Pregenerated sensors for CSNK1G2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003345Ensembl transcript IDs: ENSMUST00000079773.14, ENSMUST00000085435.7, ENSMUST00000220163.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACGGCCGCCCTGGTACTGTGGGGCCCATACCAGTCCCTATGCGGTaGCCGTCCCGCGCTCCGCCCCGGCTTTGGTGCAGCATTGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: HGRPGTVGPIPVPMR*PSRAPPRLWCSIVE Trigger: TTCCACAATGCTGCACCAAAGCCGGGGCGGAGCGCGGGACGGTCACCGCATAGGGACTGGTATGGGCCCCACAGTACCAGGGCGGCCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| 3UTR TCA 90 bp | GGGATGATGAGACACGGGTGTAGAGATTTCCGCCAAAGTCCTGTGTaGAGGAAGGGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: GMMRHGCRDFRQSPV*RKGPQVPKDGACRW Trigger: CCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCCCTTCCTTCACACAGGACTTTGGCGGAAATCTCTACACCCGTGTCTCATCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| 3UTR GCA 90 bp | GACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTTGAGCGGCTaGACCCACCCTCACTTATGTCGCTGCAGCGATTTTCTCTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: DTASFLDTRLGILSG*THPHLCRCSDFLFL Trigger: GAGAAAGAGAAAATCGCTGCAGCGACATAAGTGAGGGTGGGTGCAGCCGCTCAAGATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACTCAGTTCCCACGACCAAGGCCTGGCCCTCCTGTGGGACCGCCTCTCTGCGCGCCTCCCCTTTGGTaGCTGAGGCCTCCCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: RTQFPRPRPGPPVGPPLCAPPLW*LRPPHV Trigger: CACATGGGGAGGCCTCAGCCACCAAAGGGGAGGCGC...GCAGAGAGGCGGTCCCACAGGAGGGCCAGGCCTTGGTCGTGGGAACTGAGTTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| 3UTR CAA 90 bp | ACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTaGAGCGGCTGCACCCACCCTCACTTATGTCGCTGCAGCGATTTT | + |
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Preference number: 2 (lower is better) Translates to: TTKDTASFLDTRLGI*SGCTHPHLCRCSDF Trigger: AAAATCGCTGCAGCGACATAAGTGAGGGTGGGTGCAGCCGCTCAAGATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTTGCACTTTGTTTCATCTaGCACCTCTACTTCTGCGGG | + |
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Preference number: 2 (lower is better) Translates to: APHHQGHCQFPRHPPGDLALCFI*HLYFCG Trigger: CCCGCAGAAGTAGAGGTGGCAGATGAAACAAAGTGC...AAGATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
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| 3UTR CAA 90 bp | ACCCACCCTCACTTATGTCGCTGCAGCGATTTTCTCTTTCTCCTCTaGAAGAAGCAGCAGCACTTTGTTTCATCTGCCACCTCTACTTCT | + |
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Preference number: 2 (lower is better) Translates to: THPHLCRCSDFLFLL*KKQQHFVSSATSTS Trigger: AGAAGTAGAGGTGGCAGATGAAACAAAGTGCTGCTGCTTCTTCAAGAGGAGAAAGAGAAAATCGCTGCAGCGACATAAGTGAGGGTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTACGGCTTCAAGGAAGCGCCAGAGAAACATAAGTTCATTTCTGTACACGTCCGAGAAAATGGCCTTTaGATTGAGGGGACAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LYGFKEAPEKHKFISVHVRENGL*IEGTSW Trigger: CCAGCTTGTCCCCTCAATCCAAAGGCCATTTTCTCG...GACGTGTACAGAAATGAACTTATGTTTCTCTGGCGCTTCCTTGAAGCCGTAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| 3UTR CCA 72 bp | GGGCCCTGCACGCAGGGACACGGATCACGGCCGCCCTaGTACTGTGGGGCCCATACCAGTCCCTATGCGGTG | + |
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Preference number: 3 (lower is better) Translates to: GPCTQGHGSRPP*YCGAHTSPYAV Trigger: CACCGCATAGGGACTGGTATGGGCCCCACAGTACCAGGGCGGCCGTGATCCGTGTCCCTGCGTGCAGGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| 3UTR CCA 72 bp | GAACTCAGTTCCCACGACCAAGGCCTGGCCCTCCTGTaGGACCGCCTCTCTGCTGCCCCAGGCCTGGCGTTA | + |
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Preference number: 3 (lower is better) Translates to: ELSSHDQGLALL*DRLSAAPGLAL Trigger: TAACGCCAGGCCTGGGGCAGCAGAGAGGCGGTCCCACAGGAGGGCCAGGCCTTGGTCGTGGGAACTGAGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| 3UTR GCA 72 bp | CAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACTaGCAGTTTCCTAGACACCCGCCTGGGGATCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: QVGQGAPHHQGH*QFPRHPPGDLE Trigger: CTCAAGATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| 3UTR CCA 72 bp | TCCTGTGTGAAGGAAGGGACCCCAAGTCCCGAAAGATaGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCAC | + |
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Preference number: 3 (lower is better) Translates to: SCVKEGTPSPER*CLQVGQGAPHH Trigger: GTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCCCTTCCTTCACACAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| 3UTR GCA 72 bp | TGTGTGAAGGAAGGGACCCCAAGTCCCGAAAGATGGTaGCTGCAGGTGGGCCAAGGAGCCCCACACCACCAA | + |
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Preference number: 3 (lower is better) Translates to: CVKEGTPSPERW*LQVGQGAPHHQ Trigger: TTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCCCTTCCTTCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| 3UTR GCA 72 bp | TCTCCTCTTGAAGAAGCAGCAGCACTTTGTTTCATCTaGCACCTCTACTTCTGCGGGGGCCGCGATGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: SPLEEAAALCFI*HLYFCGGRDGG Trigger: GCCCCCATCGCGGCCCCCGCAGAAGTAGAGGTGGCAGATGAAACAAAGTGCTGCTGCTTCTTCAAGAGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
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| 3UTR GCA 72 bp | AGTTTCCTAGACACCCGCCTGGGGATCTTGAGCGGCTaGACCCACCCTCACTTATGTCGCTGCAGCGATTTT | + |
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Preference number: 3 (lower is better) Translates to: SFLDTRLGILSG*THPHLCRCSDF Trigger: AAAATCGCTGCAGCGACATAAGTGAGGGTGGGTGCAGCCGCTCAAGATCCCCAGGCGGGTGTCTAGGAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
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| 3UTR TCA 72 bp | AGACACGGGTGTAGAGATTTCCGCCAAAGTCCTGTGTaGAGGAAGGGACCCCAAGTCCCGAAAGATGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: RHGCRDFRQSPV*RKGPQVPKDGA Trigger: GGCACCATCTTTCGGGACTTGGGGTCCCTTCCTTCACACAGGACTTTGGCGGAAATCTCTACACCCGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | CTGGTACTGTGGGGCCCATACCAGTCCCTATGCGGTGACCGTCCCGCGCTCCGCGGTGGACGGTGCCGATaGGTGTCGGCAGGGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LVLWGPYQSLCGDRPALRGGRCR*VSAGAC Trigger: GCAAGCCCCTGCCGACACCCATCGGCACCGTCCACC...GCGGAGCGCGGGACGGTCACCGCATAGGGACTGGTATGGGCCCCACAGTACCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| 3UTR CAA 72 bp | CCCTATGCGGTGACCGTCCCGCGCTCCGCCCCGGCTTaGGTGCAGCATTGTGGAAGTGCACGCGCCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PYAVTVPRSAPA*VQHCGSARASP Trigger: AGGGGAGGCGCGTGCACTTCCACAATGCTGCACCAAAGCCGGGGCGGAGCGCGGGACGGTCACCGCATAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR GCA 90 bp | CTGGTACTGTGGGGCCCATACCAGTCCCTATGCGGTGACCGTCCCGCGCTCCGCAAGCGGTACTCCAGGTaGAGCTGTGGGGCCCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LVLWGPYQSLCGDRPALRKRYSR*SCGARD Trigger: GTCCCGGGCCCCACAGCTGCACCTGGAGTACCGCTT...GCGGAGCGCGGGACGGTCACCGCATAGGGACTGGTATGGGCCCCACAGTACCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR CCA 90 bp | TGTGGGGCCCATACCAGTCCCTATGCGGTGACCGTCCCGCGCTCCGCCCCGGCTAGCTTTGTCGCGATGTaGTGGCTGGGAGGGCACGTC | + |
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Preference number: 4 (lower is better) Translates to: CGAHTSPYAVTVPRSAPASFVAM*WLGGHV Trigger: GACGTGCCCTCCCAGCCACCACATCGCGACAAAGCT...AGCCGGGGCGGAGCGCGGGACGGTCACCGCATAGGGACTGGTATGGGCCCCACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR GCA 90 bp | GGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCAAGCGGTACTCCAGGTaGAGCTGTGGGGCCCGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GPQVPKDGACRWAKEPHTKRYSR*SCGARD Trigger: GTCCCGGGCCCCACAGCTGCACCTGGAGTACCGCTT...GGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR GCA 90 bp | AGAACTCAGTTCCCACGACCAAGGCCTGGCCCTCCTGTGGGACCGCCTCTCTGCTGGAGTGCTGCCGCTTaGTGCCCGGCCGCCCAACCA | + |
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Preference number: 4 (lower is better) Translates to: RTQFPRPRPGPPVGPPLCWSAAA*CPAAQP Trigger: TGGTTGGGCGGCCGGGCAGCAAGCGGCAGCACTCCA...GCAGAGAGGCGGTCCCACAGGAGGGCCAGGCCTTGGTCGTGGGAACTGAGTTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR TCA 90 bp | GGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCGCACCGTCTTCAGCGTaGAGGTGCGGTCGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: GPQVPKDGACRWAKEPHTAPSSA*RCGRTG Trigger: ACCTGTGCGACCGCACCTTCACGCTGAAGACGGTGC...GGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR GCA 90 bp | GTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACAGCTGGTCCCCGAACTaGGGACGCCGTGGTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VPKDGACRWAKEPHTTKDSWSPN*GRRGCS Trigger: GGAGCAACCACGGCGTCCGCAGTTCGGGGACCAGCT...GTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | GGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCGCCGACTCGGAAGTTTaGGCCCACCATCAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: GPQVPKDGACRWAKEPHTADSEV*AHHQDP Trigger: GGGGTCCTGATGGTGGGCCCAAACTTCCGAGTCGGC...GGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | AAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACTGCCGGTGGACGGTGCCGATaGGTGTCGGCAGGGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KDGACRWAKEPHTTKDTAGGRCR*VSAGAC Trigger: GCAAGCCCCTGCCGACACCCATCGGCACCGTCCACC...GGCAGTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | GTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACGAGGGCACGTCAGGGTaGACGGTGCCGATGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VPKDGACRWAKEPHTTKDEGTSG*TVPMGV Trigger: GACACCCATCGGCACCGTCCACCCTGACGTGCCCTC...GTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | CCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACTATGGGGGCGTTGGAGTaGCCCGCGGTGGGGTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: PKDGACRWAKEPHTTKDTMGALE*PAVGSS Trigger: AGACGACCCCACCGCGGGCCACTCCAACGCCCCCAT...AGTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR TCA 90 bp | CCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACTCACCATCAGGACCCCTaGGCTGGTCCCCGAACTGCG | + |
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Preference number: 4 (lower is better) Translates to: PKDGACRWAKEPHTTKDTHHQDP*AGPRTA Trigger: CGCAGTTCGGGGACCAGCTCAGGGGTCCTGATGGTG...AGTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR GCA 90 bp | CGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACTGAGCTGGTCCCCGAACTaGGGACGCCGTGGTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RKMVPAGGPRSPTPPRTLSWSPN*GRRGCS Trigger: GGAGCAACCACGGCGTCCGCAGTTCGGGGACCAGCT...CAGTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | GTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACGCCGACTCGGAAGTTTaGGCCCACCATCAGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: VPKDGACRWAKEPHTTKDADSEV*AHHQDP Trigger: GGGGTCCTGATGGTGGGCCCAAACTTCCGAGTCGGC...GTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | AGCAAGAACTCAGTTCCCACGACCAAGGCCTGGCCCTCCTGTGGGACCGCCTCTGAGGGCACGTCAGGGTaGACGGTGCCGATGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SKNSVPTTKAWPSCGTASEGTSG*TVPMGV Trigger: GACACCCATCGGCACCGTCCACCCTGACGTGCCCTC...AGAGGCGGTCCCACAGGAGGGCCAGGCCTTGGTCGTGGGAACTGAGTTCTTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR CCA 90 bp | CGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACTGTCGCGATGTGGTGGCTaGGAGGGCACGTCAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RKMVPAGGPRSPTPPRTLSRCGG*EGTSGW Trigger: CCACCCTGACGTGCCCTCCCAGCCACCACATCGCGA...CAGTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | GGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCAGCTTTGTCGCGATGTaGTGGCTGGGAGGGCACGTC | + |
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Preference number: 4 (lower is better) Translates to: GPQVPKDGACRWAKEPHTSFVAM*WLGGHV Trigger: GACGTGCCCTCCCAGCCACCACATCGCGACAAAGCT...GGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR TCA 90 bp | GCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTTCACCATCAGGACCCCTaGGCTGGTCCCCGAACTGCG | + |
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Preference number: 4 (lower is better) Translates to: APHHQGHCQFPRHPPGDLHHQDP*AGPRTA Trigger: CGCAGTTCGGGGACCAGCTCAGGGGTCCTGATGGTG...AAGATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR TCA 90 bp | TCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACAGCACCGTCTTCAGCGTaGAGGTGCGGTCGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: SRKMVPAGGPRSPTPPRTAPSSA*RCGRTG Trigger: ACCTGTGCGACCGCACCTTCACGCTGAAGACGGTGC...TGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR TCA 90 bp | CTGGTACTGTGGGGCCCATACCAGTCCCTATGCGGTGACCGTCCCGCGCTCCGCCCTCACCTGTCGTGCTaGGCTGCTTGTAAAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LVLWGPYQSLCGDRPALRPHLSC*AACKSG Trigger: ACCGCTTTTACAAGCAGCTCAGCACGACAGGTGAGG...GCGGAGCGCGGGACGGTCACCGCATAGGGACTGGTATGGGCCCCACAGTACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR GCA 90 bp | GGAGCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTCCTTCAGCGTGTCTaGCTTGAGCCCCTGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GAPHHQGHCQFPRHPPGDLLQRV*LEPLPG Trigger: CCCTGGCAGGGGCTCAAGGCAGACACGCTGAAGGAG...ATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | GTGACCGTCCCGCGCTCCGCCCCGGCTTTGGTGCAGCATTGTGGAAGTGCACGCACACAGCACCTCGATTaGTGTGGCACGCTTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VTVPRSAPALVQHCGSARTQHLD*CGTLGV Trigger: GACACCAAGCGTGCCACACCAATCGAGGTGCTGTGT...GCGTGCACTTCCACAATGCTGCACCAAAGCCGGGGCGGAGCGCGGGACGGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR GCA 90 bp | GCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTTCTCCTTCAGCGTGTCTaGCTTGAGCCCCTGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: APHHQGHCQFPRHPPGDLLLQRV*LEPLPG Trigger: CCCTGGCAGGGGCTCAAGGCAGACACGCTGAAGGAG...AAGATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | GGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCCATAGCGCAAATAGGTaGCCATCTCCTCCGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GPQVPKDGACRWAKEPHTHSANR*PSPPGS Trigger: GCTTCCCGGAGGAGATGGCCACCTATTTGCGCTATG...GGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| 3UTR CAA 72 bp | TTGGTGCAGCATTGTGGAAGTGCACGCGCCTCCCCTTaGGTGGCTGAGGCCTCCCCATGTGACACCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: LVQHCGSARASP*VAEASPCDTHA Trigger: GGCATGGGTGTCACATGGGGAGGCCTCAGCCACCAAAGGGGAGGCGCGTGCACTTCCACAATGCTGCACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR TCA 90 bp | GGAGCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCGTACTCCATGCGCGTaGTCAGCTGGATGGCGATCA | + |
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Preference number: 4 (lower is better) Translates to: GAPHHQGHCQFPRHPPGDRTPCA*SAGWRS Trigger: TGATCGCCATCCAGCTGATCACGCGCATGGAGTACG...ATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR GCA 90 bp | GACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCTGTCAGGCTCTTGTaGTCGCGATATGGGATGTGC | + |
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Preference number: 4 (lower is better) Translates to: DPKSRKMVPAGGPRSPTPPVRLL*SRYGMC Trigger: GCACATCCCATATCGCGAGCACAAGAGCCTGACAGG...TGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | AGGGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACAGACTCGTGCCGGTTTTaGACATTCTCCTGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RDPKSRKMVPAGGPRSPTDSCRF*TFSCPP Trigger: AGGAGGGCAGGAGAATGTCCAAAACCGGCACGAGTC...TGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | AGGGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACAGCACCTCGATTGGTGTaGCACGCTTGGTGTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RDPKSRKMVPAGGPRSPTAPRLV*HAWCLQ Trigger: TTGGAGACACCAAGCGTGCCACACCAATCGAGGTGC...TGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS-3UTR CCA 90 bp | GTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACACAGCACCTCGATTaGTGTGGCACGCTTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPKDGACRWAKEPHTTKDTQHLD*CGTLGV Trigger: GACACCAAGCGTGCCACACCAATCGAGGTGCTGTGT...GTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR GCA 90 bp | GGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCGCACTTTGTTTCATCTaGCACCTCTACTTCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPQVPKDGACRWAKEPHTALCFI*HLYFCG Trigger: CCCGCAGAAGTAGAGGTGGCAGATGAAACAAAGTGC...GGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | AGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGAGACTCGTGCCGGTTTTaGACATTCTCCTGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPERWCLQVGQGAPHHQGDSCRF*TFSCPP Trigger: AGGAGGGCAGGAGAATGTCCAAAACCGGCACGAGTC...TCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | AAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACTGCCATGCGCGTGATCAGCTaGATGGCGATCATCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KDGACRWAKEPHTTKDTAMRVIS*MAIIST Trigger: GGTGCTGATGATCGCCATCCAGCTGATCACGCGCAT...GGCAGTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | AGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGAGCACCTCGATTGGTGTaGCACGCTTGGTGTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPERWCLQVGQGAPHHQGAPRLV*HAWCLQ Trigger: TTGGAGACACCAAGCGTGCCACACCAATCGAGGTGC...TCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | GAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACTGCCATAGCGCAAATAGGTaGCCATCTCCTCCGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERWCLQVGQGAPHHQGHCHSANR*PSPPGS Trigger: GCTTCCCGGAGGAGATGGCCACCTATTTGCGCTATG...GCAGTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CCA 90 bp | GATCTTGAGCGGCTGCACCCACCCTCACTTATGTCGCTGCAGCGATTTTCTCTTGGTGGACGGTGCCGATaGGTGTCGGCTGCGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DLERLHPPSLMSLQRFSLGGRCR*VSAARA Trigger: CGCTCTCGCAGCCGACACCCATCGGCACCGTCCACC...AAGAGAAAATCGCTGCAGCGACATAAGTGAGGGTGGGTGCAGCCGCTCAAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTTCCTGTCAGGCTCTTGTaGTCGCGATATGGGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: APHHQGHCQFPRHPPGDLPVRLL*SRYGMC Trigger: GCACATCCCATATCGCGAGCACAAGAGCCTGACAGG...AAGATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS-3UTR CCA 90 bp | CCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACCTTGTGCTCGCGATATaGGATGTGCTTCTTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PERWCLQVGQGAPHHQGHLVLAI*DVLLSL Trigger: GAGACTAAGAAGCACATCCCATATCGCGAGCACAAG...GTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS-3UTR GCA 90 bp | AAAGCAAGAACTCAGTTCCCACGACCAAGGCCTGGCCCTCCTGTGGGACCGCCTGCACTTTGTTTCATCTaGCACCTCTACTTCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KARTQFPRPRPGPPVGPPALCFI*HLYFCG Trigger: CCCGCAGAAGTAGAGGTGGCAGATGAAACAAAGTGC...AGGCGGTCCCACAGGAGGGCCAGGCCTTGGTCGTGGGAACTGAGTTCTTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
||
| CDS-3UTR CCA 90 bp | GAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACACTGCCTTGTGCTCGCGATATaGGATGTGCTTCTTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERWCLQVGQGAPHHQGHCLVLAI*DVLLSL Trigger: GAGACTAAGAAGCACATCCCATATCGCGAGCACAAG...GCAGTGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS-3UTR CCA 90 bp | GATCTTGAGCGGCTGCACCCACCCTCACTTATGTCGCTGCAGCGATTTTCTCTTGATGTCAGGACAGGATaGAGCCGCAGGTGTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLERLHPPSLMSLQRFSLDVRTG*SRRCRR Trigger: CCTGCGACACCTGCGGCTCCATCCTGTCCTGACATC...AAGAGAAAATCGCTGCAGCGACATAAGTGAGGGTGGGTGCAGCCGCTCAAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
||
| CDS-3UTR CCA 90 bp | TCTACGGCTTCAAGGAAGCGCCAGAGAAACATAAGTTCATTTCTGTACACGTCGATGGGGGCGTTGGAGTaGCCCGCGGTGGGGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: STASRKRQRNISSFLYTSMGALE*PAVGSS Trigger: AGACGACCCCACCGCGGGCCACTCCAACGCCCCCAT...CGACGTGTACAGAAATGAACTTATGTTTCTCTGGCGCTTCCTTGAAGCCGTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
||
| CDS-3UTR CCA 90 bp | CTCTACGGCTTCAAGGAAGCGCCAGAGAAACATAAGTTCATTTCTGTACACGTCTCGCGATGTGGTGGCTaGGAGGGCACGTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYGFKEAPEKHKFISVHVSRCGG*EGTSGW Trigger: CCACCCTGACGTGCCCTCCCAGCCACCACATCGCGA...GACGTGTACAGAAATGAACTTATGTTTCTCTGGCGCTTCCTTGAAGCCGTAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR CAA 90 bp | CGGCCGCCCTGGTACTGTGGGGCCCATACCAGTCCCTATGCGGTGACCGTCCCGGGTGTCGGCAGGGGCTaGCCGGCCCAGTCATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPPWYCGAHTSPYAVTVPGVGRG*PAQSYS Trigger: CGAGTATGACTGGGCCGGCAAGCCCCTGCCGACACC...CGGGACGGTCACCGCATAGGGACTGGTATGGGCCCCACAGTACCAGGGCGGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
||
| CDS CCA 90 bp | CGGTGCCGATGGGTGTCGGCTGCGAGAGCGGATGTCAGGACAGGATaGAGCCGCAGGTGTCGCAGGGGCTTGCCGGCCCAGTCATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: RCRWVSAARADVRTG*SRRCRRGLPAQSYS Trigger: CGAGTATGACTGGGCCGGCAAGCCCCTGCGACACCTGCGGCTCCATCCTGTCCTGACATCCGCTCTCGCAGCCGACACCCATCGGCACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
||
| CDS-3UTR CAA 90 bp | CCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAATGGAGTGCTGCCGCTaGCTGCCCGGCCGCCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: PKSRKMVPAGGPRSPTPPMECCR*LPGRPT Trigger: GGTTGGGCGGCCGGGCAGCAAGCGGCAGCACTCCAT...TGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS CCA 90 bp | TCTTGCCGACTCGGAAGTTTGGGCCCACCATCAGGACCCCTGAGCTaGTCCCCGAACTGCGGACGCCGTGGTTGCTCCGACTCGTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SCRLGSLGPPSGPLS*SPNCGRRGCSDSCR Trigger: CCGGCACGAGTCGGAGCAACCACGGCGTCCGCAGTTCGGGGACCAGCTCAGGGGTCCTGATGGTGGGCCCAAACTTCCGAGTCGGCAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | TGTGGGGCCCATACCAGTCCCTATGCGGTGACCGTCCCGCGCTCCGCCCCGGCTGGGTCGATGTACTCCTaGGCCAGCCCAAAGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: CGAHTSPYAVTVPRSAPAGSMYS*ASPKSM Trigger: CATCGACTTTGGGCTGGCCAAGGAGTACATCGACCC...AGCCGGGGCGGAGCGCGGGACGGTCACCGCATAGGGACTGGTATGGGCCCCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS GCA 90 bp | AGGGCACGTCAGGGTGGACGGTGCCGATGGGTGTCGGCAGGGGCTTaGCGGCCCAGTCATACTCGTAGTCAAACACGTAGCCGCTGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RARQGGRCRWVSAGA*RPSHTRSQTRSRCG Trigger: ACCGCAGCGGCTACGTGTTTGACTACGAGTATGACTGGGCCGGCAAGCCCCTGCCGACACCCATCGGCACCGTCCACCCTGACGTGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | GCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTTATGGAGTGCTGCCGCTaGCTGCCCGGCCGCCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: APHHQGHCQFPRHPPGDLMECCR*LPGRPT Trigger: GGTTGGGCGGCCGGGCAGCAAGCGGCAGCACTCCAT...AAGATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | AGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGAGGTGTCGGCAGGGGCTaGCCGGCCCAGTCATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: SPERWCLQVGQGAPHHQGGVGRG*PAQSYS Trigger: CGAGTATGACTGGGCCGGCAAGCCCCTGCCGACACC...TCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | GGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCCGACTCGTGCCGGTTTaGGACATTCTCCTGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPQVPKDGACRWAKEPHTRLVPV*DILLPS Trigger: GGAGGGCAGGAGAATGTCCAAAACCGGCACGAGTCG...GGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | AGGGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACATGCCGACTCGGAAGTTaGGGCCCACCATCAGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: RDPKSRKMVPAGGPRSPTCRLGS*GPPSGP Trigger: GGGTCCTGATGGTGGGCCCAAACTTCCGAGTCGGCA...TGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | TCTGCTGCCCCAGGCCTGGCGTTAAGGCGATTCTGTCCCGTGGGCCCTGCACGCCACACAGCACCTCGATaGGTGTGGCACGCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAAPGLALRRFCPVGPARHTAPR*VWHAWC Trigger: ACACCAAGCGTGCCACACCAATCGAGGTGCTGTGTG...GCGTGCAGGGCCCACGGGACAGAATCGCCTTAACGCCAGGCCTGGGGCAGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR CAA 90 bp | GAGCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTGCCGACTCGGAAGTTaGGGCCCACCATCAGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: EPHTTKDTASFLDTRLGICRLGS*GPPSGP Trigger: GGGTCCTGATGGTGGGCCCAAACTTCCGAGTCGGCA...GATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | GACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACGGCGGCTCTGCTCTTaGCCCAAGTGCGTGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: DPKSRKMVPAGGPRSPTPRRLCS*PKCVLM Trigger: CATCAACACGCACTTGGGCAAAGAGCAGAGCCGCCG...TGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | TCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACATGTGGGGCCCGGGACTaGATGGGCTCCAGCTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: SRKMVPAGGPRSPTPPRTCGARD*MGSSLI Trigger: TATCAAGCTGGAGCCCATCAAGTCCCGGGCCCCACA...TGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | GGAGCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATTGTGGGGCCCGGGACTaGATGGGCTCCAGCTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: GAPHHQGHCQFPRHPPGDCGARD*MGSSLI Trigger: TATCAAGCTGGAGCCCATCAAGTCCCGGGCCCCACA...ATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | CCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCACACACAGCACCTCGATaGGTGTGGCACGCTTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PKSRKMVPAGGPRSPTPPHTAPR*VWHAWC Trigger: ACACCAAGCGTGCCACACCAATCGAGGTGCTGTGTG...TGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | GGAGTTGAGCGCCTGGTTCTTGGTGTGGAGCTGAGCTTTGTCGCGATGTGGTGGAGGTGTCGCAGGGGCTaGCCGGCCCAGTCATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: GVERLVLGVELSFVAMWWRCRRG*PAQSYS Trigger: CGAGTATGACTGGGCCGGCAAGCCCCTGCGACACCT...CCACCACATCGCGACAAAGCTCAGCTCCACACCAAGAACCAGGCGCTCAACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
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| CDS-3UTR CAA 90 bp | GCCCCACACCACCAAGGACACTGCCAGTTTCCTAGACACCCGCCTGGGGATCTTCGACTCGTGCCGGTTTaGGACATTCTCCTGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: APHHQGHCQFPRHPPGDLRLVPV*DILLPS Trigger: GGAGGGCAGGAGAATGTCCAAAACCGGCACGAGTCG...AAGATCCCCAGGCGGGTGTCTAGGAAACTGGCAGTGTCCTTGGTGGTGTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS-3UTR CAA 90 bp | CGGCCGCCCTGGTACTGTGGGGCCCATACCAGTCCCTATGCGGTGACCGTCCCGTTGATGGGCTCCAGCTaGATAGCCACGTACTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RPPWYCGAHTSPYAVTVPLMGSS*IATYSF Trigger: AAATGAGTACGTGGCTATCAAGCTGGAGCCCATCAA...CGGGACGGTCACCGCATAGGGACTGGTATGGGCCCCACAGTACCAGGGCGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS-3UTR CAA 90 bp | AGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGAGGGTCGATGTACTCCTaGGCCAGCCCAAAGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPERWCLQVGQGAPHHQGGSMYS*ASPKSM Trigger: CATCGACTTTGGGCTGGCCAAGGAGTACATCGACCC...TCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS-3UTR CAA 90 bp | AAAGCAAGAACTCAGTTCCCACGACCAAGGCCTGGCCCTCCTGTGGGACCGCCTCGGCGGCTCTGCTCTTaGCCCAAGTGCGTGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KARTQFPRPRPGPPVGPPRRLCS*PKCVLM Trigger: CATCAACACGCACTTGGGCAAAGAGCAGAGCCGCCG...AGGCGGTCCCACAGGAGGGCCAGGCCTTGGTCGTGGGAACTGAGTTCTTGCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
||
| CDS-3UTR CAA 90 bp | AGGGACCCCAAGTCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACATCTCCATTAGTGGAGTaGAGCGCCTGGTTCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RDPKSRKMVPAGGPRSPTSPLVE*SAWFLV Trigger: CACCAAGAACCAGGCGCTCAACTCCACTAATGGAGA...TGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGACTTGGGGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS CCA 90 bp | CCTCCGGGAAGCTCTCACACAGCACCTCGATTGGTGTGGCACGCTTaGTGTCTCCAATCTTCTGGTAGCGCTCCTTCAGCGTGTCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPGSSHTAPRLVWHA*CLQSSGSAPSACLP Trigger: AGGCAGACACGCTGAAGGAGCGCTACCAGAAGATTGGAGACACCAAGCGTGCCACACCAATCGAGGTGCTGTGTGAGAGCTTCCCGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS-3UTR CAA 90 bp | TCCCGAAAGATGGTGCCTGCAGGTGGGCCAAGGAGCCCCACACCACCAAGGACATCTCCATTAGTGGAGTaGAGCGCCTGGTTCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRKMVPAGGPRSPTPPRTSPLVE*SAWFLV Trigger: CACCAAGAACCAGGCGCTCAACTCCACTAATGGAGA...TGTCCTTGGTGGTGTGGGGCTCCTTGGCCCACCTGCAGGCACCATCTTTCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS GCA 72 bp | GGCCCACCATCAGGACCCCTGAGCTGGTCCCCGAACTaGGGACGCCGTGGTTGCTCCGACTCGTGCCGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GPPSGPLSWSPN*GRRGCSDSCRF Trigger: AAACCGGCACGAGTCGGAGCAACCACGGCGTCCGCAGTTCGGGGACCAGCTCAGGGGTCCTGATGGTGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS TCA 72 bp | GCCGACTCGGAAGTTTGGGCCCACCATCAGGACCCCTaGGCTGGTCCCCGAACTGCGGACGCCGTGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ADSEVWAHHQDP*AGPRTADAVVA Trigger: AGCAACCACGGCGTCCGCAGTTCGGGGACCAGCTCAGGGGTCCTGATGGTGGGCCCAAACTTCCGAGTCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS CCA 72 bp | CTCGGAAGTTTGGGCCCACCATCAGGACCCCTGAGCTaGTCCCCGAACTGCGGACGCCGTGGTTGCTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LGSLGPPSGPLS*SPNCGRRGCSD Trigger: GTCGGAGCAACCACGGCGTCCGCAGTTCGGGGACCAGCTCAGGGGTCCTGATGGTGGGCCCAAACTTCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS GCA 72 bp | CAGGGTGGACGGTGCCGATGGGTGTCGGCAGGGGCTTaGCGGCCCAGTCATACTCGTAGTCAAACACGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGGRCRWVSAGA*RPSHTRSQTRS Trigger: GCTACGTGTTTGACTACGAGTATGACTGGGCCGGCAAGCCCCTGCCGACACCCATCGGCACCGTCCACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS CCA 72 bp | TGCGGACGCCGTGGTTGCTCCGACTCGTGCCGGTTTTaGACATTCTCCTGCCCTCCTCCAACTCCCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CGRRGCSDSCRF*TFSCPPPTPPS Trigger: GGAAGGGGGAGTTGGAGGAGGGCAGGAGAATGTCCAAAACCGGCACGAGTCGGAGCAACCACGGCGTCCGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
||
| CDS CCA 72 bp | CCTGAGGGACGCCCTCTGCGAAGGAAACATCCATGCTaGGTGTCCGGAGCCACTGCTGGCCTAGGAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PEGRPLRRKHPC*VSGATAGLGVL Trigger: CAGCACTCCTAGGCCAGCAGTGGCTCCGGACACCCAGCATGGATGTTTCCTTCGCAGAGGGCGTCCCTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
||
| CDS CAA 72 bp | CTGCGGACGCCGTGGTTGCTCCGACTCGTGCCGGTTTaGGACATTCTCCTGCCCTCCTCCAACTCCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LRTPWLLRLVPV*DILLPSSNSPF Trigger: GAAGGGGGAGTTGGAGGAGGGCAGGAGAATGTCCAAAACCGGCACGAGTCGGAGCAACCACGGCGTCCGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS GCA 72 bp | AGACCTGAGGGACGCCCTCTGCGAAGGAAACATCCATaGTGGGTGTCCGGAGCCACTGCTGGCCTAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: RPEGRPLRRKHP*WVSGATAGLGV Trigger: CACTCCTAGGCCAGCAGTGGCTCCGGACACCCAGCATGGATGTTTCCTTCGCAGAGGGCGTCCCTCAGGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079773.14 |
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| CDS GCA 72 bp | TCAGGACAGGATGGAGCCGCAGGTGTCGCAGGGGCTTaGCGGCCCAGTCATACTCGTAGTCAAACACGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SGQDGAAGVAGA*RPSHTRSQTRS Trigger: GCTACGTGTTTGACTACGAGTATGACTGGGCCGGCAAGCCCCTGCGACACCTGCGGCTCCATCCTGTCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220163.2 |
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| CDS CCA 72 bp | AGCTCTCACACAGCACCTCGATTGGTGTGGCACGCTTaGTGTCTCCAATCTTCTGGTAGCGCTCCTTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SSHTAPRLVWHA*CLQSSGSAPSA Trigger: CGCTGAAGGAGCGCTACCAGAAGATTGGAGACACCAAGCGTGCCACACCAATCGAGGTGCTGTGTGAGAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS CAA 72 bp | CCATCTCCTCCGGGAAGCTCTCACACAGCACCTCGATaGGTGTGGCACGCTTGGTGTCTCCAATCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: PSPPGSSHTAPR*VWHAWCLQSSG Trigger: ACCAGAAGATTGGAGACACCAAGCGTGCCACACCAATCGAGGTGCTGTGTGAGAGCTTCCCGGAGGAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS CCA 72 bp | CATCTCCTCCGGGAAGCTCTCACACAGCACCTCGATTaGTGTGGCACGCTTGGTGTCTCCAATCTTCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: HLLREALTQHLD*CGTLGVSNLLV Trigger: TACCAGAAGATTGGAGACACCAAGCGTGCCACACCAATCGAGGTGCTGTGTGAGAGCTTCCCGGAGGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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| CDS TCA 72 bp | AGTCAAACACGTAGCCGCTGCGGTCAAAGAGGTCAGTaGAGAGCTTCCTCAGGTAGTCGTAGTCTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SQTRSRCGQRGQ*RASSGSRSLAS Trigger: AGAAGCCAGACTACGACTACCTGAGGAAGCTCTTCACTGACCTCTTTGACCGCAGCGGCTACGTGTTTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079773.14 ENSMUST00000085435.7 |
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