGTGTaGTGGTGTCTGGAGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGYAPSV*WCLEDL Trigger: CAAGTCCTCCAGACACCACCACACGGACGGCGCATA...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGGTTGGCAGGTCGCTTaGGCCGGTACTCTGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWGWQVA*AGTLDA Trigger: TGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACC...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR GCA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGTGAGGGAAACCAGTaGCGAAGTATGCGCCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGCEGNQ*RSMRRP Trigger: CGGACGGCGCATACTTCGGCACTGGTTTCCCTCACA...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGGGTGTCTGGAGGACTTaGGTGTGTACACGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGGVWRT*VCTRPC Trigger: GCATGGACGTGTACACACCCAAGTCCTCCAGACACC...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTATGCGCCGTCCGTGTaGTGGTGTCTGGAGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGYAPSV*WCLEDL Trigger: CAAGTCCTCCAGACACCACCACACGGACGGCGCATA...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCTTGGGCCGGTACTCTaGATGCACCATGAAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGLGPVL*MHHEEH Trigger: ATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAG...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR TCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGCGATGCCTCGGTTGGTaGGGATGTAGCGGGCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQRCLGW*GCSGRG Trigger: TCCACGCCCGCTACATCCTCACCAACCGAGGCATCG...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR TCA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGTMKSM*GKPVPK Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGTCAAGTCGCTCTGGTTaGGGTTGTCTTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGSSRSG*GCLPAL Trigger: AAGAGCTGGAAGACAACCCCAACCAGAGCGACTTGA...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGACACGTCCATGCACTTaGGGCAGTAGAGTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGTRPCT*GSRVSP Trigger: TGGTGAAACTCTACTGCCCCAAGTGCATGGACGTGT...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR GCA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGGTGTGTACACGTCCATaGACTTGGGGCAGTAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGVCTRP*TWGSRV Trigger: AACTCTACTGCCCCAAGTGCATGGACGTGTACACAC...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR GCA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGTGTGTACACGTCCATaGACTTGGGGCAGTAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWVCTRP*TWGSRV Trigger: AACTCTACTGCCCCAAGTGCATGGACGTGTACACAC...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTCAAGTCGCTCTGGTTaGGGTTGTCTTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGSSRSG*GCLPAL Trigger: AAGAGCTGGAAGACAACCCCAACCAGAGCGACTTGA...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGACACGTCCATGCACTTaGGGCAGTAGAGTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWTRPCT*GSRVSP Trigger: TGGTGAAACTCTACTGCCCCAAGTGCATGGACGTGT...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCGAATAGTCTTGACTaGGCTCTTGAAGTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWANSLD*ALEVAG Trigger: GCCAGCAACTTCAAGAGCCCAGTCAAGACTATTCGC...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR TCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACGATGCCTCGGTTGGTaGGGATGTAGCGGGCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRRCLGW*GCSGRG Trigger: TCCACGCCCGCTACATCCTCACCAACCGAGGCATCG...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR TCA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGCCATTGGATGGATCTTaGAACCATAGAGCCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWPLDGS*NHRAWV Trigger: TACCCAGGCTCTATGGTTTCAAGATCCATCCAATGG...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR GCA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGCTTTTCCAACATTTGTaGGATGCCTCGGTTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWLFQHL*DASVGE Trigger: CTCACCAACCGAGGCATCGCACAAATGTTGGAAAAG...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR GCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGTGTGAGGGAAACCAGTaGCGAAGTATGCGCCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQCEGNQ*RSMRRP Trigger: CGGACGGCGCATACTTCGGCACTGGTTTCCCTCACA...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | GGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCAATAGGAAGCATTGGCTaGTTCTCACAGTATACACGA | + |
|
Preference number: 4 (lower is better) Translates to: GWQQRNGGVTDRGRGGWAIGSIG*FSQYTR Trigger: TCGTGTATACTGTGAGAACCAGCCAATGCTTCCTAT...TGCCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCCGATAGGAAGCATTaGCTGGTTCTCACAGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWADRKH*LVLTVY Trigger: GTATACTGTGAGAACCAGCCAATGCTTCCTATCGGC...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGTGGGTACAAACTGGTTaGCAGGTCGCTTGGGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQWVQTG*QVAWAG Trigger: ACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCA...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGCCTGGGTACAAACTaGTTGGCAGGTCGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQSLGTN*LAGRLG Trigger: GCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGCT...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR GCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGAACCAGTGCCGAAGTATaGGCCGTCCGTGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRTSAEV*AVRVVV Trigger: CACCACCACACGGACGGCGCATACTTCGGCACTGGT...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCCAAAGTCTCCCTGCTaGTACTTTTCCAACATTTGT | + |
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Preference number: 4 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGPKSPC*YFSNIC Trigger: ACAAATGTTGGAAAAGTACCAGCAGGGAGACTTTGG...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGAGGTTGGCAGGTCGCTTaGGCCGGTACTCTGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRGWQVA*AGTLDA Trigger: TGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACC...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR TCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQTMKSM*GKPVPK Trigger: CTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGT...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGTCGATCAAGTCGCTCTaGTTGGGGTTGTCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQSIKSL*LGLSSS Trigger: GCTGGAAGACAACCCCAACCAGAGCGACTTGATCGA...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGATAGGAAGCATTGGCTaGTTCTCACAGTATACACGA | + |
|
Preference number: 4 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWIGSIG*FSQYTR Trigger: TCGTGTATACTGTGAGAACCAGCCAATGCTTCCTAT...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGATAGGAAGCATTGGCTaGTTCTCACAGTATACACGA | + |
|
Preference number: 4 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGIGSIG*FSQYTR Trigger: TCGTGTATACTGTGAGAACCAGCCAATGCTTCCTAT...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGTAGAGTTTCACCATaGCCTCGCCTGGGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQSRVSP*PRLGCL Trigger: CAGACATCCCAGGCGAGGCCATGGTGAAACTCTACT...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGCTTGGGCCGGTACTCTaGATGCACCATGAAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQLGPVL*MHHEEH Trigger: ATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAG...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGATGGGTACAAACTGGTTaGCAGGTCGCTTGGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRWVQTG*QVAWAG Trigger: ACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCA...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGAAGCCTGGGTACAAACTaGTTGGCAGGTCGCTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRSLGTN*LAGRLG Trigger: GCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGCT...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CCA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGCAGCTGGTAAGCCATTaGATGGATCTTGAAACCATA | + |
|
Preference number: 4 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWQLVSH*MDLETI Trigger: TATGGTTTCAAGATCCATCCAATGGCTTACCAGCTG...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGCAGCTGGTAAGCCATTaGATGGATCTTGAAACCATA | + |
|
Preference number: 4 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGQLVSH*MDLETI Trigger: TATGGTTTCAAGATCCATCCAATGGCTTACCAGCTG...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGTCAAGTCGCTCTGGTTaGGGTTGTCTTCCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQSSRSG*GCLPAL Trigger: AAGAGCTGGAAGACAACCCCAACCAGAGCGACTTGA...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGACACGTCCATGCACTTaGGGCAGTAGAGTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQTRPCT*GSRVSP Trigger: TGGTGAAACTCTACTGCCCCAAGTGCATGGACGTGT...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGGCGAATAGTCTTGACTaGGCTCTTGAAGTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQANSLD*ALEVAG Trigger: GCCAGCAACTTCAAGAGCCCAGTCAAGACTATTCGC...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR TCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGCCATTGGATGGATCTTaGAACCATAGAGCCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQPLDGS*NHRAWV Trigger: TACCCAGGCTCTATGGTTTCAAGATCCATCCAATGG...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR GCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGCTTTTCCAACATTTGTaGGATGCCTCGGTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQLFQHL*DASVGE Trigger: CTCACCAACCGAGGCATCGCACAAATGTTGGAAAAG...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGATCGATCAAGTCGCTCTaGTTGGGGTTGTCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRSIKSL*LGLSSS Trigger: GCTGGAAGACAACCCCAACCAGAGCGACTTGATCGA...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGGCCGATAGGAAGCATTaGCTGGTTCTCACAGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQADRKH*LVLTVY Trigger: GTATACTGTGAGAACCAGCCAATGCTTCCTATCGGC...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGAAGTAGAGTTTCACCATaGCCTCGCCTGGGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRSRVSP*PRLGCL Trigger: CAGACATCCCAGGCGAGGCCATGGTGAAACTCTACT...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGAGCGAATAGTCTTGACTaGGCTCTTGAAGTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRANSLD*ALEVAG Trigger: GCCAGCAACTTCAAGAGCCCAGTCAAGACTATTCGC...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR TCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACCATTGGATGGATCTTaGAACCATAGAGCCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRPLDGS*NHRAWV Trigger: TACCCAGGCTCTATGGTTTCAAGATCCATCCAATGG...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR GCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACTTTTCCAACATTTGTaGGATGCCTCGGTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRLFQHL*DASVGE Trigger: CTCACCAACCGAGGCATCGCACAAATGTTGGAAAAG...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGCCAAAGTCTCCCTGCTaGTACTTTTCCAACATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NHRLPERVAAEEWWCHRQPKSPC*YFSNIC Trigger: ACAAATGTTGGAAAAGTACCAGCAGGGAGACTTTGG...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGCTGGTAAGCCATTaGATGGATCTTGAAACCATA | + |
|
Preference number: 4 (lower is better) Translates to: KNHRLPERVAAEEWWCHRQLVSH*MDLETI Trigger: TATGGTTTCAAGATCCATCCAATGGCTTACCAGCTG...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGTGGTTGGCAGGTCGCTaGGGCCGGTACTCTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGWLAGR*GRYSGC Trigger: GCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCA...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCAACTGGGCTCTTGAAGTaGCTGGCGGCTTGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GWQQRNGGVTDRGRGGWATGLLK*LAAWSC Trigger: GCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGT...TGCCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGTTGGCAGGTCGCTaGGGCCGGTACTCTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGWLAGR*GRYSGC Trigger: GCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCA...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGACTGGGCTCTTGAAGTaGCTGGCGGCTTGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGTGLLK*LAAWSC Trigger: GCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGT...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS TCA 90 bp | GCAGGTCGCTTGGGCCGGTACTCTGGATGCACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAGTATGCGCCGTCCGTGTGGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGRLGRYSGCTMKSM*GKPVPKYAPSVWWC Trigger: ACACCACCACACGGACGGCGCATACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000173633.3 ENSMUST00000174024.8 ENSMUST00000174779.8 |
||
| CDS CCA 90 bp | GCCATCCCAGCCTCCTCACATCGACTCCACAGGACCCCAATCTCCTaGGTACAAACTGGTTGGCAGGTCGCTTGGGCCGGTACTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AIPASSHRLHRTPIS*VQTGWQVAWAGTLD Trigger: ATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGAGATTGGGGTCCTGTGGAGTCGATGTGAGGAGGCTGGGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
||
| CDS-3UTR CAA 90 bp | GGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGCATGGTGTCTGGAGGACTaGGGTGTGTACACGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GWQQRNGGVTDRGRGGWAWCLED*GVYTSM Trigger: CATGGACGTGTACACACCCAAGTCCTCCAGACACCA...TGCCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGGAAGTTGCTGGCGGCTaGGAGCTGCAGCTGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGEVAGG*ELQLVS Trigger: GCTTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTC...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGACTGGGCTCTTGAAGTaGCTGGCGGCTTGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKGWQQRNGGVTDRGRGGTGLLK*LAAWSC Trigger: GCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGT...CCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGGTCTTGACTGGGCTCTaGAAGTTGCTGGCGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGVLTGL*KLLAAW Trigger: CCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGAC...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS TCA 90 bp | CAAACTGGTTGGCAGGTCGCTTGGGCCGGTACTCTGGATGCACCATaGAGAGCATGTGAGGGAAACCAGTGCCGAAGTATGCGCCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: QTGWQVAWAGTLDAP*RACEGNQCRSMRRP Trigger: CGGACGGCGCATACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000173633.3 ENSMUST00000174024.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGTGGTGTCTGGAGGACTaGGGTGTGTACACGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KGGSRGMVVSQTEGEVGGWCLED*GVYTSM Trigger: CATGGACGTGTACACACCCAAGTCCTCCAGACACCA...CCCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS TCA 90 bp | TGCTGGCGGCTTGGAGCTGCAGCTGGTAAGCCATTGGATGGATCTTaGAACCATAGAGCCTGGGTGAAGGAGGTCAGAGAGGCAGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: CWRLGAAAGKPLDGS*NHRAWVKEVREAAR Trigger: CCGTGCTGCCTCTCTGACCTCCTTCACCCAGGCTCTATGGTTTCAAGATCCATCCAATGGCTTACCAGCTGCAGCTCCAAGCCGCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
||
| CDS CCA 90 bp | CAGACAGAGGGAGAGGTGGGTGGGCAATCAGCGAATAGTCTTGACTaGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTEGEVGGQSANSLD*ALEVAGGLELQLVS Trigger: GCTTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACTATTCGCTGATTGCCCACCCACCTCTCCCTCTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173633.3 ENSMUST00000174024.8 |
||
| CDS CCA 90 bp | CTCCTCACATCGACTCCACAGGACCCCAATCTCCTGGGTACAAACTaGTTGGCAGGTCGCTTGGGCCGGTACTCTGGATGCACCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLTSTPQDPNLLGTN*LAGRLGRYSGCTMK Trigger: CTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGAGATTGGGGTCCTGTGGAGTCGATGTGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
||
| CDS CCA 90 bp | GAGCCTGGGTACAAACTGGTTGGCAGGTCGCTTGGGCCGGTACTCTaGATGCACCATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: EPGYKLVGRSLGPVL*MHHEEHVRETSAEV Trigger: TACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGAGGGAGAGGTGGGTGGGATCATGTCCAGAGCTaGTCGATAGTGAGGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGWQQRNGGVTDRGRGGWDHVQS*SIVRHL Trigger: CAGGTGCCTCACTATCGACAAGCTCTGGACATGATC...CCACCCACCTCTCCCTCTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 |
||
| CDS TCA 90 bp | GGAAATCCAGGACACCTCCTCAGAGCTACTCATCTTTATGTCCGCTaGGGTGGGGCCAGCCATTCTGCCGCCGCTTGTCCCTTTGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: GNPGHLLRATHLYVR*GGASHSAAACPFVL Trigger: AAGTACAAAGGGACAAGCGGCGGCAGAATGGCTGGCCCCACCTCAGCGGACATAAAGATGAGTAGCTCTGAGGAGGTGTCCTGGATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172765.9 |
||
| CDS GCA 90 bp | GGTGAGGATGTAGCGGGCGTGGATCAACCCATAAAGCATCTCAGCTaGCTGTTCGATCAAGTCGCTCTGGTTGGGGTTGTCTTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GEDVAGVDQPIKHLS*LFDQVALVGVVFQL Trigger: GAGCTGGAAGACAACCCCAACCAGAGCGACTTGATCGAACAGGCAGCTGAGATGCTTTATGGGTTGATCCACGCCCGCTACATCCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174306.8 ENSMUST00000174779.8 |
||
| CDS CCA 90 bp | TCTCCTGGGTACAAACTGGTTGGCAGGTCGCTTGGGCCGGTACTCTaGATGCACCATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SPGYKLVGRSLGPVL*MHHEEHVRETSAEV Trigger: TACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
||
| CDS-3UTR CAA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGGAAGTTGCTGGCGGCTaGGAGCTGCAGCTGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NHRLPERVAAEEWWCHRQEVAGG*ELQLVS Trigger: GCTTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTC...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGGTCTTGACTGGGCTCTaGAAGTTGCTGGCGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NHRLPERVAAEEWWCHRQVLTGL*KLLAAW Trigger: CCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGAC...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS TCA 90 bp | CTCCCTGCTGGTACTTTTCCAACATTTGTGCGATGCCTCGGTTGGTaGGGATGTAGCGGGCGTGGATCAACCCATAAAGCATCTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPAGTFPTFVRCLGW*GCSGRGSTHKASQL Trigger: CAGCTGAGATGCTTTATGGGTTGATCCACGCCCGCTACATCCTCACCAACCGAGGCATCGCACAAATGTTGGAAAAGTACCAGCAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174306.8 ENSMUST00000174779.8 |
||
| CDS CCA 90 bp | GCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAGCTGGTAAGCCATTaGATGGATCTTGAAACCATAGAGCCTGGGTACAAACTGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALEVAGGLELQLVSH*MDLETIEPGYKLVG Trigger: GCCAACCAGTTTGTACCCAGGCTCTATGGTTTCAAGATCCATCCAATGGCTTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGAGAAGTTGCTGGCGGCTaGGAGCTGCAGCTGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KNHRLPERVAAEEWWCHREVAGG*ELQLVS Trigger: GCTTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTC...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
||
| CDS-3UTR CAA 90 bp | AACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGACAGGATCATGTCCAGAGCTaGTCGATAGTGAGGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: NHRLPERVAAEEWWCHRQDHVQS*SIVRHL Trigger: CAGGTGCCTCACTATCGACAAGCTCTGGACATGATC...CTGTCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 |
||
| CDS-3UTR CAA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGAGTCTTGACTGGGCTCTaGAAGTTGCTGGCGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KNHRLPERVAAEEWWCHRVLTGL*KLLAAW Trigger: CCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGAC...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS-3UTR CAA 90 bp | AAAAACCATAGACTTCCTGAAAGGGTGGCAGCAGAGGAATGGTGGTGTCACAGATGGTGTCTGGAGGACTaGGGTGTGTACACGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: KNHRLPERVAAEEWWCHRWCLED*GVYTSM Trigger: CATGGACGTGTACACACCCAAGTCCTCCAGACACCA...TCTGTGACACCACCATTCCTCTGCTGCCACCCTTTCAGGAAGTCTATGGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174779.8 |
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| CDS CCA 90 bp | ACCCATAAAGCATCTCAGCTGCCTGTTCGATCAAGTCGCTCTGGTTaGGGTTGTCTTCCAGCTCTTCATCAGGTTCCAGGTCTAAGATCA | + |
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Preference number: 5 (lower is better) Translates to: THKASQLPVRSSRSG*GCLPALHQVPGLRS Trigger: TGATCTTAGACCTGGAACCTGATGAAGAGCTGGAAGACAACCCCAACCAGAGCGACTTGATCGAACAGGCAGCTGAGATGCTTTATGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174306.8 ENSMUST00000174779.8 |
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| CDS TCA 72 bp | GGACACCTCCTCAGAGCTACTCATCTTTATGTCCGCTaGGGTGGGGCCAGCCATTCTGCCGCCGCTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: GHLLRATHLYVR*GGASHSAAACP Trigger: GGGACAAGCGGCGGCAGAATGGCTGGCCCCACCTCAGCGGACATAAAGATGAGTAGCTCTGAGGAGGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172765.9 |
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| CDS CCA 72 bp | GCCTCCTCACATCGACTCCACAGGACCCCAATCTCCTaGGTACAAACTGGTTGGCAGGTCGCTTGGGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: ASSHRLHRTPIS*VQTGWQVAWAG Trigger: ACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGAGATTGGGGTCCTGTGGAGTCGATGTGAGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
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| CDS CCA 72 bp | CTCCACAGGACCCCAATCTCCTGGGTACAAACTGGTTaGCAGGTCGCTTGGGCCGGTACTCTGGATGCACCA | + |
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Preference number: 6 (lower is better) Translates to: LHRTPISWVQTG*QVAWAGTLDAP Trigger: TGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGAGATTGGGGTCCTGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
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| CDS CCA 72 bp | TCGACTCCACAGGACCCCAATCTCCTGGGTACAAACTaGTTGGCAGGTCGCTTGGGCCGGTACTCTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: STPQDPNLLGTN*LAGRLGRYSGC Trigger: GCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGAGATTGGGGTCCTGTGGAGTCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
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| CDS CAA 90 bp | CTCACATCGACTCCACAGGACCCCAATCTCCTGGGTACAAACTGGTaGGCAGGTCGCTTGGGCCGGTACTCTGGATGCACCATGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LTSTPQDPNLLGTNW*AGRLGRYSGCTMKS Trigger: GCTCTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGAGATTGGGGTCCTGTGGAGTCGATGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
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| CDS TCA 72 bp | TTGGGCCGGTACTCTGGATGCACCATGAAGAGCATGTaGGGGAAACCAGTGCCGAAGTATGCGCCGTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: LGRYSGCTMKSM*GKPVPKYAPSV Trigger: CACGGACGGCGCATACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000173633.3 ENSMUST00000174024.8 ENSMUST00000174779.8 |
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| CDS GCA 72 bp | CATGAAGAGCATGTGAGGGAAACCAGTGCCGAAGTATaGGCCGTCCGTGTGGTGGTGTCTGGAGGACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HEEHVRETSAEV*AVRVVVSGGLG Trigger: CCCAAGTCCTCCAGACACCACCACACGGACGGCGCATACTTCGGCACTGGTTTCCCTCACATGCTCTTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000173633.3 ENSMUST00000174024.8 ENSMUST00000174779.8 |
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| CDS CCA 72 bp | GTCTGGAGGACTTGGGTGTGTACACGTCCATGCACTTaGGGCAGTAGAGTTTCACCATGGCCTCGCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: VWRTWVCTRPCT*GSRVSPWPRLG Trigger: TCCCAGGCGAGGCCATGGTGAAACTCTACTGCCCCAAGTGCATGGACGTGTACACACCCAAGTCCTCCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000173633.3 ENSMUST00000174024.8 ENSMUST00000174779.8 |
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| CDS CCA 72 bp | GGAGAGGTGGGTGGGCAATCAGCGAATAGTCTTGACTaGGCTCTTGAAGTTGCTGGCGGCTTGGAGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GEVGGQSANSLD*ALEVAGGLELQ Trigger: CTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACTATTCGCTGATTGCCCACCCACCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173633.3 ENSMUST00000174024.8 |
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| CDS CAA 72 bp | CAGAGGGAGAGGTGGGTGGGCAATCAGCGAATAGTCTaGACTGGGCTCTTGAAGTTGCTGGCGGCTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: QRERWVGNQRIV*TGLLKLLAAWS Trigger: GCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACTATTCGCTGATTGCCCACCCACCTCTCCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173633.3 ENSMUST00000174024.8 |
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| CDS TCA 72 bp | TGGCAGGTCGCTTGGGCCGGTACTCTGGATGCACCATaGAGAGCATGTGAGGGAAACCAGTGCCGAAGTATG | + |
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Preference number: 6 (lower is better) Translates to: WQVAWAGTLDAP*RACEGNQCRSM Trigger: CATACTTCGGCACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000173633.3 ENSMUST00000174024.8 ENSMUST00000174779.8 |
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| CDS CAA 72 bp | CCCAATCTCCTGGGTACAAACTGGTTGGCAGGTCGCTaGGGCCGGTACTCTGGATGCACCATGAAGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: PNLLGTNWLAGR*GRYSGCTMKSM Trigger: CATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTACCCAGGAGATTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
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| CDS GCA 72 bp | GTAGCGGGCGTGGATCAACCCATAAAGCATCTCAGCTaGCTGTTCGATCAAGTCGCTCTGGTTGGGGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VAGVDQPIKHLS*LFDQVALVGVV Trigger: GACAACCCCAACCAGAGCGACTTGATCGAACAGGCAGCTGAGATGCTTTATGGGTTGATCCACGCCCGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174306.8 ENSMUST00000174779.8 |
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| CDS CCA 72 bp | GCATCTCAGCTGCCTGTTCGATCAAGTCGCTCTGGTTaGGGTTGTCTTCCAGCTCTTCATCAGGTTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ASQLPVRSSRSG*GCLPALHQVPG Trigger: ACCTGGAACCTGATGAAGAGCTGGAAGACAACCCCAACCAGAGCGACTTGATCGAACAGGCAGCTGAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174306.8 ENSMUST00000174779.8 |
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| CDS CCA 72 bp | TACAAACTGGTTGGCAGGTCGCTTGGGCCGGTACTCTaGATGCACCATGAAGAGCATGTGAGGGAAACCAGT | + |
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Preference number: 6 (lower is better) Translates to: YKLVGRSLGPVL*MHHEEHVRETS Trigger: ACTGGTTTCCCTCACATGCTCTTCATGGTGCATCCAGAGTACCGGCCCAAGCGACCTGCCAACCAGTTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000173633.3 ENSMUST00000174024.8 ENSMUST00000174779.8 |
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| CDS CCA 72 bp | GCCAGACTGCAGACCAGGTATCCCGATAGGAAGCATTaGCTGGTTCTCACAGTATACACGAGGACAGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: ARLQTRYPDRKH*LVLTVYTRTVA Trigger: GGCTACTGTCCTCGTGTATACTGTGAGAACCAGCCAATGCTTCCTATCGGGATACCTGGTCTGCAGTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174024.8 |
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| CDS TCA 72 bp | CTTGGAGCTGCAGCTGGTAAGCCATTGGATGGATCTTaGAACCATAGAGCCTGGGTGAAGGAGGTCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LGAAAGKPLDGS*NHRAWVKEVRE Trigger: CTCTCTGACCTCCTTCACCCAGGCTCTATGGTTTCAAGATCCATCCAATGGCTTACCAGCTGCAGCTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173633.3 |
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| CDS CCA 72 bp | GTTGCTGGCGGCTTGGAGCTGCAGCTGGTAAGCCATTaGATGGATCTTGAAACCATAGAGCCTGGGTACAAA | + |
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Preference number: 6 (lower is better) Translates to: VAGGLELQLVSH*MDLETIEPGYK Trigger: TTTGTACCCAGGCTCTATGGTTTCAAGATCCATCCAATGGCTTACCAGCTGCAGCTCCAAGCCGCCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174779.8 |
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| CDS TCA 72 bp | GGTACTTTTCCAACATTTGTGCGATGCCTCGGTTGGTaGGGATGTAGCGGGCGTGGATCAACCCATAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GTFPTFVRCLGW*GCSGRGSTHKA Trigger: TGCTTTATGGGTTGATCCACGCCCGCTACATCCTCACCAACCGAGGCATCGCACAAATGTTGGAAAAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025246.13 ENSMUST00000172765.9 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174306.8 ENSMUST00000174779.8 |
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| CDS TCA 72 bp | CTTGGAGCTGCAGCTGGTAAGCCATTGGATGGATCTTaGAACCATAGAGCCTGGGTACAAACTGGTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LGAAAGKPLDGS*NHRAWVQTGWQ Trigger: CTGCCAACCAGTTTGTACCCAGGCTCTATGGTTTCAAGATCCATCCAATGGCTTACCAGCTGCAGCTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000174024.8 ENSMUST00000174779.8 |
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| CDS CAA 72 bp | AATAGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTaGGAGCTGCAGCTGGTAAGCCATTGGATGGATCTT | + |
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Preference number: 6 (lower is better) Translates to: NSLDWALEVAGG*ELQLVSHWMDL Trigger: AAGATCCATCCAATGGCTTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025246.13 ENSMUST00000173114.8 ENSMUST00000173633.3 ENSMUST00000174024.8 ENSMUST00000174779.8 |
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| CDS CAA 90 bp | CAATCAGCGAATAGTCTTGACTGGGCTCTTGAAGTTGCTGGCGGCTaGGAGCTGCAGCTGGTAAGCCATTGGATGGATCTTGAAACCATA | + |
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Preference number: 6 (lower is better) Translates to: QSANSLDWALEVAGG*ELQLVSHWMDLETI Trigger: TATGGTTTCAAGATCCATCCAATGGCTTACCAGCTGCAGCTCCAAGCCGCCAGCAACTTCAAGAGCCCAGTCAAGACTATTCGCTGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173633.3 ENSMUST00000174024.8 |
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