RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSNK1G1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032384

Ensembl transcript IDs: ENSMUST00000034949.10, ENSMUST00000117849.3, ENSMUST00000130798.3, ENSMUST00000136773.3, ENSMUST00000154589.2, ENSMUST00000205379.2, ENSMUST00000205884.2, ENSMUST00000206048.2, ENSMUST00000206528.2, ENSMUST00000206594.2, ENSMUST00000206969.2, ENSMUST00000207167.2, ENSMUST00000208011.2

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCAACCAGATAGCCCAAGGGCAAGCAGTGGAGAAGCAGCAGCTCTaGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCAC +
Preference number: 1 (lower is better)
Translates to: VNQIAQGQAVEKQQL*TRSELRQRGLPLAH
Trigger: GTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCCAGAGCTGCTGCTTCTCCACTGCTTGCCCTTGGGCTATCTGGTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR CCA 90 bp CAAGTGTCGGGTGAGATGGAGCAAGTGGACCTGGATGCAAGGAGATaGAGGGGGTTGCCTGTGCCCGAGGATCTGCTGAGCTTGCAGTCA +
Preference number: 1 (lower is better)
Translates to: QVSGEMEQVDLDARR*RGLPVPEDLLSLQS
Trigger: TGACTGCAAGCTCAGCAGATCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCCATCTCACCCGACACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CCA 90 bp AATGCCTGCTGTCTCAAGTGTCGGGTGAGATGGAGCAAGTGGACCTaGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCGAGGATCTGC +
Preference number: 1 (lower is better)
Translates to: NACCLKCRVRWSKWT*MQGDGGGCLCPRIC
Trigger: GCAGATCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCCATCTCACCCGACACTTGAGACAGCAGGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 90 bp CCTGTCATTCTCTGCTCTGCCTCAGAGCCAGCTTACTCGCTGGTCTaGGCAGCTCACCGAGATCAGTTCGCAGGAGCTGTGCTGTCTCTG +
Preference number: 1 (lower is better)
Translates to: PVILCSASEPAYSLV*AAHRDQFAGAVLSL
Trigger: CAGAGACAGCACAGCTCCTGCGAACTGATCTCGGTGAGCTGCTCAGACCAGCGAGTAAGCTGGCTCTGAGGCAGAGCAGAGAATGACAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR TCA 90 bp ACCCACATGGCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTaGGGGTCTCTGGAATCAACCTGCCCACCTGGGGCAATCGAGGGA +
Preference number: 1 (lower is better)
Translates to: THMANPDGYLVILAP*GSLESTCPPGAIEG
Trigger: TCCCTCGATTGCCCCAGGTGGGCAGGTTGATTCCAGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR CCA 90 bp TGGATCTCTACCCTCCCCCACAGAGGAGTCCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTT +
Preference number: 1 (lower is better)
Translates to: WISTLPHRGVPSNEK*QELQVQLEPESPGL
Trigger: AAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGTGGGGGAGGGTAGAGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR CCA 90 bp TGCAGCCAAGCTGGTCACTGCCTTTACTTTACCTTGGAAGCAGGGTaGGGGAGGCACTTAGTAGGGCAGAGAGTGCCAGGTTGCCACCAT +
Preference number: 1 (lower is better)
Translates to: CSQAGHCLYFTLEAG*GRHLVGQRVPGCHH
Trigger: ATGGTGGCAACCTGGCACTCTCTGCCCTACTAAGTGCCTCCCCCACCCTGCTTCCAAGGTAAAGTAAAGGCAGTGACCAGCTTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 90 bp TGGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCGAGGATCTGCTaGGCTTGCAGTCAGGCAGGTAAAAGAAGCAGGGATGTGCATGAA +
Preference number: 1 (lower is better)
Translates to: WMQGDGGGCLCPRIC*ACSQAGKRSRDVHE
Trigger: TTCATGCACATCCCTGCTTCTTTTACCTGCCTGACTGCAAGCTCAGCAGATCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CCA 90 bp TCTTTCCTGTCATTCTCTGCTCTGCCTCAGAGCCAGCTTACTCGCTaGTCTGAGCAGCTCACCGAGATCAGTTCGCAGGAGCTGTGCTGT +
Preference number: 1 (lower is better)
Translates to: SFLSFSALPQSQLTR*SEQLTEISSQELCC
Trigger: ACAGCACAGCTCCTGCGAACTGATCTCGGTGAGCTGCTCAGACCAGCGAGTAAGCTGGCTCTGAGGCAGAGCAGAGAATGACAGGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR TCA 90 bp TTTGCTCCTGGACAGACCCGAAGTAGAAGAATGTTAAGGCAGTCATaGGTGTTCACCAGCTGCTGGGACATTCAGTGCAGCCTTGGGGGC +
Preference number: 1 (lower is better)
Translates to: FAPGQTRSRRMLRQS*VFTSCWDIQCSLGG
Trigger: GCCCCCAAGGCTGCACTGAATGTCCCAGCAGCTGGTGAACACTCATGACTGCCTTAACATTCTTCTACTTCGGGTCTGTCCAGGAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 90 bp TCTGAGCAGCTCACCGAGATCAGTTCGCAGGAGCTGTGCTGTCTCTaGGAAGAAAGCCCACAAAGCAGAGTGCACACATCCATCTGTGAG +
Preference number: 1 (lower is better)
Translates to: SEQLTEISSQELCCL*EESPQSRVHTSICE
Trigger: CTCACAGATGGATGTGTGCACTCTGCTTTGTGGGCTTTCTTCTCAGAGACAGCACAGCTCCTGCGAACTGATCTCGGTGAGCTGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR GCA 90 bp CGCAGGAGCTGTGCTGTCTCTGAGAAGAAAGCCCACAAAGCAGAGTaGACACATCCATCTGTGAGTACATGCATCCCCCACGAAATGGCT +
Preference number: 1 (lower is better)
Translates to: RRSCAVSEKKAHKAE*THPSVSTCIPHEMA
Trigger: AGCCATTTCGTGGGGGATGCATGTACTCACAGATGGATGTGTGCACTCTGCTTTGTGGGCTTTCTTCTCAGAGACAGCACAGCTCCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR CCA 90 bp GATAGTACAGTATCAAATGCCTGCTGTCTCAAGTGTCGGGTGAGATaGAGCAAGTGGACCTGGATGCAAGGAGATGGAGGGGGTTGCCTG +
Preference number: 1 (lower is better)
Translates to: DSTVSNACCLKCRVR*SKWTWMQGDGGGCL
Trigger: CAGGCAACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCCATCTCACCCGACACTTGAGACAGCAGGCATTTGATACTGTACTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 90 bp CTCCAGATAGTACAGTATCAAATGCCTGCTGTCTCAAGTGTCGGGTaGGATGGAGCAAGTGGACCTGGATGCAAGGAGATGGAGGGGGTT +
Preference number: 1 (lower is better)
Translates to: LQIVQYQMPAVSSVG*DGASGPGCKEMEGV
Trigger: AACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCCATCTCACCCGACACTTGAGACAGCAGGCATTTGATACTGTACTATCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 90 bp GCCTTGGGGGCAGTCTGGAGCAAGAATTCTGAAAATCCACTTATATaGCTGAACACTTTACACCCTGGTGTAACCCTGGCCTGGCTGGAC +
Preference number: 1 (lower is better)
Translates to: ALGAVWSKNSENPLI*LNTLHPGVTLAWLD
Trigger: GTCCAGCCAGGCCAGGGTTACACCAGGGTGTAAAGTGTTCAGTCATATAAGTGGATTTTCAGAATTCTTGCTCCAGACTGCCCCCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 90 bp TTGGTTGAGCTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTaGTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCAC +
Preference number: 1 (lower is better)
Translates to: LVELTTFISGSLSSH*SLMVPELSVKAVSH
Trigger: GTGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAGCTCAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
3UTR GCA 90 bp ACAGCAAAGCTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTaGTGTCTCAAGTGTCGGGTGAGATGGAGCAAGTGGACCTGGATG +
Preference number: 1 (lower is better)
Translates to: TAKLEETPDSTVSNA*CLKCRVRWSKWTWM
Trigger: CATCCAGGTCCACTTGCTCCATCTCACCCGACACTTGAGACAGCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAGCTTTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CCA 90 bp AAAGGGACCTTTGCTACAAAACCCAAATACCTAGTAAGGGATTTGTaGGTGCTGGAGGGTGCCAACAGTGCATTAGGAAGGACACTCCCC +
Preference number: 1 (lower is better)
Translates to: KGTFATKPKYLVRDL*VLEGANSALGRTLP
Trigger: GGGGAGTGTCCTTCCTAATGCACTGTTGGCACCCTCCAGCACCCACAAATCCCTTACTAGGTATTTGGGTTTTGTAGCAAAGGTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CCA 90 bp GCAGTCATGAGTGTTCACCAGCTGCTGGGACATTCAGTGCAGCCTTaGGGGCAGTCTGGAGCAAGAATTCTGAAAATCCACTTATATGAC +
Preference number: 1 (lower is better)
Translates to: AVMSVHQLLGHSVQP*GQSGARILKIHLYD
Trigger: GTCATATAAGTGGATTTTCAGAATTCTTGCTCCAGACTGCCCCCAAGGCTGCACTGAATGTCCCAGCAGCTGGTGAACACTCATGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 90 bp TACAAAACCCAAATACCTAGTAAGGGATTTGTGGGTGCTGGAGGGTaGCAACAGTGCATTAGGAAGGACACTCCCCCACATACACAAACC +
Preference number: 1 (lower is better)
Translates to: YKTQIPSKGFVGAGG*QQCIRKDTPPHTQT
Trigger: GGTTTGTGTATGTGGGGGAGTGTCCTTCCTAATGCACTGTTGGCACCCTCCAGCACCCACAAATCCCTTACTAGGTATTTGGGTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 90 bp AGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTaGTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCAC +
Preference number: 1 (lower is better)
Translates to: SLISMAFISGSLSSH*SLMVPELSVKAVSH
Trigger: GTGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
3UTR CCA 90 bp AGAAATCCAGAGATAAGTGCTCATCACCCACATGGCCAATCCAGATaGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCTGGAATCAAC +
Preference number: 1 (lower is better)
Translates to: RNPEISAHHPHGQSR*VPSYSGSLRVSGIN
Trigger: GTTGATTCCAGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGGGTGATGAGCACTTATCTCTGGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR GCA 90 bp TTTCCCTGGAATTTCCTAGCACCAACCAATCTTACCTTCTCTGCTTaGAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGCTATGGATA +
Preference number: 1 (lower is better)
Translates to: FPWNFLAPTNLTFSA*SSPMYHVLSLLLWI
Trigger: TATCCATAGCAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATTGGTTGGTGCTAGGAAATTCCAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR CCA 90 bp CACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTaGAGAGGGTTGAGGATGGTGCAAGAGCCAGGAGTAAAAAGGGGG +
Preference number: 1 (lower is better)
Translates to: HQLLDRAFSLVVSLC*RGLRMVQEPGVKRG
Trigger: CCCCCTTTTTACTCCTGGCTCTTGCACCATCCTCAACCCTCTCCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR CCA 90 bp TTTAACTTTAAGGAAGATGAGAATTCCTCAGGTTTGGGATCACCTTaGCGTGTCACTGGCCTTGAAAGGATCACCACCACCCTGCACGTT +
Preference number: 1 (lower is better)
Translates to: FNFKEDENSSGLGSP*RVTGLERITTTLHV
Trigger: AACGTGCAGGGTGGTGGTGATCCTTTCAAGGCCAGTGACACGCCAAGGTGATCCCAAACCTGAGGAATTCTCATCTTCCTTAAAGTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 90 bp TGGGACATTCAGTGCAGCCTTGGGGGCAGTCTGGAGCAAGAATTCTaGAAATCCACTTATATGACTGAACACTTTACACCCTGGTGTAAC +
Preference number: 1 (lower is better)
Translates to: WDIQCSLGGSLEQEF*KSTYMTEHFTPWCN
Trigger: GTTACACCAGGGTGTAAAGTGTTCAGTCATATAAGTGGATTTTCAGAATTCTTGCTCCAGACTGCCCCCAAGGCTGCACTGAATGTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 90 bp AATATTACTCAGGATGACGCAGAGTTTGGCTTCTTCTCTTCCAAGTaGTGCAAATCAGACTCTTTCCATCAAAAATGTCCTCTGGACCCA +
Preference number: 1 (lower is better)
Translates to: NITQDDAEFGFFSSK*CKSDSFHQKCPLDP
Trigger: TGGGTCCAGAGGACATTTTTGATGGAAAGAGTCTGATTTGCAGCACTTGGAAGAGAAGAAGCCAAACTCTGCGTCATCCTGAGTAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR TCA 90 bp ACCACCTTAAAACAAAGTTGCCTGATAAACAAAGGAATTCTAATTTaGTTCCTACCAACCCATCATGGGGAAGGCTGGAGTCATTGGCCA +
Preference number: 1 (lower is better)
Translates to: TTLKQSCLINKGILI*FLPTHHGEGWSHWP
Trigger: TGGCCAATGACTCCAGCCTTCCCCATGATGGGTTGGTAGGAATCAAATTAGAATTCCTTTGTTTATCAGGCAACTTTGTTTTAAGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR GCA 90 bp TTGAGGAAATGCTTCCTAGGCGCCTGTGGACTTATTCTTGAGAAATaGAGCCATACTAGCTCAACATGGAGGGGAATGAATTATCTTTTA +
Preference number: 1 (lower is better)
Translates to: LRKCFLGACGLILEK*SHTSSTWRGMNYLL
Trigger: TAAAAGATAATTCATTCCCCTCCATGTTGAGCTAGTATGGCTGCATTTCTCAAGAATAAGTCCACAGGCGCCTAGGAAGCATTTCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR CCA 90 bp TGTAATACATCCAATGGGAATTGCTGCATCAACATTACTTTCCATTaGAGAGTTATAGCATTTTTGGTTTCATCTTTCCTGTCATTCTCT +
Preference number: 1 (lower is better)
Translates to: CNTSNGNCCINITFH*RVIAFLVSSFLSFS
Trigger: AGAGAATGACAGGAAAGATGAAACCAAAAATGCTATAACTCTCCAATGGAAAGTAATGTTGATGCAGCAATTCCCATTGGATGTATTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR CCA 90 bp GGTCACAGTCTGGCTCGGTGCTCATCCCACGGGCTCAGGAGCTGGGCTCAAGCTGACACACCTGGGAAGTaGAGAAGTTCTCCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: GHSLARCSSHGLRSWAQADTPGK*RSSPAQ
Trigger: CTGGGCTGGAGAACTTCTCCACTTCCCAGGTGTGTC...AGCTTGAGCCCAGCTCCTGAGCCCGTGGGATGAGCACCGAGCCAGACTGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CCA 90 bp TGGCGTGTCACTGGCCTTGAAAGGATCACCACCACCCTGCACGTTAAAGGGACCCCTGGCTGCCTGCACTaGCTCCTTCTGGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: WRVTGLERITTTLHVKGTPGCLH*LLLGAS
Trigger: AGATGCCCCCAGAAGGAGCCAGTGCAGGCAGCCAGG...GGTCCCTTTAACGTGCAGGGTGGTGGTGATCCTTTCAAGGCCAGTGACACGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp CAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAAAGGAATGGCCCACTCGGCCCTaGCTGCCTGCACTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: QCNFTGGKEGGRKGRTKEWPTRP*LPALAP
Trigger: AGGAGCCAGTGCAGGCAGCCAGGGCCGAGTGGGCCA...TTCCTTTGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR TCA 90 bp TGGCGTGTCACTGGCCTTGAAAGGATCACCACCACCCTGCACGTTAAAGGGACCTATGGGGAAGGGGTCTaGCCTGACTTCTCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: WRVTGLERITTTLHVKGTYGEGV*PDFSLP
Trigger: TGGCAGGGAGAAGTCAGGTCAGACCCCTTCCCCATA...GGTCCCTTTAACGTGCAGGGTGGTGGTGATCCTTTCAAGGCCAGTGACACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp GACCTGGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCGAGGATCTGCTGAGCCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: DLDARRWRGLPVPEDLLSPSNEK*QELQVQ
Trigger: TTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...GCTCAGCAGATCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp TCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGGACCCGGTCAGGCTTaGCTTGCTGTGCGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: SGSLSSHCSLMVPELSVKGPGQA*LAVRLL
Trigger: AAGCAGCCGCACAGCAAGCCAAGCCTGACCGGGTCC...CTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR-3UTR TCA 90 bp CCACATGGCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCTTGCCCGAGGATCTGCTaGGCTTGCAGTCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: PHGQSRWVPSYSGSLRVSCPRIC*ACSQAG
Trigger: ACCTGCCTGACTGCAAGCTCAGCAGATCCTCGGGCA...AGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR GCA 90 bp ATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCACTCCTGTGCGGCTGCTTCTaGCACCTGCTTTCATTCCCA +
Preference number: 2 (lower is better)
Translates to: IPLLTDGPRTVSEGCLPLLCGCF*HLLSFP
Trigger: TGGGAATGAAAGCAGGTGGCAGAAGCAGCCGCACAG...GAGTGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR-3UTR CCA 90 bp CTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGCTACCTGGCTGCCTGCACTaGCTCCTTCTGGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: LTFSACSSPMYHVLSLLLPGCLH*LLLGAS
Trigger: AGATGCCCCCAGAAGGAGCCAGTGCAGGCAGCCAGG...TAGCAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR GCA 90 bp GCTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGGTCAGGCTTGGCTTaGTGTGCGGCTGCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: ANHLYFRFTVIPLLTDGPRSGLA*CAAASA
Trigger: GGCAGAAGCAGCCGCACAGCAAGCCAAGCCTGACCG...GGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
3UTR-3UTR CCA 90 bp CTTGTGTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAAGCTGCAGGTGCAATTaGAGCCAGAGTCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LVSYSVTSQEGRREGGRESCRCN*SQSPQD
Trigger: GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCT...TTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGACACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR TCA 90 bp TTGGTGCATTGGAGTGAGCTCCAGTGGGGTCATCGACATTCAGCTCTCCATTGGGCTGTCTCCCACTCCTaGCATCTGGTTAGTGTGGAC +
Preference number: 2 (lower is better)
Translates to: LVHWSELQWGHRHSALHWAVSHS*HLVSVD
Trigger: GTCCACACTAACCAGATGTCAGGAGTGGGAGACAGC...CCAATGGAGAGCTGAATGTCGATGACCCCACTGGAGCTCACTCCAATGCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
3UTR-3UTR GCA 90 bp CTGGCTGGACCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGGTGGGTGCTGGAGGGTaGCAACAGTGCATTAGGAAG +
Preference number: 2 (lower is better)
Translates to: LAGPQSAQTAMSQGQQSSVGAGG*QQCIRK
Trigger: CTTCCTAATGCACTGTTGGCACCCTCCAGCACCCAC...CGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGGTCCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR GCA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCGCTGCTTCTGCCACCTaGTTTCATTCCCAGCACATG +
Preference number: 2 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGAASAT*FHSQHM
Trigger: CATGTGCTGGGAATGAAAGCAGGTGGCAGAAGCAGC...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR-3UTR GCA 90 bp GGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGCTGCTTCTGCCACCTaGTTTCATTCCCAGCACATG +
Preference number: 2 (lower is better)
Translates to: GSLSSHCSLMVPELSVKAAASAT*FHSQHM
Trigger: CATGTGCTGGGAATGAAAGCAGGTGGCAGAAGCAGC...AGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR-3UTR CCA 90 bp GAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTTCCAATCGAAATGGGACTTTGGCCCACTCGGCCCTaGCTGCCTGCACTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: EILGTCCFLQFVPIEMGLWPTRP*LPALAP
Trigger: AGGAGCCAGTGCAGGCAGCCAGGGCCGAGTGGGCCA...AAGTCCCATTTCGATTGGAACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp GGAGACTTACCTAGTCGCCTGACTCAGACATCTTCACAGACCCTGTTTGCTCCTGAGGTGCCTTCTGGTTaGTCACAGTCTGGCTCGGTG +
Preference number: 2 (lower is better)
Translates to: GDLPSRLTQTSSQTLFAPEVPSG*SQSGSV
Trigger: CACCGAGCCAGACTGTGACCAACCAGAAGGCACCTC...AGGAGCAAACAGGGTCTGTGAAGATGTCTGAGTCAGGCGACTAGGTAAGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp GTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACATGCACTGGCTCCTTCTaGGGGCATCTGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: VLQCNFTGGKEGGRKGRTCTGSF*GHLFSS
Trigger: AGAAGAAAACAGATGCCCCCAGAAGGAGCCAGTGCA...TGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp AGTATCTCCTCTCTGAGACGAGGTGCCTTCTGGTTGGTCACAGTCTGGCTCGGTACTACCAGACACACCTaGGAAGTGGAGAAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: SISSLRRGAFWLVTVWLGTTRHT*EVEKFS
Trigger: GGAGAACTTCTCCACTTCCCAGGTGTGTCTGGTAGT...ACCGAGCCAGACTGTGACCAACCAGAAGGCACCTCGTCTCAGAGAGGAGATACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACAACCCTGTGGCCAGCTaGGCTGAGGGGTTACCCAGG +
Preference number: 2 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDNPVAS*AEGLPR
Trigger: CCTGGGTAACCCCTCAGCCCAGCTGGCCACAGGGTT...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR CCA 90 bp GGTCACAGTCTGGCTCGGTGCTCATCCCACGGGCTCAGGAGCTGGGCTCAAGCTATCAAAAATGTCCTCTaGACCCACATTTTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: GHSLARCSSHGLRSWAQAIKNVL*THIFSE
Trigger: TTCAGAGAAAATGTGGGTCCAGAGGACATTTTTGAT...AGCTTGAGCCCAGCTCCTGAGCCCGTGGGATGAGCACCGAGCCAGACTGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CCA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGGAGGTGCCTTCTGGTTaGTCACAGTCTGGCTCGGTG +
Preference number: 2 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLEVPSG*SQSGSV
Trigger: CACCGAGCCAGACTGTGACCAACCAGAAGGCACCTC...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CCA 90 bp TTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAACCCACTCCTGACATCTaGTTAGTGTGGACCCGGTCA +
Preference number: 2 (lower is better)
Translates to: FRFTVIPLLTDGPRTVSEPTPDI*LVWTRS
Trigger: TGACCGGGTCCACACTAACCAGATGTCAGGAGTGGG...TTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR-3UTR TCA 90 bp CCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGAGGAAACTCAAGCAGGGATGTGCATaGAGCCTCAAGTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: PQSAQTAMSQGQQSSRKLKQGCA*SLKCWA
Trigger: AGCCCAGCACTTGAGGCTTCATGCACATCCCTGCTT...GAGTTTCCTCGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR GCA 90 bp CCACATGGCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCTACAGGGACAGTAGACTaGAGACTGCTCACAGCTTGT +
Preference number: 2 (lower is better)
Translates to: PHGQSRWVPSYSGSLRVSTGTVD*RLLTAC
Trigger: ACAAGCTGTGAGCAGTCTGCAGTCTACTGTCCCTGT...AGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR GCA 90 bp TTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGCTGCTTCTGCCACCTaGTTTCATTCCCAGCACATG +
Preference number: 2 (lower is better)
Translates to: FRFTVIPLLTDGPRTVSEAASAT*FHSQHM
Trigger: CATGTGCTGGGAATGAAAGCAGGTGGCAGAAGCAGC...TTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR-3UTR CCA 90 bp TCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAATGCACTGGCTCCTTCTaGGGGCATCTGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SYSVTSQEGRREGGREGQCTGSF*GHLFSS
Trigger: AGAAGAAAACAGATGCCCCCAGAAGGAGCCAGTGCA...TTGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp CTATCTTCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTCCTGGCTGCCTGCACTaGCTCCTTCTGGGGGCATCT +
Preference number: 2 (lower is better)
Translates to: LSSWPHHQLLDRAFSLVVPGCLH*LLLGAS
Trigger: AGATGCCCCCAGAAGGAGCCAGTGCAGGCAGCCAGG...AACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGAAGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp CTGGCTGGACCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGCTTCCCCTATCTTCTTaGCCACACCACCAGCTTCTT +
Preference number: 2 (lower is better)
Translates to: LAGPQSAQTAMSQGQQSSLPLSS*PHHQLL
Trigger: AAGAAGCTGGTGGTGTGGCCAAGAAGATAGGGGAAG...CGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGGTCCAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp TTCCTTTCCTTTGCTCAGAACCACAGGCATATTTTGCTACAGCCCGGAGCAAGGGACACACCTGGGAAGTaGAGAAGTTCTCCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: FLSFAQNHRHILLQPGARDTPGK*RSSPAQ
Trigger: CTGGGCTGGAGAACTTCTCCACTTCCCAGGTGTGTC...CCTTGCTCCGGGCTGTAGCAAAATATGCCTGTGGTTCTGAGCAAAGGAAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp CCACATGGCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCTACTACCAGACACACCTaGGAAGTGGAGAAGTTCTCC +
Preference number: 2 (lower is better)
Translates to: PHGQSRWVPSYSGSLRVSTTRHT*EVEKFS
Trigger: GGAGAACTTCTCCACTTCCCAGGTGTGTCTGGTAGT...AGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR CCA 90 bp CCACATGGCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCTTCTGAATGGCTTGGCTaGCCCATCCCCCTTGAAAAA +
Preference number: 2 (lower is better)
Translates to: PHGQSRWVPSYSGSLRVSSEWLG*PIPLEK
Trigger: TTTTTCAAGGGGGATGGGCCAGCCAAGCCATTCAGA...AGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR CCA 90 bp GCTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCCCACTCCTGACATCTaGTTAGTGTGGACCCGGTCA +
Preference number: 2 (lower is better)
Translates to: ANHLYFRFTVIPLLTDGPPTPDI*LVWTRS
Trigger: TGACCGGGTCCACACTAACCAGATGTCAGGAGTGGG...GGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
3UTR-3UTR GCA 90 bp GAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTTCCAATCGAAATGGGACTTGGCAGGAGCTGCAGGTaGAATTGGAGCCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: EILGTCCFLQFVPIEMGLGRSCR*NWSQSP
Trigger: GGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCC...AAGTCCCATTTCGATTGGAACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR GCA 90 bp CCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGGGCAGGAGCTGCAGGTaGAATTGGAGCCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: PHHQLLDRAFSLVVSLCWGRSCR*NWSQSP
Trigger: GGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCC...CCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR GCA 90 bp CAGACTCTTTCCATCAAAAATGTCCTCTGGACCCACATTTTCTCTGAATGGCTTTCAGACAGAGGGGATTaGCACTGGCCCACTCGGCCC +
Preference number: 2 (lower is better)
Translates to: QTLSIKNVLWTHIFSEWLSDRGD*HWPTRP
Trigger: GGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGA...AAGCCATTCAGAGAAAATGTGGGTCCAGAGGACATTTTTGATGGAAAGAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CCA 90 bp CCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGAGGAAACTCCACATTTTCTCTGAATaGCTTGGCTGGCCCATCCCC +
Preference number: 2 (lower is better)
Translates to: PQSAQTAMSQGQQSSRKLHIFSE*LGWPIP
Trigger: GGGGATGGGCCAGCCAAGCCATTCAGAGAAAATGTG...GAGTTTCCTCGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp GGAGCAAGTGGACCTGGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCGAGGAAAAGAAATGGCCAGGTaGCAATATTTACAAATGCTA +
Preference number: 2 (lower is better)
Translates to: GASGPGCKEMEGVACARGKEMAR*QYLQML
Trigger: TAGCATTTGTAAATATTGCCACCTGGCCATTTCTTT...TCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp CAAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACGGACCCGGTCAGGCTTaGCTTGCTGTGCGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: QVLFQWPLFQVHCHPTAHGPGQA*LAVRLL
Trigger: AAGCAGCCGCACAGCAAGCCAAGCCTGACCGGGTCC...GTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
3UTR-3UTR TCA 90 bp TCAAGGACAGCAAAGCTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTGCGCTCAAGCTCTGGGCTaGTTGATTAGGTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: SRTAKLEETPDSTVSNACAQALG*LIRSGL
Trigger: CAGCCCAGACCTAATCAATCAGCCCAGAGCTTGAGC...GCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAGCTTTGCTGTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR TCA 90 bp TCAAGGACAGCAAAGCTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTGCGTCTCAAGTGTCGGGTaGGATGGAGCAAGTGGACCT +
Preference number: 2 (lower is better)
Translates to: SRTAKLEETPDSTVSNACVSSVG*DGASGP
Trigger: AGGTCCACTTGCTCCATCTCACCCGACACTTGAGAC...GCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAGCTTTGCTGTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR GCA 90 bp TCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTAGGCAGGAGCTGCAGGTaGAATTGGAGCCAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: SWPHHQLLDRAFSLVVSLGRSCR*NWSQSP
Trigger: GGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCC...TAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR GCA 90 bp CCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGAGGAAACTCGACCTGACTTCTCCCTaGCACTCTGATTCACAGACA +
Preference number: 2 (lower is better)
Translates to: PQSAQTAMSQGQQSSRKLDLTSP*HSDSQT
Trigger: TGTCTGTGAATCAGAGTGGCAGGGAGAAGTCAGGTC...GAGTTTCCTCGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR GCA 90 bp AAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTCGGTCAGGCTTGGCTTaGTGTGCGGCTGCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: KSYFNGLYFRFTVIPLLTRSGLA*CAAASA
Trigger: GGCAGAAGCAGCCGCACAGCAAGCCAAGCCTGACCG...AGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
3UTR-3UTR CCA 90 bp GTGAATGACACCTTCACTGTAAACAATGGGAAGAGAGTCAACCAGATAGCCCAAAGCTGCAGGTGCAATTaGAGCCAGAGTCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: VNDTFTVNNGKRVNQIAQSCRCN*SQSPQD
Trigger: GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCT...TTGGGCTATCTGGTTGACTCTCTTCCCATTGTTTACAGTGAAGGTGTCATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp CTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGCTATCTTTTGTCCACTACTaGCAATACGGTGGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: LTFSACSSPMYHVLSLLLSFVHY*QYGGGC
Trigger: ACACCCACCACCGTATTGCCAGTAGTGGACAAAAGA...TAGCAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CCA 90 bp TCAAGGACAGCAAAGCTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTGCTGGAGCAAGTGGACCTaGATGCAAGGAGATGGAGGG +
Preference number: 2 (lower is better)
Translates to: SRTAKLEETPDSTVSNACWSKWT*MQGDGG
Trigger: CCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCCA...GCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAGCTTTGCTGTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp GAAAAGGAAGTGAACACTTTCAGAAATCTTGGGGACTTGCTGTTTCCTGCAGTTGGTGTAACCCTGGCCTaGCTGGACCTCAGTCTGCTC +
Preference number: 2 (lower is better)
Translates to: EKEVNTFRNLGDLLFPAVGVTLA*LDLSLL
Trigger: GAGCAGACTGAGGTCCAGCCAGGCCAGGGTTACACC...AACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR GCA 90 bp CACAGTCCAATAGAACAGGTAAGGTGCACAAACTCTGCTTCATTTGATACTAAATCAGACAGAGGGGATTaGCACTGGCCCACTCGGCCC +
Preference number: 2 (lower is better)
Translates to: HSPIEQVRCTNSASFDTKSDRGD*HWPTRP
Trigger: GGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGA...TTTAGTATCAAATGAAGCAGAGTTTGTGCACCTTACCTGTTCTATTGGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR GCA 90 bp ATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCTGTGCGGCTGCTTCTaGCACCTGCTTTCATTCCCA +
Preference number: 2 (lower is better)
Translates to: ISMAFISGSLSSHCSLMVLCGCF*HLLSFP
Trigger: TGGGAATGAAAGCAGGTGGCAGAAGCAGCCGCACAG...GACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
3UTR-3UTR CCA 90 bp CTGGCTGGACCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGCAACAGAAAGTCACATaGCTATCTAGTAGGAAGTCC +
Preference number: 2 (lower is better)
Translates to: LAGPQSAQTAMSQGQQSSQQKVT*LSSRKS
Trigger: GGACTTCCTACTAGATAGCCATGTGACTTTCTGTTG...CGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGGTCCAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CAA 90 bp GTTAAAGGGACCTTTGCTACAAAACCCAAATACCTAGTAAGGGATTaGTGGGTGCTGGAGGGTGCCAACAGTGCATTAGGAAGGACACTC +
Preference number: 2 (lower is better)
Translates to: VKGTFATKPKYLVRD*WVLEGANSALGRTL
Trigger: GAGTGTCCTTCCTAATGCACTGTTGGCACCCTCCAGCACCCACAAATCCCTTACTAGGTATTTGGGTTTTGTAGCAAAGGTCCCTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CAA 90 bp GGGGAAGGCTGGAGTCATTGGCCATCAACCTCTACCTGGACTTCCTaGAAGTCTGCAAAATCAAGAAATCCAGAGATAAGTGCTCATCAC +
Preference number: 2 (lower is better)
Translates to: GEGWSHWPSTSTWTS*KSAKSRNPEISAHH
Trigger: GTGATGAGCACTTATCTCTGGATTTCTTGATTTTGCAGACTTCAAGGAAGTCCAGGTAGAGGTTGATGGCCAATGACTCCAGCCTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR TCA 90 bp AAGGAAGTGAACACTTTCAGAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTTATGCTGGAGAGGGTTaGGGATGGTGCAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: KEVNTFRNLGDLLFPAVCYAGEG*GWCKSQ
Trigger: CTGGCTCTTGCACCATCCTCAACCCTCTCCAGCATA...ACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR TCA 90 bp CACAGTCCAATAGAACAGGTAAGGTGCACAAACTCTGCTTCATTTGATACTAAAACAAAGGAAGGGACCTaGACCCTGTGGCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: HSPIEQVRCTNSASFDTKTKEGT*TLWPAG
Trigger: CCCAGCTGGCCACAGGGTTCAGGTCCCTTCCTTTGT...TTTAGTATCAAATGAAGCAGAGTTTGTGCACCTTACCTGTTCTATTGGACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR GCA 90 bp AGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGCTGTGCGGCTGCTTCTaGCACCTGCTTTCATTCCCA +
Preference number: 2 (lower is better)
Translates to: SLISMAFISGSLSSHCSLLCGCF*HLLSFP
Trigger: TGGGAATGAAAGCAGGTGGCAGAAGCAGCCGCACAG...CAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
3UTR-3UTR CCA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGGTAGTTTCTTTATGCTaGAGAGGGTTGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLVVSLC*RGLRMV
Trigger: CACCATCCTCAACCCTCTCCAGCATAAAGAAACTAC...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CCA 90 bp GAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTTCCAATCGAAATGGGACTTCACATTTTCTCTGAATaGCTTGGCTGGCCCATCCCC +
Preference number: 2 (lower is better)
Translates to: EILGTCCFLQFVPIEMGLHIFSE*LGWPIP
Trigger: GGGGATGGGCCAGCCAAGCCATTCAGAGAAAATGTG...AAGTCCCATTTCGATTGGAACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp CAAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACCCCACTCCTGACATCTaGTTAGTGTGGACCCGGTCA +
Preference number: 2 (lower is better)
Translates to: QVLFQWPLFQVHCHPTAHPTPDI*LVWTRS
Trigger: TGACCGGGTCCACACTAACCAGATGTCAGGAGTGGG...GTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
3UTR-3UTR TCA 90 bp AAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGCTGTCTCCCACTCCTaGCATCTGGTTAGTGTGGAC +
Preference number: 2 (lower is better)
Translates to: KSYFNGLYFRFTVIPLLTAVSHS*HLVSVD
Trigger: GTCCACACTAACCAGATGTCAGGAGTGGGAGACAGC...AGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
3UTR-3UTR GCA 90 bp TCAAGGACAGCAAAGCTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTGCAAAGAAGCAGGGATGTaGATGAAGCCTCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: SRTAKLEETPDSTVSNACKEAGM*MKPQVL
Trigger: CAGCACTTGAGGCTTCATGCACATCCCTGCTTCTTT...GCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAGCTTTGCTGTCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp CCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGCCTTCCAATGAGAAATaGCAGGAGCTGCAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: PHHQLLDRAFSLVVSLCWPSNEK*QELQVQ
Trigger: TTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...CCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp AGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGAGAGGGTTGAGGATGGTGCAACCTTCCAATGAGAAATaGCAGGAGCTGCAGGTGCAA +
Preference number: 2 (lower is better)
Translates to: RAFSLVVSLCWRGLRMVQPSNEK*QELQVQ
Trigger: TTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG...TTGCACCATCCTCAACCCTCTCCAGCATAAAGAAACTACTAAGCTAAAGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp CACACAGGGACAGTAGACTGCAGACTGCTCACAGCTTGTGTCCTACAGTGTAACCTTCACTGTAAACAATaGGAAGAGAGTCAACCAGAT +
Preference number: 2 (lower is better)
Translates to: HTGTVDCRLLTACVLQCNLHCKQ*EESQPD
Trigger: ATCTGGTTGACTCTCTTCCCATTGTTTACAGTGAAG...GTTACACTGTAGGACACAAGCTGTGAGCAGTCTGCAGTCTACTGTCCCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp AAGGAAGTGAACACTTTCAGAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTCTAGTAAGGGATTTGTaGGTGCTGGAGGGTGCCAAC +
Preference number: 2 (lower is better)
Translates to: KEVNTFRNLGDLLFPAVCLVRDL*VLEGAN
Trigger: GTTGGCACCCTCCAGCACCCACAAATCCCTTACTAG...ACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR TCA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGGAGAATAGTAGTCCTTaGGTTTTTGTGAATGACACC +
Preference number: 2 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLENSSP*VFVNDT
Trigger: GGTGTCATTCACAAAAACTCAAGGACTACTATTCTC...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR TCA 90 bp TTCCTTTCCTTTGCTCAGAACCACAGGCATATTTTGCTACAGCCCGGAGCAAGGGAGAATAGTAGTCCTTaGGTTTTTGTGAATGACACC +
Preference number: 2 (lower is better)
Translates to: FLSFAQNHRHILLQPGARENSSP*VFVNDT
Trigger: GGTGTCATTCACAAAAACTCAAGGACTACTATTCTC...CCTTGCTCCGGGCTGTAGCAAAATATGCCTGTGGTTCTGAGCAAAGGAAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR GCA 90 bp GAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTTCCAATCGAAATGGGACTTCAATCTTACCTTCTCTaGTTGCAGCAGCCCCATGTA +
Preference number: 2 (lower is better)
Translates to: EILGTCCFLQFVPIEMGLQSYLL*LQQPHV
Trigger: TACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATTG...AAGTCCCATTTCGATTGGAACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR GCA 90 bp TCAAGGACAGCAAAGCTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTGCTCAGAGTTGCCCACATaGCAAATGAGGGACTGTATA +
Preference number: 2 (lower is better)
Translates to: SRTAKLEETPDSTVSNACSELPT*QMRDCI
Trigger: TATACAGTCCCTCATTTGGCATGTGGGCAACTCTGA...GCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAGCTTTGCTGTCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGCTTCACTGTAAACAATaGGAAGAGAGTCAACCAGAT +
Preference number: 2 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLLHCKQ*EESQPD
Trigger: ATCTGGTTGACTCTCTTCCCATTGTTTACAGTGAAG...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CCA 90 bp AAGGAAGTGAACACTTTCAGAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTGTGAGATGGAGCAAGTaGACCTGGATGCAAGGAGAT +
Preference number: 2 (lower is better)
Translates to: KEVNTFRNLGDLLFPAVCVRWSK*TWMQGD
Trigger: ATCTCCTTGCATCCAGGTCCACTTGCTCCATCTCAC...ACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACACAGAAGGGCCATGGTaGCCTCTTCCTTTTCATAAT +
Preference number: 2 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDTEGPW*PLPFHN
Trigger: ATTATGAAAAGGAAGAGGCCACCATGGCCCTTCTGT...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR TCA 90 bp CACAGTCCAATAGAACAGGTAAGGTGCACAAACTCTGCTTCATTTGATACTAAATCAGTATCTCCTCTCTaGGACGAGGTGCCTTCTGGT +
Preference number: 2 (lower is better)
Translates to: HSPIEQVRCTNSASFDTKSVSPL*DEVPSG
Trigger: ACCAGAAGGCACCTCGTCTCAGAGAGGAGATACTGA...TTTAGTATCAAATGAAGCAGAGTTTGTGCACCTTACCTGTTCTATTGGACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR GCA 90 bp GAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTTCCAATCGAAATGGGACTTTCAGTCTGCTCAAACTaGAATGTCTCAAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: EILGTCCFLQFVPIEMGLSVCSN*NVSRTA
Trigger: TGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGA...AAGTCCCATTTCGATTGGAACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR GCA 90 bp GAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTTCCAATCGAAATGGGACTTAAGCAAAGAGTTCTGTaGTGTACTAAGTCACTAGCC +
Preference number: 2 (lower is better)
Translates to: EILGTCCFLQFVPIEMGLKQRVL*CTKSLA
Trigger: GGCTAGTGACTTAGTACAGCACAGAACTCTTTGCTT...AAGTCCCATTTCGATTGGAACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CCA 90 bp CACAGTCCAATAGAACAGGTAAGGTGCACAAACTCTGCTTCATTTGATACTAAATCTGAATGGCTTGGCTaGCCCATCCCCCTTGAAAAA +
Preference number: 2 (lower is better)
Translates to: HSPIEQVRCTNSASFDTKSEWLG*PIPLEK
Trigger: TTTTTCAAGGGGGATGGGCCAGCCAAGCCATTCAGA...TTTAGTATCAAATGAAGCAGAGTTTGTGCACCTTACCTGTTCTATTGGACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR CAA 90 bp AACCACCTTAAAACAAAGTTGCCTGATAAACAAAGGAATTCTAATTaGATTCCTACCAACCCATCATGGGGAAGGCTGGAGTCATTGGCC +
Preference number: 2 (lower is better)
Translates to: NHLKTKLPDKQRNSN*IPTNPSWGRLESLA
Trigger: GGCCAATGACTCCAGCCTTCCCCATGATGGGTTGGTAGGAATCAAATTAGAATTCCTTTGTTTATCAGGCAACTTTGTTTTAAGGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR TCA 90 bp CTATCTTCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTGAGAATAGTAGTCCTTaGGTTTTTGTGAATGACACC +
Preference number: 2 (lower is better)
Translates to: LSSWPHHQLLDRAFSLVVENSSP*VFVNDT
Trigger: GGTGTCATTCACAAAAACTCAAGGACTACTATTCTC...AACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGAAGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp CTATCTTCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTCTTCACTGTAAACAATaGGAAGAGAGTCAACCAGAT +
Preference number: 2 (lower is better)
Translates to: LSSWPHHQLLDRAFSLVVLHCKQ*EESQPD
Trigger: ATCTGGTTGACTCTCTTCCCATTGTTTACAGTGAAG...AACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGAAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CCA 90 bp TCCATTCGAGAAAGCAACTGGATGGCTATCATTAACACCGTCTTCAAAGTAAACAAAGTAATAAACCTGTaGGAGGCCTTCACCTGCACT +
Preference number: 2 (lower is better)
Translates to: SIRESNWMAIINTVFKVNKVINL*EAFTCT
Trigger: AGTGCAGGTGAAGGCCTCCCACAGGTTTATTACTTT...GTTTACTTTGAAGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207167.2
3UTR-3UTR GCA 90 bp GAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTTCCAATCGAAATGGGACTTATAGAACAGGTAAGGTaGACAAACTCTGCTTCATTT +
Preference number: 2 (lower is better)
Translates to: EILGTCCFLQFVPIEMGLIEQVR*TNSASF
Trigger: AAATGAAGCAGAGTTTGTGCACCTTACCTGTTCTAT...AAGTCCCATTTCGATTGGAACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR GCA 90 bp AAACTTACAAACTCACAGAAGGGCCATGGTGGCCTCTTCCTTTTCATAATCAAATTCTCTTCCAAGTGCTaGAAATCAGACTCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: KLTNSQKGHGGLFLFIIKFSSKC*KSDSFH
Trigger: ATGGAAAGAGTCTGATTTGCAGCACTTGGAAGAGAA...TTTGATTATGAAAAGGAAGAGGCCACCATGGCCCTTCTGTGAGTTTGTAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR GCA 90 bp CACAGTCCAATAGAACAGGTAAGGTGCACAAACTCTGCTTCATTTGATACTAAAAAGCAAAGAGTTCTGTaGTGTACTAAGTCACTAGCC +
Preference number: 2 (lower is better)
Translates to: HSPIEQVRCTNSASFDTKKQRVL*CTKSLA
Trigger: GGCTAGTGACTTAGTACAGCACAGAACTCTTTGCTT...TTTAGTATCAAATGAAGCAGAGTTTGTGCACCTTACCTGTTCTATTGGACTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CCA 90 bp CATACTCCATTCGAGAAAGCAACTGGATGGCTATCATTAACACCGTCTTCAAAGATTGTACTTCCCACATaGTCCAAAGTAATAAACCTG +
Preference number: 2 (lower is better)
Translates to: HTPFEKATGWLSLTPSSKIVLPT*SKVINL
Trigger: CAGGTTTATTACTTTGGACCATGTGGGAAGTACAAT...CTTTGAAGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAATGGAGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207167.2
3UTR-3UTR GCA 90 bp AAACTTACAAACTCACAGAAGGGCCATGGTGGCCTCTTCCTTTTCATAATCAAACTTATTCTTGAGAAATaGAGCCATACTAGCTCAACA +
Preference number: 2 (lower is better)
Translates to: KLTNSQKGHGGLFLFIIKLILEK*SHTSST
Trigger: TGTTGAGCTAGTATGGCTGCATTTCTCAAGAATAAG...TTTGATTATGAAAAGGAAGAGGCCACCATGGCCCTTCTGTGAGTTTGTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR GCA 72 bp ACGAGGTGCCTTCTGGTTGGTCACAGTCTGGCTCGGTaGTCATCCCACGGGCTCAGGAGCTGGGCTCAAGCT +
Preference number: 3 (lower is better)
Translates to: TRCLLVGHSLAR*SSHGLRSWAQA
Trigger: AGCTTGAGCCCAGCTCCTGAGCCCGTGGGATGAGCACCGAGCCAGACTGTGACCAACCAGAAGGCACCTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR TCA 72 bp CTCTGCTCTGCCTCAGAGCCAGCTTACTCGCTGGTCTaGGCAGCTCACCGAGATCAGTTCGCAGGAGCTGTG +
Preference number: 3 (lower is better)
Translates to: LCSASEPAYSLV*AAHRDQFAGAV
Trigger: CACAGCTCCTGCGAACTGATCTCGGTGAGCTGCTCAGACCAGCGAGTAAGCTGGCTCTGAGGCAGAGCAGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR TCA 72 bp GTCCCCGAACTGTCAGTGAAGGCTGTCTCCCACTCCTaGCATCTGGTTAGTGTGGACCCGGTCAGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: VPELSVKAVSHS*HLVSVDPVRLG
Trigger: GCCAAGCCTGACCGGGTCCACACTAACCAGATGTCAGGAGTGGGAGACAGCCTTCACTGACAGTTCGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR GCA 72 bp GACCCGGTCAGGCTTGGCTTGCTGTGCGGCTGCTTCTaGCACCTGCTTTCATTCCCAGCACATGATTCCTGC +
Preference number: 3 (lower is better)
Translates to: DPVRLGLLCGCF*HLLSFPAHDSC
Trigger: GCAGGAATCATGTGCTGGGAATGAAAGCAGGTGGCAGAAGCAGCCGCACAGCAAGCCAAGCCTGACCGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR CCA 72 bp TGTCTCAAGTGTCGGGTGAGATGGAGCAAGTGGACCTaGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCG +
Preference number: 3 (lower is better)
Translates to: CLKCRVRWSKWT*MQGDGGGCLCP
Trigger: CGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCCATCTCACCCGACACTTGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 72 bp AGTGTGGACCCGGTCAGGCTTGGCTTGCTGTGCGGCTaGTTCTGCCACCTGCTTTCATTCCCAGCACATGAT +
Preference number: 3 (lower is better)
Translates to: SVDPVRLGLLCG*FCHLLSFPAHD
Trigger: ATCATGTGCTGGGAATGAAAGCAGGTGGCAGAAGCAGCCGCACAGCAAGCCAAGCCTGACCGGGTCCACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR GCA 72 bp GACATCTGGTTAGTGTGGACCCGGTCAGGCTTGGCTTaGTGTGCGGCTGCTTCTGCCACCTGCTTTCATTCC +
Preference number: 3 (lower is better)
Translates to: DIWLVWTRSGLA*CAAASATCFHS
Trigger: GGAATGAAAGCAGGTGGCAGAAGCAGCCGCACAGCAAGCCAAGCCTGACCGGGTCCACACTAACCAGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR CCA 72 bp GCACCAAAAGGTTTCACCGACCCTGAAAGGTGGGCTTaGGGTAACCAGGACGGCAGCTGTCTGCACACTGCT +
Preference number: 3 (lower is better)
Translates to: APKGFTDPERWA*GNQDGSCLHTA
Trigger: AGCAGTGTGCAGACAGCTGCCGTCCTGGTTACCCCAAGCCCACCTTTCAGGGTCGGTGAAACCTTTTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR CAA 90 bp GAGGGGGTTGCCTGTGCCCGAGGATCTGCTGAGCTTGCAGTCAGGCAGGTAAAATCTTCCCCTATCTTCTaGGCCACACCACCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: EGVACARGSAELAVRQVKSSPIF*ATPPAS
Trigger: AGAAGCTGGTGGTGTGGCCAAGAAGATAGGGGAAGA...TTTTACCTGCCTGACTGCAAGCTCAGCAGATCCTCGGGCACAGGCAACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CAA 90 bp GGTCACAGTCTGGCTCGGTGCTCATCCCACGGGCTCAGGAGCTGGGCTCAAGCTTCAGTTTCCTTTCCTTaGCTCAGAACCACAGGCATA +
Preference number: 3 (lower is better)
Translates to: GHSLARCSSHGLRSWAQASVSFP*LRTTGI
Trigger: TATGCCTGTGGTTCTGAGCAAAGGAAAGGAAACTGA...AGCTTGAGCCCAGCTCCTGAGCCCGTGGGATGAGCACCGAGCCAGACTGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CAA 90 bp TGGCGTGTCACTGGCCTTGAAAGGATCACCACCACCCTGCACGTTAAAGGGACCTACCTAGTAAGGGATTaGTGGGTGCTGGAGGGTGCC +
Preference number: 3 (lower is better)
Translates to: WRVTGLERITTTLHVKGTYLVRD*WVLEGA
Trigger: GGCACCCTCCAGCACCCACAAATCCCTTACTAGGTA...GGTCCCTTTAACGTGCAGGGTGGTGGTGATCCTTTCAAGGCCAGTGACACGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 72 bp GCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTaGGGGTCTCTGGAATCAACCTGCCCACCTGGGGCA +
Preference number: 3 (lower is better)
Translates to: ANPDGYLVILAP*GSLESTCPPGA
Trigger: TGCCCCAGGTGGGCAGGTTGATTCCAGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR CCA 72 bp GCTGGTCACTGCCTTTACTTTACCTTGGAAGCAGGGTaGGGGAGGCACTTAGTAGGGCAGAGAGTGCCAGGT +
Preference number: 3 (lower is better)
Translates to: AGHCLYFTLEAG*GRHLVGQRVPG
Trigger: ACCTGGCACTCTCTGCCCTACTAAGTGCCTCCCCCACCCTGCTTCCAAGGTAAAGTAAAGGCAGTGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 72 bp ACAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTaGAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTG +
Preference number: 3 (lower is better)
Translates to: TEESLPMRNGRS*RCNWSQSPQDL
Trigger: CAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
3UTR CCA 72 bp TTGTTCAGTATCTCCTCTCTGAGACGAGGTGCCTTCTaGTTGGTCACAGTCTGGCTCGGTGCTCATCCCACG +
Preference number: 3 (lower is better)
Translates to: LFSISSLRRGAF*LVTVWLGAHPT
Trigger: CGTGGGATGAGCACCGAGCCAGACTGTGACCAACCAGAAGGCACCTCGTCTCAGAGAGGAGATACTGAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR-3UTR CAA 90 bp CCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGAGGAAACTCGAGCTGCAGGTGCAATaGGAGCCAGAGTCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: PQSAQTAMSQGQQSSRKLELQVQ*EPESPG
Trigger: TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTC...GAGTTTCCTCGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 72 bp CTCACCGAGATCAGTTCGCAGGAGCTGTGCTGTCTCTaGGAAGAAAGCCCACAAAGCAGAGTGCACACATCC +
Preference number: 3 (lower is better)
Translates to: LTEISSQELCCL*EESPQSRVHTS
Trigger: GGATGTGTGCACTCTGCTTTGTGGGCTTTCTTCTCAGAGACAGCACAGCTCCTGCGAACTGATCTCGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR CCA 72 bp GTATCAAATGCCTGCTGTCTCAAGTGTCGGGTGAGATaGAGCAAGTGGACCTGGATGCAAGGAGATGGAGGG +
Preference number: 3 (lower is better)
Translates to: VSNACCLKCRVR*SKWTWMQGDGG
Trigger: CCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCCATCTCACCCGACACTTGAGACAGCAGGCATTTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CAA 90 bp CCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGCTCAGACAGAGGGGATaGCCACTGGCCCACTCGGCC +
Preference number: 3 (lower is better)
Translates to: PHHQLLDRAFSLVVSLCWLRQRG*PLAHSA
Trigger: GGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAG...CCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR GCA 72 bp CCTGAGACTCCTCTGGCAGTTGGAAGGCAAATGTGGTaGCTTCTTTTGTCCACTACTGGCAATACGGTGGTG +
Preference number: 3 (lower is better)
Translates to: PETPLAVGRQMW*LLLSTTGNTVV
Trigger: CACCACCGTATTGCCAGTAGTGGACAAAAGAAGGCACCACATTTGCCTTCCAACTGCCAGAGGAGTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR GCA 72 bp AGTAAGGGATTTGTGGGTGCTGGAGGGTGCCAACAGTaGATTAGGAAGGACACTCCCCCACATACACAAACC +
Preference number: 3 (lower is better)
Translates to: SKGFVGAGGCQQ*IRKDTPPHTQT
Trigger: GGTTTGTGTATGTGGGGGAGTGTCCTTCCTAATGCACTGTTGGCACCCTCCAGCACCCACAAATCCCTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CCA 72 bp AGTGTTCACCAGCTGCTGGGACATTCAGTGCAGCCTTaGGGGCAGTCTGGAGCAAGAATTCTGAAAATCCAC +
Preference number: 3 (lower is better)
Translates to: SVHQLLGHSVQP*GQSGARILKIH
Trigger: GTGGATTTTCAGAATTCTTGCTCCAGACTGCCCCCAAGGCTGCACTGAATGTCCCAGCAGCTGGTGAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CAA 90 bp GACCTGGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCGAGGATCTGCTGAGCCAGAAATTTGCTTTGTaGTTGTTGTTCAGTATCTCC +
Preference number: 3 (lower is better)
Translates to: DLDARRWRGLPVPEDLLSQKFAL*LLFSIS
Trigger: GGAGATACTGAACAACAACAACAAAGCAAATTTCTG...GCTCAGCAGATCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CAA 90 bp CTATCTTCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTGAGCTGCAGGTGCAATaGGAGCCAGAGTCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: LSSWPHHQLLDRAFSLVVELQVQ*EPESPG
Trigger: TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTC...AACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGAAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CAA 90 bp GTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACATTTCTTCTTTTTGGTTaGGATCTCTACCCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: VLQCNFTGGKEGGRKGRTFLLFG*DLYPPP
Trigger: TGGGGGAGGGTAGAGATCCAAACCAAAAAGAAGAAA...TGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CAA 90 bp AAACTTACAAACTCACAGAAGGGCCATGGTGGCCTCTTCCTTTTCATAATCAAACTCAGACAGAGGGGATaGCCACTGGCCCACTCGGCC +
Preference number: 3 (lower is better)
Translates to: KLTNSQKGHGGLFLFIIKLRQRG*PLAHSA
Trigger: GGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAG...TTTGATTATGAAAAGGAAGAGGCCACCATGGCCCTTCTGTGAGTTTGTAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR CAA 90 bp CCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGAGGAAACTCAACCACAGGCATATTTaGCTACAGCCCGGAGCAAGG +
Preference number: 3 (lower is better)
Translates to: PQSAQTAMSQGQQSSRKLNHRHI*LQPGAR
Trigger: CCTTGCTCCGGGCTGTAGCAAAATATGCCTGTGGTT...GAGTTTCCTCGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 72 bp GTACAGTATCAAATGCCTGCTGTCTCAAGTGTCGGGTaGGATGGAGCAAGTGGACCTGGATGCAAGGAGATG +
Preference number: 3 (lower is better)
Translates to: VQYQMPAVSSVG*DGASGPGCKEM
Trigger: CATCTCCTTGCATCCAGGTCCACTTGCTCCATCTCACCCGACACTTGAGACAGCAGGCATTTGATACTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 72 bp GGACAGACCCGAAGTAGAAGAATGTTAAGGCAGTCATaGGTGTTCACCAGCTGCTGGGACATTCAGTGCAGC +
Preference number: 3 (lower is better)
Translates to: GQTRSRRMLRQS*VFTSCWDIQCS
Trigger: GCTGCACTGAATGTCCCAGCAGCTGGTGAACACTCATGACTGCCTTAACATTCTTCTACTTCGGGTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 72 bp CAAATACCTAGTAAGGGATTTGTGGGTGCTGGAGGGTaGCAACAGTGCATTAGGAAGGACACTCCCCCACAT +
Preference number: 3 (lower is better)
Translates to: QIPSKGFVGAGG*QQCIRKDTPPH
Trigger: ATGTGGGGGAGTGTCCTTCCTAATGCACTGTTGGCACCCTCCAGCACCCACAAATCCCTTACTAGGTATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 72 bp GGCGTGTCACTGGCCTTGAAAGGATCACCACCACCCTaGACGTTAAAGGGACCTTTGCTACAAAACCCAAAT +
Preference number: 3 (lower is better)
Translates to: GVSLALKGSPPP*TLKGPLLQNPN
Trigger: ATTTGGGTTTTGTAGCAAAGGTCCCTTTAACGTGCAGGGTGGTGGTGATCCTTTCAAGGCCAGTGACACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CCA 72 bp AAGGAAGATGAGAATTCCTCAGGTTTGGGATCACCTTaGCGTGTCACTGGCCTTGAAAGGATCACCACCACC +
Preference number: 3 (lower is better)
Translates to: KEDENSSGLGSP*RVTGLERITTT
Trigger: GGTGGTGGTGATCCTTTCAAGGCCAGTGACACGCCAAGGTGATCCCAAACCTGAGGAATTCTCATCTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CCA 72 bp GAGATAAGTGCTCATCACCCACATGGCCAATCCAGATaGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: EISAHHPHGQSR*VPSYSGSLRVS
Trigger: AGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGGGTGATGAGCACTTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR CCA 72 bp TTCCTACCAACCCATCATGGGGAAGGCTGGAGTCATTaGCCATCAACCTCTACCTGGACTTCCTTGAAGTCT +
Preference number: 3 (lower is better)
Translates to: FLPTHHGEGWSH*PSTSTWTSLKS
Trigger: AGACTTCAAGGAAGTCCAGGTAGAGGTTGATGGCCAATGACTCCAGCCTTCCCCATGATGGGTTGGTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR CAA 90 bp CTGGCTGGACCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGTCAGTTTCCTTTCCTTaGCTCAGAACCACAGGCATA +
Preference number: 3 (lower is better)
Translates to: LAGPQSAQTAMSQGQQSSSVSFP*LRTTGI
Trigger: TATGCCTGTGGTTCTGAGCAAAGGAAAGGAAACTGA...CGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGGTCCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CAA 90 bp CCACATGGCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCTACACTTTCAGAAATCTaGGGGACTTGCTGTTTCCTG +
Preference number: 3 (lower is better)
Translates to: PHGQSRWVPSYSGSLRVSTLSEI*GTCCFL
Trigger: CAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGT...AGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR TCA 72 bp GTAACCAGGACGGCAGCTGTCTGCACACTGCTGAGATaGCTACAATGTTTCCTGGCTCTTAGACCTTCAAGA +
Preference number: 3 (lower is better)
Translates to: VTRTAAVCTLLR*LQCFLALRPSR
Trigger: TCTTGAAGGTCTAAGAGCCAGGAAACATTGTAGTCATCTCAGCAGTGTGCAGACAGCTGCCGTCCTGGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR GCA 72 bp CTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTaGTGTCTCAAGTGTCGGGTGAGATGGAGCAAGTGG +
Preference number: 3 (lower is better)
Translates to: LEETPDSTVSNA*CLKCRVRWSKW
Trigger: CCACTTGCTCCATCTCACCCGACACTTGAGACAGCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 72 bp CATTTTTGGTTTCATCTTTCCTGTCATTCTCTGCTCTaGCTCAGAGCCAGCTTACTCGCTGGTCTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: HFWFHLSCHSLL*LRASLLAGLSS
Trigger: GCTGCTCAGACCAGCGAGTAAGCTGGCTCTGAGGCAGAGCAGAGAATGACAGGAAAGATGAAACCAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR GCA 72 bp TCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTaGTCACTGATGGTCCCCGAACTGTCAGTGAAGGCT +
Preference number: 3 (lower is better)
Translates to: SMAFISGSLSSH*SLMVPELSVKA
Trigger: AGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
3UTR GCA 72 bp CTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTaGTCACTGATGGTCCCCGAACTGTCAGTGAAGGCT +
Preference number: 3 (lower is better)
Translates to: LTTFISGSLSSH*SLMVPELSVKA
Trigger: AGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
3UTR GCA 72 bp AATTTCCTAGCACCAACCAATCTTACCTTCTCTGCTTaGAGCAGCCCCATGTACCACGTTCTAAGCCTGTTG +
Preference number: 3 (lower is better)
Translates to: NFLAPTNLTFSA*SSPMYHVLSLL
Trigger: CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATTGGTTGGTGCTAGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR CCA 72 bp GGGGAAGGCTGGAGTCATTGGCCATCAACCTCTACCTaGACTTCCTTGAAGTCTGCAAAATCAAGAAATCCA +
Preference number: 3 (lower is better)
Translates to: GEGWSHWPSTST*TSLKSAKSRNP
Trigger: TGGATTTCTTGATTTTGCAGACTTCAAGGAAGTCCAGGTAGAGGTTGATGGCCAATGACTCCAGCCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR CAA 90 bp TTCCTTTCCTTTGCTCAGAACCACAGGCATATTTTGCTACAGCCCGGAGCAAGGTTTCTTCTTTTTGGTTaGGATCTCTACCCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: FLSFAQNHRHILLQPGARFLLFG*DLYPPP
Trigger: TGGGGGAGGGTAGAGATCCAAACCAAAAAGAAGAAA...CCTTGCTCCGGGCTGTAGCAAAATATGCCTGTGGTTCTGAGCAAAGGAAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR-3UTR CAA 90 bp GGAGACTTACCTAGTCGCCTGACTCAGACATCTTCACAGACCCTGTTTGCTCCTTCTGTTTTCTTCTTTTaGGTTTGGATCTCTACCCTC +
Preference number: 3 (lower is better)
Translates to: GDLPSRLTQTSSQTLFAPSVFFF*VWISTL
Trigger: GAGGGTAGAGATCCAAACCAAAAAGAAGAAAACAGA...AGGAGCAAACAGGGTCTGTGAAGATGTCTGAGTCAGGCGACTAGGTAAGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CAA 90 bp AAGGAAGTGAACACTTTCAGAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTTCTTCCCCTATCTTCTaGGCCACACCACCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: KEVNTFRNLGDLLFPAVCSSPIF*ATPPAS
Trigger: AGAAGCTGGTGGTGTGGCCAAGAAGATAGGGGAAGA...ACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR TCA 72 bp CAGTGCAGCCTTGGGGGCAGTCTGGAGCAAGAATTCTaGAAATCCACTTATATGACTGAACACTTTACACCC +
Preference number: 3 (lower is better)
Translates to: QCSLGGSLEQEF*KSTYMTEHFTP
Trigger: GGGTGTAAAGTGTTCAGTCATATAAGTGGATTTTCAGAATTCTTGCTCCAGACTGCCCCCAAGGCTGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 72 bp GTTTCCTTTCCTTTGCTCAGAACCACAGGCATATTTTaGTACAGCCCGGAGCAAGGGATCTGCTTGTCAAAA +
Preference number: 3 (lower is better)
Translates to: VSFPLLRTTGIF*YSPEQGICLSK
Trigger: TTTTGACAAGCAGATCCCTTGCTCCGGGCTGTAGCAAAATATGCCTGTGGTTCTGAGCAAAGGAAAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR CCA 72 bp TTTGCTACAAAACCCAAATACCTAGTAAGGGATTTGTaGGTGCTGGAGGGTGCCAACAGTGCATTAGGAAGG +
Preference number: 3 (lower is better)
Translates to: FATKPKYLVRDL*VLEGANSALGR
Trigger: CCTTCCTAATGCACTGTTGGCACCCTCCAGCACCCACAAATCCCTTACTAGGTATTTGGGTTTTGTAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR-3UTR CAA 90 bp CACAGTCCAATAGAACAGGTAAGGTGCACAAACTCTGCTTCATTTGATACTAAATTTTCTCTGAATGGCTaGGCTGGCCCATCCCCCTTG +
Preference number: 3 (lower is better)
Translates to: HSPIEQVRCTNSASFDTKFSLNG*AGPSPL
Trigger: CAAGGGGGATGGGCCAGCCAAGCCATTCAGAGAAAA...TTTAGTATCAAATGAAGCAGAGTTTGTGCACCTTACCTGTTCTATTGGACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR TCA 72 bp TCCAAAATTATCACAGGCATGGTTTCTAAGGCAGACTaGCCCACATGTTCTAGCTCACTTCAGGCAGACAGA +
Preference number: 3 (lower is better)
Translates to: SKIITGMVSKAD*PTCSSSLQADR
Trigger: TCTGTCTGCCTGAAGTGAGCTAGAACATGTGGGTCAGTCTGCCTTAGAAACCATGCCTGTGATAATTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR TCA 72 bp GCAGTCTGGAGCAAGAATTCTGAAAATCCACTTATATaGCTGAACACTTTACACCCTGGTGTAACCCTGGCC +
Preference number: 3 (lower is better)
Translates to: AVWSKNSENPLI*LNTLHPGVTLA
Trigger: GGCCAGGGTTACACCAGGGTGTAAAGTGTTCAGTCATATAAGTGGATTTTCAGAATTCTTGCTCCAGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CCA 72 bp CTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTaGAGAGGGTTGAGGATGGTGCAAGAGCCAGGAGTA +
Preference number: 3 (lower is better)
Translates to: LDRAFSLVVSLC*RGLRMVQEPGV
Trigger: TACTCCTGGCTCTTGCACCATCCTCAACCCTCTCCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR CCA 72 bp AGCAGCCCCATGTACCACGTTCTAAGCCTGTTGCTATaGATATGCTCCAAAATTATCACAGGCATGGTTTCT +
Preference number: 3 (lower is better)
Translates to: SSPMYHVLSLLL*ICSKIITGMVS
Trigger: AGAAACCATGCCTGTGATAATTTTGGAGCATATCCATAGCAACAGGCTTAGAACGTGGTACATGGGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR TCA 72 bp ATGCAAACTCCTGGTCTTCAAATTCAGGTCATGGTATaGCCGACCGACACTAGACAAAGCATCATCAGAACA +
Preference number: 3 (lower is better)
Translates to: MQTPGLQIQVMV*PTDTRQSIIRT
Trigger: TGTTCTGATGATGCTTTGTCTAGTGTCGGTCGGTCATACCATGACCTGAATTTGAAGACCAGGAGTTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR GCA 72 bp CCCATGTACCACGTTCTAAGCCTGTTGCTATGGATATaGTCCAAAATTATCACAGGCATGGTTTCTAAGGCA +
Preference number: 3 (lower is better)
Translates to: PMYHVLSLLLWI*SKIITGMVSKA
Trigger: TGCCTTAGAAACCATGCCTGTGATAATTTTGGAGCATATCCATAGCAACAGGCTTAGAACGTGGTACATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR CCA 72 bp CAAAGGCAATGTTGGTTATATGACCATGCAAACTCCTaGTCTTCAAATTCAGGTCATGGTATGACCGACCGA +
Preference number: 3 (lower is better)
Translates to: QRQCWLYDHANS*SSNSGHGMTDR
Trigger: TCGGTCGGTCATACCATGACCTGAATTTGAAGACCAGGAGTTTGCATGGTCATATAACCAACATTGCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
3UTR-3UTR CAA 90 bp TGCTCTTTGCCTAGATGTGTGTTGATAGACATGTATCTCGCAGTTCCAGTCAAAACATGCTCTTTCTTATaGCCTTGTCGGCCAATCAAG +
Preference number: 3 (lower is better)
Translates to: CSLPRCVLIDMYLAVPVKTCSFL*PCRPIK
Trigger: CTTGATTGGCCGACAAGGCAATAAGAAAGAGCATGT...TTTGACTGGAACTGCGAGATACATGTCTATCAACACACATCTAGGCAAAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208011.2
3UTR-3UTR CAA 90 bp AGACATGTATCTCGCAGTTCCAGTCAAACTTTTGTGCTCTCTGTAAGGTATGTGCTCTTTCTTATTGCCTaGTCGGCCAATCAAGAAGTT +
Preference number: 3 (lower is better)
Translates to: RHVSRSSSQTFVLSVRYVLFLIA*SANQEV
Trigger: AACTTCTTGATTGGCCGACAAGGCAATAAGAAAGAG...CACATACCTTACAGAGAGCACAAAAGTTTGACTGGAACTGCGAGATACATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208011.2
3UTR TCA 72 bp TCAACACTAAATAAGCACTACAGCACACTTTCCTTCTaGACTAAACTGGAAGTTATTTTACAGAAGATGTAC +
Preference number: 3 (lower is better)
Translates to: STLNKHYSTLSF*TKLEVILQKMY
Trigger: GTACATCTTCTGTAAAATAACTTCCAGTTTAGTTCAGAAGGAAAGTGTGCTGTAGTGCTTATTTAGTGTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR GCA 72 bp AAATTAGAAGAGTGTAATACATCCAATGGGAATTGCTaGATCAACATTACTTTCCATTGGAGAGTTATAGCA +
Preference number: 3 (lower is better)
Translates to: KLEECNTSNGNC*INITFHWRVIA
Trigger: TGCTATAACTCTCCAATGGAAAGTAATGTTGATGCAGCAATTCCCATTGGATGTATTACACTCTTCTAATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR GCA 90 bp GCTCTGGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCTCAGCCTTGAGTCCTTaGCAGGGTAGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ALDPLRAQTEGIATGPLGSALSP*QGRLPR
Trigger: CCGAGGCAGCCTACCCTGGCAAGGACTCAAGGCTGA...GCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp GCTCTGGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCGGTCTGCGGCCAAGTaGGACGTCAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: ALDPLRAQTEGIATGPLGRSAAK*DVRYEV
Trigger: TACCTCATACCTGACGTCTCACTTGGCCGCAGACCG...GCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp GGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGTCAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPAQSSDRGDCHWPTRPWSGMRY*SAGWAG
Trigger: TCCAGCCCAGCCGGCAGACCAATACCTCATACCTGA...CCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp GCTCTGGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCATTGGTGCATTGGAGTaGGCTCCAGTGGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: ALDPLRAQTEGIATGPLGIGALE*APVGSS
Trigger: CGATGACCCCACTGGAGCTCACTCCAATGCACCAAT...GCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGTCATCTCGCCGGCTTTaGTCTTTGCCTAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: GPAQSSDRGDCHWPTRPWSSRRL*SLPRCV
Trigger: CACACATCTAGGCAAAGAGCAAAGCCGGCGAGATGA...CCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp GCTCTGGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCTGGAGTGAGCTCCAGTaGGGTCATCGACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALDPLRAQTEGIATGPLGWSELQ*GHRHSA
Trigger: AGCTGAATGTCGATGACCCCACTGGAGCTCACTCCA...GCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp GGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGCTCGGAGGAAGTACATaGACATATGGCCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GPAQSSDRGDCHWPTRPWLGGST*TYGLRL
Trigger: AAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAG...CCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGCCAGAGGATGTTGAAGTaGCAGATGGTCTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: DPLRAQTEGIATGPLGPGQRMLK*QMVSNS
Trigger: ACTGTTCGAGACCATCTGGCACTTCAACATCCTCTG...GCCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTGAGACCCCCATGGCGGTCTaGGGCCAAGTGAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: EKWQELQVQLEPESPGLETPMAV*GQVRRQ
Trigger: CTGACGTCTCACTTGGCCGCAGACCGCCATGGGGGT...CTCAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp GCTCTGGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCTCGGAGGAAGTACATaGACATATGGCCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALDPLRAQTEGIATGPLGLGGST*TYGLRL
Trigger: AAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAG...GCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GGTCACAGTCTGGCTCGGTGCTCATCCCACGGGCTCAGGAGCTGGGCTCAAGCTTGGGAGGCCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: GHSLARCSSHGLRSWAQAWEAFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGCCTCCCA...AGCTTGAGCCCAGCTCCTGAGCCCGTGGGATGAGCACCGAGCCAGACTGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR GCA 90 bp GGTCACAGTCTGGCTCGGTGCTCATCCCACGGGCTCAGGAGCTGGGCTCAAGCTTCATCTCGCCGGCTTTaGTCTTTGCCTAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: GHSLARCSSHGLRSWAQASSRRL*SLPRCV
Trigger: CACACATCTAGGCAAAGAGCAAAGCCGGCGAGATGA...AGCTTGAGCCCAGCTCCTGAGCCCGTGGGATGAGCACCGAGCCAGACTGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR GCA 90 bp ATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCACTCTCAGCCTTGAGTCCTTaGCAGGGTAGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: IPLLTDGPRTVSEGCLPLSALSP*QGRLPR
Trigger: CCGAGGCAGCCTACCCTGGCAAGGACTCAAGGCTGA...GAGTGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000205884.2
CDS-3UTR GCA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCACCCCCATGGCGGTCTaGGGCCAAGTGAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGTPMAV*GQVRRQ
Trigger: CTGACGTCTCACTTGGCCGCAGACCGCCATGGGGGT...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR CCA 90 bp GGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGAAAGTAATAAACCTGTaGGAGGCCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: GPAQSSDRGDCHWPTRPWKVINL*EAFTCT
Trigger: AGTGCAGGTGAAGGCCTCCCACAGGTTTATTACTTT...CCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp GAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: EESLPMRNGRSCRCNWSQVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATCCAGCCCAGCCGGCAGAC...CTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCGTGGGTGCTGGCGAGTaGGAAAAGGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGVGAGE*EKGPST
Trigger: TGTGCTGGGCCCCTTTTCCCACTCGCCAGCACCCAC...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR CCA 90 bp TCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCGTGGGTGCTGGCGAGTaGGAAAAGGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SLSSHCSLMVPELSVKAVVGAGE*EKGPST
Trigger: TGTGCTGGGCCCCTTTTCCCACTCGCCAGCACCCAC...GACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp GGTCACAGTCTGGCTCGGTGCTCATCCCACGGGCTCAGGAGCTGGGCTCAAGCTCTCGGAGGAAGTACATaGACATATGGCCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GHSLARCSSHGLRSWAQALGGST*TYGLRL
Trigger: AAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAG...AGCTTGAGCCCAGCTCCTGAGCCCGTGGGATGAGCACCGAGCCAGACTGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR TCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACCGGTCTGCGGCCAAGTaGGACGTCAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDRSAAK*DVRYEV
Trigger: TACCTCATACCTGACGTCTCACTTGGCCGCAGACCG...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp TCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGAGCTAACCACCTGTACTaGACCCCCATGGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SNEKWQELQVQLEPESPGANHLY*TPMAVC
Trigger: GCAGACCGCCATGGGGGTTCAGTACAGGTGGTTAGC...TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR GCA 90 bp GGAGCAAGTGGACCTGGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCGAGGATGGGAGGCCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: GASGPGCKEMEGVACARGWEAFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGCCTCCCA...TCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR GCA 90 bp CCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCATCAGCCTTGAGTCCTTaGCAGGGTAGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PSNEKWQELQVQLEPESPSALSP*QGRLPR
Trigger: CCGAGGCAGCCTACCCTGGCAAGGACTCAAGGCTGA...TGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGCATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: DPLRAQTEGIATGPLGPGISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...GCCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATCCAGCCCAGCCGGCAGAC...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp TCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGTGGGTGCTGGCGAGTaGGAAAAGGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SGSLSSHCSLMVPELSVKVGAGE*EKGPST
Trigger: TGTGCTGGGCCCCTTTTCCCACTCGCCAGCACCCAC...CTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
3UTR CAA 72 bp TTCAGTATCTCCTCTCTGAGACGAGGTGCCTTCTGGTaGGTCACAGTCTGGCTCGGTGCTCATCCCACGGGC +
Preference number: 4 (lower is better)
Translates to: FSISSLRRGAFW*VTVWLGAHPTG
Trigger: GCCCGTGGGATGAGCACCGAGCCAGACTGTGACCAACCAGAAGGCACCTCGTCTCAGAGAGGAGATACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR TCA 90 bp TCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACGGTCTGCGGCCAAGTaGGACGTCAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: SNEKWQELQVQLEPESPGRSAAK*DVRYEV
Trigger: TACCTCATACCTGACGTCTCACTTGGCCGCAGACCG...TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp TCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAAGCTAACCACCTGTACTaGACCCCCATGGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SYSVTSQEGRREGGREGQANHLY*TPMAVC
Trigger: GCAGACCGCCATGGGGGTTCAGTACAGGTGGTTAGC...TTGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp CTTGTGTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGCTAACCACCTGTACTaGACCCCCATGGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LVSYSVTSQEGRREGGREANHLY*TPMAVC
Trigger: GCAGACCGCCATGGGGGTTCAGTACAGGTGGTTAGC...TTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGACACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCAGATCTTGGCTGTACTaGACCCCCATGGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGRSWLY*TPMAVC
Trigger: GCAGACCGCCATGGGGGTTCAGTACAGCCAAGATCT...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR GCA 90 bp ACAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCTCAGCCTTGAGTCCTTaGCAGGGTAGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TEESLPMRNGRSCRCNWSSALSP*QGRLPR
Trigger: CCGAGGCAGCCTACCCTGGCAAGGACTCAAGGCTGA...GCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GGAGCAAGTGGACCTGGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCGAGGAATGAGCTGTGATTGGTaGATTGGAGTGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GASGPGCKEMEGVACARGMSCDW*IGVSSS
Trigger: ACTGGAGCTCACTCCAATGCACCAATCACAGCTCAT...TCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR CCA 90 bp GGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGATTCGAGAAAGCAACTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: GPAQSSDRGDCHWPTRPWIRESN*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAAT...CCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp GAGGGGGTTGCCTGTGCCCGAGGATCTGCTGAGCTTGCAGTCAGGCAGGTAAAATGGAGTGAGCTCCAGTaGGGTCATCGACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: EGVACARGSAELAVRQVKWSELQ*GHRHSA
Trigger: AGCTGAATGTCGATGACCCCACTGGAGCTCACTCCA...TTTTACCTGCCTGACTGCAAGCTCAGCAGATCCTCGGGCACAGGCAACCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACAACCCCAGAGGATGTTaGAGTGCCAGATGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDNPRGC*SARWSR
Trigger: TCGAGACCATCTGGCACTTCAACATCCTCTGGGGTT...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp CCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAAGTTGGGTCCCACCATaGGAACCCCAGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: PSNEKWQELQVQLEPESPSWVPP*EPQRML
Trigger: CAACATCCTCTGGGGTTCTCATGGTGGGACCCAACT...TGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp GTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCAAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VIPLLTDGPRTVSEGCLPKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...TGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp CCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGTGAGACGTCAGGTATaGGGTATTGGTCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PSNEKWQELQVQLEPESPVRRQV*GIGLPA
Trigger: AGCCGGCAGACCAATACCTCATACCTGACGTCTCAC...TGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACCTTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDLRHEL*LVHWSE
Trigger: CTCACTCCAATGCACCAATCACAGCTCATGCCGAAG...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACACCTCCACTTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAAGTGGAGGT...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp AGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTGAGGACCTCCACTTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: RNGRSCRCNWSQSPQDLRTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAAGTGGAGGT...CCTCAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR GCA 90 bp TTCCTTTCCTTTGCTCAGAACCACAGGCATATTTTGCTACAGCCCGGAGCAAGGACCCCCATGGCGGTCTaGGGCCAAGTGAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: FLSFAQNHRHILLQPGARTPMAV*GQVRRQ
Trigger: CTGACGTCTCACTTGGCCGCAGACCGCCATGGGGGT...CCTTGCTCCGGGCTGTAGCAAAATATGCCTGTGGTTCTGAGCAAAGGAAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp GCTCTGGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCATTCGAGAAAGCAACTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: ALDPLRAQTEGIATGPLGIRESN*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAAT...GCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp CCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGAGGAAACTCGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PQSAQTAMSQGQQSSRKLVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATCCAGCCCAGCCGGCAGAC...GAGTTTCCTCGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR CCA 90 bp GAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGTATTGGTCTGCCGGCTaGGCTGGATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: EESLPMRNGRSCRCNWSQYWSAG*AGFPTL
Trigger: GAGAGTGGGAAATCCAGCCCAGCCGGCAGACCAATA...CTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCTATTGGTCTGCCGGCTaGGCTGGATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLEPESYWSAG*AGFPTL
Trigger: GAGAGTGGGAAATCCAGCCCAGCCGGCAGACCAATA...GGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp GGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTTCAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSLSSHCSLMVPELSVKASGMRY*SAGWAG
Trigger: TCCAGCCCAGCCGGCAGACCAATACCTCATACCTGA...AGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR CCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLEPESGMRY*SAGWAG
Trigger: TCCAGCCCAGCCGGCAGACCAATACCTCATACCTGA...CTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp TCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGATCAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SNEKWQELQVQLEPESPGSGMRY*SAGWAG
Trigger: TCCAGCCCAGCCGGCAGACCAATACCTCATACCTGA...TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp GAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTGAGTGGAGTGAGCTCCAGTaGGGTCATCGACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: EKWQELQVQLEPESPGLEWSELQ*GHRHSA
Trigger: AGCTGAATGTCGATGACCCCACTGGAGCTCACTCCA...CTCAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACGGCATGAGCTGTGATTaGTGCATTGGAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDGMSCD*CIGVSS
Trigger: GGAGCTCACTCCAATGCACCAATCACAGCTCATGCC...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp CTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGAACCCCAGAGGATGTTaGAGTGCCAGATGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: LPMRNGRSCRCNWSQSPQNPRGC*SARWSR
Trigger: TCGAGACCATCTGGCACTTCAACATCCTCTGGGGTT...CTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp GTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAAACCCCAGAGGATGTTaGAGTGCCAGATGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: VLQCNFTGGKEGGRKGRTNPRGC*SARWSR
Trigger: TCGAGACCATCTGGCACTTCAACATCCTCTGGGGTT...TGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLEPESKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...GGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp CTGGCTGGACCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGGTGAGACGTCAGGTATaGGGTATTGGTCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LAGPQSAQTAMSQGQQSSVRRQV*GIGLPA
Trigger: AGCCGGCAGACCAATACCTCATACCTGACGTCTCAC...CGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGGTCCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR TCA 90 bp GAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTGTGAGACGTCAGGTATaGGGTATTGGTCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: ESLPMRNGRSCRCNWSQSVRRQV*GIGLPA
Trigger: AGCCGGCAGACCAATACCTCATACCTGACGTCTCAC...ACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp AATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTATTGGTGCATTGGAGTaGGCTCCAGTGGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: NEKWQELQVQLEPESPGLIGALE*APVGSS
Trigger: CGATGACCCCACTGGAGCTCACTCCAATGCACCAAT...AAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCTTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLEPESLRHEL*LVHWSE
Trigger: CTCACTCCAATGCACCAATCACAGCTCATGCCGAAG...GGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp TCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCACCTCCACTTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: SLPMRNGRSCRCNWSQSPTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAAGTGGAGGT...GGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR GCA 90 bp GCTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCTCAGCCTTGAGTCCTTaGCAGGGTAGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ANHLYFRFTVIPLLTDGPSALSP*QGRLPR
Trigger: CCGAGGCAGCCTACCCTGGCAAGGACTCAAGGCTGA...GGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR CCA 90 bp GAGGGGGTTGCCTGTGCCCGAGGATCTGCTGAGCTTGCAGTCAGGCAGGTAAAACGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: EGVACARGSAELAVRQVKRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACACAGGGATCG...TTTTACCTGCCTGACTGCAAGCTCAGCAGATCCTCGGGCACAGGCAACCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR CCA 90 bp AATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTTATTGGTCTGCCGGCTaGGCTGGATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: NEKWQELQVQLEPESPGLYWSAG*AGFPTL
Trigger: GAGAGTGGGAAATCCAGCCCAGCCGGCAGACCAATA...AAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp TCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCGGCATGAGCTGTGATTaGTGCATTGGAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLPMRNGRSCRCNWSQSPGMSCD*CIGVSS
Trigger: GGAGCTCACTCCAATGCACCAATCACAGCTCATGCC...GGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp GAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ESLPMRNGRSCRCNWSQSKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...ACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp GGAGACTTACCTAGTCGCCTGACTCAGACATCTTCACAGACCCTGTTTGCTCCTATTGGTGCATTGGAGTaGGCTCCAGTGGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: GDLPSRLTQTSSQTLFAPIGALE*APVGSS
Trigger: CGATGACCCCACTGGAGCTCACTCCAATGCACCAAT...AGGAGCAAACAGGGTCTGTGAAGATGTCTGAGTCAGGCGACTAGGTAAGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp CACACAGGGACAGTAGACTGCAGACTGCTCACAGCTTGTGTCCTACAGTGTAACATTGGTGCATTGGAGTaGGCTCCAGTGGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: HTGTVDCRLLTACVLQCNIGALE*APVGSS
Trigger: CGATGACCCCACTGGAGCTCACTCCAATGCACCAAT...GTTACACTGTAGGACACAAGCTGTGAGCAGTCTGCAGTCTACTGTCCCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp GAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCTTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ESLPMRNGRSCRCNWSQSLRHEL*LVHWSE
Trigger: CTCACTCCAATGCACCAATCACAGCTCATGCCGAAG...ACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp CCACATGGCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCTACCTCCACTTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: PHGQSRWVPSYSGSLRVSTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAAGTGGAGGT...AGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR TCA 90 bp ACAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCACCTCCACTTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: TEESLPMRNGRSCRCNWSTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAAGTGGAGGT...GCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR GCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACCAGAGGATGTTGAAGTaGCAGATGGTCTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDQRMLK*QMVSNS
Trigger: ACTGTTCGAGACCATCTGGCACTTCAACATCCTCTG...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCATCTCGCCGGCTTTaGTCTTTGCCTAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLEPESSRRL*SLPRCV
Trigger: CACACATCTAGGCAAAGAGCAAAGCCGGCGAGATGA...CTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACACCCCCATGGCGGTCTaGGGCCAAGTGAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDTPMAV*GQVRRQ
Trigger: CTGACGTCTCACTTGGCCGCAGACCGCCATGGGGGT...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR GCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACATGAGCTGTGATTGGTaGATTGGAGTGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDMSCDW*IGVSSS
Trigger: ACTGGAGCTCACTCCAATGCACCAATCACAGCTCAT...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACCGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACACAGGGATCG...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp CTGGCTGGACCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGTGGAGTGAGCTCCAGTaGGGTCATCGACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: LAGPQSAQTAMSQGQQSSWSELQ*GHRHSA
Trigger: AGCTGAATGTCGATGACCCCACTGGAGCTCACTCCA...CGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGGTCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR CCA 90 bp GAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTTGGAGTGAGCTCCAGTaGGGTCATCGACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: ESLPMRNGRSCRCNWSQSWSELQ*GHRHSA
Trigger: AGCTGAATGTCGATGACCCCACTGGAGCTCACTCCA...ACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp CTGGCTGGACCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGGGCATGAGCTGTGATTaGTGCATTGGAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LAGPQSAQTAMSQGQQSSGMSCD*CIGVSS
Trigger: GGAGCTCACTCCAATGCACCAATCACAGCTCATGCC...CGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGGTCCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR CCA 90 bp GAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTGGCATGAGCTGTGATTaGTGCATTGGAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ESLPMRNGRSCRCNWSQSGMSCD*CIGVSS
Trigger: GGAGCTCACTCCAATGCACCAATCACAGCTCATGCC...ACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp AGTATCTCCTCTCTGAGACGAGGTGCCTTCTGGTTGGTCACAGTCTGGCTCGGTCTCGGAGGAAGTACATaGACATATGGCCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SISSLRRGAFWLVTVWLGLGGST*TYGLRL
Trigger: AAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAG...ACCGAGCCAGACTGTGACCAACCAGAAGGCACCTCGTCTCAGAGAGGAGATACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR TCA 90 bp ATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCACTCAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: IPLLTDGPRTVSEGCLPLRSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...GAGTGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGATTGGTGCATTGGAGTaGGCTCCAGTGGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLIGALE*APVGSS
Trigger: CGATGACCCCACTGGAGCTCACTCCAATGCACCAAT...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR TCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACGTTGAGCTAACCACCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDVELTT*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGGTGGTTAGCTCAAC...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR GCA 90 bp GGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTCAGAGGATGTTGAAGTaGCAGATGGTCTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: GSLSSHCSLMVPELSVKAQRMLK*QMVSNS
Trigger: ACTGTTCGAGACCATCTGGCACTTCAACATCCTCTG...AGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR GCA 90 bp CCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGCCTTCACCTGCACTaGCAAGCTGTTTATAAAACC +
Preference number: 4 (lower is better)
Translates to: PSNEKWQELQVQLEPESPGLHLH*QAVYKT
Trigger: GGTTTTATAAACAGCTTGGCAGTGCAGGTGAAGGCC...TGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp TCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCGGCCTTCACCTGCACTaGCAAGCTGTTTATAAAACC +
Preference number: 4 (lower is better)
Translates to: SLPMRNGRSCRCNWSQSPGLHLH*QAVYKT
Trigger: GGTTTTATAAACAGCTTGGCAGTGCAGGTGAAGGCC...GGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp CCACATGGCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCTTGGGAGGCCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: PHGQSRWVPSYSGSLRVSWEAFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGCCTCCCA...AGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR GCA 90 bp TCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGTGGGAGGCCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: SGSLSSHCSLMVPELSVKWEAFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGCCTCCCA...CTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR GCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACTCAGCCTTGAGTCCTTaGCAGGGTAGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDSALSP*QGRLPR
Trigger: CCGAGGCAGCCTACCCTGGCAAGGACTCAAGGCTGA...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp TCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGAATGAGCTGTGATTGGTaGATTGGAGTGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SNEKWQELQVQLEPESPGMSCDW*IGVSSS
Trigger: ACTGGAGCTCACTCCAATGCACCAATCACAGCTCAT...TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp GGAGCAAGTGGACCTGGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCGAGGAATTGTACTTCCCACATaGTCCAAAGTAATAAACCTG +
Preference number: 4 (lower is better)
Translates to: GASGPGCKEMEGVACARGIVLPT*SKVINL
Trigger: CAGGTTTATTACTTTGGACCATGTGGGAAGTACAAT...TCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLEPESRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACACAGGGATCG...GGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp ATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ISMAFISGSLSSHCSLMVVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATCCAGCCCAGCCGGCAGAC...GACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR CCA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SPKASSSAKESFPTVFKSVCRLG*ISHSPR
Trigger: CCGAGGAGAGTGGGAAATCCAGCCCAGCCGGCAGAC...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR TCA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCAAGTTGGGTCCCACCATaGGAACCCCAGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPSWVPP*EPQRML
Trigger: CAACATCCTCTGGGGTTCTCATGGTGGGACCCAACT...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp CTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPMRNGRSCRCNWSQSPQDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...CTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp TCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SLSSHCSLMVPELSVKAVDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...GACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR TCA 90 bp TGTGTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CVLQCNFTGGKEGGRKGRDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...CCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp TCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGCTCGGAGGAAGTACATaGACATATGGCCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SGSLSSHCSLMVPELSVKLGGST*TYGLRL
Trigger: AAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAG...CTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp TTGGTGCATTGGAGTGAGCTCCAGTGGGGTCATCGACATTCAGCTCTCCATTGGCTCGGAGGAAGTACATaGACATATGGCCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LVHWSELQWGHRHSALHWLGGST*TYGLRL
Trigger: AAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAG...CCAATGGAGAGCTGAATGTCGATGACCCCACTGGAGCTCACTCCAATGCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp TCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGAAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: SNEKWQELQVQLEPESPGRSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp GCCAAGCTGGTCACTGCCTTTACTTTACCTTGGAAGCAGGGTGGGGGAGGCACTGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: AKLVTAFTLPWKQGGGGTVQTDL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGATCTGTTTGAAC...AGTGCCTCCCCCACCCTGCTTCCAAGGTAAAGTAAAGGCAGTGACCAGCTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp CCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: PMRNGRSCRCNWSQSPQDVQTDL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGATCTGTTTGAAC...GTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp TCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SLSSHCSLMVPELSVKAVAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...GACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp GGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: GVPSNEKWQELQVQLEPEAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...CTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp GAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: EESLPMRNGRSCRCNWSQAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...CTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR GCA 90 bp GAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTGAGGTGTGTATTCCTTTGTaGCATGGTTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: EKWQELQVQLEPESPGLEVCIPL*HGFSCP
Trigger: CGGACAACTAAAACCATGGCACAAAGGAATACACAC...CTCAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp AGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTGAGGGTGTGTATTCCTTTGTaGCATGGTTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: RNGRSCRCNWSQSPQDLRVCIPL*HGFSCP
Trigger: CGGACAACTAAAACCATGGCACAAAGGAATACACAC...CCTCAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp CTTGTGTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAACAGAGGATGTTGAAGTaGCAGATGGTCTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: LVSYSVTSQEGRREGGREQRMLK*QMVSNS
Trigger: ACTGTTCGAGACCATCTGGCACTTCAACATCCTCTG...TTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGACACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp CCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGTCAGCCTTGAGTCCTTaGCAGGGTAGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PHHQLLDRAFSLVVSLCWSALSP*QGRLPR
Trigger: CCGAGGCAGCCTACCCTGGCAAGGACTCAAGGCTGA...CCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCAGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: VIPLLTDGPRTVSEGCLPAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...TGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR GCA 90 bp GAAAAGGAAGTGAACACTTTCAGAAATCTTGGGGACTTGCTGTTTCCTGCAGTTACCCCCATGGCGGTCTaGGGCCAAGTGAGACGTCAG +
Preference number: 4 (lower is better)
Translates to: EKEVNTFRNLGDLLFPAVTPMAV*GQVRRQ
Trigger: CTGACGTCTCACTTGGCCGCAGACCGCCATGGGGGT...AACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR CCA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCAAAGTAATAAACCTGTaGGAGGCCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGKVINL*EAFTCT
Trigger: AGTGCAGGTGAAGGCCTCCCACAGGTTTATTACTTT...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CCA 90 bp GAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTGAGGAGAAAGCAACTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: EKWQELQVQLEPESPGLEEKATG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTC...CTCAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp TTGGTGCATTGGAGTGAGCTCCAGTGGGGTCATCGACATTCAGCTCTCCATTGGCGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: LVHWSELQWGHRHSALHWRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACACAGGGATCG...CCAATGGAGAGCTGAATGTCGATGACCCCACTGGAGCTCACTCCAATGCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR CCA 90 bp AATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTCGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: NEKWQELQVQLEPESPGLRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACACAGGGATCG...AAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGGGCATGAGCTGTGATTaGTGCATTGGAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLGMSCD*CIGVSS
Trigger: GGAGCTCACTCCAATGCACCAATCACAGCTCATGCC...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
3UTR CAA 72 bp ATTCCTACCAACCCATCATGGGGAAGGCTGGAGTCATaGGCCATCAACCTCTACCTGGACTTCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IPTNPSWGRLES*AINLYLDFLEV
Trigger: GACTTCAAGGAAGTCCAGGTAGAGGTTGATGGCCAATGACTCCAGCCTTCCCCATGATGGGTTGGTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR TCA 90 bp TCAAGGACAGCAAAGCTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTGCAGTTGGGTCCCACCATaGGAACCCCAGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: SRTAKLEETPDSTVSNACSWVPP*EPQRML
Trigger: CAACATCCTCTGGGGTTCTCATGGTGGGACCCAACT...GCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAGCTTTGCTGTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp GAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ESLPMRNGRSCRCNWSQSDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...ACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp GTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAAACCTGTACTCTAAATaGAGTTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: VLQCNFTGGKEGGRKGRTNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAACTTCATTTAGAGTACAGGTT...TGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp CTTGTGTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: LVSYSVTSQEGRREGGRERSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...TTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGACACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPRSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGVQTDL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGATCTGTTTGAAC...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp CCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: PSNEKWQELQVQLEPESPVQTDL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGATCTGTTTGAAC...TGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp ATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCACTCAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: IPLLTDGPRTVSEGCLPLRIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...GAGTGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp GAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTGAGAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: EKWQELQVQLEPESPGLERIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...CTCAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp ATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCACTCGTTAAAGATCTTGGCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: IPLLTDGPRTVSEGCLPLVKDLG*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGCCAAGATCTTTAAC...GAGTGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000205884.2
CDS-3UTR GCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCATCAGCCTTGAGTCCTTaGCAGGGTAGGCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPSALSP*QGRLPR
Trigger: CCGAGGCAGCCTACCCTGGCAAGGACTCAAGGCTGA...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp GTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: VLQCNFTGGKEGGRKGRTISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...TGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp TGTGTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: CVLQCNFTGGKEGGRKGRAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...CCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp CACACAGGGACAGTAGACTGCAGACTGCTCACAGCTTGTGTCCTACAGTGTAACATGAGCTGTGATTGGTaGATTGGAGTGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HTGTVDCRLLTACVLQCNMSCDW*IGVSSS
Trigger: ACTGGAGCTCACTCCAATGCACCAATCACAGCTCAT...GTTACACTGTAGGACACAAGCTGTGAGCAGTCTGCAGTCTACTGTCCCTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp ACAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCAAAGTAATAAACCTGTaGGAGGCCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: TEESLPMRNGRSCRCNWSKVINL*EAFTCT
Trigger: AGTGCAGGTGAAGGCCTCCCACAGGTTTATTACTTT...GCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp GTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCGAGAAAGCAACTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: VPSNEKWQELQVQLEPESEKATG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTC...GGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp CCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGAGAAAGCAACTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: PSNEKWQELQVQLEPESPEKATG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTC...TGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCCACAGAGAGCTTCGATaGGAGTATTCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGHRELR*EYSFWY
Trigger: ATACCAAAAGGAATACTCCCATCGAAGCTCTCTGTG...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000205884.2
CDS-3UTR CCA 90 bp GAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGCACAGAGAGCTTCGATaGGAGTATTCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: EESLPMRNGRSCRCNWSQHRELR*EYSFWY
Trigger: ATACCAAAAGGAATACTCCCATCGAAGCTCTCTGTG...CTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
3UTR CAA 72 bp GTGGGGGAGGCACTTAGTAGGGCAGAGAGTGCCAGGTaGCCACCATTTCCTGGGATAAAGACTTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: VGEALSRAESAR*PPFPGIKTFKF
Trigger: AAACTTAAAAGTCTTTATCCCAGGAAATGGTGGCAACCTGGCACTCTCTGCCCTACTAAGTGCCTCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp GTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAAAGTTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VLQCNFTGGKEGGRKGRTKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAACTT...TGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp CTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGAAGTTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LPMRNGRSCRCNWSQSPQKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAACTT...CTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAAACCTGTACTCTAAATaGAGTTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAACTTCATTTAGAGTACAGGTT...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp CTTGTGTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAAACCTGTACTCTAAATaGAGTTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: LVSYSVTSQEGRREGGRENLYSK*SCGARD
Trigger: ATCACGTGCTCCACAACTTCATTTAGAGTACAGGTT...TTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGACACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp ACAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: TEESLPMRNGRSCRCNWSVQTDL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGATCTGTTTGAAC...GCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGRIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp GGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: GSLSSHCSLMVPELSVKARIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...AGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp CCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: PSNEKWQELQVQLEPESPRIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...TGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp TTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: FRFTVIPLLTDGPRTVSEAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...TTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp TTGGTTGAGCTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LVELTTFISGSLSSHCSLKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...CAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAGCTCAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTTCTGATGATGTAGTCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GSLSSHCSLMVPELSVKASDDVV*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGACTACATCATCAGA...AGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR TCA 90 bp GAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGTCTGATGATGTAGTCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: EESLPMRNGRSCRCNWSQSDDVV*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGACTACATCATCAGA...CTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTGTGAGACGTCAGGTATaGGGTATTGGTCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SPKASSSAKESFPTVFKSVRRQV*GIGLPA
Trigger: AGCCGGCAGACCAATACCTCATACCTGACGTCTCAC...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR TCA 90 bp AGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGCGGTCTGCGGCCAAGTaGGACGTCAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: SLISMAFISGSLSSHCSLRSAAK*DVRYEV
Trigger: TACCTCATACCTGACGTCTCACTTGGCCGCAGACCG...CAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR TCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCACGGTCTGCGGCCAAGTaGGACGTCAGGTATGAGGTA +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPRSAAK*DVRYEV
Trigger: TACCTCATACCTGACGTCTCACTTGGCCGCAGACCG...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR TCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTGCTAACCACCTGTACTaGACCCCCATGGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATANHLY*TPMAVC
Trigger: GCAGACCGCCATGGGGGTTCAGTACAGGTGGTTAGC...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR TCA 90 bp TCAAGGACAGCAAAGCTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTGCCTTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SRTAKLEETPDSTVSNACLRHEL*LVHWSE
Trigger: CTCACTCCAATGCACCAATCACAGCTCATGCCGAAG...GCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAGCTTTGCTGTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCGTTAAAGATCTTGGCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGVKDLG*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGCCAAGATCTTTAAC...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000205884.2
CDS-3UTR GCA 90 bp CCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGAGGAAACTCGGCCTTCACCTGCACTaGCAAGCTGTTTATAAAACC +
Preference number: 4 (lower is better)
Translates to: PQSAQTAMSQGQQSSRKLGLHLH*QAVYKT
Trigger: GGTTTTATAAACAGCTTGGCAGTGCAGGTGAAGGCC...GAGTTTCCTCGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR GCA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCATGGGAGGCCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPWEAFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGCCTCCCA...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp ACAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: TEESLPMRNGRSCRCNWSISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...GCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR GCA 90 bp GGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTTCGAGTTATTGCAGATaGACCAGAATCTACATGAAC +
Preference number: 4 (lower is better)
Translates to: GSLSSHCSLMVPELSVKASSYCR*TRIYMN
Trigger: GTTCATGTAGATTCTGGTGCATCTGCAATAACTCGA...AGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR GCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR GCA 90 bp TTGGTGCATTGGAGTGAGCTCCAGTGGGGTCATCGACATTCAGCTCTCCATTGGGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: LVHWSELQWGHRHSALHWAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...CCAATGGAGAGCTGAATGTCGATGACCCCACTGGAGCTCACTCCAATGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR GCA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGATGAGCTGTGATTGGTaGATTGGAGTGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLMSCDW*IGVSSS
Trigger: ACTGGAGCTCACTCCAATGCACCAATCACAGCTCAT...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR CCA 90 bp CCACATGGCCAATCCAGATGGGTACCTAGTTATTCTGGCTCCCTGAGGGTCTCTGAGAAAGCAACTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: PHGQSRWVPSYSGSLRVSEKATG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTC...AGAGACCCTCAGGGAGCCAGAATAACTAGGTACCCATCTGGATTGGCCATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR CCA 90 bp TCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGAGAAAGCAACTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: SGSLSSHCSLMVPELSVKEKATG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTC...CTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CCA 90 bp AGTATCTCCTCTCTGAGACGAGGTGCCTTCTGGTTGGTCACAGTCTGGCTCGGTATTCGAGAAAGCAACTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: SISSLRRGAFWLVTVWLGIRESN*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAAT...ACCGAGCCAGACTGTGACCAACCAGAAGGCACCTCGTCTCAGAGAGGAGATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR CCA 90 bp AATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTCACAGAGAGCTTCGATaGGAGTATTCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: NEKWQELQVQLEPESPGLHRELR*EYSFWY
Trigger: ATACCAAAAGGAATACTCCCATCGAAGCTCTCTGTG...AAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp TTGGTGCATTGGAGTGAGCTCCAGTGGGGTCATCGACATTCAGCTCTCCATTGGCACAGAGAGCTTCGATaGGAGTATTCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LVHWSELQWGHRHSALHWHRELR*EYSFWY
Trigger: ATACCAAAAGGAATACTCCCATCGAAGCTCTCTGTG...CCAATGGAGAGCTGAATGTCGATGACCCCACTGGAGCTCACTCCAATGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR CCA 90 bp ACAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCACAGAGAGCTTCGATaGGAGTATTCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: TEESLPMRNGRSCRCNWSHRELR*EYSFWY
Trigger: ATACCAAAAGGAATACTCCCATCGAAGCTCTCTGTG...GCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp ATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCTATTGGTCTGCCGGCTaGGCTGGATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: ISMAFISGSLSSHCSLMVYWSAG*AGFPTL
Trigger: GAGAGTGGGAAATCCAGCCCAGCCGGCAGACCAATA...GACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR CCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACTGGAGTGAGCTCCAGTaGGGTCATCGACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDWSELQ*GHRHSA
Trigger: AGCTGAATGTCGATGACCCCACTGGAGCTCACTCCA...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCAACCCCAGAGGATGTTaGAGTGCCAGATGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: ISMAFISGSLSSHCSLMVNPRGC*SARWSR
Trigger: TCGAGACCATCTGGCACTTCAACATCCTCTGGGGTT...GACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR TCA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTAACCCCAGAGGATGTTaGAGTGCCAGATGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: SPKASSSAKESFPTVFKSNPRGC*SARWSR
Trigger: TCGAGACCATCTGGCACTTCAACATCCTCTGGGGTT...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GAAAAGGAAGTGAACACTTTCAGAAATCTTGGGGACTTGCTGTTTCCTGCAGTTAGTTGGGTCCCACCATaGGAACCCCAGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: EKEVNTFRNLGDLLFPAVSWVPP*EPQRML
Trigger: CAACATCCTCTGGGGTTCTCATGGTGGGACCCAACT...AACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp CAGACTCTTTCCATCAAAAATGTCCTCTGGACCCACATTTTCTCTGAATGGCTTAGTTGGGTCCCACCATaGGAACCCCAGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: QTLSIKNVLWTHIFSEWLSWVPP*EPQRML
Trigger: CAACATCCTCTGGGGTTCTCATGGTGGGACCCAACT...AAGCCATTCAGAGAAAATGTGGGTCCAGAGGACATTTTTGATGGAAAGAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR TCA 90 bp TGCTCTTTGCCTAGATGTGTGTTGATAGACATGTATCTCGCAGTTCCAGTCAAAAGTTGGGTCCCACCATaGGAACCCCAGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: CSLPRCVLIDMYLAVPVKSWVPP*EPQRML
Trigger: CAACATCCTCTGGGGTTCTCATGGTGGGACCCAACT...TTTGACTGGAACTGCGAGATACATGTCTATCAACACACATCTAGGCAAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208011.2
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAAAGTTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAACTT...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp TTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAAACCTGTACTCTAAATaGAGTTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: FRFTVIPLLTDGPRTVSENLYSK*SCGARD
Trigger: ATCACGTGCTCCACAACTTCATTTAGAGTACAGGTT...TTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR TCA 90 bp TTGGTTTGGATCTCTACCCTCCCCCACAGAGGAGTCCCTTCCAATGAGAAATGGAACCTGTACTCTAAATaGAGTTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: LVWISTLPHRGVPSNEKWNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAACTTCATTTAGAGTACAGGTT...CCATTTCTCATTGGAAGGGACTCCTCTGTGGGGGAGGGTAGAGATCCAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp TTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: FRFTVIPLLTDGPRTVSEVQTDL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGATCTGTTTGAAC...TTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPRIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp CCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGAGGAAACTCGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: PQSAQTAMSQGQQSSRKLAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...GAGTTTCCTCGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp TTCCTTTCCTTTGCTCAGAACCACAGGCATATTTTGCTACAGCCCGGAGCAAGGGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: FLSFAQNHRHILLQPGARAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...CCTTGCTCCGGGCTGTAGCAAAATATGCCTGTGGTTCTGAGCAAAGGAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp CCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PHHQLLDRAFSLVVSLCWKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...CCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp ATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ISMAFISGSLSSHCSLMVKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...GACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
CDS-3UTR TCA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SPKASSSAKESFPTVFKSKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp CTGGCTGGACCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGTCTGATGATGTAGTCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LAGPQSAQTAMSQGQQSSSDDVV*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGACTACATCATCAGA...CGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGGTCCAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR TCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCATCTGATGATGTAGTCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPSDDVV*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGACTACATCATCAGA...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR TCA 90 bp CAAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACGTGAGACGTCAGGTATaGGGTATTGGTCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QVLFQWPLFQVHCHPTAHVRRQV*GIGLPA
Trigger: AGCCGGCAGACCAATACCTCATACCTGACGTCTCAC...GTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR TCA 90 bp CCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGCTTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PHHQLLDRAFSLVVSLCWLRHEL*LVHWSE
Trigger: CTCACTCCAATGCACCAATCACAGCTCATGCCGAAG...CCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGGTTGAGCTAACCACCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLVELTT*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGGTGGTTAGCTCAAC...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR GCA 90 bp TCAAGGACAGCAAAGCTCGAGGAAACTCCAGATAGTACAGTATCAAATGCCTGCTCATCTCGCCGGCTTTaGTCTTTGCCTAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: SRTAKLEETPDSTVSNACSSRRL*SLPRCV
Trigger: CACACATCTAGGCAAAGAGCAAAGCCGGCGAGATGA...GCAGGCATTTGATACTGTACTATCTGGAGTTTCCTCGAGCTTTGCTGTCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR GCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACTCATCTCGCCGGCTTTaGTCTTTGCCTAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDSSRRL*SLPRCV
Trigger: CACACATCTAGGCAAAGAGCAAAGCCGGCGAGATGA...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp TTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: FRFTVIPLLTDGPRTVSEISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...TTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000205884.2
CDS-3UTR GCA 90 bp CAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAAAGGAATCGAGTTATTGCAGATaGACCAGAATCTACATGAAC +
Preference number: 4 (lower is better)
Translates to: QCNFTGGKEGGRKGRTKESSYCR*TRIYMN
Trigger: GTTCATGTAGATTCTGGTGCATCTGCAATAACTCGA...TTCCTTTGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTTCGAGTTATTGCAGATaGACCAGAATCTACATGAAC +
Preference number: 4 (lower is better)
Translates to: ESLPMRNGRSCRCNWSQSSSYCR*TRIYMN
Trigger: GTTCATGTAGATTCTGGTGCATCTGCAATAACTCGA...ACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR GCA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCATCGAGTTATTGCAGATaGACCAGAATCTACATGAAC +
Preference number: 4 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPSSYCR*TRIYMN
Trigger: GTTCATGTAGATTCTGGTGCATCTGCAATAACTCGA...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CCA 90 bp GAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTATTCGAGAAAGCAACTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: ESLPMRNGRSCRCNWSQSIRESN*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAAT...ACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp CACACAGGGACAGTAGACTGCAGACTGCTCACAGCTTGTGTCCTACAGTGTAACCACAGAGAGCTTCGATaGGAGTATTCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: HTGTVDCRLLTACVLQCNHRELR*EYSFWY
Trigger: ATACCAAAAGGAATACTCCCATCGAAGCTCTCTGTG...GTTACACTGTAGGACACAAGCTGTGAGCAGTCTGCAGTCTACTGTCCCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp CTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGCTACACAGAGAGCTTCGATaGGAGTATTCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LTFSACSSPMYHVLSLLLHRELR*EYSFWY
Trigger: ATACCAAAAGGAATACTCCCATCGAAGCTCTCTGTG...TAGCAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR CCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCATATTGGTCTGCCGGCTaGGCTGGATTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPYWSAG*AGFPTL
Trigger: GAGAGTGGGAAATCCAGCCCAGCCGGCAGACCAATA...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR CCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCATCAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPSGMRY*SAGWAG
Trigger: TCCAGCCCAGCCGGCAGACCAATACCTCATACCTGA...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR TCA 90 bp AAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTAGTTGGGTCCCACCATaGGAACCCCAGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: KSYFNGLYFRFTVIPLLTSWVPP*EPQRML
Trigger: CAACATCCTCTGGGGTTCTCATGGTGGGACCCAACT...AGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR TCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTAGTTGGGTCCCACCATaGGAACCCCAGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATSWVPP*EPQRML
Trigger: CAACATCCTCTGGGGTTCTCATGGTGGGACCCAACT...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCAGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp TTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: FNGLYFRFTVIPLLTDGPRSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...GGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
CDS-3UTR TCA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCAAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPRSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GCTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: ANHLYFRFTVIPLLTDGPVQTDL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGATCTGTTTGAAC...GGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp CTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGCTAAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: LTFSACSSPMYHVLSLLLRIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...TAGCAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR TCA 90 bp CAGACTCTTTCCATCAAAAATGTCCTCTGGACCCACATTTTCTCTGAATGGCTTAAGAGGCTGTTGTTGTaGTGGCCGATCCCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QTLSIKNVLWTHIFSEWLKRLLL*WPIPVC
Trigger: ACACACAGGGATCGGCCATCACAACAACAGCCTCTT...AAGCCATTCAGAGAAAATGTGGGTCCAGAGGACATTTTTGATGGAAAGAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR TCA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTATTGGTGCATTGGAGTaGGCTCCAGTGGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSIGALE*APVGSS
Trigger: CGATGACCCCACTGGAGCTCACTCCAATGCACCAAT...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCACTTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPLRHEL*LVHWSE
Trigger: CTCACTCCAATGCACCAATCACAGCTCATGCCGAAG...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAACCTCCACTTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAAGTGGAGGT...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp AGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGAGAGGGTTGAGGATGGTGCAATGGGAGGCCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: RAFSLVVSLCWRGLRMVQWEAFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGCCTCCCA...TTGCACCATCCTCAACCCTCTCCAGCATAAAGAAACTACTAAGCTAAAGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTTCATCTCGCCGGCTTTaGTCTTTGCCTAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: SPKASSSAKESFPTVFKSSSRRL*SLPRCV
Trigger: CACACATCTAGGCAAAGAGCAAAGCCGGCGAGATGA...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp TTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAATCGAGTTATTGCAGATaGACCAGAATCTACATGAAC +
Preference number: 4 (lower is better)
Translates to: FRFTVIPLLTDGPRTVSESSYCR*TRIYMN
Trigger: GTTCATGTAGATTCTGGTGCATCTGCAATAACTCGA...TTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR GCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACATGAGCTGTGATTGGTaGATTGGAGTGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDMSCDW*IGVSSS
Trigger: ACTGGAGCTCACTCCAATGCACCAATCACAGCTCAT...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp CAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAAAGGAAATTGTACTTCCCACATaGTCCAAAGTAATAAACCTG +
Preference number: 4 (lower is better)
Translates to: QCNFTGGKEGGRKGRTKEIVLPT*SKVINL
Trigger: CAGGTTTATTACTTTGGACCATGTGGGAAGTACAAT...TTCCTTTGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGGCATGAGCTGTGATTaGTGCATTGGAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPGMSCD*CIGVSS
Trigger: GGAGCTCACTCCAATGCACCAATCACAGCTCATGCC...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
3UTR CAA 72 bp ACCTTTGCTACAAAACCCAAATACCTAGTAAGGGATTaGTGGGTGCTGGAGGGTGCCAACAGTGCATTAGGA +
Preference number: 4 (lower is better)
Translates to: TFATKPKYLVRD*WVLEGANSALG
Trigger: TCCTAATGCACTGTTGGCACCCTCCAGCACCCACAAATCCCTTACTAGGTATTTGGGTTTTGTAGCAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp ATAAGATTCTTTGAGTGTACATACTCCATTCGAGAAAGCAACTGGATGGCTATCAGTTGGGTCCCACCATaGGAACCCCAGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: IRFFECTYSIRESNWMAISWVPP*EPQRML
Trigger: CAACATCCTCTGGGGTTCTCATGGTGGGACCCAACT...GATAGCCATCCAGTTGCTTTCTCGAATGGAGTATGTACACTCAAAGAATCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207167.2
ENSMUST00000208011.2
CDS-3UTR TCA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGAAGTTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAACTT...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR TCA 90 bp TTGGTTGAGCTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: LVELTTFISGSLSSHCSLRSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...CAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAGCTCAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp CCTCAGTCTGCTCAAACTGCAATGTCTCAAGGACAGCAAAGCTCGAGGAAACTCAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: PQSAQTAMSQGQQSSRKLRIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...GAGTTTCCTCGAGCTTTGCTGTCCTTGAGACATTGCAGTTTGAGCAGACTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR TCA 90 bp TTGGTTGAGCTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LVELTTFISGSLSSHCSLAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...CAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAGCTCAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR TCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTTCGGCATGAGCTGTaGTTGGTGCATTGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATLRHEL*LVHWSE
Trigger: CTCACTCCAATGCACCAATCACAGCTCATGCCGAAG...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTACCTCCACTTCGGCATaGGCTGTGATTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATTSTSA*AVIGAL
Trigger: CAATGCACCAATCACAGCTCATGCCGAAGTGGAGGT...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GTGAATGACACCTTCACTGTAAACAATGGGAAGAGAGTCAACCAGATAGCCCAACAGCTCTCCATTGGTTaGGCTAACCACCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: VNDTFTVNNGKRVNQIAQQLSIG*ANHLIS
Trigger: AGAAATCAGGTGGTTAGCTCAACCAATGGAGAGCTG...TTGGGCTATCTGGTTGACTCTCTTCCCATTGTTTACAGTGAAGGTGTCATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR GCA 90 bp CCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGCAGAGGATGTTGAAGTaGCAGATGGTCTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: PHHQLLDRAFSLVVSLCWQRMLK*QMVSNS
Trigger: ACTGTTCGAGACCATCTGGCACTTCAACATCCTCTG...CCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTGGCCTTCACCTGCACTaGCAAGCTGTTTATAAAACC +
Preference number: 4 (lower is better)
Translates to: SPKASSSAKESFPTVFKSGLHLH*QAVYKT
Trigger: GGTTTTATAAACAGCTTGGCAGTGCAGGTGAAGGCC...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTATGAGCTGTGATTGGTaGATTGGAGTGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SPKASSSAKESFPTVFKSMSCDW*IGVSSS
Trigger: ACTGGAGCTCACTCCAATGCACCAATCACAGCTCAT...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp TTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAATTGTACTTCCCACATaGTCCAAAGTAATAAACCTG +
Preference number: 4 (lower is better)
Translates to: FRFTVIPLLTDGPRTVSEIVLPT*SKVINL
Trigger: CAGGTTTATTACTTTGGACCATGTGGGAAGTACAAT...TTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CCA 90 bp CTATCTTCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTCGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: LSSWPHHQLLDRAFSLVVRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACACAGGGATCG...AACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGAAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTTGGAGTGAGCTCCAGTaGGGTCATCGACATTCAGCT +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATWSELQ*GHRHSA
Trigger: AGCTGAATGTCGATGACCCCACTGGAGCTCACTCCA...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGGCATGAGCTGTGATTaGTGCATTGGAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSGMSCD*CIGVSS
Trigger: GGAGCTCACTCCAATGCACCAATCACAGCTCATGCC...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
3UTR CAA 72 bp TCATCTCGCCGGCTTTGCTCTTTGCCTAGATGTGTGTaGATAGACATGTATCTCGCAGTTCCAGTCAAACTT +
Preference number: 4 (lower is better)
Translates to: SSRRLCSLPRCV*IDMYLAVPVKL
Trigger: AAGTTTGACTGGAACTGCGAGATACATGTCTATCAACACACATCTAGGCAAAGAGCAAAGCCGGCGAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208011.2
CDS-3UTR TCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDVQTDL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGATCTGTTTGAAC...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCATCTGATGATGTAGTCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPSDDVV*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGACTACATCATCAGA...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR TCA 90 bp GAAAAGGAAGTGAACACTTTCAGAAATCTTGGGGACTTGCTGTTTCCTGCAGTTCAGCTCTCCATTGGTTaGGCTAACCACCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: EKEVNTFRNLGDLLFPAVQLSIG*ANHLIS
Trigger: AGAAATCAGGTGGTTAGCTCAACCAATGGAGAGCTG...AACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117849.3
CDS-3UTR GCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACGTGTGTATTCCTTTGTaGCATGGTTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDVCIPL*HGFSCP
Trigger: CGGACAACTAAAACCATGGCACAAAGGAATACACAC...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCACAGAGGATGTTGAAGTaGCAGATGGTCTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPQRMLK*QMVSNS
Trigger: ACTGTTCGAGACCATCTGGCACTTCAACATCCTCTG...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp AGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGGGCCTTCACCTGCACTaGCAAGCTGTTTATAAAACC +
Preference number: 4 (lower is better)
Translates to: SLISMAFISGSLSSHCSLGLHLH*QAVYKT
Trigger: GGTTTTATAAACAGCTTGGCAGTGCAGGTGAAGGCC...CAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR GCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGGCCTTCACCTGCACTaGCAAGCTGTTTATAAAACC +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPGLHLH*QAVYKT
Trigger: GGTTTTATAAACAGCTTGGCAGTGCAGGTGAAGGCC...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp TCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTAGGCCTTCACCTGCACTaGCAAGCTGTTTATAAAACC +
Preference number: 4 (lower is better)
Translates to: SWPHHQLLDRAFSLVVSLGLHLH*QAVYKT
Trigger: GGTTTTATAAACAGCTTGGCAGTGCAGGTGAAGGCC...TAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTTGGGAGGCCTTCACCTaGACTGCCAAGCTGTTTATA +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATWEAFT*TAKLFI
Trigger: TATAAACAGCTTGGCAGTGCAGGTGAAGGCCTCCCA...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp AAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTTCATCTCGCCGGCTTTaGTCTTTGCCTAGATGTGTG +
Preference number: 4 (lower is better)
Translates to: KSYFNGLYFRFTVIPLLTSSRRL*SLPRCV
Trigger: CACACATCTAGGCAAAGAGCAAAGCCGGCGAGATGA...AGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR GCA 90 bp TTGGTTGAGCTAACCACCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LVELTTFISGSLSSHCSLISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...CAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGTGGTTAGCTCAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205884.2
CDS-3UTR GCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp GTGAATGACACCTTCACTGTAAACAATGGGAAGAGAGTCAACCAGATAGCCCAAAAAGTAATAAACCTGTaGGAGGCCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: VNDTFTVNNGKRVNQIAQKVINL*EAFTCT
Trigger: AGTGCAGGTGAAGGCCTCCCACAGGTTTATTACTTT...TTGGGCTATCTGGTTGACTCTCTTCCCATTGTTTACAGTGAAGGTGTCATTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CCA 90 bp TTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCATTCGAGAAAGCAACTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: FNGLYFRFTVIPLLTDGPIRESN*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAAT...GGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CCA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCAATTCGAGAAAGCAACTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPIRESN*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAAT...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp CAAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACCGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: QVLFQWPLFQVHCHPTAHRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACACAGGGATCG...GTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
CDS-3UTR TCA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTAACCTGTACTCTAAATaGAGTTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: SPKASSSAKESFPTVFKSNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAACTTCATTTAGAGTACAGGTT...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GAGTGTACATACTCCATTCGAGAAAGCAACTGGATGGCTATCATTAACACCGTCAACCTGTACTCTAAATaGAGTTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: ECTYSIRESNWMAIINTVNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAACTTCATTTAGAGTACAGGTT...GACGGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAATGGAGTATGTACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207167.2
CDS-3UTR TCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTCGGAGGAAGTACATaGACATATGGCCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATLGGST*TYGLRL
Trigger: AAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAG...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp TCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTAAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: SWPHHQLLDRAFSLVVSLRSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...TAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR TCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCAGCTCTCCATTGGTTaGGCTAACCACCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATQLSIG*ANHLIS
Trigger: AGAAATCAGGTGGTTAGCTCAACCAATGGAGAGCTG...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp ATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCGTGTGTATTCCTTTGTaGCATGGTTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: ISMAFISGSLSSHCSLMVVCIPL*HGFSCP
Trigger: CGGACAACTAAAACCATGGCACAAAGGAATACACAC...GACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR GCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACTCGAGTTATTGCAGATaGACCAGAATCTACATGAAC +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDSSYCR*TRIYMN
Trigger: GTTCATGTAGATTCTGGTGCATCTGCAATAACTCGA...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp GTGAATGACACCTTCACTGTAAACAATGGGAAGAGAGTCAACCAGATAGCCCAAGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: VNDTFTVNNGKRVNQIAQAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...TTGGGCTATCTGGTTGACTCTCTTCCCATTGTTTACAGTGAAGGTGTCATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: SPKASSSAKESFPTVFKSAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAAAAGTAATAAACCTGTaGGAGGCCTTCACCTGCACT +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPKVINL*EAFTCT
Trigger: AGTGCAGGTGAAGGCCTCCCACAGGTTTATTACTTT...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACATTCGAGAAAGCAACTaGATGGCTATCATTAACACC +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDIRESN*MAIINT
Trigger: GGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAAT...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp AAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTCGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: KSYFNGLYFRFTVIPLLTRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACACAGGGATCG...AGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
CDS-3UTR CCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATRSLCV*LSRVIA
Trigger: TGCAATAACTCGAGAAAGCCACACACACAGGGATCG...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
3UTR CAA 72 bp GAAAAGGAAGTGAACACTTTCAGAAATCTTGGGGACTaGCTGTTTCCTGCAGTTTGTTCCAATCGAAATGGG +
Preference number: 4 (lower is better)
Translates to: EKEVNTFRNLGD*LFPAVCSNRNG
Trigger: CCCATTTCGATTGGAACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
3UTR CAA 72 bp TGGAGTCATTGGCCATCAACCTCTACCTGGACTTCCTaGAAGTCTGCAAAATCAAGAAATCCAGAGATAAGT +
Preference number: 4 (lower is better)
Translates to: WSHWPSTSTWTS*KSAKSRNPEIS
Trigger: ACTTATCTCTGGATTTCTTGATTTTGCAGACTTCAAGGAAGTCCAGGTAGAGGTTGATGGCCAATGACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR TCA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATGTGTGTTGATAGACATGTATCTCGCAGTTCCAGTCAAACTTTTGTGCTCTCTGATTTTTACCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: MCVDRHVSRSSSQTFVLSDFYLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATC...AGAGAGCACAAAAGTTTGACTGGAACTGCGAGATACATGTCTATCAACACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208011.2
CDS-3UTR TCA 90 bp ATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCAAGTTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: ISMAFISGSLSSHCSLMVKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAACTT...GACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR TCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAAACCTGTACTCTAAATaGAGTTGTGGAGCACGTGAT +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPNLYSK*SCGARD
Trigger: ATCACGTGCTCCACAACTTCATTTAGAGTACAGGTT...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp AAACTTACAAACTCACAGAAGGGCCATGGTGGCCTCTTCCTTTTCATAATCAAAAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: KLTNSQKGHGGLFLFIIKRSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...TTTGATTATGAAAAGGAAGAGGCCACCATGGCCCTTCTGTGAGTTTGTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR TCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTAGAAGTCTAATCGCCTaGCATATCGAAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATRSLIA*HIEGRL
Trigger: CAACCTACCTTCGATATGTCAGGCGATTAGACTTCT...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACT +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPVQTDL*RGSVNT
Trigger: AGTATTTACGGACCCTCTTCACAGATCTGTTTGAAC...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGTTGAGCTAACCACCTaGTTTCTAAGAGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSVELTT*FLRGCC
Trigger: ACAACAGCCTCTTAGAAATCAGGTGGTTAGCTCAAC...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATAAGATTCTTTGAGTGTACATACTCCATTCGAGAAAGCAACTGGATGGCTATCTATTGGTTCCTAATCTaGGCTCTCCGAAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: IRFFECTYSIRESNWMAIYWFLI*ALRSSH
Trigger: GTGGGAACTTCGGAGAGCTCAGATTAGGAACCAATA...GATAGCCATCCAGTTGCTTTCTCGAATGGAGTATGTACACTCAAAGAATCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207167.2
CDS-3UTR GCA 90 bp ATAAGATTCTTTGAGTGTACATACTCCATTCGAGAAAGCAACTGGATGGCTATCCAGAGGATGTTGAAGTaGCAGATGGTCTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: IRFFECTYSIRESNWMAIQRMLK*QMVSNS
Trigger: ACTGTTCGAGACCATCTGGCACTTCAACATCCTCTG...GATAGCCATCCAGTTGCTTTCTCGAATGGAGTATGTACACTCAAAGAATCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207167.2
ENSMUST00000208011.2
CDS-3UTR CCA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACATTGTACTTCCCACATaGTCCAAAGTAATAAACCTG +
Preference number: 4 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDIVLPT*SKVINL
Trigger: CAGGTTTATTACTTTGGACCATGTGGGAAGTACAAT...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGAGAAAGCAACTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPEKATG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTC...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCACACAGAGAGCTTCGATaGGAGTATTCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPHRELR*EYSFWY
Trigger: ATACCAAAAGGAATACTCCCATCGAAGCTCTCTGTG...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPRIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp CACAGTCCAATAGAACAGGTAAGGTGCACAAACTCTGCTTCATTTGATACTAAAGCACCAGAATCTACATaGACTGATCCTACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: HSPIEQVRCTNSASFDTKAPEST*TDPTGV
Trigger: TACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGC...TTTAGTATCAAATGAAGCAGAGTTTGTGCACCTTACCTGTTCTATTGGACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR TCA 90 bp GCTATCATTAACACCGTCTTCAAAGTAAACGTTCGGTCACAGAGGTCAAACAAGAAGTTGTGGAGCACGTaGTTTTATTGGTTCCTAATC +
Preference number: 4 (lower is better)
Translates to: AIINTVFKVNVRSQRSNKKLWST*FYWFLI
Trigger: GATTAGGAACCAATAAAATCACGTGCTCCACAACTT...CTTGTTTGACCTCTGTGACCGAACGTTTACTTTGAAGACGGTGTTAATGATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207167.2
CDS-3UTR GCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTGTGTGTATTCCTTTGTaGCATGGTTTTAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATVCIPL*HGFSCP
Trigger: CGGACAACTAAAACCATGGCACAAAGGAATACACAC...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTATATCGAAGGTAGGTTaGCATCTCCTCTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSISKVG*HLLWKV
Trigger: AACTTTCCAGAGGAGATGGCAACCTACCTTCGATAT...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCATCGAGTTATTGCAGATaGACCAGAATCTACATGAAC +
Preference number: 4 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPSSYCR*TRIYMN
Trigger: GTTCATGTAGATTCTGGTGCATCTGCAATAACTCGA...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp TCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATCGAGTTATTGCAGATaGACCAGAATCTACATGAAC +
Preference number: 4 (lower is better)
Translates to: SWPHHQLLDRAFSLVVSLSSYCR*TRIYMN
Trigger: GTTCATGTAGATTCTGGTGCATCTGCAATAACTCGA...TAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR GCA 90 bp AAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: KSYFNGLYFRFTVIPLLTAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...AGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
CDS-3UTR CCA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGAAAGCAACTGGATaGCTATCATTAACACCGTCT +
Preference number: 4 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSEKATG*LSLTPS
Trigger: AGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTC...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CCA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTCACAGAGAGCTTCGATaGGAGTATTCCTTTTGGTAT +
Preference number: 4 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSHRELR*EYSFWY
Trigger: ATACCAAAAGGAATACTCCCATCGAAGCTCTCTGTG...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTAAGTTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VYLKITFVLSRCPMKWATKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAACTT...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTAAGTTGTGGAGCACGTaGTTTTATTGGTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSKLWST*FYWFQF
Trigger: AAACTGGAACCAATAAAATCACGTGCTCCACAACTT...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR TCA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTAGAATCTACATGAACTaGTCCTACTGGAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSRIYMN*SYWSRN
Trigger: ATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCT...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR GCA 90 bp CACAGTCCAATAGAACAGGTAAGGTGCACAAACTCTGCTTCATTTGATACTAAAGCTTTCTCGAGTTATTaGAGATGCACCAGAATCTAC +
Preference number: 4 (lower is better)
Translates to: HSPIEQVRCTNSASFDTKAFSSY*RCTRIY
Trigger: GTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGC...TTTAGTATCAAATGAAGCAGAGTTTGTGCACCTTACCTGTTCTATTGGACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
CDS-3UTR CCA 90 bp TCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTAATTGTACTTCCCACATaGTCCAAAGTAATAAACCTG +
Preference number: 4 (lower is better)
Translates to: SWPHHQLLDRAFSLVVSLIVLPT*SKVINL
Trigger: CAGGTTTATTACTTTGGACCATGTGGGAAGTACAAT...TAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
3UTR CAA 72 bp AAAACAAAGTTGCCTGATAAACAAAGGAATTCTAATTaGATTCCTACCAACCCATCATGGGGAAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KTKLPDKQRNSN*IPTNPSWGRLE
Trigger: CTCCAGCCTTCCCCATGATGGGTTGGTAGGAATCAAATTAGAATTCCTTTGTTTATCAGGCAACTTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR CCA 90 bp ATAAGATTCTTTGAGTGTACATACTCCATTCGAGAAAGCAACTGGATGGCTATCATTGTACTTCCCACATaGTCCAAAGTAATAAACCTG +
Preference number: 4 (lower is better)
Translates to: IRFFECTYSIRESNWMAIIVLPT*SKVINL
Trigger: CAGGTTTATTACTTTGGACCATGTGGGAAGTACAAT...GATAGCCATCCAGTTGCTTTCTCGAATGGAGTATGTACACTCAAAGAATCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208011.2
CDS CCA 90 bp CCCCATGGCGGTCTGCGGCCAAGTGAGACGTCAGGTATGAGGTATTaGTCTGCCGGCTGGGCTGGATTTCCCACTCTCCTCGGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: PHGGLRPSETSGMRY*SAGWAGFPTLLGAL
Trigger: CAGAGCGCCGAGGAGAGTGGGAAATCCAGCCCAGCCGGCAGACCAATACCTCATACCTGACGTCTCACTTGGCCGCAGACCGCCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000136773.3
ENSMUST00000206048.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CAA 90 bp GACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGCTTGCCAACCCTGAAGTaGGGTCCCACCATGAGAACC +
Preference number: 5 (lower is better)
Translates to: DPLRAQTEGIATGPLGPGLPTLK*GPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAA...GCCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp GGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGCCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: GPAQSSDRGDCHWPTRPWPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGG...CCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS TCA 90 bp GAGCTAACCACCTGTACTGAACCCCCATGGCGGTCTGCGGCCAAGTaGGACGTCAGGTATGAGGTATTGGTCTGCCGGCTGGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: ELTTCTEPPWRSAAK*DVRYEVLVCRLGWI
Trigger: AATCCAGCCCAGCCGGCAGACCAATACCTCATACCTGACGTCTCACTTGGCCGCAGACCGCCATGGGGGTTCAGTACAGGTGGTTAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CAA 90 bp GTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCAGTCAGGTATGAGGTATaGGTCTGCCGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: VIPLLTDGPRTVSEGCLPVRYEV*VCRLGW
Trigger: CCAGCCCAGCCGGCAGACCAATACCTCATACCTGAC...TGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR CAA 90 bp GGACCCGCTCAGAGCTCAGACAGAGGGGATTGCCACTGGCCCACTCGGCCCTGGTTGCCTAGATGTGTGTaGATAGACATGTATCTCGCA +
Preference number: 5 (lower is better)
Translates to: GPAQSSDRGDCHWPTRPWLPRCV*IDMYLA
Trigger: TGCGAGATACATGTCTATCAACACACATCTAGGCAA...CCAGGGCCGAGTGGGCCAGTGGCAATCCCCTCTGTCTGAGCTCTGAGCGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp GGTCACAGTCTGGCTCGGTGCTCATCCCACGGGCTCAGGAGCTGGGCTCAAGCTACATTCAGCTCTCCATaGGTTGAGCTAACCACCTGT +
Preference number: 5 (lower is better)
Translates to: GHSLARCSSHGLRSWAQATFSSP*VELTTC
Trigger: ACAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGT...AGCTTGAGCCCAGCTCCTGAGCCCGTGGGATGAGCACCGAGCCAGACTGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS TCA 90 bp AAAGATCTTGGCTGTACTGAACCCCCATGGCGGTCTGCGGCCAAGTaGGACGTCAGGTATGAGGTATTGGTCTGCCGGCTGGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: KDLGCTEPPWRSAAK*DVRYEVLVCRLGWI
Trigger: AATCCAGCCCAGCCGGCAGACCAATACCTCATACCTGACGTCTCACTTGGCCGCAGACCGCCATGGGGGTTCAGTACAGCCAAGATCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS-3UTR CAA 90 bp GAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTGTCAGGTATGAGGTATaGGTCTGCCGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ESLPMRNGRSCRCNWSQSVRYEV*VCRLGW
Trigger: CCAGCCCAGCCGGCAGACCAATACCTCATACCTGAC...ACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CAA 90 bp GAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGTTGCCAACCCTGAAGTaGGGTCCCACCATGAGAACC +
Preference number: 5 (lower is better)
Translates to: EESLPMRNGRSCRCNWSQLPTLK*GPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAA...CTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp GGAGCAAGTGGACCTGGATGCAAGGAGATGGAGGGGGTTGCCTGTGCCCGAGGAGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: GASGPGCKEMEGVACARGGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...TCCTCGGGCACAGGCAACCCCCTCCATCTCCTTGCATCCAGGTCCACTTGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR CAA 90 bp GTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACACCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: VLQCNFTGGKEGGRKGRTPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGG...TGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp TCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCCCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SLSSHCSLMVPELSVKAVPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGG...GACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CAA 90 bp AATCTTACCTTCTCTGCTTGCAGCAGCCCCATGTACCACGTTCTAAGCCTGTTGGTCAGGTATGAGGTATaGGTCTGCCGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NLTFSACSSPMYHVLSLLVRYEV*VCRLGW
Trigger: CCAGCCCAGCCGGCAGACCAATACCTCATACCTGAC...CAACAGGCTTAGAACGTGGTACATGGGGCTGCTGCAAGCAGAGAAGGTAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034949.10
CDS-3UTR CAA 90 bp ACAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: TEESLPMRNGRSCRCNWSPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGG...GCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp TCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAACCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SYSVTSQEGRREGGREGQPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGG...TTGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp GTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCACTGCTGTTAAAGATCTaGGCTGTACTGAACCCCCAT +
Preference number: 5 (lower is better)
Translates to: VIPLLTDGPRTVSEGCLPLLLKI*AVLNPH
Trigger: ATGGGGGTTCAGTACAGCCAAGATCTTTAACAGCAG...TGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS TCA 90 bp GCCAACCCTGAAGTTGGGTCCCACCATGAGAACCCCAGAGGATGTTaGAGTGCCAGATGGTCTCGAACAGTGTGTATTCCTTTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: ANPEVGSHHENPRGC*SARWSRTVCIPLCH
Trigger: ATGGCACAAAGGAATACACACTGTTCGAGACCATCTGGCACTTCAACATCCTCTGGGGTTCTCATGGTGGGACCCAACTTCAGGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000205379.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000207167.2
ENSMUST00000208011.2
CDS-3UTR CAA 90 bp TCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGAACATTCAGCTCTCCATaGGTTGAGCTAACCACCTGT +
Preference number: 5 (lower is better)
Translates to: SNEKWQELQVQLEPESPGTFSSP*VELTTC
Trigger: ACAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGT...TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CAA 90 bp TCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCACATTCAGCTCTCCATaGGTTGAGCTAACCACCTGT +
Preference number: 5 (lower is better)
Translates to: SLPMRNGRSCRCNWSQSPTFSSP*VELTTC
Trigger: ACAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGT...GGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CAA 90 bp GTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTCCCAGGTTTTAGTTGTCCGTaGTCTATCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: VIPLLTDGPRTVSEGCLPGFSCP*SIILFP
Trigger: AGGGAAAAGGATGATAGACAACGGACAACTAAAACC...TGGGAGACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CAA 90 bp CCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAACATGCTCTTTCTTATaGCCTTGTCGGCCAATCAAG +
Preference number: 5 (lower is better)
Translates to: PSNEKWQELQVQLEPESPTCSFL*PCRPIK
Trigger: CTTGATTGGCCGACAAGGCAATAAGAAAGAGCATGT...TGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp TCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGAACATGCTCTTTCTTATaGCCTTGTCGGCCAATCAAG +
Preference number: 5 (lower is better)
Translates to: SNEKWQELQVQLEPESPGTCSFL*PCRPIK
Trigger: CTTGATTGGCCGACAAGGCAATAAGAAAGAGCATGT...TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp GGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTACATGCTCTTTCTTATaGCCTTGTCGGCCAATCAAG +
Preference number: 5 (lower is better)
Translates to: GSLSSHCSLMVPELSVKATCSFL*PCRPIK
Trigger: CTTGATTGGCCGACAAGGCAATAAGAAAGAGCATGT...AGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CAA 90 bp GTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAACATGCTCTTTCTTATaGCCTTGTCGGCCAATCAAG +
Preference number: 5 (lower is better)
Translates to: VLQCNFTGGKEGGRKGRTTCSFL*PCRPIK
Trigger: CTTGATTGGCCGACAAGGCAATAAGAAAGAGCATGT...TGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR CAA 90 bp ATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTGGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: MRNGRSCRCNWSQSPQDLGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...CAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CAA 90 bp CTATCTTCTTGGCCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTGTCAGGTATGAGGTATaGGTCTGCCGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LSSWPHHQLLDRAFSLVVVRYEV*VCRLGW
Trigger: CCAGCCCAGCCGGCAGACCAATACCTCATACCTGAC...AACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGGCCAAGAAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206594.2
CDS TCA 90 bp GAAAAGGGGCCCAGCACAAACCACTCTGCTGTTAAAGATCTTGGCTaGTTTCTAAGAGGCTGTTGTTGTGATGGCCGATCCCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: EKGPSTNHSAVKDLG*FLRGCCCDGRSLCV
Trigger: CACACACAGGGATCGGCCATCACAACAACAGCCTCTTAGAAATCAGCCAAGATCTTTAACAGCAGAGTGGTTTGTGCTGGGCCCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000205884.2
CDS-3UTR CAA 90 bp TCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGAGGTTTTAGTTGTCCGTaGTCTATCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: SNEKWQELQVQLEPESPGGFSCP*SIILFP
Trigger: AGGGAAAAGGATGATAGACAACGGACAACTAAAACC...TCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCACCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGG...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp TGTGTCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGCTCTTTCTTATTGCCTaGTCGGCCAATCAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: CVLQCNFTGGKEGGRKGRLFLIA*SANQEV
Trigger: AACTTCTTGATTGGCCGACAAGGCAATAAGAAAGAG...CCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp TCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCTCTTTCTTATTGCCTaGTCGGCCAATCAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: SLPMRNGRSCRCNWSQSPLFLIA*SANQEV
Trigger: AACTTCTTGATTGGCCGACAAGGCAATAAGAAAGAG...GGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp AGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCCTCTTTCTTATTGCCTaGTCGGCCAATCAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: RFTVIPLLTDGPRTVSEGLFLIA*SANQEV
Trigger: AACTTCTTGATTGGCCGACAAGGCAATAAGAAAGAG...GCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CAA 90 bp TCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTGTCTTGCCTAGATGTGTGTaGATAGACATGTATCTCGCA +
Preference number: 5 (lower is better)
Translates to: SLSSHCSLMVPELSVKAVLPRCV*IDMYLA
Trigger: TGCGAGATACATGTCTATCAACACACATCTAGGCAA...GACAGCCTTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CAA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGTCAGGTATGAGGTATaGGTCTGCCGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPVRYEV*VCRLGW
Trigger: CCAGCCCAGCCGGCAGACCAATACCTCATACCTGAC...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR CAA 90 bp ACAGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCGGTTTTAGTTGTCCGTaGTCTATCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: TEESLPMRNGRSCRCNWSGFSCP*SIILFP
Trigger: AGGGAAAAGGATGATAGACAACGGACAACTAAAACC...GCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp CCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGTTGCCAACCCTGAAGTaGGGTCCCACCATGAGAACC +
Preference number: 5 (lower is better)
Translates to: PHHQLLDRAFSLVVSLCWLPTLK*GPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAA...CCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp GTGAATGACACCTTCACTGTAAACAATGGGAAGAGAGTCAACCAGATAGCCCAATTGCCAACCCTGAAGTaGGGTCCCACCATGAGAACC +
Preference number: 5 (lower is better)
Translates to: VNDTFTVNNGKRVNQIAQLPTLK*GPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAA...TTGGGCTATCTGGTTGACTCTCTTCCCATTGTTTACAGTGAAGGTGTCATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp CTTTGCTCTTTGCCTAGATGTGTGTTGATAGACATGTATCTCGCAGTTCCAGTCTTGCCAACCCTGAAGTaGGGTCCCACCATGAGAACC +
Preference number: 5 (lower is better)
Translates to: LCSLPRCVLIDMYLAVPVLPTLK*GPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAA...GACTGGAACTGCGAGATACATGTCTATCAACACACATCTAGGCAAAGAGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208011.2
CDS-3UTR CAA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGG...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp TCCTACAGTGTAACTTCACAGGAGGGAAGGAGGGAGGGAGGAAGGGAAGGACAACTCTTTCTTATTGCCTaGTCGGCCAATCAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: SYSVTSQEGRREGGREGQLFLIA*SANQEV
Trigger: AACTTCTTGATTGGCCGACAAGGCAATAAGAAAGAG...TTGTCCTTCCCTTCCTCCCTCCCTCCTTCCCTCCTGTGAAGTTACACTGTAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp AGAGGAGTCCCTTCCAATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCACTCTTTCTTATTGCCTaGTCGGCCAATCAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: RGVPSNEKWQELQVQLEPLFLIA*SANQEV
Trigger: AACTTCTTGATTGGCCGACAAGGCAATAAGAAAGAG...TGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATTGGAAGGGACTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp TTGGTTTGGATCTCTACCCTCCCCCACAGAGGAGTCCCTTCCAATGAGAAATGGACATGCTCTTTCTTATaGCCTTGTCGGCCAATCAAG +
Preference number: 5 (lower is better)
Translates to: LVWISTLPHRGVPSNEKWTCSFL*PCRPIK
Trigger: CTTGATTGGCCGACAAGGCAATAAGAAAGAGCATGT...CCATTTCTCATTGGAAGGGACTCCTCTGTGGGGGAGGGTAGAGATCCAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp AATGAGAAATGGCAGGAGCTGCAGGTGCAATTGGAGCCAGAGTCCCCAGGACTTTTGCCTAGATGTGTGTaGATAGACATGTATCTCGCA +
Preference number: 5 (lower is better)
Translates to: NEKWQELQVQLEPESPGLLPRCV*IDMYLA
Trigger: TGCGAGATACATGTCTATCAACACACATCTAGGCAA...AAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATTTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp TTGGTTTGGATCTCTACCCTCCCCCACAGAGGAGTCCCTTCCAATGAGAAATGGGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: LVWISTLPHRGVPSNEKWGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...CCATTTCTCATTGGAAGGGACTCCTCTGTGGGGGAGGGTAGAGATCCAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp TTCAGGTTCACTGTCATCCCACTGCTCACTGATGGTCCCCGAACTGTCAGTGAAGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: FRFTVIPLLTDGPRTVSEGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...TTCACTGACAGTTCGGGGACCATCAGTGAGCAGTGGGATGACAGTGAACCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205884.2
CDS-3UTR CAA 90 bp CAAGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTTGCCAACCCTGAAGTaGGGTCCCACCATGAGAACC +
Preference number: 5 (lower is better)
Translates to: QVLFQWPLFQVHCHPTAHLPTLK*GPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAA...GTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130798.3
CDS-3UTR CAA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCATTGCCAACCCTGAAGTaGGGTCCCACCATGAGAACC +
Preference number: 5 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPLPTLK*GPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAA...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp GCTATCATTAACACCGTCTTCAAAGTAAACGTTCGGTCACAGAGGTCAAACAAGTTGCCAACCCTGAAGTaGGGTCCCACCATGAGAACC +
Preference number: 5 (lower is better)
Translates to: AIINTVFKVNVRSQRSNKLPTLK*GPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAA...CTTGTTTGACCTCTGTGACCGAACGTTTACTTTGAAGACGGTGTTAATGATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207167.2
CDS-3UTR CAA 90 bp GAGTGTACATACTCCATTCGAGAAAGCAACTGGATGGCTATCATTAACACCGTCCCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: ECTYSIRESNWMAIINTVPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGG...GACGGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAATGGAGTATGTACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207167.2
ENSMUST00000208011.2
CDS-3UTR CAA 90 bp GGAGACTTACCTAGTCGCCTGACTCAGACATCTTCACAGACCCTGTTTGCTCCTTTGCCTAGATGTGTGTaGATAGACATGTATCTCGCA +
Preference number: 5 (lower is better)
Translates to: GDLPSRLTQTSSQTLFAPLPRCV*IDMYLA
Trigger: TGCGAGATACATGTCTATCAACACACATCTAGGCAA...AGGAGCAAACAGGGTCTGTGAAGATGTCTGAGTCAGGCGACTAGGTAAGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR CAA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTTTGCCAACCCTGAAGTaGGGTCCCACCATGAGAACC +
Preference number: 5 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSLPTLK*GPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAA...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp CATACTCCATTCGAGAAAGCAACTGGATGGCTATCATTAACACCGTCTTCAAAGCCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGT +
Preference number: 5 (lower is better)
Translates to: HTPFEKATGWLSLTPSSKPHPIF*PTLKLG
Trigger: ACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGG...CTTTGAAGACGGTGTTAATGATAGCCATCCAGTTGCTTTCTCGAATGGAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207167.2
CDS-3UTR CAA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCAACATGCTCTTTCTTATaGCCTTGTCGGCCAATCAAG +
Preference number: 5 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPTCSFL*PCRPIK
Trigger: CTTGATTGGCCGACAAGGCAATAAGAAAGAGCATGT...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCAGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS TCA 90 bp TGTGTGTGGCTTTCTCGAGTTATTGCAGATGCACCAGAATCTACATaGACTGATCCTACTGGAGTAGGAATAGGCCTTCCAACCCAATCA +
Preference number: 5 (lower is better)
Translates to: CVWLSRVIADAPEST*TDPTGVGIGLPTQS
Trigger: TGATTGGGTTGGAAGGCCTATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCCACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205379.2
ENSMUST00000205884.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS-3UTR CAA 90 bp GTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACCCATTGCCTAGATGTGTGTaGATAGACATGTATCTCGCA +
Preference number: 5 (lower is better)
Translates to: VVTVPYEMGYSEITYPDPLPRCV*IDMYLA
Trigger: TGCGAGATACATGTCTATCAACACACATCTAGGCAA...TGGGTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp TGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAGACGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: CVVTVPYEMGYSEITYPDGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...GTCTGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTACATTCAGCTCTCCATaGGTTGAGCTAACCACCTGT +
Preference number: 5 (lower is better)
Translates to: SPKASSSAKESFPTVFKSTFSSP*VELTTC
Trigger: ACAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGT...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
CDS-3UTR CAA 90 bp CCACACCACCAGCTTCTTGATAGAGCCTTTAGCTTAGTAGTTTCTTTATGCTGGGGTTTTAGTTGTCCGTaGTCTATCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: PHHQLLDRAFSLVVSLCWGFSCP*SIILFP
Trigger: AGGGAAAAGGATGATAGACAACGGACAACTAAAACC...CCAGCATAAAGAAACTACTAAGCTAAAGGCTCTATCAAGAAGCTGGTGGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206594.2
CDS-3UTR CAA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCAACATGCTCTTTCTTATaGCCTTGTCGGCCAATCAAG +
Preference number: 5 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPTCSFL*PCRPIK
Trigger: CTTGATTGGCCGACAAGGCAATAAGAAAGAGCATGT...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp TCTCCAAAGGCTAGTTCCTCTGCAAAGGAGTCTTTTCCAACGGTGTTCAAATCTTTGCCTAGATGTGTGTaGATAGACATGTATCTCGCA +
Preference number: 5 (lower is better)
Translates to: SPKASSSAKESFPTVFKSLPRCV*IDMYLA
Trigger: TGCGAGATACATGTCTATCAACACACATCTAGGCAA...AGATTTGAACACCGTTGGAAAAGACTCCTTTGCAGAGGAACTAGCCTTTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp AAGGAAGTGAACACTTTCAGAAATCTTGGGGACTTGCTGTTTCCTGCAGTTTGTGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: KEVNTFRNLGDLLFPAVCGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...ACAAACTGCAGGAAACAGCAAGTCCCCAAGATTTCTGAAAGTGTTCACTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
CDS-3UTR CAA 90 bp AGTCTTATTTCAATGGCCTTTATTTCAGGTTCACTGTCATCCCACTGCTCACTGGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTA +
Preference number: 5 (lower is better)
Translates to: SLISMAFISGSLSSHCSLGFLEL*QMHQNL
Trigger: TAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCC...CAGTGAGCAGTGGGATGACAGTGAACCTGAAATAAAGGCCATTGAAATAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000136773.3
CDS-3UTR CAA 90 bp ATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTGAGATAACATATCCACTCTTTCTTATTGCCTaGTCGGCCAATCAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: ICVVTVPYEMGYSEITYPLFLIA*SANQEV
Trigger: AACTTCTTGATTGGCCGACAAGGCAATAAGAAAGAG...TGGATATGTTATCTCAGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp GCTATCATTAACACCGTCTTCAAAGTAAACGTTCGGTCACAGAGGTCAAACAAGGAGCACGTGATTTTATaGGTTCCTAATCTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: AIINTVFKVNVRSQRSNKEHVIL*VPNLSS
Trigger: AGAGCTCAGATTAGGAACCAATAAAATCACGTGCTC...CTTGTTTGACCTCTGTGACCGAACGTTTACTTTGAAGACGGTGTTAATGATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207167.2
CDS-3UTR CAA 90 bp GTATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTGGTTTTAGTTGTCCGTaGTCTATCATCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: VYLKITFVLSRCPMKWATGFSCP*SIILFP
Trigger: AGGGAAAAGGATGATAGACAACGGACAACTAAAACC...AGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS-3UTR CAA 90 bp ATACTTAAAGATCACATTTGTGTTGTCACGGTGCCCTATGAAATGGGCTACTCTCTCTTTCTTATTGCCTaGTCGGCCAATCAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: ILKDHICVVTVPYEMGYSLFLIA*SANQEV
Trigger: AACTTCTTGATTGGCCGACAAGGCAATAAGAAAGAG...AGAGTAGCCCATTTCATAGGGCACCGTGACAACACAAATGTGATCTTTAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206528.2
CDS TCA 72 bp CCCATGGCGGTCTGCGGCCAAGTGAGACGTCAGGTATaGGGTATTGGTCTGCCGGCTGGGCTGGATTTCCCA +
Preference number: 6 (lower is better)
Translates to: PMAVCGQVRRQV*GIGLPAGLDFP
Trigger: TGGGAAATCCAGCCCAGCCGGCAGACCAATACCTCATACCTGACGTCTCACTTGGCCGCAGACCGCCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000136773.3
ENSMUST00000206048.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS TCA 72 bp GGCTGTACTGAACCCCCATGGCGGTCTGCGGCCAAGTaGGACGTCAGGTATGAGGTATTGGTCTGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: GCTEPPWRSAAK*DVRYEVLVCRL
Trigger: CAGCCGGCAGACCAATACCTCATACCTGACGTCTCACTTGGCCGCAGACCGCCATGGGGGTTCAGTACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS TCA 72 bp ACCTGTACTGAACCCCCATGGCGGTCTGCGGCCAAGTaGGACGTCAGGTATGAGGTATTGGTCTGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: TCTEPPWRSAAK*DVRYEVLVCRL
Trigger: CAGCCGGCAGACCAATACCTCATACCTGACGTCTCACTTGGCCGCAGACCGCCATGGGGGTTCAGTACAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000034949.10
ENSMUST00000206048.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS CCA 72 bp AGTGAGACGTCAGGTATGAGGTATTGGTCTGCCGGCTaGGCTGGATTTCCCACTCTCCTCGGCGCTCTGATG +
Preference number: 6 (lower is better)
Translates to: SETSGMRYWSAG*AGFPTLLGALM
Trigger: CATCAGAGCGCCGAGGAGAGTGGGAAATCCAGCCCAGCCGGCAGACCAATACCTCATACCTGACGTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000136773.3
ENSMUST00000206048.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS CAA 72 bp AGGGGCCCAGCACAAACCACTCTGCTGTTAAAGATCTaGGCTGTACTGAACCCCCATGGCGGTCTGCGGCCA +
Preference number: 6 (lower is better)
Translates to: RGPAQTTLLLKI*AVLNPHGGLRP
Trigger: TGGCCGCAGACCGCCATGGGGGTTCAGTACAGCCAAGATCTTTAACAGCAGAGTGGTTTGTGCTGGGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136773.3
CDS CCA 72 bp GACGTCAGGTATGAGGTATTGGTCTGCCGGCTGGGCTaGATTTCCCACTCTCCTCGGCGCTCTGATGATGTA +
Preference number: 6 (lower is better)
Translates to: DVRYEVLVCRLG*ISHSPRRSDDV
Trigger: TACATCATCAGAGCGCCGAGGAGAGTGGGAAATCCAGCCCAGCCGGCAGACCAATACCTCATACCTGACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000034949.10
ENSMUST00000136773.3
ENSMUST00000206048.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS CAA 72 bp AATCTGAGCTCTCCGAAGTTCCCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGTCCCACCATGAGAACC +
Preference number: 6 (lower is better)
Translates to: NLSSPKFPHPIF*PTLKLGPTMRT
Trigger: GGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGGGAACTTCGGAGAGCTCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000205379.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000207167.2
ENSMUST00000208011.2
CDS CAA 90 bp TTGGTTCCTAATCTGAGCTCTCCGAAGTTCCCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGTCCCACCATGAGAACCCCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: LVPNLSSPKFPHPIF*PTLKLGPTMRTPED
Trigger: ATCCTCTGGGGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGGGAACTTCGGAGAGCTCAGATTAGGAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207167.2
CDS TCA 72 bp GAAGTTGGGTCCCACCATGAGAACCCCAGAGGATGTTaGAGTGCCAGATGGTCTCGAACAGTGTGTATTCCT +
Preference number: 6 (lower is better)
Translates to: EVGSHHENPRGC*SARWSRTVCIP
Trigger: AGGAATACACACTGTTCGAGACCATCTGGCACTTCAACATCCTCTGGGGTTCTCATGGTGGGACCCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000205379.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000207167.2
ENSMUST00000208011.2
CDS CAA 90 bp TTTTTACCTAATCTGAGCTCTCCGAAGTTCCCACACCCTATCTTCTaGCCAACCCTGAAGTTGGGTCCCACCATGAGAACCCCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: FLPNLSSPKFPHPIF*PTLKLGPTMRTPED
Trigger: ATCCTCTGGGGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAAGAAGATAGGGTGTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000205379.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000208011.2
CDS CCA 72 bp AGAGGCTGTTGTTGTGATGGCCGATCCCTGTGTGTGTaGCTTTCTCGAGTTATTGCAGATGCACCAGAATCT +
Preference number: 6 (lower is better)
Translates to: RGCCCDGRSLCV*LSRVIADAPES
Trigger: AGATTCTGGTGCATCTGCAATAACTCGAGAAAGCCACACACACAGGGATCGGCCATCACAACAACAGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205379.2
ENSMUST00000205884.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS TCA 72 bp TCCAGTGGGGTCATCGACATTCAGCTCTCCATTGGTTaGGCTAACCACCTGATTTCTAAGAGGCTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: SSGVIDIQLSIG*ANHLISKRLLL
Trigger: CAACAACAGCCTCTTAGAAATCAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGTCGATGACCCCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117849.3
ENSMUST00000205379.2
ENSMUST00000206528.2
CDS TCA 72 bp CCCAGCACAAACCACTCTGCTGTTAAAGATCTTGGCTaGTTTCTAAGAGGCTGTTGTTGTGATGGCCGATCC +
Preference number: 6 (lower is better)
Translates to: PSTNHSAVKDLG*FLRGCCCDGRS
Trigger: GGATCGGCCATCACAACAACAGCCTCTTAGAAATCAGCCAAGATCTTTAACAGCAGAGTGGTTTGTGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000130798.3
ENSMUST00000205884.2
CDS CAA 72 bp ATGGCCGATCCCTGTGTGTGTGGCTTTCTCGAGTTATaGCAGATGCACCAGAATCTACATGAACTGATCCTA +
Preference number: 6 (lower is better)
Translates to: MADPCVCGFLEL*QMHQNLHELIL
Trigger: TAGGATCAGTTCATGTAGATTCTGGTGCATCTGCAATAACTCGAGAAAGCCACACACACAGGGATCGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205379.2
ENSMUST00000205884.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS TCA 72 bp CTTTCTCGAGTTATTGCAGATGCACCAGAATCTACATaGACTGATCCTACTGGAGTAGGAATAGGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: LSRVIADAPEST*TDPTGVGIGLP
Trigger: TGGAAGGCCTATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCTGGTGCATCTGCAATAACTCGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205379.2
ENSMUST00000205884.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000206969.2
CDS GCA 72 bp AGTGCCAGATGGTCTCGAACAGTGTGTATTCCTTTGTaGCATGGTTTTAGTTGTCCGTTGTCTATCATCCTT +
Preference number: 6 (lower is better)
Translates to: SARWSRTVCIPL*HGFSCPLSIIL
Trigger: AAGGATGATAGACAACGGACAACTAAAACCATGGCACAAAGGAATACACACTGTTCGAGACCATCTGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000154589.2
ENSMUST00000205379.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000207167.2
ENSMUST00000208011.2
CDS CAA 72 bp GTGTGTATTCCTTTGTGCCATGGTTTTAGTTGTCCGTaGTCTATCATCCTTTTCCCTATTAGAATGGTCCAT +
Preference number: 6 (lower is better)
Translates to: VCIPLCHGFSCP*SIILFPIRMVH
Trigger: ATGGACCATTCTAATAGGGAAAAGGATGATAGACAACGGACAACTAAAACCATGGCACAAAGGAATACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000154589.2
ENSMUST00000205379.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000207167.2
ENSMUST00000208011.2
CDS TCA 72 bp AGTCAAAGGTATAGCCTTTCCGTTCAAACAGATCTGTaGAGAGGGTCCGTAAATACTCATAATCAGGTTTTT +
Preference number: 6 (lower is better)
Translates to: SQRYSLSVQTDL*RGSVNTHNQVF
Trigger: AAAAACCTGATTATGAGTATTTACGGACCCTCTTCACAGATCTGTTTGAACGGAAAGGCTATACCTTTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000034949.10
ENSMUST00000117849.3
ENSMUST00000130798.3
ENSMUST00000136773.3
ENSMUST00000205379.2
ENSMUST00000205884.2
ENSMUST00000206048.2
ENSMUST00000206528.2
ENSMUST00000206594.2
ENSMUST00000206969.2