Pregenerated sensors for CSNK1E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022433Ensembl transcript IDs: ENSMUST00000117786.9, ENSMUST00000120859.9, ENSMUST00000122044.8, ENSMUST00000135519.2, ENSMUST00000144790.8, ENSMUST00000156043.2, ENSMUST00000156513.3, ENSMUST00000230599.2, ENSMUST00000230942.2
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCCGGCACGTGGTGGCCGGTGGCGAGAACAGGTGGCTGGCATGTaGCCCAGTGTCCTTAGAGGAGTGTTGGCAGCCTTCAGGTCGGGA | + |
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Preference number: 1 (lower is better) Translates to: GPARGGRWREQVAGM*PSVLRGVLAAFRSG Trigger: TCCCGACCTGAAGGCTGCCAACACTCCTCTAAGGACACTGGGTCACATGCCAGCCACCTGTTCTCGCCACCGGCCACCACGTGCCGGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR GCA 90 bp | CAGCCACCTCTTTCGAACAGGGTGTCACCCTGCCACTCCGCAGGATaGTTCCTTAAGCTTGTCAGAGAGGTGGCTGAGACACCCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QPPLSNRVSPCHSAG*FLKLVREVAETPWW Trigger: CCACCAGGGTGTCTCAGCCACCTCTCTGACAAGCTTAAGGAAGCATCCTGCGGAGTGGCAGGGTGACACCCTGTTCGAAAGAGGTGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CCA 90 bp | AGTGGCTGTGTCCTCAGAGAGAAGCAGCTGGGGATTCCAGTCCCTTaGGGGTGGAACACGGGAGGTCATTCCAAGGTCAAGTGGGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SGCVLREKQLGIPVP*GWNTGGHSKVKWVL Trigger: AAGGACCCACTTGACCTTGGAATGACCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCCCAGCTGCTTCTCTCTGAGGACACAGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CCA 90 bp | CTCCTCCTGACTAGAACAGTGGCTGTGTCCTCAGAGAGAAGCAGCTaGGGATTCCAGTCCCTTGGGGGTGGAACACGGGAGGTCATTCCA | + |
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Preference number: 1 (lower is better) Translates to: LLLTRTVAVSSERSS*GFQSLGGGTREVIP Trigger: TGGAATGACCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCCCAGCTGCTTCTCTCTGAGGACACAGCCACTGTTCTAGTCAGGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR TCA 90 bp | TATGGCACCAACCCCTCCCTGGCGGTCACTATTCCTTCTTCAGGCTaGTCCTGGCCCTTGGGCAGCTGGTTTGCTCTTGAGGATCCTATG | + |
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Preference number: 1 (lower is better) Translates to: YGTNPSLAVTIPSSG*SWPLGSWFALEDPM Trigger: CATAGGATCCTCAAGAGCAAACCAGCTGCCCAAGGGCCAGGATCAGCCTGAAGAAGGAATAGTGACCGCCAGGGAGGGGTTGGTGCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR GCA 90 bp | AACCTTTCCACTGGGCAGCCACCTCTTTCGAACAGGGTGTCACCCTaGCACTCCGCAGGATGCTTCCTTAAGCTTGTCAGAGAGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: NLSTGQPPLSNRVSP*HSAGCFLKLVREVA Trigger: AGCCACCTCTCTGACAAGCTTAAGGAAGCATCCTGCGGAGTGGCAGGGTGACACCCTGTTCGAAAGAGGTGGCTGCCCAGTGGAAAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR GCA 90 bp | CCTTCCGGTCTGTTTGTTGCTCAAGGAGTCCTGTCTGCAGAGTACTaGTGGACGGCTTCTATTTGCAGGGCAGGTGGGAAGGCCTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: PSGLFVAQGVLSAEY*WTASICRAGGKAWS Trigger: AGACCAGGCCTTCCCACCTGCCCTGCAAATAGAAGCCGTCCAGCAGTACTCTGCAGACAGGACTCCTTGAGCAACAAACAGACCGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CCA 90 bp | TCCGGTCTGTTTGTTGCTCAAGGAGTCCTGTCTGCAGAGTACTGCTaGACGGCTTCTATTTGCAGGGCAGGTGGGAAGGCCTGGTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: SGLFVAQGVLSAEYC*TASICRAGGKAWSW Trigger: CCAAGACCAGGCCTTCCCACCTGCCCTGCAAATAGAAGCCGTCCAGCAGTACTCTGCAGACAGGACTCCTTGAGCAACAAACAGACCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR GCA 90 bp | GAGGAGGGGAACAGAAACTTGGCCAGGCAGGCGTGGCAGGCCACCTaGAGCTCTGAAAAATACAAGTCAGCAGTCTCTCAGTCAGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: EEGNRNLARQAWQAT*SSEKYKSAVSQSVS Trigger: AGAGACTGACTGAGAGACTGCTGACTTGTATTTTTCAGAGCTGCAGGTGGCCTGCCACGCCTGCCTGGCCAAGTTTCTGTTCCCCTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR TCA 90 bp | GTGTGTGTCATCCAAGGCTCCATGAAATCTCTTGGGACTTGTCTCTaGCTGGCCAAACCGCTCCCTGACACAAGCTCTTCAGGCACCTCC | + |
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Preference number: 1 (lower is better) Translates to: VCVIQGSMKSLGTCL*LAKPLPDTSSSGTS Trigger: GGAGGTGCCTGAAGAGCTTGTGTCAGGGAGCGGTTTGGCCAGTCAGAGACAAGTCCCAAGAGATTTCATGGAGCCTTGGATGACACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR GCA 90 bp | TCAAGTGGGTCCTTCCGGTCTGTTTGTTGCTCAAGGAGTCCTGTCTaGAGAGTACTGCTGGACGGCTTCTATTTGCAGGGCAGGTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SSGSFRSVCCSRSPV*RVLLDGFYLQGRWE Trigger: TTCCCACCTGCCCTGCAAATAGAAGCCGTCCAGCAGTACTCTGCAGACAGGACTCCTTGAGCAACAAACAGACCGGAAGGACCCACTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR TCA 90 bp | TGGGAAAGCCCCATACAACACTGGTCACTGTCATCACCCAAGGGCTaGTGGCGTGTGTGTCATCCAAGGCTCCATGAAATCTCTTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: WESPIQHWSLSSPKG*WRVCHPRLHEISWD Trigger: GTCCCAAGAGATTTCATGGAGCCTTGGATGACACACACGCCATCAGCCCTTGGGTGATGACAGTGACCAGTGTTGTATGGGGCTTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR TCA 90 bp | GAACAGAAACTTGGCCAGGCAGGCGTGGCAGGCCACCTGCAGCTCTaGAAAATACAAGTCAGCAGTCTCTCAGTCAGTCTCTCAGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: EQKLGQAGVAGHLQL*KIQVSSLSVSLSVS Trigger: ACTGACTGAGAGACTGACTGAGAGACTGCTGACTTGTATTTTTCAGAGCTGCAGGTGGCCTGCCACGCCTGCCTGGCCAAGTTTCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR TCA 90 bp | AGCTGTGAAAGTTTCTGCTGTGTGTTCTGCAGATGGTCTTGGCGATaGAGCTGGCCACGTGGTGACAGGGTCACACAAAGCGGAGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: SCESFCCVFCRWSWR*SWPRGDRVTQSGGK Trigger: TTTGCCTCCGCTTTGTGTGACCCTGTCACCACGTGGCCAGCTTCATCGCCAAGACCATCTGCAGAACACACAGCAGAAACTTTCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR TCA 90 bp | ATGTCTGGCTCCATCTTAGAGATGTCACTGTACGGAGCCTCCTCCTaGCTAGAACAGTGGCTGTGTCCTCAGAGAGAAGCAGCTGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: MSGSILEMSLYGASS*LEQWLCPQREAAGD Trigger: ATCCCCAGCTGCTTCTCTCTGAGGACACAGCCACTGTTCTAGTCAGGAGGAGGCTCCGTACAGTGACATCTCTAAGATGGAGCCAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CCA 90 bp | CCACAAGAAAACATAGAAGTCAGTGCCCCAAGTTACACAAATGTCTaGCTCCATCTTAGAGATGTCACTGTACGGAGCCTCCTCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: PQENIEVSAPSYTNV*LHLRDVTVRSLLLT Trigger: AGTCAGGAGGAGGCTCCGTACAGTGACATCTCTAAGATGGAGCCAGACATTTGTGTAACTTGGGGCACTGACTTCTATGTTTTCTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR TCA 90 bp | CAGAGGGATAGATGCCCAGGTCTAGAGAATACAAAGTCTGTTCTTTaGGCTTCACTGAGAAGGGTCAAAGCCCATCTCCACATTAGACTT | + |
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Preference number: 1 (lower is better) Translates to: QRDRCPGLENTKSVL*ASLRRVKAHLHIRL Trigger: AAGTCTAATGTGGAGATGGGCTTTGACCCTTCTCAGTGAAGCTCAAAGAACAGACTTTGTATTCTCTAGACCTGGGCATCTATCCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR TCA 90 bp | CATGCTGGATGTAGCAGTCACTTGTCCTTTCTCAGGGAAAGCTGGTaGCTAAGAAGCAAGCATCCATTTCCAAATACTTTAGTGAATGAA | + |
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Preference number: 1 (lower is better) Translates to: HAGCSSHLSFLRESW*LRSKHPFPNTLVNE Trigger: TTCATTCACTAAAGTATTTGGAAATGGATGCTTGCTTCTTAGTCACCAGCTTTCCCTGAGAAAGGACAAGTGACTGCTACATCCAGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGAGAGAAGCAGCTGGGGATTCCAGTCCCTTGGGGGTGGAACACGGGAGGGCACAAGGGGCACTGTaGAGGAAGCACCTCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PQREAAGDSSPLGVEHGRAQGAL*RKHLLQ Trigger: CTGCAGGAGGTGCTTCCTTCACAGTGCCCCTTGTGC...CCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCCCAGCTGCTTCTCTCTGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGCGATGAAGCTGGCCACGTGGTGACAGGGTCACACAAAGCGGAGGCAAAGGTAGCACATGCCTGGTaGCCCAGGCCTGAACATCCG | + |
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Preference number: 2 (lower is better) Translates to: LGDEAGHVVTGSHKAEAKVAHAW*PRPEHP Trigger: CGGATGTTCAGGCCTGGGGCACCAGGCATGTGCTAC...CTTTGCCTCCGCTTTGTGTGACCCTGTCACCACGTGGCCAGCTTCATCGCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CAA 90 bp | CAGTGGCTGTGTCCTCAGAGAGAAGCAGCTGGGGATTCCAGTCCCTaGGGGGTGGAACACGGGAGGTCATTCCAAGGTCAAGTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: QWLCPQREAAGDSSP*GVEHGRSFQGQVGP Trigger: AGGACCCACTTGACCTTGGAATGACCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCCCAGCTGCTTCTCTCTGAGGACACAGCCACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGACGGCTTCTATTTGCAGGGCAGGTGGGAAGGCCTGGTCTTGGGATGAGAAAGGTCCCCAGCCTGTaGGGCTTCCTTGGAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: AGRLLFAGQVGRPGLGMRKVPSL*GFLGEQ Trigger: CTGTTCTCCAAGGAAGCCTCACAGGCTGGGGACCTT...TCTCATCCCAAGACCAGGCCTTCCCACCTGCCCTGCAAATAGAAGCCGTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CAA 90 bp | GGACTCTATGCCCTGAGGGATGTGGAAGTCATTGTCCACCCCACCTaGACTTTAGGAGGAGGGGAACAGAAACTTGGCCAGGCAGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: GLYALRDVEVIVHPT*TLGGGEQKLGQAGV Trigger: CACGCCTGCCTGGCCAAGTTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTCCACATCCCTCAGGGCATAGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR-3UTR TCA 90 bp | ACATGCTCTGCGCTAGAAGGAGCTTCGATGCCCACCTCTCACTCCAGTCCCAGACAGCTGGTTTGCTCTTaGGGATCCTATGCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TCSALEGASMPTSHSSPRQLVCS*GSYAGP Trigger: AGGCCCTGCATAGGATCCTCAAGAGCAAACCAGCTG...TCTGGGACTGGAGTGAGAGGTGGGCATCGAAGCTCCTTCTAGCGCAGAGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTCAGGGAAGGGGATTCTGGGAAAGCCCCATACAACACTGGTCACTGTCATCGGTGGCGAGAACAGGTaGCTGGCATGTGACCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: CSGKGILGKPHTTLVTVIGGENR*LACDPV Trigger: CACTGGGTCACATGCCAGCCACCTGTTCTCGCCACC...GATGACAGTGACCAGTGTTGTATGGGGCTTTCCCAGAATCCCCTTCCCTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGCTTCGATGCCCACCTCTCACTCCAGTCCCAGACAGAAAAGCCACAGAGGCTGATCCTGGCCCTTaGGCAGCTGGTTTGCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: KELRCPPLTPVPDRKATEADPGP*AAGLLL Trigger: CAAGAGCAAACCAGCTGCCCAAGGGCCAGGATCAGC...CTCTGTGGCTTTTCTGTCTGGGACTGGAGTGAGAGGTGGGCATCGAAGCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CAA 90 bp | AACACGGGAGGTCATTCCAAGGTCAAGTGGGTCCTTCCGGTCTGTTaGTTGCTCAAGGAGTCCTGTCTGCAGAGTACTGCTGGACGGCTT | + |
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Preference number: 2 (lower is better) Translates to: NTGGHSKVKWVLPVC*LLKESCLQSTAGRL Trigger: AAGCCGTCCAGCAGTACTCTGCAGACAGGACTCCTTGAGCAACAAACAGACCGGAAGGACCCACTTGACCTTGGAATGACCTCCCGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR TCA 90 bp | GCCACCTGCAGCTCTGAAAAATACAAGTCAGCAGTCTCTCAGTCAGTCTCTCAGGGCCAAACCGCTCCCTaGCACAAGCTCTTCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: ATCSSEKYKSAVSQSVSQGQTAP*HKLFRH Trigger: GTGCCTGAAGAGCTTGTGTCAGGGAGCGGTTTGGCC...CTGAGAGACTGACTGAGAGACTGCTGACTTGTATTTTTCAGAGCTGCAGGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR-3UTR CCA 90 bp | CATCCAAGGCTCCATGAAATCTCTTGGGACTTGTCTCTGACTGGCCAAACCGCTGCGAGAACAGGTGGCTaGCATGTGACCCAGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HPRLHEISWDLSLTGQTAARTGG*HVTQCP Trigger: AGGACACTGGGTCACATGCCAGCCACCTGTTCTCGC...AGCGGTTTGGCCAGTCAGAGACAAGTCCCAAGAGATTTCATGGAGCCTTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR-3UTR TCA 90 bp | GCCACCTGCAGCTCTGAAAAATACAAGTCAGCAGTCTCTCAGTCAGTCTCTCAGGTCTCTGTAGAGAGGTaGCAGGTGTGTGTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ATCSSEKYKSAVSQSVSQVSVER*QVCVGE Trigger: CTCCCCCACACACACCTGTCACCTCTCTACAGAGAC...CTGAGAGACTGACTGAGAGACTGCTGACTTGTATTTTTCAGAGCTGCAGGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCCTGACCCAGGGTCCTACTCAGAAGTCAGGCCTGGGAAGAGGGGTGACCCAGACTCCAAGAACTTaGCTAAGATCAGGAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: LALTQGPTQKSGLGRGVTQTPRT*LRSGME Trigger: TTCCATTCCTGATCTTAGGCAAGTTCTTGGAGTCTG...GGTCACCCCTCTTCCCAGGCCTGACTTCTGAGTAGGACCCTGGGTCAGGGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR CAA 90 bp | TCACTATTCCTTCTTCAGGCTGATCCTGGCCCTTGGGCAGCTGGTTaGCTCTTGAGGATCCTATGCAGGGCCTTTCGTCATAACCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: SLFLLQADPGPWAAG*LLRILCRAFRHNLS Trigger: GGAAAGGTTATGACGAAAGGCCCTGCATAGGATCCTCAAGAGCAAACCAGCTGCCCAAGGGCCAGGATCAGCCTGAAGAAGGAATAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCTCAAGGAGTCCTGTCTGCAGAGTACTGCTGGACGGCTTCTATTTGCAGGGGTCCATAGACCCTCCTaGAGGACAAATGTTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LLKESCLQSTAGRLLFAGVHRPS*RTNVPS Trigger: ACTGGGAACATTTGTCCTCCAGGAGGGTCTATGGAC...CCCTGCAAATAGAAGCCGTCCAGCAGTACTCTGCAGACAGGACTCCTTGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGTCATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAACTTGGCAGCCCCATACAACACTaGTCACTGTCATCACCCAAG | + |
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Preference number: 2 (lower is better) Translates to: EVIVHPTLTLGGGEQKLGSPIQH*SLSSPK Trigger: CTTGGGTGATGACAGTGACCAGTGTTGTATGGGGCT...GCCAAGTTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAGTCAGTGCCCCAAGTTACACAAATGTCTGGCTCCATCTTAGAGATGTCGGGATTCCAGTCCCTTaGGGGTGGAACACGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: IEVSAPSYTNVWLHLRDVGIPVP*GWNTGG Trigger: ACCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCC...GACATCTCTAAGATGGAGCCAGACATTTGTGTAACTTGGGGCACTGACTTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR TCA 90 bp | GATGTGGAAGTCATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAAGGCCACCTGCAGCTCTaGAAAATACAAGTCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: DVEVIVHPTLTLGGGEQKGHLQL*KIQVSS Trigger: ACTGCTGACTTGTATTTTTCAGAGCTGCAGGTGGCC...TTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTCCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTGGTGTCCAGAAGACAAGGCCTATCTATGTTCGTTCTTAACACTGGATGGAATTCCTTCTTCAGGCTaGTCCTGGCCCTTGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SWCPEDKAYLCSFLTLDGIPSSG*SWPLGS Trigger: GCTGCCCAAGGGCCAGGATCAGCCTGAAGAAGGAAT...TCCATCCAGTGTTAAGAACGAACATAGATAGGCCTTGTCTTCTGGACACCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAAATACAAGTCAGCAGTCTCTCAGTCAGTCTCTCAGTCAGTCTCTCAGTGGTGACAGGTGTGTGTaGGGGAGACCAGGATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LKNTSQQSLSQSLSQSLSGDRCV*GRPGCS Trigger: TGAGCATCCTGGTCTCCCCCACACACACCTGTCACC...ACTGAGAGACTGACTGAGAGACTGACTGAGAGACTGCTGACTTGTATTTTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGGGAAAGCTGGTGACTAAGAAGCAAGCATCCATTTCCAAATACTTTAGTAACAGGGTGTCACCCTaGCACTCCGCAGGATGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SQGKLVTKKQASISKYFSNRVSP*HSAGCF Trigger: GAAGCATCCTGCGGAGTGGCAGGGTGACACCCTGTT...ACTAAAGTATTTGGAAATGGATGCTTGCTTCTTAGTCACCAGCTTTCCCTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGAAGTCAGTGCCCCAAGTTACACAAATGTCTGGCTCCATCTTAGAGATGTCAAGGCTGTCCAGCTTTaGACTCTAGAGTCTACTTCC | + |
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Preference number: 2 (lower is better) Translates to: IEVSAPSYTNVWLHLRDVKAVQL*TLESTS Trigger: GGAAGTAGACTCTAGAGTTCAAAGCTGGACAGCCTT...GACATCTCTAAGATGGAGCCAGACATTTGTGTAACTTGGGGCACTGACTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR CCA 90 bp | GTACACGTGGGTAAAGAGAAGGAAGTGTTTTTAATGAGCTCAGAATCAATACATTGGAGCAGTGTCCTGTaGTATGGCACCAACCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VHVGKEKEVFLMSSESIHWSSVL*YGTNPS Trigger: GGAGGGGTTGGTGCCATACCACAGGACACTGCTCCA...ATGTATTGATTCTGAGCTCATTAAAAACACTTCCTTCTCTTTACCCACGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGGGAAAGCTGGTGACTAAGAAGCAAGCATCCATTTCCAAATACTTTAGTTGCCACTCCGCAGGATaGTTCCTTAAGCTTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SQGKLVTKKQASISKYFSCHSAG*FLKLVR Trigger: TCTGACAAGCTTAAGGAAGCATCCTGCGGAGTGGCA...ACTAAAGTATTTGGAAATGGATGCTTGCTTCTTAGTCACCAGCTTTCCCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CCA 72 bp | TGCGGGCCCAGCGCAAGGCCAAGGGCGGGGGCAGGGTaGCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: CGPSARPRAGAG*RKSFVVSGLSL Trigger: CAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGCCACCCTGCCCCCGCCCTTGGCCTTGCGCTGGGCCCGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| 3UTR-3UTR CAA 90 bp | CCTCAGAGAGAAGCAGCTGGGGATTCCAGTCCCTTGGGGGTGGAACACGGGAGGGCCTGTGAGGCTTCCTaGGAGAACAGGCTCAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: PQREAAGDSSPLGVEHGRACEAS*ENRLRP Trigger: TGGCCTGAGCCTGTTCTCCAAGGAAGCCTCACAGGC...CCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCCCAGCTGCTTCTCTCTGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CCA 72 bp | GAGGGGTGCCACACACTGGCATCTGGGGACAGGTGGTaGCAAGGACTCTATGCCCTGAGGGATGTGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: EGCHTLASGDRW*QGLYALRDVEV Trigger: GACTTCCACATCCCTCAGGGCATAGAGTCCTTGCCACCACCTGTCCCCAGATGCCAGTGTGTGGCACCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| 3UTR TCA 72 bp | AACCCCTCCCTGGCGGTCACTATTCCTTCTTCAGGCTaGTCCTGGCCCTTGGGCAGCTGGTTTGCTCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NPSLAVTIPSSG*SWPLGSWFALE Trigger: CTCAAGAGCAAACCAGCTGCCCAAGGGCCAGGATCAGCCTGAAGAAGGAATAGTGACCGCCAGGGAGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR GCA 72 bp | GTCCTGTCTGCAGAGTACTGCTGGACGGCTTCTATTTaGAGGGCAGGTGGGAAGGCCTGGTCTTGGGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: VLSAEYCWTASI*RAGGKAWSWDE Trigger: CTCATCCCAAGACCAGGCCTTCCCACCTGCCCTGCAAATAGAAGCCGTCCAGCAGTACTCTGCAGACAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR CCA 72 bp | AGAGAGAAGCAGCTGGGGATTCCAGTCCCTTGGGGGTaGAACACGGGAGGTCATTCCAAGGTCAAGTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: REKQLGIPVPWG*NTGGHSKVKWV Trigger: GACCCACTTGACCTTGGAATGACCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCCCAGCTGCTTCTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR CCA 72 bp | GTCCTCAGAGAGAAGCAGCTGGGGATTCCAGTCCCTTaGGGGTGGAACACGGGAGGTCATTCCAAGGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLREKQLGIPVP*GWNTGGHSKVK Trigger: CTTGACCTTGGAATGACCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCCCAGCTGCTTCTCTCTGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR GCA 72 bp | ACTGGGCAGCCACCTCTTTCGAACAGGGTGTCACCCTaGCACTCCGCAGGATGCTTCCTTAAGCTTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TGQPPLSNRVSP*HSAGCFLKLVR Trigger: TCTGACAAGCTTAAGGAAGCATCCTGCGGAGTGGCAGGGTGACACCCTGTTCGAAAGAGGTGGCTGCCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR CCA 72 bp | AGGCCGATAATGGGGTCTAGATGGAGCAGTGTCCTGTaGTATGGCACCAACCCCTCCCTGGCGGTCACTATT | + |
|
Preference number: 3 (lower is better) Translates to: RPIMGSRWSSVL*YGTNPSLAVTI Trigger: AATAGTGACCGCCAGGGAGGGGTTGGTGCCATACCACAGGACACTGCTCCATCTAGACCCCATTATCGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR CCA 72 bp | TGGGGGTGGAACACGGGAGGTCATTCCAAGGTCAAGTaGGTCCTTCCGGTCTGTTTGTTGCTCAAGGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: WGWNTGGHSKVK*VLPVCLLLKES Trigger: GGACTCCTTGAGCAACAAACAGACCGGAAGGACCCACTTGACCTTGGAATGACCTCCCGTGTTCCACCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR GCA 72 bp | CTTTCGAACAGGGTGTCACCCTGCCACTCCGCAGGATaGTTCCTTAAGCTTGTCAGAGAGGTGGCTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSNRVSPCHSAG*FLKLVREVAET Trigger: TGTCTCAGCCACCTCTCTGACAAGCTTAAGGAAGCATCCTGCGGAGTGGCAGGGTGACACCCTGTTCGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR CCA 72 bp | TTTGTTGCTCAAGGAGTCCTGTCTGCAGAGTACTGCTaGACGGCTTCTATTTGCAGGGCAGGTGGGAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FVAQGVLSAEYC*TASICRAGGKA Trigger: GGCCTTCCCACCTGCCCTGCAAATAGAAGCCGTCCAGCAGTACTCTGCAGACAGGACTCCTTGAGCAACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCAGTTGTCATGCTGGATGTAGCAGTCACTTGTCCTTTCTCAGGGAAAGCTTGCACGACCAGGCCCTaGGCCAACATGCTCTGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: FPVVMLDVAVTCPFSGKACTTRP*ANMLCA Trigger: AGCGCAGAGCATGTTGGCCAAGGGCCTGGTCGTGCA...AGCTTTCCCTGAGAAAGGACAAGTGACTGCTACATCCAGCATGACAACTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR TCA 72 bp | CTTAACACTGGATGGAGCGGGCCAAGGGCCGCTCTGTaGAAAGAGAGGTACACGTGGGTAAAGAGAAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LNTGWSGPRAAL*KERYTWVKRRK Trigger: CTTCCTTCTCTTTACCCACGTGTACCTCTCTTTTCACAGAGCGGCCCTTGGCCCGCTCCATCCAGTGTTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR TCA 72 bp | AACTTTGTCAACTGGCCATTCGCACAAGGGGCACTGTaGAGGAAGCACCTCCTGCAGCTGTCCATAGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: NFVNWPFAQGAL*RKHLLQLSIDP Trigger: AGGGTCTATGGACAGCTGCAGGAGGTGCTTCCTTCACAGTGCCCCTTGTGCGAATGGCCAGTTGACAAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR TCA 72 bp | CAATTTCACGGATTCCAGCGCTTGAGGCATGATTGGTaGATGCTTCTCCCTACCCTACCTCCCCATCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QFHGFQRLRHDW*MLLPTLPPHPR Trigger: CCTGGGATGGGGAGGTAGGGTAGGGAGAAGCATTCACCAATCATGCCTCAAGCGCTGGAATCCGTGAAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| 3UTR GCA 72 bp | AACAGAAACTTGGCCAGGCAGGCGTGGCAGGCCACCTaGAGCTCTGAAAAATACAAGTCAGCAGTCTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NRNLARQAWQAT*SSEKYKSAVSQ Trigger: CTGAGAGACTGCTGACTTGTATTTTTCAGAGCTGCAGGTGGCCTGCCACGCCTGCCTGGCCAAGTTTCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| 3UTR GCA 72 bp | CTGTTTGTTGCTCAAGGAGTCCTGTCTGCAGAGTACTaGTGGACGGCTTCTATTTGCAGGGCAGGTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LFVAQGVLSAEY*WTASICRAGGK Trigger: CTTCCCACCTGCCCTGCAAATAGAAGCCGTCCAGCAGTACTCTGCAGACAGGACTCCTTGAGCAACAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR GCA 72 bp | TCCTTCCGGTCTGTTTGTTGCTCAAGGAGTCCTGTCTaGAGAGTACTGCTGGACGGCTTCTATTTGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SFRSVCCSRSPV*RVLLDGFYLQG Trigger: GCCCTGCAAATAGAAGCCGTCCAGCAGTACTCTGCAGACAGGACTCCTTGAGCAACAAACAGACCGGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR CCA 72 bp | CATACACACACACACTCACAGTCACACAAGGCATCATaGCCTCCATCTCACCGCACCCTCAGGGTCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHSQSHKAS*PPSHRTLRVSV Trigger: TACAGAGACCCTGAGGGTGCGGTGAGATGGAGGCCATGATGCCTTGTGTGACTGTGAGTGTGTGTGTGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| 3UTR CCA 72 bp | TGGACGGCTTCTATTTGCAGGGCAGGTGGGAAGGCCTaGTCTTGGGATGAGAGCTGTGAAAGTTTCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WTASICRAGGKA*SWDESCESFCC Trigger: ACAGCAGAAACTTTCACAGCTCTCATCCCAAGACCAGGCCTTCCCACCTGCCCTGCAAATAGAAGCCGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR TCA 72 bp | CCCATACAACACTGGTCACTGTCATCACCCAAGGGCTaGTGGCGTGTGTGTCATCCAAGGCTCCATGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: PIQHWSLSSPKG*WRVCHPRLHEI Trigger: GATTTCATGGAGCCTTGGATGACACACACGCCATCAGCCCTTGGGTGATGACAGTGACCAGTGTTGTATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| 3UTR TCA 72 bp | GGGTCACACAAAGCGGAGGCAAAGGCTGTCCAGCTTTaGACTCTAGAGTCTACTTCCTCCAAGGAAGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSHKAEAKAVQL*TLESTSSKEDS Trigger: GGAGTCTTCCTTGGAGGAAGTAGACTCTAGAGTTCAAAGCTGGACAGCCTTTGCCTCCGCTTTGTGTGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR TCA 72 bp | ATCCAAGGCTCCATGAAATCTCTTGGGACTTGTCTCTaGCTGGCCAAACCGCTCCCTGACACAAGCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: IQGSMKSLGTCL*LAKPLPDTSSS Trigger: TGAAGAGCTTGTGTCAGGGAGCGGTTTGGCCAGTCAGAGACAAGTCCCAAGAGATTTCATGGAGCCTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| 3UTR TCA 72 bp | TCCATCTTAGAGATGTCACTGTACGGAGCCTCCTCCTaGCTAGAACAGTGGCTGTGTCCTCAGAGAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SILEMSLYGASS*LEQWLCPQREA Trigger: TGCTTCTCTCTGAGGACACAGCCACTGTTCTAGTCAGGAGGAGGCTCCGTACAGTGACATCTCTAAGATGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCCAAGGCTCCATGAAATCTCTTGGGACTTGTCTCTGACTGGCCAAACCGCTCGACTTTGTGCTGGGTaGTGGGTTTTGTGGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HPRLHEISWDLSLTGQTARLCAG*WVLWFV Trigger: AACAAACCACAAAACCCACAACCCAGCACAAAGTCG...AGCGGTTTGGCCAGTCAGAGACAAGTCCCAAGAGATTTCATGGAGCCTTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| 3UTR TCA 72 bp | CCTGGCTCGAGGAAGCCCCCTTTTCCAGAAGAGATGTaGAACAAGACATACAATTTCACGGATTCCAGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: PGSRKPPFPEEM*NKTYNFTDSSA Trigger: AGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATCTCTTCTGGAAAAGGGGGCTTCCTCGAGCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| 3UTR CCA 72 bp | GTCACAGTACTAGTGACTGGGCGAGAAGGGTATATCTaGCCTTGTGTGAAACTTTGTCAACTGGCCATTCGC | + |
|
Preference number: 3 (lower is better) Translates to: VTVLVTGREGYI*PCVKLCQLAIR Trigger: GCGAATGGCCAGTTGACAAAGTTTCACACAAGGCCAGATATACCCTTCTCGCCCAGTCACTAGTACTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACCTCCTGCAGCTGTCCATAGACCCTCCTGGAGGACAAATGTTCCCAGTTTACAAAGTCTGTTCTTaGAGCTTCACTGAGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KHLLQLSIDPPGGQMFPVYKVCS*SFTEKG Trigger: ACCCTTCTCAGTGAAGCTCAAAGAACAGACTTTGTA...AACTGGGAACATTTGTCCTCCAGGAGGGTCTATGGACAGCTGCAGGAGGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAACTTGGCCAGGCAAAGAAACAAAATCCATaGTCGACTTTGTGCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: IVHPTLTLGGGEQKLGQAKKQNP*STLCWV Trigger: AACCCAGCACAAAGTCGACAATGGATTTTGTTTCTT...TGCCTGGCCAAGTTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| 3UTR TCA 72 bp | AGATGCCCAGGTCTAGAGAATACAAAGTCTGTTCTTTaGGCTTCACTGAGAAGGGTCAAAGCCCATCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RCPGLENTKSVL*ASLRRVKAHLH Trigger: GTGGAGATGGGCTTTGACCCTTCTCAGTGAAGCTCAAAGAACAGACTTTGTATTCTCTAGACCTGGGCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR CCA 72 bp | ACAGAGAAGAAGAGCCCCAAGTCAATGTACCCTTCTTaGTGTCCAGAAGACAAGGCCTATCTATGTTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TEKKSPKSMYPS*CPEDKAYLCSF Trigger: GAACGAACATAGATAGGCCTTGTCTTCTGGACACCAAGAAGGGTACATTGACTTGGGGCTCTTCTTCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACACGTGGGTAAAGAGAAGGAAGTGTTTTTAATGAGCTCAGAATCAATACATGATGCTTCCTTAAGCTaGTCAGAGAGGTGGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VHVGKEKEVFLMSSESIHDASLS*SERWLR Trigger: TCTCAGCCACCTCTCTGACAAGCTTAAGGAAGCATC...ATGTATTGATTCTGAGCTCATTAAAAACACTTCCTTCTCTTTACCCACGTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR GCA 90 bp | GCGGGGGCAGGGTGGCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTGGCTCGACCTGGCAGGAGGTGGTaGCTCCCCAGGGCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGAGWRKSFVVSGLSLARPGRRW*LPRALP Trigger: GGGCAGGGCCCTGGGGAGGCACCACCTCCTGCCAGG...TCGAGCCAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGCCACCCTGCCCCCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGGTGGCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTGGCTCGAGGAAGCCCCCCAAGCCCGCCTTaGCCTGCCGGTGACTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: AGWRKSFVVSGLSLARGSPPSPP*PAGDSR Trigger: TCGTGAGTCACCGGCAGGCCAAGGCGGGCTTGGGGG...GCTTCCTCGAGCCAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGCCACCCTGC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR CCA 90 bp | CGCAAGGCCAAGGGCGGGGGCAGGGTGGCGCAAGAGCTTCGTTGTCTCGGGGCTAGGTCCTTTCCCACCTaGCAGGAGGTGGTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKAKGGGRVAQELRCLGARSFPT*QEVVPP Trigger: GGGAGGCACCACCTCCTGCCAGGTGGGAAAGGACCT...AGCCCCGAGACAACGAAGCTCTTGCGCCACCCTGCCCCCGCCCTTGGCCTTGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR TCA 90 bp | CCAAACCGCTCCCTGACACAAGCTCTTCAGGCACCTCCGATGGCGGCCCGGCACCAGCCCCGCACCACTTaGTGGACGGGATCCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PNRSLTQALQAPPMAARHQPRTT*WTGSPL Trigger: GAGTGGGGATCCCGTCCATCAAGTGGTGCGGGGCTG...GTGCCGGGCCGCCATCGGAGGTGCCTGAAGAGCTTGTGTCAGGGAGCGGTTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | AGCGCAAGGCCAAGGGCGGGGGCAGGGTGGCGCAAGAGCTTCGTTGTCTCGGGGGTCACTCTGGCCTTATaGGTCAGGGCCTGCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SARPRAGAGWRKSFVVSGVTLAL*VRACPV Trigger: GACAGGGCAGGCCCTGACTCATAAGGCCAGAGTGAC...CCCCGAGACAACGAAGCTCTTGCGCCACCCTGCCCCCGCCCTTGGCCTTGCGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR GCA 90 bp | CGCTCCCTGACACAAGCTCTTCAGGCACCTCCGATGGCGGCCCGGCACGTGGTGCTGACGCTTGGTGGCTaGTTTGAGGCCCTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSLTQALQAPPMAARHVVLTLGG*FEALPG Trigger: CCCTGGCAGGGCCTCAAAGCAGCCACCAAGCGTCAG...CACCACGTGCCGGGCCGCCATCGGAGGTGCCTGAAGAGCTTGTGTCAGGGAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | AGCGCAAGGCCAAGGGCGGGGGCAGGGTGGCGCAAGAGCTTCGTTGTCTCGGGGACAAAGAAGCCACTCTaGCAGGGTCCAGGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SARPRAGAGWRKSFVVSGTKKPL*QGPGWP Trigger: TGGCCAGCCTGGACCCTGTCAGAGTGGCTTCTTTGT...CCCCGAGACAACGAAGCTCTTGCGCCACCCTGCCCCCGCCCTTGGCCTTGCGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR GCA 90 bp | GTGGCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTGGCTCGAGGAAGCCCCCTCTGACGCTTGGTGGCTaGTTTGAGGCCCTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAQELRCLGAEPGSRKPPLTLGG*FEALPG Trigger: CCCTGGCAGGGCCTCAAAGCAGCCACCAAGCGTCAG...AGGGGGCTTCCTCGAGCCAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR GCA 90 bp | CCAAACCGCTCCCTGACACAAGCTCTTCAGGCACCTCCGATGGCGGCCCGGCACCGGAGGGGTAGCCTTTaGAGAGGACCTCGATTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PNRSLTQALQAPPMAARHRRGSL*RGPRLA Trigger: CGCCAATCGAGGTCCTCTGCAAAGGCTACCCCTCCG...GTGCCGGGCCGCCATCGGAGGTGCCTGAAGAGCTTGTGTCAGGGAGCGGTTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR CCA 90 bp | GCGGGGGCAGGGTGGCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTGGCTCGACTGTCTATGCCAAGGTaGCTGGAGACGAGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGAGWRKSFVVSGLSLARLSMPR*LETRGS Trigger: AGAACCCCTCGTCTCCAGCCACCTTGGCATAGACAG...TCGAGCCAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGCCACCCTGCCCCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGGTGGCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTGGCTCGAGGAAGCCCCACCAGGTCACTCTaGCCTTATGAGTCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGWRKSFVVSGLSLARGSPTRSL*PYESGP Trigger: AGGCCCTGACTCATAAGGCCAGAGTGACCTGGTGGG...GCTTCCTCGAGCCAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGCCACCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR TCA 90 bp | GCTGGACGGCTTCTATTTGCAGGGCAGGTGGGAAGGCCTGGTCTTGGGATGAGACAGCCCCGCACCACTTaGTGGACGGGATCCCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: AGRLLFAGQVGRPGLGMRQPRTT*WTGSPL Trigger: GAGTGGGGATCCCGTCCATCAAGTGGTGCGGGGCTG...TCTCATCCCAAGACCAGGCCTTCCCACCTGCCCTGCAAATAGAAGCCGTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGCGATGAAGCTGGCCACGTGGTGACAGGGTCACACAAAGCGGAGGCAAAGTCGTTGTCTCGGGGCTaGGCCTGGCTCGAGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGDEAGHVVTGSHKAEAKSLSRG*AWLEEA Trigger: GGCTTCCTCGAGCCAGGCTCAGCCCCGAGACAACGA...CTTTGCCTCCGCTTTGTGTGACCCTGTCACCACGTGGCCAGCTTCATCGCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR GCA 90 bp | CGGCACGTGGTGGCCGGTGGCGAGAACAGGTGGCTGGCATGTGACCCAGTGTCCAGGCATAGCGGGCAGTaGCGGTCAGGTTCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHVVAGGENRWLACDPVSRHSGQ*RSGSCF Trigger: AAAACAAGAACCTGACCGGCACTGCCCGCTATGCCT...GGACACTGGGTCACATGCCAGCCACCTGTTCTCGCCACCGGCCACCACGTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTGGCTCGAGGAAGCCCCAGGCATAGCGGGCAGTaGCGGTCAGGTTCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GWRKSFVVSGLSLARGSPRHSGQ*RSGSCF Trigger: AAAACAAGAACCTGACCGGCACTGCCCGCTATGCCT...GGGGCTTCCTCGAGCCAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR GCA 90 bp | TTAGCCCTGACCCAGGGTCCTACTCAGAAGTCAGGCCTGGGAAGAGGGGTGACCGCGGACCCTCGCAACTaGCCCATCCTCTCTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LALTQGPTQKSGLGRGVTADPRN*PILSSR Trigger: ACGGGAAGAGAGGATGGGGCAGTTGCGAGGGTCCGC...GGTCACCCCTCTTCCCAGGCCTGACTTCTGAGTAGGACCCTGGGTCAGGGCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGGTGGCAAGGACTCTATGCCCTGAGGGATGTGGAAGTCATTGTCCACCCCGGTAGCCCCTGTAGGTaGGCCAGGGGGCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RWWQGLYALRDVEVIVHPGSPCR*ARGQGS Trigger: AGAGCCCTGCCCCCTGGCCCACCTACAGGGGCTACC...GGGGTGGACAATGACTTCCACATCCCTCAGGGCATAGAGTCCTTGCCACCACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | TTAGAGGAGTGTTGGCAGCCTTCAGGTCGGGAGCAGTGGGCAAGGCAAGGGAACCCGCCCAGTGAGGTCTaGGGAGGAGACATTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEECWQPSGREQWARQGNPPSEV*GGDIGR Trigger: CCTGCCAATGTCTCCTCCTCAGACCTCACTGGGCGG...GTTCCCTTGCCTTGCCCACTGCTCCCGACCTGAAGGCTGCCAACACTCCTCTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | GCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTGGCTCGAGGAAGCCCCCTTTTGCCTTGGCCTGCCGGTaGCTCACGAATTTGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: AQELRCLGAEPGSRKPPFALACR*LTNLSM Trigger: CATGCTCAAATTCGTGAGTCACCGGCAGGCCAAGGC...AAAAGGGGGCTTCCTCGAGCCAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR CCA 90 bp | CGCTCCCTGACACAAGCTCTTCAGGCACCTCCGATGGCGGCCCGGCACGTGGTGAACTTGCTCTCGATGTaGAGCTGGGGATGTTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLTQALQAPPMAARHVVNLLSM*SWGCFV Trigger: GACGAAACATCCCCAGCTCCACATCGAGAGCAAGTT...CACCACGTGCCGGGCCGCCATCGGAGGTGCCTGAAGAGCTTGTGTCAGGGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR CCA 90 bp | ACATGCTCTGCGCTAGAAGGAGCTTCGATGCCCACCTCTCACTCCAGTCCCAGAAGGGCGGGGGCAGGGTaGCGCAAGAGCTTCGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TCSALEGASMPTSHSSPRRAGAG*RKSFVV Trigger: GACAACGAAGCTCTTGCGCCACCCTGCCCCCGCCCT...TCTGGGACTGGAGTGAGAGGTGGGCATCGAAGCTCCTTCTAGCGCAGAGCATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| 3UTR CAA 72 bp | GGTTTGTCCCCAAGGTCCCCAGCCTGTGAGGCTTCCTaGGAGAACAGGCTCAGGCCACTGTTTGGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GLSPRSPACEAS*ENRLRPLFGPT Trigger: TGTGGGCCCAAACAGTGGCCTGAGCCTGTTCTCCAAGGAAGCCTCACAGGCTGGGGACCTTGGGGACAAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR TCA 90 bp | GCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTGGCTCGAGGAAGCCCCCTTTTGGGAGCGGCAGAAGTTaGGGTATGTTGAGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AQELRCLGAEPGSRKPPFGSGRS*GMLRTR Trigger: CCGAGTTCTCAACATACCTCAACTTCTGCCGCTCCC...AAAAGGGGGCTTCCTCGAGCCAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR GCA 90 bp | ACATGCTCTGCGCTAGAAGGAGCTTCGATGCCCACCTCTCACTCCAGTCCCAGACGGAGGGGTAGCCTTTaGAGAGGACCTCGATTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TCSALEGASMPTSHSSPRRRGSL*RGPRLA Trigger: CGCCAATCGAGGTCCTCTGCAAAGGCTACCCCTCCG...TCTGGGACTGGAGTGAGAGGTGGGCATCGAAGCTCCTTCTAGCGCAGAGCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR GCA 90 bp | GACCAGGATGCTCAGGGAAGGGGATTCTGGGAAAGCCCCATACAACACTGGTCAAGCCGGGAGACCTCTTaGCGCCCAGTGAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DQDAQGRGFWESPIQHWSSRETS*RPVRSE Trigger: CTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGCT...TGACCAGTGTTGTATGGGGCTTTCCCAGAATCCCCTTCCCTGAGCATCCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | TTAGCCCTGACCCAGGGTCCTACTCAGAAGTCAGGCCTGGGAAGAGGGGTGACCGGGCTGCACCGAATTTaGGCATGTTCCAGTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LALTQGPTQKSGLGRGVTGLHRI*ACSSRR Trigger: TCTTCGACTGGAACATGCTCAAATTCGGTGCAGCCC...GGTCACCCCTCTTCCCAGGCCTGACTTCTGAGTAGGACCCTGGGTCAGGGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | ATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAACTTGGCCAGGCACTCTCGGTCGGCCCGTaGGATCGCTCTGGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IVHPTLTLGGGEQKLGQALSVGP*DRSGRS Trigger: ACTTCTCCCAGAGCGATCTCACGGGCCGACCGAGAG...TGCCTGGCCAAGTTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCTGCAGCTCTGAAAAATACAAGTCAGCAGTCTCTCAGTCAGTCTCTCAGCAGGGGGCAGGGCTCTaGTCGCGGACCCTCGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ATCSSEKYKSAVSQSVSQQGAGL*SRTLAT Trigger: AGTTGCGAGGGTCCGCGACCAGAGCCCTGCCCCCTG...CTGAGAGACTGACTGAGAGACTGCTGACTTGTATTTTTCAGAGCTGCAGGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCATGCATACACACACACACTCACAGTCACAGCTTGGTGGCTGCTTTaGGGCCCTGCCAGGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSHAYTHTLTVTAWWLL*GPARAG Trigger: CCCTGCCCTGGCAGGGCCTCAAAGCAGCCACCAAGC...TGTGACTGTGAGTGTGTGTGTGTATGCATGAGAGAGAGAGAGAGAGAGAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGGGAAGGGGATTCTGGGAAAGCCCCATACAACACTGGTCACTGTCATCCTCCAAAGGAGCCACTaGCGATCTTTCGGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSGKGILGKPHTTLVTVILQRSH*RSFGPG Trigger: GCCTGGGCCGAAAGATCGGCAGTGGCTCCTTTGGAG...GATGACAGTGACCAGTGTTGTATGGGGCTTTCCCAGAATCCCCTTCCCTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGGCCCACAGAGAAGAAGAGCCCCAAGTCAATGTACCCTTCTTGGTGTCCACTGACGCTTGGTGGCTaGTTTGAGGCCCTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FGPTEKKSPKSMYPSWCPLTLGG*FEALPG Trigger: CCCTGGCAGGGCCTCAAAGCAGCCACCAAGCGTCAG...TGGACACCAAGAAGGGTACATTGACTTGGGGCTCTTCTTCTCTGTGGGCCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCCCTGACCCAGGGTCCTACTCAGAAGTCAGGCCTGGGAAGAGGGGTGACCCCCGTGAGATCGCTCTaGGAGAAGTATTGCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LALTQGPTQKSGLGRGVTPVRSL*EKYCQF Trigger: AAACTGGCAATACTTCTCCCAGAGCGATCTCACGGG...GGTCACCCCTCTTCCCAGGCCTGACTTCTGAGTAGGACCCTGGGTCAGGGCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| 3UTR CAA 72 bp | TGTCCTCAGAGAGAAGCAGCTGGGGATTCCAGTCCCTaGGGGGTGGAACACGGGAGGTCATTCCAAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CPQREAAGDSSP*GVEHGRSFQGQ Trigger: TTGACCTTGGAATGACCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCCCAGCTGCTTCTCTCTGAGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGGATGCTCAGGGAAGGGGATTCTGGGAAAGCCCCATACAACACTGGTCAATCCGCTCGTACTTCTaGCGCTTGGTGGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DQDAQGRGFWESPIQHWSIRSYF*RLVAAL Trigger: CAAAGCAGCCACCAAGCGTCAGAAGTACGAGCGGAT...TGACCAGTGTTGTATGGGGCTTTCCCAGAATCCCCTTCCCTGAGCATCCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAGCTTCGATGCCCACCTCTCACTCCAGTCCCAGACAGAAAAGCCACAGAGATCCGCTCGTACTTCTaGCGCTTGGTGGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KELRCPPLTPVPDRKATEIRSYF*RLVAAL Trigger: CAAAGCAGCCACCAAGCGTCAGAAGTACGAGCGGAT...CTCTGTGGCTTTTCTGTCTGGGACTGGAGTGAGAGGTGGGCATCGAAGCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATTGGCCACCTGGCAGGAGGTaGTGCCTCCCCAGGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DVKQDIQFHGFQRLRHDWPPGRR*CLPRAL Trigger: CAGGGCCCTGGGGAGGCACCACCTCCTGCCAGGTGG...CCAATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| 3UTR CAA 72 bp | GCCCTGAGGGATGTGGAAGTCATTGTCCACCCCACCTaGACTTTAGGAGGAGGGGAACAGAAACTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALRDVEVIVHPT*TLGGGEQKLGQ Trigger: CTGGCCAAGTTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTCCACATCCCTCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | AAGCACCTCCTGCAGCTGTCCATAGACCCTCCTGGAGGACAAATGTTCCCAGTTGGGAGCGGCAGAAGTTaGGGTATGTTGAGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KHLLQLSIDPPGGQMFPVGSGRS*GMLRTR Trigger: CCGAGTTCTCAACATACCTCAACTTCTGCCGCTCCC...AACTGGGAACATTTGTCCTCCAGGAGGGTCTATGGACAGCTGCAGGAGGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR TCA 90 bp | GATGTGGAAGTCATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAACCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: DVEVIVHPTLTLGGGEQKPLAAQ*GLRRRH Trigger: ATGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGG...TTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTCCACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGATGGTCTTGGCGATGAAGCTGGCCACGTGGTGACAGGGTCACACAAAAGGCATAGCGGGCAGTaGCGGTCAGGTTCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SADGLGDEAGHVVTGSHKRHSGQ*RSGSCF Trigger: AAAACAAGAACCTGACCGGCACTGCCCGCTATGCCT...TTTGTGTGACCCTGTCACCACGTGGCCAGCTTCATCGCCAAGACCATCTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTAGTGAATGAAAGTCAGCACTATGTGGCCAGGGGCTATGACAGAGGGATACTCCACCGGCCTATCTaGGGGTCCTTGGGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLVNESQHYVARGYDRGILHRPI*GSLGAQ Trigger: CTGGGCACCCAAGGACCCCCAGATAGGCCGGTGGAG...TATCCCTCTGTCATAGCCCCTGGCCACATAGTGCTGACTTTCATTCACTAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR TCA 90 bp | TCACCCTGCCACTCCGCAGGATGCTTCCTTAAGCTTGTCAGAGAGGTGGCTGAGGACCTCGATTGGCGTTaGCATCTTCTTCTCGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPCHSAGCFLKLVREVAEDLDWR*HLLLAN Trigger: ATTAGCGAGAAGAAGATGTCAACGCCAATCGAGGTC...CTCAGCCACCTCTCTGACAAGCTTAAGGAAGCATCCTGCGGAGTGGCAGGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR TCA 90 bp | GGATGTGGAAGTCATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAGGGAGCGGCAGAAGTTaGGGTATGTTGAGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCGSHCPPHLDFRRRGTEGSGRS*GMLRTR Trigger: CCGAGTTCTCAACATACCTCAACTTCTGCCGCTCCC...TTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTCCACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGTTGTCATGCTGGATGTAGCAGTCACTTGTCCTTTCTCAGGGAAAGCTCTCCAAAGGAGCCACTaGCGATCTTTCGGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPVVMLDVAVTCPFSGKALQRSH*RSFGPG Trigger: GCCTGGGCCGAAAGATCGGCAGTGGCTCCTTTGGAG...AGCTTTCCCTGAGAAAGGACAAGTGACTGCTACATCCAGCATGACAACTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGTTTGGGCCCACAGAGAAGAAGAGCCCCAAGTCAATGTACCCTTCTTGGCACCAGAGGCAATGTTaGCACCCAGGTAGATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLFGPTEKKSPKSMYPSWHQRQC*HPGRCL Trigger: GAGACATCTACCTGGGTGCCAACATTGCCTCTGGTG...CCAAGAAGGGTACATTGACTTGGGGCTCTTCTTCTCTGTGGGCCCAAACAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAAAATACAAGTCAGCAGTCTCTCAGTCAGTCTCTCAGTCAGTCTCTCAGTTGCGGGAGGCTGGAGTaGAAGCCACAGGCTCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKNTSQQSLSQSLSQSLSCGRLE*KPQARL Trigger: CAGCCGAGCCTGTGGCTTCCACTCCAGCCTCCCGCA...ACTGAGAGACTGACTGAGAGACTGACTGAGAGACTGCTGACTTGTATTTTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| 3UTR CAA 72 bp | GGTCATTCCAAGGTCAAGTGGGTCCTTCCGGTCTGTTaGTTGCTCAAGGAGTCCTGTCTGCAGAGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHSKVKWVLPVC*LLKESCLQSTA Trigger: AGCAGTACTCTGCAGACAGGACTCCTTGAGCAACAAACAGACCGGAAGGACCCACTTGACCTTGGAATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGGGAAGGGGATTCTGGGAAAGCCCCATACAACACTGGTCACTGTCATCTCACACATTCGAGCTTaGTGGCTACTTCCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSGKGILGKPHTTLVTVISHIRA*WLLPHQ Trigger: CTGGTGAGGAAGTAGCCATCAAGCTCGAATGTGTGA...GATGACAGTGACCAGTGTTGTATGGGGCTTTCCCAGAATCCCCTTCCCTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | CATCCAAGGCTCCATGAAATCTCTTGGGACTTGTCTCTGACTGGCCAAACCGCTGAGAAACCCTGCCGGTaGAAGAGATTTCGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPRLHEISWDLSLTGQTAEKPCR*KRFRKS Trigger: GCTCTTCCGAAATCTCTTTCACCGGCAGGGTTTCTC...AGCGGTTTGGCCAGTCAGAGACAAGTCCCAAGAGATTTCATGGAGCCTTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR GCA 90 bp | GGATGTGGAAGTCATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAACTCTGTGGAGTCTCATaGTCACCTTCCTCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCGSHCPPHLDFRRRGTELCGVS*SPSSLG Trigger: ACCGAGAGAGGAAGGTGAGCATGAGACTCCACAGAG...TTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTCCACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR CCA 90 bp | CATCCAAGGCTCCATGAAATCTCTTGGGACTTGTCTCTGACTGGCCAAACCGCTCACCAGAGGCAATGTTaGCACCCAGGTAGATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPRLHEISWDLSLTGQTAHQRQC*HPGRCL Trigger: GAGACATCTACCTGGGTGCCAACATTGCCTCTGGTG...AGCGGTTTGGCCAGTCAGAGACAAGTCCCAAGAGATTTCATGGAGCCTTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGGGAAGGGGATTCTGGGAAAGCCCCATACAACACTGGTCACTGTCATCGACCTCGATTGGCGTTaGCATCTTCTTCTCGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CSGKGILGKPHTTLVTVIDLDWR*HLLLAN Trigger: ATTAGCGAGAAGAAGATGTCAACGCCAATCGAGGTC...GATGACAGTGACCAGTGTTGTATGGGGCTTTCCCAGAATCCCCTTCCCTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
||
| CDS-3UTR GCA 90 bp | GATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATTGGCGGAGGGGTAGCCTTTaGAGAGGACCTCGATTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DVKQDIQFHGFQRLRHDWRRGSL*RGPRLA Trigger: CGCCAATCGAGGTCCTCTGCAAAGGCTACCCCTCCG...CCAATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR CCA 90 bp | GTACACGTGGGTAAAGAGAAGGAAGTGTTTTTAATGAGCTCAGAATCAATACATCTATCTGGGGGTCCTTaGGTGCCCAGGGGCGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHVGKEKEVFLMSSESIHLSGGP*VPRGAG Trigger: CCCGGCGCCCCTGGGCACCCAAGGACCCCCAGATAG...ATGTATTGATTCTGAGCTCATTAAAAACACTTCCTTCTCTTTACCCACGTGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGGAAAGCTGGTGACTAAGAAGCAAGCATCCATTTCCAAATACTTTAGTTCAGAACTGGGGCCCTaGAGTCCAGACCACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQGKLVTKKQASISKYFSSELGP*SPDHRP Trigger: TGGCCTGTGGTCTGGACTCCAGGGCCCCAGTTCTGA...ACTAAAGTATTTGGAAATGGATGCTTGCTTCTTAGTCACCAGCTTTCCCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR CCA 90 bp | AGAGATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATCTATGCCAAGGTGGCTaGAGACGAGGGGTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDVKQDIQFHGFQRLRHDLCQGG*RRGVLG Trigger: TCCCAGAACCCCTCGTCTCCAGCCACCTTGGCATAG...ATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR TCA 90 bp | AGAGATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATATCCGCTCGTACTTCTaGCGCTTGGTGGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RDVKQDIQFHGFQRLRHDIRSYF*RLVAAL Trigger: CAAAGCAGCCACCAAGCGTCAGAAGTACGAGCGGAT...ATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR TCA 90 bp | ATAGAAGTCAGTGCCCCAAGTTACACAAATGTCTGGCTCCATCTTAGAGATGTCGAGAAACCCTGCCGGTaGAAGAGATTTCGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IEVSAPSYTNVWLHLRDVEKPCR*KRFRKS Trigger: GCTCTTCCGAAATCTCTTTCACCGGCAGGGTTTCTC...GACATCTCTAAGATGGAGCCAGACATTTGTGTAACTTGGGGCACTGACTTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR GCA 90 bp | AGAGATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATGACATGCCCTGTCTATaGCAAGGTGGCTGGAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: RDVKQDIQFHGFQRLRHDDMPCL*QGGWRR Trigger: TCGTCTCCAGCCACCTTGGCATAGACAGGGCATGTC...ATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR CCA 90 bp | GATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATTGGGTACACAAGAGAGACTaGAGCCCACACCAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DVKQDIQFHGFQRLRHDWVHKRD*SPHQVL Trigger: AAGGACCTGGTGTGGGCTCCAGTCTCTCTTGTGTAC...CCAATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR TCA 90 bp | TACCCTTCTTGGTGTCCAGAAGACAAGGCCTATCTATGTTCGTTCTTAACACTGTCACACATTCGAGCTTaGTGGCTACTTCCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: YPSWCPEDKAYLCSFLTLSHIRA*WLLPHQ Trigger: CTGGTGAGGAAGTAGCCATCAAGCTCGAATGTGTGA...CAGTGTTAAGAACGAACATAGATAGGCCTTGTCTTCTGGACACCAAGAAGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR TCA 90 bp | AGAGATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATGAGAAACCCTGCCGGTaGAAGAGATTTCGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDVKQDIQFHGFQRLRHDEKPCR*KRFRKS Trigger: GCTCTTCCGAAATCTCTTTCACCGGCAGGGTTTCTC...ATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR TCA 90 bp | TCTTGGTGTCCAGAAGACAAGGCCTATCTATGTTCGTTCTTAACACTGGATGGAAGGAAGCCCCGAATTTaGGCATGTTCCAGTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWCPEDKAYLCSFLTLDGRKPRI*ACSSRR Trigger: TCTTCGACTGGAACATGCTCAAATTCGGGGCTTCCT...TCCATCCAGTGTTAAGAACGAACATAGATAGGCCTTGTCTTCTGGACACCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS-3UTR GCA 90 bp | AGAGATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATCCAGGGCCATCCATTTaGCACAGGTACACAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDVKQDIQFHGFQRLRHDPGPSI*HRYTRE Trigger: CTCTCTTGTGTACCTGTGGCAAATGGATGGCCCTGG...ATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS-3UTR CCA 90 bp | ATAGAAGTCAGTGCCCCAAGTTACACAAATGTCTGGCTCCATCTTAGAGATGTCAACTTGCTCTCGATGTaGAGCTGGGGATGTTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IEVSAPSYTNVWLHLRDVNLLSM*SWGCFV Trigger: GACGAAACATCCCCAGCTCCACATCGAGAGCAAGTT...GACATCTCTAAGATGGAGCCAGACATTTGTGTAACTTGGGGCACTGACTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| 3UTR CAA 72 bp | CACAGAGAAGAAGAGCCCCAAGTCAATGTACCCTTCTaGGTGTCCAGAAGACAAGGCCTATCTATGTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HREEEPQVNVPF*VSRRQGLSMFV Trigger: AACGAACATAGATAGGCCTTGTCTTCTGGACACCAAGAAGGGTACATTGACTTGGGGCTCTTCTTCTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| CDS-3UTR TCA 90 bp | AGAGATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATGACCTCGATTGGCGTTaGCATCTTCTTCTCGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RDVKQDIQFHGFQRLRHDDLDWR*HLLLAN Trigger: ATTAGCGAGAAGAAGATGTCAACGCCAATCGAGGTC...ATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| 3UTR CAA 72 bp | GGCAAGGGAACAAGAATCCTCAGTGCTAACGAGGTCTaGTCTTTTTGCCATTGGCAAAATAAATCAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKGTRILSANEV*SFCHWQNKSKK Trigger: TTTCTTTGATTTATTTTGCCAATGGCAAAAAGACAAGACCTCGTTAGCACTGAGGATTCTTGTTCCCTTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS CCA 90 bp | AGGCTCGGCTGCACTTCGGAGTCGGTTGGCGGTAGCCCCTGTAGGTaGGCCAGGGGGCAGGGCTCTGGTCGCGGACCCTCGCAACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLGCTSESVGGSPCR*ARGQGSGRGPSQLP Trigger: GGGCAGTTGCGAGGGTCCGCGACCAGAGCCCTGCCCCCTGGCCCACCTACAGGGGCTACCGCCAACCGACTCCGAAGTGCAGCCGAGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS-3UTR CAA 90 bp | GGGTGGCGCAAGAGCTTCGTTGTCTCGGGGCTGAGCCTGGCTCGAGGAAGCCCCCGCTTGGTGGCTGCTTaGAGGCCCTGCCAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWRKSFVVSGLSLARGSPRLVAA*RPCQGR Trigger: CCTGCCCTGGCAGGGCCTCAAAGCAGCCACCAAGCG...GGGGCTTCCTCGAGCCAGGCTCAGCCCCGAGACAACGAAGCTCTTGCGCCACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS GCA 90 bp | GTAGGTGGGCCAGGGGGCAGGGCTCTGGTCGCGGACCCTCGCAACTaGCCCATCCTCTCTTCCCGTTCGTGCTCCCGTCTTTCCCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGGPGGRALVADPRN*PILSSRSCSRLSRS Trigger: AGACCGGGAAAGACGGGAGCACGAACGGGAAGAGAGGATGGGGCAGTTGCGAGGGTCCGCGACCAGAGCCCTGCCCCCTGGCCCACCTAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS-3UTR CAA 90 bp | CGCAAGGCCAAGGGCGGGGGCAGGGTGGCGCAAGAGCTTCGTTGTCTCGGGGCTGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RKAKGGGRVAQELRCLGAVISTA*LNAQVG Trigger: ACCCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...AGCCCCGAGACAACGAAGCTCTTGCGCCACCCTGCCCCCGCCCTTGGCCTTGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS GCA 90 bp | CTGGTCGCGGACCCTCGCAACTGCCCCATCCTCTCTTCCCGTTCGTaGTCCCGTCTTTCCCGGTCTACATCCTCGGGATTCCGGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVADPRNCPILSSRS*SRLSRSTSSGFRAA Trigger: TGCAGCCCGGAATCCCGAGGATGTAGACCGGGAAAGACGGGAGCACGAACGGGAAGAGAGGATGGGGCAGTTGCGAGGGTCCGCGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS GCA 90 bp | AGTTTGTTGGATGCGGGAGGCTGGAGTGGAAGCCACAGGCTCGGCTaGACTTCGGAGTCGGTTGGCGGTAGCCCCTGTAGGTGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLDAGGWSGSHRLG*TSESVGGSPCRWAR Trigger: CCTGGCCCACCTACAGGGGCTACCGCCAACCGACTCCGAAGTGCAGCCGAGCCTGTGGCTTCCACTCCAGCCTCCCGCATCCAACAAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS TCA 90 bp | CGCTTGTCTGTGAGGCTGCAAGCCGGGAGACCTCTTGCCGCCCAGTaGGGTCTGAGGAGGAGACATTGGCAGGGGCACCTCTGTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RLSVRLQAGRPLAAQ*GLRRRHWQGHLCGV Trigger: GACTCCACAGAGGTGCCCCTGCCAATGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGCTTGCAGCCTCACAGACAAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS-3UTR CAA 90 bp | CCAAACCGCTCCCTGACACAAGCTCTTCAGGCACCTCCGATGGCGGCCCGGCACGCATCGCGGTACTTCTaGGCCAGGCCGAAGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PNRSLTQALQAPPMAARHASRYF*ARPKSM Trigger: CATTGACTTCGGCCTGGCCAAGAAGTACCGCGATGC...GTGCCGGGCCGCCATCGGAGGTGCCTGAAGAGCTTGTGTCAGGGAGCGGTTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS GCA 90 bp | GGTCTGAGGAGGAGACATTGGCAGGGGCACCTCTGTGGAGTCTCATaGTCACCTTCCTCTCTCGGTCGGCCCGTGAGATCGCTCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLRRRHWQGHLCGVS*SPSSLGRPVRSLWE Trigger: CTCCCAGAGCGATCTCACGGGCCGACCGAGAGAGGAAGGTGAGCATGAGACTCCACAGAGGTGCCCCTGCCAATGTCTCCTCCTCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS CCA 90 bp | GGTCCAGCCAGGGCCATCCATTTGCCACAGGTACACAAGAGAGACTaGAGCCCACACCAGGTCCTTTCCCACCTGGCAGGAGGTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPARAIHLPQVHKRD*SPHQVLSHLAGGGA Trigger: GGCACCACCTCCTGCCAGGTGGGAAAGGACCTGGTGTGGGCTCCAGTCTCTCTTGTGTACCTGTGGCAAATGGATGGCCCTGGCTGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS-3UTR CAA 90 bp | AGCGCAAGGCCAAGGGCGGGGGCAGGGTGGCGCAAGAGCTTCGTTGTCTCGGGGTGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SARPRAGAGWRKSFVVSGCRGPR*ALTSSS Trigger: AGAAGAAGATGTCAACGCCAATCGAGGTCCTCTGCA...CCCCGAGACAACGAAGCTCTTGCGCCACCCTGCCCCCGCCCTTGGCCTTGCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS GCA 90 bp | TCAAATGGCACGCTTGTCTGTGAGGCTGCAAGCCGGGAGACCTCTTaGCGCCCAGTGAGGTCTGAGGAGGAGACATTGGCAGGGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SNGTLVCEAASRETS*RPVRSEEETLAGAP Trigger: AGGTGCCCCTGCCAATGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGCTTGCAGCCTCACAGACAAGCGTGCCATTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS-3UTR CAA 90 bp | CCTCAGAGAGAAGCAGCTGGGGATTCCAGTCCCTTGGGGGTGGAACACGGGAGGGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PQREAAGDSSPLGVEHGRVISTA*LNAQVG Trigger: ACCCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...CCTCCCGTGTTCCACCCCCAAGGGACTGGAATCCCCAGCTGCTTCTCTCTGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| CDS CCA 90 bp | GATCGCTCTGGGAGAAGTATTGCCAGTTTGTTGGATGCGGGAGGCTaGAGTGGAAGCCACAGGCTCGGCTGCACTTCGGAGTCGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DRSGRSIASLLDAGG*SGSHRLGCTSESVG Trigger: GCCAACCGACTCCGAAGTGCAGCCGAGCCTGTGGCTTCCACTCCAGCCTCCCGCATCCAACAAACTGGCAATACTTCTCCCAGAGCGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS CCA 90 bp | GTCTCATGCTCACCTTCCTCTCTCGGTCGGCCCGTGAGATCGCTCTaGGAGAAGTATTGCCAGTTTGTTGGATGCGGGAGGCTGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSCSPSSLGRPVRSL*EKYCQFVGCGRLEW Trigger: CCACTCCAGCCTCCCGCATCCAACAAACTGGCAATACTTCTCCCAGAGCGATCTCACGGGCCGACCGAGAGAGGAAGGTGAGCATGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS GCA 90 bp | AGACAGCTATCAGGGCTGCAGAGGGTCCAGCCAGGGCCATCCATTTaGCACAGGTACACAAGAGAGACTGGAGCCCACACCAGGTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RQLSGLQRVQPGPSI*HRYTRETGAHTRSF Trigger: AAAGGACCTGGTGTGGGCTCCAGTCTCTCTTGTGTACCTGTGGCAAATGGATGGCCCTGGCTGGACCCTCTGCAGCCCTGATAGCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS CCA 90 bp | ACAGGGTCCAGGCTGGCCAGGGAGGCCTCAGAAAGGGCCACCACTTaGGATACGCACAAGAGGAACAGGAGAATACAGACAGCTATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGSRLAREASERATT*DTHKRNRRIQTAIR Trigger: CCTGATAGCTGTCTGTATTCTCCTGTTCCTCTTGTGCGTATCCCAAGTGGTGGCCCTTTCTGAGGCCTCCCTGGCCAGCCTGGACCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS-3UTR CAA 90 bp | ATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAACTTGGCCAGGCATCAGCCCCGCACCACTaGATGGACGGGATCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: IVHPTLTLGGGEQKLGQASAPHH*MDGIPT Trigger: AGTGGGGATCCCGTCCATCAAGTGGTGCGGGGCTGA...TGCCTGGCCAAGTTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS-3UTR CAA 90 bp | TTAGAGGAGTGTTGGCAGCCTTCAGGTCGGGAGCAGTGGGCAAGGCAAGGGAACCGGGCTGCACCGAATTaGAGCATGTTCCAGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LEECWQPSGREQWARQGNRAAPN*SMFQSK Trigger: CTTCGACTGGAACATGCTCAAATTCGGTGCAGCCCG...GTTCCCTTGCCTTGCCCACTGCTCCCGACCTGAAGGCTGCCAACACTCCTCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS TCA 90 bp | ACCTCTGTGGAGTCTCATGCTCACCTTCCTCTCTCGGTCGGCCCGTaGGATCGCTCTGGGAGAAGTATTGCCAGTTTGTTGGATGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSVESHAHLPLSVGP*DRSGRSIASLLDAG Trigger: TCCCGCATCCAACAAACTGGCAATACTTCTCCCAGAGCGATCTCACGGGCCGACCGAGAGAGGAAGGTGAGCATGAGACTCCACAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS-3UTR CAA 90 bp | ATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAACTTGGCCAGGCAGGTCAAATGGCACGCTaGTCTGTGAGGCTGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVHPTLTLGGGEQKLGQAGQMAR*SVRLQA Trigger: GGCTTGCAGCCTCACAGACAAGCGTGCCATTTGACC...TGCCTGGCCAAGTTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS GCA 90 bp | GGATACGCACAAGAGGAACAGGAGAATACAGACAGCTATCAGGGCTaGAGAGGGTCCAGCCAGGGCCATCCATTTGCCACAGGTACACAA | + |
|
Preference number: 5 (lower is better) Translates to: GYAQEEQENTDSYQG*RGSSQGHPFATGTQ Trigger: TTGTGTACCTGTGGCAAATGGATGGCCCTGGCTGGACCCTCTGCAGCCCTGATAGCTGTCTGTATTCTCCTGTTCCTCTTGTGCGTATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS-3UTR CAA 90 bp | GAAGTCATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAACTTGGCGTCATCTCGACGGCTTaGCTCAATGCCCAGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EVIVHPTLTLGGGEQKLGVISTA*LNAQVG Trigger: ACCCACCTGGGCATTGAGCAAAGCCGTCGAGATGAC...GCCAAGTTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS-3UTR CAA 90 bp | CTGAAAAATACAAGTCAGCAGTCTCTCAGTCAGTCTCTCAGTCAGTCTCTCAGTCGCTTGGTGGCTGCTTaGAGGCCCTGCCAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKNTSQQSLSQSLSQSLSRLVAA*RPCQGR Trigger: CCTGCCCTGGCAGGGCCTCAAAGCAGCCACCAAGCG...ACTGAGAGACTGACTGAGAGACTGACTGAGAGACTGCTGACTTGTATTTTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS TCA 90 bp | TGTCTATGCCAAGGTGGCTGGAGACGAGGGGTTCTGGGACCCCTGTaGCGTCATTCACAGTGTCCAGCTCATATCTCCCATTTAATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLCQGGWRRGVLGPL*RHSQCPAHISHLMG Trigger: TCCCATTAAATGGGAGATATGAGCTGGACACTGTGAATGACGTCACAGGGGTCCCAGAACCCCTCGTCTCCAGCCACCTTGGCATAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS-3UTR CAA 90 bp | AGGTGGTGGCAAGGACTCTATGCCCTGAGGGATGTGGAAGTCATTGTCCACCCCTTCACACATTCGAGCTaGATGGCTACTTCCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RWWQGLYALRDVEVIVHPFTHSS*MATSSP Trigger: TGGTGAGGAAGTAGCCATCAAGCTCGAATGTGTGAA...GGGGTGGACAATGACTTCCACATCCCTCAGGGCATAGAGTCCTTGCCACCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS-3UTR CAA 90 bp | GATGTGGAAGTCATTGTCCACCCCACCTTGACTTTAGGAGGAGGGGAACAGAAAAGCAACAGCACCGTCTaGAGGCTGAACTTCCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DVEVIVHPTLTLGGGEQKSNSTV*RLNFRE Trigger: TTCCCGGAAGTTCAGCCTCAAGACGGTGCTGTTGCT...TTTCTGTTCCCCTCCTCCTAAAGTCAAGGTGGGGTGGACAATGACTTCCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS-3UTR CAA 90 bp | TCTCAGGGAAAGCTGGTGACTAAGAAGCAAGCATCCATTTCCAAATACTTTAGTCGCTTGGTGGCTGCTTaGAGGCCCTGCCAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQGKLVTKKQASISKYFSRLVAA*RPCQGR Trigger: CCTGCCCTGGCAGGGCCTCAAAGCAGCCACCAAGCG...ACTAAAGTATTTGGAAATGGATGCTTGCTTCTTAGTCACCAGCTTTCCCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| CDS-3UTR CAA 90 bp | ACTTTAGTGAATGAAAGTCAGCACTATGTGGCCAGGGGCTATGACAGAGGGATAGCATCGCGGTACTTCTaGGCCAGGCCGAAGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TLVNESQHYVARGYDRGIASRYF*ARPKSM Trigger: CATTGACTTCGGCCTGGCCAAGAAGTACCGCGATGC...TATCCCTCTGTCATAGCCCCTGGCCACATAGTGCTGACTTTCATTCACTAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| CDS-3UTR CAA 90 bp | CATCCAAGGCTCCATGAAATCTCTTGGGACTTGTCTCTGACTGGCCAAACCGCTTGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HPRLHEISWDLSLTGQTACRGPR*ALTSSS Trigger: AGAAGAAGATGTCAACGCCAATCGAGGTCCTCTGCA...AGCGGTTTGGCCAGTCAGAGACAAGTCCCAAGAGATTTCATGGAGCCTTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117786.9 |
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| CDS-3UTR CAA 90 bp | GATGTGAAACAAGACATACAATTTCACGGATTCCAGCGCTTGAGGCATGATTGGGCATCGCGGTACTTCTaGGCCAGGCCGAAGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: DVKQDIQFHGFQRLRHDWASRYF*ARPKSM Trigger: CATTGACTTCGGCCTGGCCAAGAAGTACCGCGATGC...CCAATCATGCCTCAAGCGCTGGAATCCGTGAAATTGTATGTCTTGTTTCACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS-3UTR CAA 90 bp | TTCCCAGTTGTCATGCTGGATGTAGCAGTCACTTGTCCTTTCTCAGGGAAAGCTGAGGAAGCCCCGAATTaGAGCATGTTCCAGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPVVMLDVAVTCPFSGKAEEAPN*SMFQSK Trigger: CTTCGACTGGAACATGCTCAAATTCGGGGCTTCCTC...AGCTTTCCCTGAGAAAGGACAAGTGACTGCTACATCCAGCATGACAACTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| CDS-3UTR CAA 90 bp | TTCCCAGTTGTCATGCTGGATGTAGCAGTCACTTGTCCTTTCTCAGGGAAAGCTTGCAGAGGACCTCGATaGGCGTTGACATCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPVVMLDVAVTCPFSGKACRGPR*ALTSSS Trigger: AGAAGAAGATGTCAACGCCAATCGAGGTCCTCTGCA...AGCTTTCCCTGAGAAAGGACAAGTGACTGCTACATCCAGCATGACAACTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| CDS-3UTR CAA 90 bp | GTACACGTGGGTAAAGAGAAGGAAGTGTTTTTAATGAGCTCAGAATCAATACATTCAGCCCCGCACCACTaGATGGACGGGATCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VHVGKEKEVFLMSSESIHSAPHH*MDGIPT Trigger: AGTGGGGATCCCGTCCATCAAGTGGTGCGGGGCTGA...ATGTATTGATTCTGAGCTCATTAAAAACACTTCCTTCTCTTTACCCACGTGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| CDS-3UTR CAA 90 bp | GTACACGTGGGTAAAGAGAAGGAAGTGTTTTTAATGAGCTCAGAATCAATACATTTCACACATTCGAGCTaGATGGCTACTTCCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VHVGKEKEVFLMSSESIHFTHSS*MATSSP Trigger: TGGTGAGGAAGTAGCCATCAAGCTCGAATGTGTGAA...ATGTATTGATTCTGAGCTCATTAAAAACACTTCCTTCTCTTTACCCACGTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| CDS TCA 72 bp | TTGGGTGCCCAGGGGCGCCGGGCACCAGTAAGTGGGTaGGTATGCGGGCCCAGCGCAAGGCCAAGGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGAQGRRAPVSG*VCGPSARPRAG Trigger: CCCCGCCCTTGGCCTTGCGCTGGGCCCGCATACTCACCCACTTACTGGTGCCCGGCGCCCCTGGGCACCCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
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| CDS CCA 72 bp | TGCACTTCGGAGTCGGTTGGCGGTAGCCCCTGTAGGTaGGCCAGGGGGCAGGGCTCTGGTCGCGGACCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CTSESVGGSPCR*ARGQGSGRGPS Trigger: CGAGGGTCCGCGACCAGAGCCCTGCCCCCTGGCCCACCTACAGGGGCTACCGCCAACCGACTCCGAAGTGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
||
| CDS CCA 72 bp | GTCCTTGGGTGCCCAGGGGCGCCGGGCACCAGTAAGTaGGTGAGTATGCGGGCCCAGCGCAAGGCCAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLGCPGAPGTSK*VSMRAQRKAKG Trigger: GCCCTTGGCCTTGCGCTGGGCCCGCATACTCACCCACTTACTGGTGCCCGGCGCCCCTGGGCACCCAAGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122044.8 |
||
| CDS CAA 90 bp | GAGGCTGGAGTGGAAGCCACAGGCTCGGCTGCACTTCGGAGTCGGTaGGCGGTAGCCCCTGTAGGTGGGCCAGGGGGCAGGGCTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EAGVEATGSAALRSR*AVAPVGGPGGRALV Trigger: GACCAGAGCCCTGCCCCCTGGCCCACCTACAGGGGCTACCGCCAACCGACTCCGAAGTGCAGCCGAGCCTGTGGCTTCCACTCCAGCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
||
| CDS CCA 72 bp | AGAGAGACTGGAGCCCACACCAGGTCCTTTCCCACCTaGCAGGAGGTGGTGCCTCCCCAGGGCCCTGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RETGAHTRSFPT*QEVVPPQGPAP Trigger: GGGGGCAGGGCCCTGGGGAGGCACCACCTCCTGCCAGGTGGGAAAGGACCTGGTGTGGGCTCCAGTCTCTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
||
| CDS CAA 72 bp | GTGGAAGCCACAGGCTCGGCTGCACTTCGGAGTCGGTaGGCGGTAGCCCCTGTAGGTGGGCCAGGGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VEATGSAALRSR*AVAPVGGPGGR Trigger: CCTGCCCCCTGGCCCACCTACAGGGGCTACCGCCAACCGACTCCGAAGTGCAGCCGAGCCTGTGGCTTCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
||
| CDS GCA 72 bp | CCAGGGGGCAGGGCTCTGGTCGCGGACCCTCGCAACTaGCCCATCCTCTCTTCCCGTTCGTGCTCCCGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGGRALVADPRN*PILSSRSCSRL Trigger: AAGACGGGAGCACGAACGGGAAGAGAGGATGGGGCAGTTGCGAGGGTCCGCGACCAGAGCCCTGCCCCCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
||
| CDS GCA 72 bp | GACCCTCGCAACTGCCCCATCCTCTCTTCCCGTTCGTaGTCCCGTCTTTCCCGGTCTACATCCTCGGGATTC | + |
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Preference number: 6 (lower is better) Translates to: DPRNCPILSSRS*SRLSRSTSSGF Trigger: GAATCCCGAGGATGTAGACCGGGAAAGACGGGAGCACGAACGGGAAGAGAGGATGGGGCAGTTGCGAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS GCA 72 bp | AGGAGACATTGGCAGGGGCACCTCTGTGGAGTCTCATaGTCACCTTCCTCTCTCGGTCGGCCCGTGAGATCG | + |
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Preference number: 6 (lower is better) Translates to: RRHWQGHLCGVS*SPSSLGRPVRS Trigger: CGATCTCACGGGCCGACCGAGAGAGGAAGGTGAGCATGAGACTCCACAGAGGTGCCCCTGCCAATGTCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS GCA 72 bp | ACGCTTGTCTGTGAGGCTGCAAGCCGGGAGACCTCTTaGCGCCCAGTGAGGTCTGAGGAGGAGACATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TLVCEAASRETS*RPVRSEEETLA Trigger: TGCCAATGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGCTTGCAGCCTCACAGACAAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS GCA 72 bp | CTCGGTCGGCCCGTGAGATCGCTCTGGGAGAAGTATTaGCAGTTTGTTGGATGCGGGAGGCTGGAGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LGRPVRSLWEKY*QFVGCGRLEWK Trigger: CTTCCACTCCAGCCTCCCGCATCCAACAAACTGGCAATACTTCTCCCAGAGCGATCTCACGGGCCGACCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS CCA 72 bp | GGGAGAAGTATTGCCAGTTTGTTGGATGCGGGAGGCTaGAGTGGAAGCCACAGGCTCGGCTGCACTTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GRSIASLLDAGG*SGSHRLGCTSE Trigger: CTCCGAAGTGCAGCCGAGCCTGTGGCTTCCACTCCAGCCTCCCGCATCCAACAAACTGGCAATACTTCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS CCA 72 bp | CCTGTCTATGCCAAGGTGGCTGGAGACGAGGGGTTCTaGGACCCCTGTGACGTCATTCACAGTGTCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: PVYAKVAGDEGF*DPCDVIHSVQL Trigger: GAGCTGGACACTGTGAATGACGTCACAGGGGTCCCAGAACCCCTCGTCTCCAGCCACCTTGGCATAGACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS CAA 90 bp | CAGACAGCTATCAGGGCTGCAGAGGGTCCAGCCAGGGCCATCCATTaGCCACAGGTACACAAGAGAGACTGGAGCCCACACCAGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QTAIRAAEGPARAIH*PQVHKRDWSPHQVL Trigger: AAGGACCTGGTGTGGGCTCCAGTCTCTCTTGTGTACCTGTGGCAAATGGATGGCCCTGGCTGGACCCTCTGCAGCCCTGATAGCTGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS CAA 90 bp | GACAGGGTCCAGGCTGGCCAGGGAGGCCTCAGAAAGGGCCACCACTaGGGATACGCACAAGAGGAACAGGAGAATACAGACAGCTATCAG | + |
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Preference number: 6 (lower is better) Translates to: DRVQAGQGGLRKGHH*GYAQEEQENTDSYQ Trigger: CTGATAGCTGTCTGTATTCTCCTGTTCCTCTTGTGCGTATCCCAAGTGGTGGCCCTTTCTGAGGCCTCCCTGGCCAGCCTGGACCCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS CCA 72 bp | TCACCTTCCTCTCTCGGTCGGCCCGTGAGATCGCTCTaGGAGAAGTATTGCCAGTTTGTTGGATGCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SPSSLGRPVRSL*EKYCQFVGCGR Trigger: CCTCCCGCATCCAACAAACTGGCAATACTTCTCCCAGAGCGATCTCACGGGCCGACCGAGAGAGGAAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS CCA 72 bp | AGGGCCATCCATTTGCCACAGGTACACAAGAGAGACTaGAGCCCACACCAGGTCCTTTCCCACCTGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RAIHLPQVHKRD*SPHQVLSHLAG Trigger: TCCTGCCAGGTGGGAAAGGACCTGGTGTGGGCTCCAGTCTCTCTTGTGTACCTGTGGCAAATGGATGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS CAA 72 bp | TCTCGGTCGGCCCGTGAGATCGCTCTGGGAGAAGTATaGCCAGTTTGTTGGATGCGGGAGGCTGGAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SRSAREIALGEV*PVCWMREAGVE Trigger: TTCCACTCCAGCCTCCCGCATCCAACAAACTGGCAATACTTCTCCCAGAGCGATCTCACGGGCCGACCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS CAA 72 bp | CAGGCTGGCCAGGGAGGCCTCAGAAAGGGCCACCACTaGGGATACGCACAAGAGGAACAGGAGAATACAGAC | + |
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Preference number: 6 (lower is better) Translates to: QAGQGGLRKGHH*GYAQEEQENTD Trigger: GTCTGTATTCTCCTGTTCCTCTTGTGCGTATCCCAAGTGGTGGCCCTTTCTGAGGCCTCCCTGGCCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS TCA 72 bp | CAAGGTGGCTGGAGACGAGGGGTTCTGGGACCCCTGTaGCGTCATTCACAGTGTCCAGCTCATATCTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: QGGWRRGVLGPL*RHSQCPAHISH Trigger: ATGGGAGATATGAGCTGGACACTGTGAATGACGTCACAGGGGTCCCAGAACCCCTCGTCTCCAGCCACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS CCA 72 bp | AGGCTGGCCAGGGAGGCCTCAGAAAGGGCCACCACTTaGGATACGCACAAGAGGAACAGGAGAATACAGACA | + |
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Preference number: 6 (lower is better) Translates to: RLAREASERATT*DTHKRNRRIQT Trigger: TGTCTGTATTCTCCTGTTCCTCTTGTGCGTATCCCAAGTGGTGGCCCTTTCTGAGGCCTCCCTGGCCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156513.3 |
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| CDS TCA 72 bp | CAGGCTTATCATCGAACCGCAGGGAGCGGCAGAAGTTaGGGTATGTTGAGAACTCGGAGGGGTAGCCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: QAYHRTAGSGRS*GMLRTRRGSLC Trigger: GCAAAGGCTACCCCTCCGAGTTCTCAACATACCTCAACTTCTGCCGCTCCCTGCGGTTCGATGATAAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 ENSMUST00000122044.8 ENSMUST00000156513.3 |
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| CDS TCA 72 bp | GAGTCTCATGCTCACCTTCCTCTCTCGGTCGGCCCGTaGGATCGCTCTGGGAGAAGTATTGCCAGTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ESHAHLPLSVGP*DRSGRSIASLL Trigger: CAACAAACTGGCAATACTTCTCCCAGAGCGATCTCACGGGCCGACCGAGAGAGGAAGGTGAGCATGAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 |
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| CDS TCA 72 bp | GGAGCTGGGGATGTTTCGTCTTCACACATTCGAGCTTaGTGGCTACTTCCTCACCAGAGGCAATGTTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: GAGDVSSSHIRA*WLLPHQRQCWH Trigger: GTGCCAACATTGCCTCTGGTGAGGAAGTAGCCATCAAGCTCGAATGTGTGAAGACGAAACATCCCCAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 ENSMUST00000122044.8 ENSMUST00000135519.2 ENSMUST00000144790.8 ENSMUST00000156043.2 ENSMUST00000230599.2 ENSMUST00000230942.2 |
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| CDS CAA 72 bp | TGGAGCTGGGGATGTTTCGTCTTCACACATTCGAGCTaGATGGCTACTTCCTCACCAGAGGCAATGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: WSWGCFVFTHSS*MATSSPEAMLA Trigger: TGCCAACATTGCCTCTGGTGAGGAAGTAGCCATCAAGCTCGAATGTGTGAAGACGAAACATCCCCAGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000117786.9 ENSMUST00000120859.9 ENSMUST00000122044.8 ENSMUST00000135519.2 ENSMUST00000144790.8 ENSMUST00000156043.2 ENSMUST00000230599.2 ENSMUST00000230942.2 |
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