Pregenerated sensors for CSNK1D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025162Ensembl transcript IDs: ENSMUST00000018274.10, ENSMUST00000070575.14, ENSMUST00000146837.2, ENSMUST00000154483.8, ENSMUST00000239115.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCCATGCTCAGCTCGGGCTCGCCCTGGGCACCTCACACCCACCTaGCCTGTGGCCGGTGGCGGCCTGTGTGGCTGGAAGCCCGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: SPCSARARPGHLTPT*PVAGGGLCGWKPGQ Trigger: CTGACCGGGCTTCCAGCCACACAGGCCGCCACCGGCCACAGGGCAGGTGGGTGTGAGGTGCCCAGGGCGAGCCCGAGCTGAGCATGGGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
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| 3UTR TCA 90 bp | GGTGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGAGCTaGGAGGCTCTTCACAGGGAGTCGGGTTCTCTCTGCAATGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: GGIIRERRSATTGGS*EALHRESGSLCNGL Trigger: GAGACCATTGCAGAGAGAACCCGACTCCCTGTGAAGAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR CCA 90 bp | AGATGGGGAGCTCAGGTCCTGCCGTCTCTTCATATCCGGTGCACATaGTGGGGAAGAGCATGGTGGCATCCTAACCGCCAGCGGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: RWGAQVLPSLHIRCT*WGRAWWHPNRQRQS Trigger: GCTCTGCCGCTGGCGGTTAGGATGCCACCATGCTCTTCCCCACCATGTGCACCGGATATGAAGAGACGGCAGGACCTGAGCTCCCCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR TCA 90 bp | GCCCTTCACAGCAAAAAGGAGAGTTCTCATCGGTGCACGACAGACTaGAGACCACTGGAAGCCACCCGACCGGGAATCCAGTGCTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: ALHSKKESSHRCTTD*RPLEATRPGIQCCL Trigger: AAGGCAGCACTGGATTCCCGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGAACTCTCCTTTTTGCTGTGAAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
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| 3UTR CCA 90 bp | CTTCTTGGCACTTCAGGGTTGATTCCCTTTGGCCACTGGTCCCTCTaGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCTCCCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: LLGTSGLIPFGHWSL*ANHGVFLGQPAPWL Trigger: GAGCCAGGGAGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGTGCCAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR CCA 90 bp | GCAAAAAGGAGAGTTCTCATCGGTGCACGACAGACTGAAGACCACTaGAAGCCACCCGACCGGGAATCCAGTGCTGCCTTCCGATGGAGA | + |
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Preference number: 1 (lower is better) Translates to: AKRRVLIGARQTEDH*KPPDRESSAAFRWR Trigger: TCTCCATCGGAAGGCAGCACTGGATTCCCGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGAACTCTCCTTTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
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| 3UTR GCA 90 bp | TTGCAACAAAAATCTCAAACTCGCCCGACCCTCCCAACCTCCCTCTaGACTCCTAGACACACAGTCCCACGGAGTCAAGTCTCTGCACCC | + |
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Preference number: 1 (lower is better) Translates to: LQQKSQTRPTLPTSL*TPRHTVPRSQVSAP Trigger: GGGTGCAGAGACTTGACTCCGTGGGACTGTGTGTCTAGGAGTGCAGAGGGAGGTTGGGAGGGTCGGGCGAGTTTGAGATTTTTGTTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR GCA 90 bp | CATAGGCTGACAGGGAAAATCAGAGATGGACCCACACACATGTACTaGACCCACTTCTCAGATGGGGAGCTCAGGTCCTGCCGTCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: HRLTGKIRDGPTHMY*THFSDGELRSCRLF Trigger: GAAGAGACGGCAGGACCTGAGCTCCCCATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATTTTCCCTGTCAGCCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR CCA 90 bp | AATCAGAGATGGACCCACACACATGTACTGCACCCACTTCTCAGATaGGGAGCTCAGGTCCTGCCGTCTCTTCATATCCGGTGCACATGG | + |
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Preference number: 1 (lower is better) Translates to: NQRWTHTHVLHPLLR*GAQVLPSLHIRCTW Trigger: CCATGTGCACCGGATATGAAGAGACGGCAGGACCTGAGCTCCCCATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR CCA 90 bp | AGTTACCTGCTTCTTGGCACTTCAGGGTTGATTCCCTTTGGCCACTaGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SYLLLGTSGLIPFGH*SLWANHGVFLGQPA Trigger: AGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGTGCCAAGAAGCAGGTAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR CCA 90 bp | GATAGGCAGTTACCTGCTTCTTGGCACTTCAGGGTTGATTCCCTTTaGCCACTGGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGACA | + |
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Preference number: 1 (lower is better) Translates to: DRQLPASWHFRVDSL*PLVPLGKPWCVSRT Trigger: TGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGTGCCAAGAAGCAGGTAACTGCCTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR CCA 90 bp | AGCCAGCTCCCTGGCTCTGAGCAGAGAGCCCATGACAAACCCAAATaGCATCTGCATGAGACTATTCAGTCTATTCTGCAACTTCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SQLPGSEQRAHDKPK*HLHETIQSILQLPK Trigger: CTTGGGAAGTTGCAGAATAGACTGAATAGTCTCATGCAGATGCCATTTGGGTTTGTCATGGGCTCTCTGCTCAGAGCCAGGGAGCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR GCA 90 bp | ACTAGTAAAGCCATTGGTAACAGAGTAGATCAGCCATGCATTGTCTaGCCTTCACAGCAAAAAGGAGAGTTCTCATCGGTGCACGACAGA | + |
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Preference number: 1 (lower is better) Translates to: TSKAIGNRVDQPCIV*PSQQKGEFSSVHDR Trigger: TCTGTCGTGCACCGATGAGAACTCTCCTTTTTGCTGTGAAGGGCAGACAATGCATGGCTGATCTACTCTGTTACCAATGGCTTTACTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | CCACTGGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCTCCCTGCACACGGGGCCACGGTaGCAGCCCCTGGCGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: PLVPLGKPWCVSRTASSLHTGPR*QPLAMA Trigger: TGCCATCGCCAGGGGCTGCCACCGTGGCCCCGTGTG...CAGGGAGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAGCTGCGGTGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGACAGACTGAAGACCACTaGAAGCCACCCGACCGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVAAVGSSGSAGPPPLVGQTEDH*KPPDRE Trigger: TTCCCGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTG...TCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCACCGCAGCTACCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGGGCGGTGGCGGCCTGTGTaGCTGGAAGCCCGGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FSMWSAPADLCPAHAQLGRWRPV*LEARSE Trigger: CTCTGACCGGGCTTCCAGCCACACAGGCCGCCACCG...CCCGAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAATCAGAGATGGACCCACACACATGTACTGCACCCACTTCTCAGATGGGGCACACGGGGCCACGGTaGCAGCCCCTGGCGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: GKSEMDPHTCTAPTSQMGHTGPR*QPLAMA Trigger: TGCCATCGCCAGGGGCTGCCACCGTGGCCCCGTGTG...CCCCATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTCCTTTGGGAGGACTGCCAGGCCGTGGTGCTTTGCTGAGGCTGTAACTTCCTTCTGCCTCCTTTaGGAGGACTGCCAGGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: SASFGRTARPWCFAEAVTSFCLL*EDCQAV Trigger: CACGGCCTGGCAGTCCTCCCAAAGGAGGCAGAAGGA...AGTTACAGCCTCAGCAAAGCACCACGGCCTGGCAGTCCTCCCAAAGGAGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | GTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGGGCGGCCTGTGTGGCTaGAAGCCCGGTCAGAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: VNFSMWSAPADLCPAHAQGGLCG*KPGQRP Trigger: CGGCCTCTGACCGGGCTTCCAGCCACACAGGCCGCC...CTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGTTTTGATTCCCCATGTGCATCGCTGGGTGAGTGGCCTGGAGAGCTCCCGCGGTGCACGACAGACTaGAGACCACTGGAAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: LCFDSPCASLGEWPGELPRCTTD*RPLEAT Trigger: GGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCG...CGGGAGCTCTCCAGGCCACTCACCCAGCGATGCACATGGGGAATCAAAACACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | CCAGAACCACAGGTATCAACAAGAACACTTGCCGGGCAGGCCTGCCACTGGAGATCCTTCTGCCTCCTTTaGGAGGACTGCCAGGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: PEPQVSTRTLAGQACHWRSFCLL*EDCQAV Trigger: CACGGCCTGGCAGTCCTCCCAAAGGAGGCAGAAGGA...TCTCCAGTGGCAGGCCTGCCCGGCAAGTGTTCTTGTTGATACCTGTGGTTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | TCTGGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAAGCTCGGGCTCGCCCTaGGCACCTCACACCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: SGGLVNFSMWSAPADLCPSSGSP*APHTHL Trigger: CAGGTGGGTGTGAGGTGCCCAGGGCGAGCCCGAGCT...TGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCTCCTTTGGGAGGACTGCCAGGCCGTGGTGCTTTGCTGAGGCTGTAACTGAGTCGGGTTCTCTCTaGAATGGTCTCCCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SASFGRTARPWCFAEAVTESGSL*NGLPAS Trigger: AGAGGCTGGGAGACCATTGCAGAGAGAACCCGACTC...AGTTACAGCCTCAGCAAAGCACCACGGCCTGGCAGTCCTCCCAAAGGAGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR GCA 90 bp | CGCAGTGTGTGGCACCACACCTTTCTGGAGGTCACGCAGCATGTGGAGGTGAAGCTCAACACTCACATGTaGCCCTCTCTTGCCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RSVWHHTFLEVTQHVEVKLNTHM*PSLACL Trigger: GAGGCAGGCAAGAGAGGGGCACATGTGAGTGTTGAG...CTTCACCTCCACATGCTGCGTGACCTCCAGAAAGGTGTGGTGCCACACACTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | CACGCCATGGCAGTTGTACCTGCTCTGATGACTGCAGGCTATCAGTTTACAGTGCACGGTGGCAGCCCCTaGCGATGGCAGCTCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: HAMAVVPALMTAGYQFTVHGGSP*RWQLLE Trigger: CTCCAAGAGCTGCCATCGCCAGGGGCTGCCACCGTG...CACTGTAAACTGATAGCCTGCAGTCATCAGAGCAGGTACAACTGCCATGGCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | GGAAAATCAGAGATGGACCCACACACATGTACTGCACCCACTTCTCAGATGGGGCCCCATGTGCATCGCTaGGTGAGTGGCCTGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GKSEMDPHTCTAPTSQMGPHVHR*VSGLES Trigger: GCTCTCCAGGCCACTCACCCAGCGATGCACATGGGG...CCCCATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | GAGTCAGATAGGCAGTTACCTGCTTCTTGGCACTTCAGGGTTGATTCCCTTTGGGGCAGCCCCTGGCGATaGCAGCTCTTGGAGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: ESDRQLPASWHFRVDSLWGSPWR*QLLEPV Trigger: GACAGGCTCCAAGAGCTGCCATCGCCAGGGGCTGCC...CCAAAGGGAATCAACCCTGAAGTGCCAAGAAGCAGGTAACTGCCTATCTGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGCCACTGGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCACACAAGCTCAGCTTTaGATCTTGGAGCTCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LWPLVPLGKPWCVSRTASTQAQL*ILELSS Trigger: GCTGGAGAGCTCCAAGATTCAAAGCTGAGCTTGTGT...GCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCTCCTTTGGGAGGACTGCCAGGCCGTGGTGCTTTGCTGAGGCTGTAACTCATGTGCCCCTCTCTTaGCTGCCTCCATTTTACATA | + |
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Preference number: 2 (lower is better) Translates to: SASFGRTARPWCFAEAVTHVPLS*LPPFYI Trigger: TATGTAAAATGGAGGCAGGCAAGAGAGGGGCACATG...AGTTACAGCCTCAGCAAAGCACCACGGCCTGGCAGTCCTCCCAAAGGAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGAAAATCAGAGATGGACCCACACACATGTACTGCACCCACTTCTCAGATCCCCATGTGCATCGCTaGGTGAGTGGCCTGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: TGKIRDGPTHMYCTHFSDPHVHR*VSGLES Trigger: GCTCTCCAGGCCACTCACCCAGCGATGCACATGGGG...ATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATTTTCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | ACTTCAGGGTTGATTCCCTTTGGCCACTGGTCCCTCTGGGCAAACCATGGTGTGATTCCCTTTGGCCACTaGTCCCTCTGGGCAAACCAT | + |
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Preference number: 2 (lower is better) Translates to: TSGLIPFGHWSLWANHGVIPFGH*SLWANH Trigger: ATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAAT...CACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCCACTGGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCTACACAAGCTCAGCTTTaGATCTTGGAGCTCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: FGHWSLWANHGVFLGQPATQAQL*ILELSS Trigger: GCTGGAGAGCTCCAAGATTCAAAGCTGAGCTTGTGT...AGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR GCA 90 bp | ACTTCAGGGTTGATTCCCTTTGGCCACTGGTCCCTCTGGGCAAACCATGGTGTGCAGCCATGCATTGTCTaGCCTTCACAGCAAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: TSGLIPFGHWSLWANHGVQPCIV*PSQQKG Trigger: TCCTTTTTGCTGTGAAGGGCAGACAATGCATGGCTG...CACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAACCAGCATAACTCTCCATAGGCTGACAGGGAAAATCAGAGATGGACCCCTCAACACTCACATGTaGCCCTCTCTTGCCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: EVTSITLHRLTGKIRDGPLNTHM*PSLACL Trigger: GAGGCAGGCAAGAGAGGGGCACATGTGAGTGTTGAG...GGGTCCATCTCTGATTTTCCCTGTCAGCCTATGGAGAGTTATGCTGGTTACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR GCA 90 bp | ACAAACGCACAGCTCAGAGACTGGTCACCAAGACACAGGTTGATACACACATTCGGGGAGCTCAGGTCCTaGCGTCTCTTCATATCCGGT | + |
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Preference number: 2 (lower is better) Translates to: TNAQLRDWSPRHRLIHTFGELRS*RLFISG Trigger: ACCGGATATGAAGAGACGGCAGGACCTGAGCTCCCC...GAATGTGTGTATCAACCTGTGTCTTGGTGACCAGTCTCTGAGCTGTGCGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | GGCTATCAGTTTACAGTGGGAAAGAGTAAGCAAGATGCCCAAATTAGGCTGATGCAGGTCCGCCACCACTaGTGGGAGCTGAGAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GYQFTVGKSKQDAQIRLMQVRHH*WELRGS Trigger: AGAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTG...CATCAGCCTAATTTGGGCATCTTGCTTACTCTTTCCCACTGTAAACTGATAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAACCAGCATAACTCTCCATAGGCTGACAGGGAAAATCAGAGATGGACCCGGCCACTGGTCCCTCTaGGCAAACCATGGTGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: EVTSITLHRLTGKIRDGPGHWSL*ANHGVF Trigger: AAACACACCATGGTTTGCCCAGAGGGACCAGTGGCC...GGGTCCATCTCTGATTTTCCCTGTCAGCCTATGGAGAGTTATGCTGGTTACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGAGTAACCAGTTCAGGATTCAGAAATCAGCACCCACAGGCTCAGATGGCCATATCCGGTGCACATaGTGGGGAAGAGCATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LQSNQFRIQKSAPTGSDGHIRCT*WGRAWW Trigger: CCACCATGCTCTTCCCCACCATGTGCACCGGATATG...GCCATCTGAGCCTGTGGGTGCTGATTTCTGAATCCTGAACTGGTTACTCTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | CCACTGGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCTCCCTGCATGACAAACCCAAATaGCATCTGCATGAGACTATT | + |
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Preference number: 2 (lower is better) Translates to: PLVPLGKPWCVSRTASSLHDKPK*HLHETI Trigger: AATAGTCTCATGCAGATGCCATTTGGGTTTGTCATG...CAGGGAGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | ACAAACGCACAGCTCAGAGACTGGTCACCAAGACACAGGTTGATACACACATTCAGACCACGCAGTGTGTaGCACCACACCTTTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TNAQLRDWSPRHRLIHTFRPRSV*HHTFLE Trigger: CTCCAGAAAGGTGTGGTGCCACACACTGCGTGGTCT...GAATGTGTGTATCAACCTGTGTCTTGGTGACCAGTCTCTGAGCTGTGCGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR GCA 90 bp | TCTGATAAAGGATTTGCAACAAAAATCTCAAACTCGCCCGACCCTCCCAACCTCCTCCCAACCTCCCTCTaGACTCCTAGACACACAGTC | + |
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Preference number: 2 (lower is better) Translates to: SDKGFATKISNSPDPPNLLPTSL*TPRHTV Trigger: GACTGTGTGTCTAGGAGTGCAGAGGGAGGTTGGGAG...GAGGTTGGGAGGGTCGGGCGAGTTTGAGATTTTTGTTGCAAATCCTTTATCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | ACTATTCAGTCTATTCTGCAACTTCCCAAGTTCAAAGGCATAGAGGAAACCAATCACGGTGGCAGCCCCTaGCGATGGCAGCTCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TIQSILQLPKFKGIEETNHGGSP*RWQLLE Trigger: CTCCAAGAGCTGCCATCGCCAGGGGCTGCCACCGTG...ATTGGTTTCCTCTATGCCTTTGAACTTGGGAAGTTGCAGAATAGACTGAATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR CCA 90 bp | TCTGATAAAGGATTTGCAACAAAAATCTCAAACTCGCCCGACCCTCCCAACCTCATCCGGTGCACATGGTaGGGAAGAGCATGGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SDKGFATKISNSPDPPNLIRCTW*GRAWWH Trigger: ATGCCACCATGCTCTTCCCCACCATGTGCACCGGAT...GAGGTTGGGAGGGTCGGGCGAGTTTGAGATTTTTGTTGCAAATCCTTTATCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAACCAGCATAACTCTCCATAGGCTGACAGGGAAAATCAGAGATGGACCCCATGTGCCCCTCTCTTaGCTGCCTCCATTTTACATA | + |
|
Preference number: 2 (lower is better) Translates to: EVTSITLHRLTGKIRDGPHVPLS*LPPFYI Trigger: TATGTAAAATGGAGGCAGGCAAGAGAGGGGCACATG...GGGTCCATCTCTGATTTTCCCTGTCAGCCTATGGAGAGTTATGCTGGTTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCTGTCCATTTAGTTTGTGTTTTGATTCCCCATGTGCATCGCTGGGTGAGTCAGCCATGCATTGTCTaGCCTTCACAGCAAAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: EPVHLVCVLIPHVHRWVSQPCIV*PSQQKG Trigger: TCCTTTTTGCTGTGAAGGGCAGACAATGCATGGCTG...ACTCACCCAGCGATGCACATGGGGAATCAAAACACAAACTAAATGGACAGGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR-3UTR GCA 90 bp | TCTGAGCAGAGAGCCCATGACAAACCCAAATGGCATCTGCATGAGACTATTCAGACCTGCTCTGATGACTaGAGGCTATCAGTTTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: SEQRAHDKPKWHLHETIQTCSDD*RLSVYS Trigger: ACTGTAAACTGATAGCCTGCAGTCATCAGAGCAGGT...CTGAATAGTCTCATGCAGATGCCATTTGGGTTTGTCATGGGCTCTCTGCTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR-3UTR TCA 90 bp | ACAAACGCACAGCTCAGAGACTGGTCACCAAGACACAGGTTGATACACACATTCAGTTCCTTTCCAAAGTaGACAGCACAACATGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TNAQLRDWSPRHRLIHTFSSFPK*TAQHEK Trigger: TTTCTCATGTTGTGCTGTTCACTTTGGAAAGGAACT...GAATGTGTGTATCAACCTGTGTCTTGGTGACCAGTCTCTGAGCTGTGCGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR-3UTR TCA 90 bp | GTACTCAATACGACTTATCATTTGGTCAGCAAGCAACAGAACAGTTTTGAGACTGTAGCTCCATCACCATaGCATTGTAGTCCCCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLNTTYHLVSKQQNSFETVAPSP*HCSPPQ Trigger: CTGAGGGGGACTACAATGTCATGGTGATGGAGCTAC...AGTCTCAAAACTGTTCTGTTGCTTGCTGACCAAATGATAAGTCGTATTGAGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146837.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCAATCCTCTCCCTAGAAACCACAAACACAAGCTCAGCTTTGAATCTTGGAACCTGCTCTGATGACTaGAGGCTATCAGTTTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: TAILSLETTNTSSALNLGTCSDD*RLSVYS Trigger: ACTGTAAACTGATAGCCTGCAGTCATCAGAGCAGGT...TCCAAGATTCAAAGCTGAGCTTGTGTTTGTGGTTTCTAGGGAGAGGATTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR-3UTR CCA 90 bp | ACAAACGCACAGCTCAGAGACTGGTCACCAAGACACAGGTTGATACACACATTCCATGACAAACCCAAATaGCATCTGCATGAGACTATT | + |
|
Preference number: 2 (lower is better) Translates to: TNAQLRDWSPRHRLIHTFHDKPK*HLHETI Trigger: AATAGTCTCATGCAGATGCCATTTGGGTTTGTCATG...GAATGTGTGTATCAACCTGTGTCTTGGTGACCAGTCTCTGAGCTGTGCGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR-3UTR CCA 90 bp | GTACTCAATACGACTTATCATTTGGTCAGCAAGCAACAGAACAGTTTTGAGACTTTCCTGACTGGATTTTaGTCTGGTGAAGTGCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLNTTYHLVSKQQNSFETFLTGF*SGEVPG Trigger: CCCAGGCACTTCACCAGACCAAAATCCAGTCAGGAA...AGTCTCAAAACTGTTCTGTTGCTTGCTGACCAAATGATAAGTCGTATTGAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146837.2 |
||
| 3UTR-3UTR TCA 90 bp | TACTCAATACGACTTATCATTTGGTCAGCAAGCAACAGAACAGTTTTGAGACTATTTAATCTATTTTCCTaGCTGGATTTTGGTCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: YSIRLIIWSASNRTVLRLFNLFS*LDFGLV Trigger: CACCAGACCAAAATCCAGTCAGGAAAATAGATTAAA...TAGTCTCAAAACTGTTCTGTTGCTTGCTGACCAAATGATAAGTCGTATTGAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146837.2 |
||
| 3UTR TCA 72 bp | ATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGAGCTaGGAGGCTCTTCACAGGGAGTCGGGTTCTCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: IRERRSATTGGS*EALHRESGSLC Trigger: GCAGAGAGAACCCGACTCCCTGTGAAGAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | TGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTaGGAGCTGAGAGGCTCTTCACAGGGAGTCGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WDHQGAQVRHHW*ELRGSSQGVGF Trigger: GAACCCGACTCCCTGTGAAGAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR GCA 72 bp | CCTTCTGCCTCCTTTGGGAGGACTGCCAGGCCGTGGTaGTTTGCTGAGGCTGTAACTGTGAGCCCTCACGCC | + |
|
Preference number: 3 (lower is better) Translates to: PSASFGRTARPW*FAEAVTVSPHA Trigger: GGCGTGAGGGCTCACAGTTACAGCCTCAGCAAAGCACCACGGCCTGGCAGTCCTCCCAAAGGAGGCAGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | ATAACTGAGCTCACACGGGGCCACGGTGGCAGCCCCTaGCGATGGCAGCTCTTGGAGCCTGTCCATTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ITELTRGHGGSP*RWQLLEPVHLV Trigger: AACTAAATGGACAGGCTCCAAGAGCTGCCATCGCCAGGGGCTGCCACCGTGGCCCCGTGTGAGCTCAGTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | AGAGGCTCTTCACAGGGAGTCGGGTTCTCTCTGCAATaGTCTCCCAGCCTCTGCTCTTCGTCCCAGCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RGSSQGVGFSLQ*SPSLCSSSQPH Trigger: ATGGGGCTGGGACGAAGAGCAGAGGCTGGGAGACCATTGCAGAGAGAACCCGACTCCCTGTGAAGAGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | CTTCCTTCTGCCTCCTTTGGGAGGACTGCCAGGCCGTaGTGCTTTGCTGAGGCTGTAACTGTGAGCCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSASFGRTARP*CFAEAVTVSPH Trigger: GTGAGGGCTCACAGTTACAGCCTCAGCAAAGCACCACGGCCTGGCAGTCCTCCCAAAGGAGGCAGAAGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | GCTCAGGTCCTGCCGTCTCTTCATATCCGGTGCACATaGTGGGGAAGAGCATGGTGGCATCCTAACCGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AQVLPSLHIRCT*WGRAWWHPNRQ Trigger: CTGGCGGTTAGGATGCCACCATGCTCTTCCCCACCATGTGCACCGGATATGAAGAGACGGCAGGACCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | GATTCCCTTTGGCCACTGGTCCCTCTGGGCAAACCATaGTGTGTTTCTAGGACAGCCAGCTCCCTGGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DSLWPLVPLGKP*CVSRTASSLAL Trigger: CAGAGCCAGGGAGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | AGAGTTCTCATCGGTGCACGACAGACTGAAGACCACTaGAAGCCACCCGACCGGGAATCCAGTGCTGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RVLIGARQTEDH*KPPDRESSAAF Trigger: GAAGGCAGCACTGGATTCCCGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGAACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
||
| 3UTR GCA 72 bp | AAATCTCAAACTCGCCCGACCCTCCCAACCTCCCTCTaGACTCCTAGACACACAGTCCCACGGAGTCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: KSQTRPTLPTSL*TPRHTVPRSQV Trigger: GACTTGACTCCGTGGGACTGTGTGTCTAGGAGTGCAGAGGGAGGTTGGGAGGGTCGGGCGAGTTTGAGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | TGGACCCACACACATGTACTGCACCCACTTCTCAGATaGGGAGCTCAGGTCCTGCCGTCTCTTCATATCCGG | + |
|
Preference number: 3 (lower is better) Translates to: WTHTHVLHPLLR*GAQVLPSLHIR Trigger: CCGGATATGAAGAGACGGCAGGACCTGAGCTCCCCATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGTGTGTGGCACCACACCTTTCTGGAGGTCACGCAGCATGTGGAGGTGAAGACATGTGCCCCTCTCTaGCCTGCCTCCATTTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: RSVWHHTFLEVTQHVEVKTCAPL*PASILH Trigger: ATGTAAAATGGAGGCAGGCAAGAGAGGGGCACATGT...CTTCACCTCCACATGCTGCGTGACCTCCAGAAAGGTGTGGTGCCACACACTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR TCA 72 bp | AGCAAAAAGGAGAGTTCTCATCGGTGCACGACAGACTaGAGACCACTGGAAGCCACCCGACCGGGAATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SKKESSHRCTTD*RPLEATRPGIQ Trigger: CTGGATTCCCGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGAACTCTCCTTTTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
||
| 3UTR TCA 72 bp | CAGTGGGAAAGAGTAAGCAAGATGCCCAAATTAGGCTaGTGGGAGCCACAAGACACACACGCACACGCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QWERVSKMPKLG*WEPQDTHAHAH Trigger: GTGCGCGTGTGCGTGTGTGTCTTGTGGCTCCCATCAGCCTAATTTGGGCATCTTGCTTACTCTTTCCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | ACTTCAGGGTTGATTCCCTTTGGCCACTGGTCCCTCTaGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TSGLIPFGHWSL*ANHGVFLGQPA Trigger: AGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | CTTCTTGGCACTTCAGGGTTGATTCCCTTTGGCCACTaGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLGTSGLIPFGH*SLWANHGVFLG Trigger: TCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGTGCCAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | TTACCTGCTTCTTGGCACTTCAGGGTTGATTCCCTTTaGCCACTGGTCCCTCTGGGCAAACCATGGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPASWHFRVDSL*PLVPLGKPWCV Trigger: AACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGTGCCAAGAAGCAGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR GCA 72 bp | CACACACATCCTCAACACTCACATGTGCCCCTCTCTTaGCTGCCTCCATTTTACATAGAAGCTCCAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HTHPQHSHVPLS*LPPFYIEAPSQ Trigger: CTGGCTTGGAGCTTCTATGTAAAATGGAGGCAGGCAAGAGAGGGGCACATGTGAGTGTTGAGGATGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR TCA 72 bp | TCAGATGGCTGGCAGGCACAATTAACAGCCACATTCTaGGGTGCTATATCACACATCAGCAGTGTGTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SDGWQAQLTATF*GAISHISSVSL Trigger: GAGGGACACACTGCTGATGTGTGATATAGCACCTCAGAATGTGGCTGTTAATTGTGCCTGCCAGCCATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR TCA 72 bp | ACCACACCTTTCTGGAGGTCACGCAGCATGTGGAGGTaGAGGTTTGTTTTAGAGTCAGATAGGCAGTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: TTPFWRSRSMWR*RFVLESDRQLP Trigger: AGGTAACTGCCTATCTGACTCTAAAACAAACCTTCACCTCCACATGCTGCGTGACCTCCAGAAAGGTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR GCA 72 bp | CTGAGCAGAGAGCCCATGACAAACCCAAATGGCATCTaGATGAGACTATTCAGTCTATTCTGCAACTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSREPMTNPNGI*MRLFSLFCNFP Trigger: TGGGAAGTTGCAGAATAGACTGAATAGTCTCATGCAGATGCCATTTGGGTTTGTCATGGGCTCTCTGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | TTTGTTTTAGAGTCAGATAGGCAGTTACCTGCTTCTTaGCACTTCAGGGTTGATTCCCTTTGGCCACTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: FVLESDRQLPAS*HFRVDSLWPLV Trigger: GACCAGTGGCCAAAGGGAATCAACCCTGAAGTGCCAAGAAGCAGGTAACTGCCTATCTGACTCTAAAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CCA 72 bp | AACCTAAGTTTCCTGCCTTCTGTTTATTCGACCCTCTaGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: NLSFLPSVYSTL*RAGKFLYVVST Trigger: GGTGCTGACCACATAGAGAAATTTACCAGCCCTCCAGAGGGTCGAATAAACAGAAGGCAGGAAACTTAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGAAAATCAGAGATGGACCCACACACATGTACTGCACCCACTTCTCAGATCATTTAGTTTGTGTTTaGATTCCCCATGTGCATCGC | + |
|
Preference number: 3 (lower is better) Translates to: TGKIRDGPTHMYCTHFSDHLVCV*IPHVHR Trigger: GCGATGCACATGGGGAATCAAAACACAAACTAAATG...ATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATTTTCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAATCCTCTCCCTAGAAACCACAAACACAAGCTCAGCTTTGAATCTTGGACATTTAGTTTGTGTTTaGATTCCCCATGTGCATCGC | + |
|
Preference number: 3 (lower is better) Translates to: TAILSLETTNTSSALNLGHLVCV*IPHVHR Trigger: GCGATGCACATGGGGAATCAAAACACAAACTAAATG...TCCAAGATTCAAAGCTGAGCTTGTGTTTGTGGTTTCTAGGGAGAGGATTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | CTGTCCAGCCCATGCTCAGCTCGGGCTCGCCCTGGGCACCTCACACCCACCTGCGCGGCCTTCAGCCCCTaGCAGGGGAGAGAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSPCSARARPGHLTPTCAAFSP*QGREPR Trigger: CCTGGGCTCTCTCCCCTGGCAGGGGCTGAAGGCCGC...GCAGGTGGGTGTGAGGTGCCCAGGGCGAGCCCGAGCTGAGCATGGGCTGGACAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCCAGCCCATGCTCAGCTCGGGCTCGCCCTGGGCACCTCACACCCACCTGCGTACGTCGTGGGCGCTaGGGTCGGCAGCGGGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPCSARARPGHLTPTCVRRGR*GRQRAP Trigger: AGGTGCCCGCTGCCGACCCCAGCGCCCACGACGTAC...GCAGGTGGGTGTGAGGTGCCCAGGGCGAGCCCGAGCTGAGCATGGGCTGGACAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGAGCTGAGAGGCTCGCGGCCTTCAGCCCCTaGCAGGGGAGAGAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGSSGSAGPPPLVGAERLAAFSP*QGREPR Trigger: CCTGGGCTCTCTCCCCTGGCAGGGGCTGAAGGCCGC...GAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | GTGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGAGCTGAGAGGCTCGGTGTTGGCCGTGTGTaGGGTAGGGGTAAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VGSSGSAGPPPLVGAERLGVGRV*GRGKGR Trigger: ACGCCCCTTACCCCTACCTCACACACGGCCAACACC...GAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | GCTCTTCGTCCCAGCCCCATGATAACTGAGCTCACACGGGGCCACGGTGGCAGCCGGTGCACGACAGACTaGAGACCACTGGAAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ALRPSPMITELTRGHGGSRCTTD*RPLEAT Trigger: GGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCG...GCTGCCACCGTGGCCCCGTGTGAGCTCAGTTATCATGGGGCTGGGACGAAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018274.10 |
||
| CDS-3UTR GCA 90 bp | TGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGAGCTGAGAGGCTCTCCGCTCAGCATCATCTaGAGCCCGGCTGGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WDHQGAQVRHHWWELRGSPLSII*SPAGTK Trigger: TTTGGTGCCAGCCGGGCTGCAGATGATGCTGAGCGG...AGAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | TGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGAGCTGAGAGGCTCTACTGGGGCCCCACGGTaGAGCCGCATACTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WDHQGAQVRHHWWELRGSTGAPR*SRILTF Trigger: GAAAGTGAGTATGCGGCTGCACCGTGGGGCCCCAGT...AGAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | AGCGGCAGAGCAGCCCAGCCCGCAGTGTGTCCAGCTGAAGACCACGCAGTGTGTACTGGGGCCCCACGGTaGAGCCGCATACTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGRAAQPAVCPAEDHAVCTGAPR*SRILTF Trigger: GAAAGTGAGTATGCGGCTGCACCGTGGGGCCCCAGT...ACACACTGCGTGGTCTTCAGCTGGACACACTGCGGGCTGGGCTGCTCTGCCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | CTGTCCAGCCCATGCTCAGCTCGGGCTCGCCCTGGGCACCTCACACCCACCTGCGGCTGGCACCAAATTTaGGCATGTTCCAGTCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LSSPCSARARPGHLTPTCGWHQI*ACSSRT Trigger: TGTTCGACTGGAACATGCTCAAATTTGGTGCCAGCC...GCAGGTGGGTGTGAGGTGCCCAGGGCGAGCCCGAGCTGAGCATGGGCTGGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTGCTATATCACACATCAGCAGTGTGTCCCTCCCAACCCCGGGCCAGTGCTCTCCGAAGGAGCCGCTaGCGATCTTGCGGCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVLYHTSAVCPSQPRASALRRSR*RSCGPV Trigger: GACTGGGCCGCAAGATCGGCAGCGGCTCCTTCGGAG...AGCACTGGCCCGGGGTTGGGAGGGACACACTGCTGATGTGTGATATAGCACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCCTTGGCGGGCCGCGTaGAGCCGGAGAGACGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGLVNFSMWSAPADLCPAPWRAA*SRRDAM Trigger: CATGGCGTCTCTCCGGCTGCACGCGGCCCGCCAAGG...GGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGCCACTGGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCTGGGGGAGCCACTTCCTaGGTTCCCCGCAGACGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FGHWSLWANHGVFLGQPAGGATS*VPRRRP Trigger: CGGCCGTCTGCGGGGAACCCAGGAAGTGGCTCCCCC...AGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | TTGTGTTTTGATTCCCCATGTGCATCGCTGGGTGAGTGGCCTGGAGAGCTCCCGCTCCGAAGGAGCCGCTaGCGATCTTGCGGCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCFDSPCASLGEWPGELPLRRSR*RSCGPV Trigger: GACTGGGCCGCAAGATCGGCAGCGGCTCCTTCGGAG...CGGGAGCTCTCCAGGCCACTCACCCAGCGATGCACATGGGGAATCAAAACACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | AATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGGGGGAGCCACTTCCTaGGTTCCCCGCAGACGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NFSMWSAPADLCPAHAQLGGATS*VPRRRP Trigger: CGGCCGTCTGCGGGGAACCCAGGAAGTGGCTCCCCC...GAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCGTCCCAGCCCCATGATAACTGAGCTCACACGGGGCCACGGTGGCAGCATCCTCTCATACTTCTaGCTCTTGGTGGCGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALRPSPMITELTRGHGGSILSYF*LLVAAF Trigger: GAAGGCCGCCACCAAGAGGCAGAAGTATGAGAGGAT...GCTGCCACCGTGGCCCCGTGTGAGCTCAGTTATCATGGGGCTGGGACGAAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | ACTGGTAGCTGCGGTGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGCAGAAGGATAGCCCTTaGACAGCACTTCAATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGSCGGIIRERRSATTGGQKDSP*TALQWE Trigger: CTCCCATTGAAGTGCTGTGCAAGGGCTATCCTTCTG...CCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCACCGCAGCTACCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGGGCCGCTCAGCATCATCTaGAGCCCGGCTGGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSMWSAPADLCPAHAQLGPLSII*SPAGTK Trigger: TTTGGTGCCAGCCGGGCTGCAGATGATGCTGAGCGG...CCCGAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAACCACAGGTATCAACAAGAACACTTGCCGGGCAGGCCTGCCACTGGAGAACTTCTGCCTCTTGGTaGCGGCCTTCAGCCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEPQVSTRTLAGQACHWRTSASW*RPSAPA Trigger: GGCAGGGGCTGAAGGCCGCCACCAAGAGGCAGAAGT...TCTCCAGTGGCAGGCCTGCCCGGCAAGTGTTCTTGTTGATACCTGTGGTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CAA 72 bp | ATACCCCTCCAGAACCACAGGTATCAACAAGAACACTaGCCGGGCAGGCCTGCCACTGGAGAGGGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: IPLQNHRYQQEH*PGRPATGEGRT Trigger: GGTCCTCCCCTCTCCAGTGGCAGGCCTGCCCGGCAAGTGTTCTTGTTGATACCTGTGGTTCTGGAGGGGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | ACTTCAGGGTTGATTCCCTTTGGCCACTGGTCCCTCTGGGCAAACCATGGTGTGAGCCGCTGCCGATCTTaGGGCCCAGTCGGTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSGLIPFGHWSLWANHGVSRCRS*GPVGTC Trigger: ACAGGTACCGACTGGGCCGCAAGATCGGCAGCGGCT...CACACCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GTCCATTTAGTTTGTGTTTTGATTCCCCATGTGCATCGCTGGGTGAGTGGCCTGGCGGCCTTCAGCCCCTaGCAGGGGAGAGAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLVCVLIPHVHRWVSGLAAFSP*QGREPR Trigger: CCTGGGCTCTCTCCCCTGGCAGGGGCTGAAGGCCGC...CAGGCCACTCACCCAGCGATGCACATGGGGAATCAAAACACAAACTAAATGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | TCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGGGCGTAGCTCCATCACCATaGCATTGTAGTCCCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCGQHLLTSVQPMLSSGVAPSP*HCSPPQ Trigger: CTGAGGGGGACTACAATGTCATGGTGATGGAGCTAC...GCCCGAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR TCA 90 bp | GTGCACGACAGACTGAAGACCACTGGAAGCCACCCGACCGGGAATCCAGTGCTGAGCGTGCTGTCCCTGTaGGGTTCTTGTTCTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHDRLKTTGSHPTGNPVLSVLSL*GSCSLD Trigger: ATCGAGAGAACAAGAACCTCACAGGGACAGCACGCT...CAGCACTGGATTCCCGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | AATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGGTGTTGGCCGTGTGTaGGGTAGGGGTAAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NFSMWSAPADLCPAHAQLGVGRV*GRGKGR Trigger: ACGCCCCTTACCCCTACCTCACACACGGCCAACACC...GAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR GCA 90 bp | AATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCAGCCGCTGCCGATCTTaGGGCCCAGTCGGTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NFSMWSAPADLCPAHAQLSRCRS*GPVGTC Trigger: ACAGGTACCGACTGGGCCGCAAGATCGGCAGCGGCT...GAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CCA 90 bp | TGGCACTTCAGGGTTGATTCCCTTTGGCCACTGGTCCCTCTGGGCAAACCATGGCATACTTCTGCCTCTTaGTGGCGGCCTTCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WHFRVDSLWPLVPLGKPWHTSAS*WRPSAP Trigger: AGGGGCTGAAGGCCGCCACCAAGAGGCAGAAGTATG...CCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | ACAAACGCACAGCTCAGAGACTGGTCACCAAGACACAGGTTGATACACACATTCGGGGGAGCCACTTCCTaGGTTCCCCGCAGACGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TNAQLRDWSPRHRLIHTFGGATS*VPRRRP Trigger: CGGCCGTCTGCGGGGAACCCAGGAAGTGGCTCCCCC...GAATGTGTGTATCAACCTGTGTCTTGGTGACCAGTCTCTGAGCTGTGCGTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | TTGTGTTTTGATTCCCCATGTGCATCGCTGGGTGAGTGGCCTGGAGAGCTCCCGCAGACTGAAGACCACTaGAAGCCACCCGACCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCFDSPCASLGEWPGELPQTEDH*KPPDRE Trigger: TTCCCGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTG...CGGGAGCTCTCCAGGCCACTCACCCAGCGATGCACATGGGGAATCAAAACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018274.10 |
||
| CDS-3UTR TCA 90 bp | GAGGTGCTATATCACACATCAGCAGTGTGTCCCTCCCAACCCCGGGCCAGTGCTGTAGCTCCATCACCATaGCATTGTAGTCCCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVLYHTSAVCPSQPRASAVAPSP*HCSPPQ Trigger: CTGAGGGGGACTACAATGTCATGGTGATGGAGCTAC...AGCACTGGCCCGGGGTTGGGAGGGACACACTGCTGATGTGTGATATAGCACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | CACGCCATGGCAGTTGTACCTGCTCTGATGACTGCAGGCTATCAGTTTACAGTGGGTGTTGGCCGTGTGTaGGGTAGGGGTAAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HAMAVVPALMTAGYQFTVGVGRV*GRGKGR Trigger: ACGCCCCTTACCCCTACCTCACACACGGCCAACACC...CACTGTAAACTGATAGCCTGCAGTCATCAGAGCAGGTACAACTGCCATGGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GTGGCACCACACCTTTCTGGAGGTCACGCAGCATGTGGAGGTGAAGGTTTGTTTCCGCTCAGCATCATCTaGAGCCCGGCTGGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAPHLSGGHAACGGEGLFPLSII*SPAGTK Trigger: TTTGGTGCCAGCCGGGCTGCAGATGATGCTGAGCGG...AAACAAACCTTCACCTCCACATGCTGCGTGACCTCCAGAAAGGTGTGGTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | GGAAAATCAGAGATGGACCCACACACATGTACTGCACCCACTTCTCAGATGGGGACTTCTGCCTCTTGGTaGCGGCCTTCAGCCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKSEMDPHTCTAPTSQMGTSASW*RPSAPA Trigger: GGCAGGGGCTGAAGGCCGCCACCAAGAGGCAGAAGT...CCCCATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | TGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGAGCTGAGAGGCTCTTGCACAGCACTTCAATaGGAGTGGACATCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WDHQGAQVRHHWWELRGSCTALQ*EWTSSS Trigger: AGAAGAAGATGTCCACTCCCATTGAAGTGCTGTGCA...AGAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | TGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGAGCTGAGAGGCTCTGAGACTAAACTTCCTTaGACAGAAGTTGAACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WDHQGAQVRHHWWELRGSETKLP*TEVEQV Trigger: GACCTGTTCAACTTCTGTTCAAGGAAGTTTAGTCTC...AGAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGACTGGGGCCCCACGGTaGAGCCGCATACTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VNFSMWSAPADLCPAHAQTGAPR*SRILTF Trigger: GAAAGTGAGTATGCGGCTGCACCGTGGGGCCCCAGT...CTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAACCACAGGTATCAACAAGAACACTTGCCGGGCAGGCCTGCCACTGGAGATCTGTGAGGTGGACATaGGAGAGGTATCTTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PEPQVSTRTLAGQACHWRSVRWT*ERYLVG Trigger: GCCGACAAGATACCTCTCGCATGTCCACCTCACAGA...TCTCCAGTGGCAGGCCTGCCCGGCAAGTGTTCTTGTTGATACCTGTGGTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | GGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCAGCGTGCTGTCCCTGTaGGGTTCTTGTTCTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGLVNFSMWSAPADLCPASVLSL*GSCSLD Trigger: ATCGAGAGAACAAGAACCTCACAGGGACAGCACGCT...GGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR TCA 90 bp | CCACTGGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCTCCCTGGATGGAACAGATTTCTaGAGAGCTGTCTCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVPLGKPWCVSRTASSLDGTDF*RAVSGR Trigger: CCTACCTGAGACAGCTCTTCAGAAATCTGTTCCATC...CAGGGAGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCTCATCGGTGCACGACAGACTGAAGACCACTGGAAGCCACCCGACCGGGATGGAACAGATTTCTaGAGAGCTGTCTCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLIGARQTEDHWKPPDRDGTDF*RAVSGR Trigger: CCTACCTGAGACAGCTCTTCAGAAATCTGTTCCATC...CCGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGAACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | CCAGAACCACAGGTATCAACAAGAACACTTGCCGGGCAGGCCTGCCACTGGAGAGGCTGGCACCAAATTTaGGCATGTTCCAGTCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PEPQVSTRTLAGQACHWRGWHQI*ACSSRT Trigger: TGTTCGACTGGAACATGCTCAAATTTGGTGCCAGCC...TCTCCAGTGGCAGGCCTGCCCGGCAAGTGTTCTTGTTGATACCTGTGGTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | TTGCAGAGTAACCAGTTCAGGATTCAGAAATCAGCACCCACAGGCTCAGATGGCCCGACCGGGAATCTGTaGGGTGGACATGCGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSNQFRIQKSAPTGSDGPTGNL*GGHARG Trigger: ACCTCTCGCATGTCCACCTCACAGATTCCCGGTCGG...GCCATCTGAGCCTGTGGGTGCTGATTTCTGAATCCTGAACTGGTTACTCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018274.10 |
||
| CDS-3UTR GCA 90 bp | ACAAACGCACAGCTCAGAGACTGGTCACCAAGACACAGGTTGATACACACATTCAGCCGCTGCCGATCTTaGGGCCCAGTCGGTACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TNAQLRDWSPRHRLIHTFSRCRS*GPVGTC Trigger: ACAGGTACCGACTGGGCCGCAAGATCGGCAGCGGCT...GAATGTGTGTATCAACCTGTGTCTTGGTGACCAGTCTCTGAGCTGTGCGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCTCTGTGAGGTGGACATaGGAGAGGTATCTTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLVNFSMWSAPADLCPASVRWT*ERYLVG Trigger: GCCGACAAGATACCTCTCGCATGTCCACCTCACAGA...GGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CCA 90 bp | ACTTCCAATGGTCCTAGTCTCGGCACAACCCAGCAGGGCCAGGCTGAACCTGGAGAGAAGCCTTGGCGATaGAACAGATTTCTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSNGPSLGTTQQGQAEPGEKPWR*NRFLKS Trigger: GCTCTTCAGAAATCTGTTCCATCGCCAAGGCTTCTC...TCCAGGTTCAGCCTGGCCCTGCTGGGTTGTGCCGAGACTAGGACCATTGGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGGGGAGAAGCCTTGGCGATaGAACAGATTTCTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSMWSAPADLCPAHAQLGEKPWR*NRFLKS Trigger: GCTCTTCAGAAATCTGTTCCATCGCCAAGGCTTCTC...CCCGAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| 3UTR CAA 72 bp | CAGATAGGCAGTTACCTGCTTCTTGGCACTTCAGGGTaGATTCCCTTTGGCCACTGGTCCCTCTGGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QIGSYLLLGTSG*IPFGHWSLWAN Trigger: GTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGTGCCAAGAAGCAGGTAACTGCCTATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | GGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCTCTTTCCCAGCCCCATaGGGAAGTTATCTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLVNFSMWSAPADLCPASFPAP*GSYLAS Trigger: TGAAGCCAGATAACTTCCTCATGGGGCTGGGAAAGA...GGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCTTCTGTTTATTCGACCCTCTGGAGGGCTGGTAAATTTCTCTATGTGGGTCCCTGCTCCTCTGTaGGGTGGACATGCGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCLLFIRPSGGLVNFSMWVPAPL*GGHARG Trigger: ACCTCTCGCATGTCCACCTCACAGAGGAGCAGGGAC...CCACATAGAGAAATTTACCAGCCCTCCAGAGGGTCGAATAAACAGAAGGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTGCTCTTCGTCCCAGCCCCATGATAACTGAGCTCACACGGGGCCACGGTTCATTTTGTAGATCTTaGTCTCAATGTGGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASALRPSPMITELTRGHGSFCRS*SQCGAE Trigger: CTCAGCTCCACATTGAGAGCAAGATCTACAAAATGA...ACCGTGGCCCCGTGTGAGCTCAGTTATCATGGGGCTGGGACGAAGAGCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | ACTTCCAATGGTCCTAGTCTCGGCACAACCCAGCAGGGCCAGGCTGAACCTGGAGGTGTTCGAAAGGAATaGTATTCTGTGAGGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TSNGPSLGTTQQGQAEPGGVRKE*YSVRWT Trigger: TGTCCACCTCACAGAATAGCATTCCTTTCGAACACC...TCCAGGTTCAGCCTGGCCCTGCTGGGTTGTGCCGAGACTAGGACCATTGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | GCTCTTCGTCCCAGCCCCATGATAACTGAGCTCACACGGGGCCACGGTGGCAGCATACGACTTATCATTTaGTCAGCAAGCAACAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALRPSPMITELTRGHGGSIRLII*SASNRT Trigger: TGTTCTGTTGCTTGCTGACCAAATGATAAGTCGTAT...GCTGCCACCGTGGCCCCGTGTGAGCTCAGTTATCATGGGGCTGGGACGAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | GTCCATTTAGTTTGTGTTTTGATTCCCCATGTGCATCGCTGGGTGAGTGGCCTGCATACTTCTGCCTCTTaGTGGCGGCCTTCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHLVCVLIPHVHRWVSGLHTSAS*WRPSAP Trigger: AGGGGCTGAAGGCCGCCACCAAGAGGCAGAAGTATG...CAGGCCACTCACCCAGCGATGCACATGGGGAATCAAAACACAAACTAAATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | GGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCTGCTCCTCTGTGAGGTaGACATGCGAGAGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGLVNFSMWSAPADLCPACSSVR*TCERYL Trigger: AAGATACCTCTCGCATGTCCACCTCACAGAGGAGCA...GGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| 3UTR CAA 72 bp | CTGGCGATGGCAGCTCTTGGAGCCTGTCCATTTAGTTaGTGTTTTGATTCCCCATGTGCATCGCTGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAMAALGACPFS*CFDSPCASLGE Trigger: CTCACCCAGCGATGCACATGGGGAATCAAAACACAAACTAAATGGACAGGCTCCAAGAGCTGCCATCGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CAA 72 bp | ATCCTCTCCCTAGAAACCACAAACACAAGCTCAGCTTaGAATCTTGGAGCTCTCCAGCAGCCTAGAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSLETTNTSSA*NLGALQQPRGA Trigger: GGCCCCTCTAGGCTGCTGGAGAGCTCCAAGATTCAAAGCTGAGCTTGTGTTTGTGGTTTCTAGGGAGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | CTGTTTATTCGACCCTCTGGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTCATACTTCTGCCTCTTaGTGGCGGCCTTCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFIRPSGGLVNFSMWSAPHTSAS*WRPSAP Trigger: AGGGGCTGAAGGCCGCCACCAAGAGGCAGAAGTATG...AGGTGCTGACCACATAGAGAAATTTACCAGCCCTCCAGAGGGTCGAATAAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAACCACAGGTATCAACAAGAACACTTGCCGGGCAGGCCTGCCACTGGAGATGCACAGCACTTCAATaGGAGTGGACATCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEPQVSTRTLAGQACHWRCTALQ*EWTSSS Trigger: AGAAGAAGATGTCCACTCCCATTGAAGTGCTGTGCA...TCTCCAGTGGCAGGCCTGCCCGGCAAGTGTTCTTGTTGATACCTGTGGTTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | AATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGATGGAACAGATTTCTaGAGAGCTGTCTCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFSMWSAPADLCPAHAQLDGTDF*RAVSGR Trigger: CCTACCTGAGACAGCTCTTCAGAAATCTGTTCCATC...GAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR GCA 90 bp | GTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCAGAAGGATAGCCCTTaGACAGCACTTCAATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VNFSMWSAPADLCPAHAQQKDSP*TALQWE Trigger: CTCCCATTGAAGTGCTGTGCAAGGGCTATCCTTCTG...CTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGATAGGCAGTTACCTGCTTCTTGGCACTTCAGGGTTGATTCCCTTTGGTCTGTGAGGTGGACATaGGAGAGGTATCTTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESDRQLPASWHFRVDSLWSVRWT*ERYLVG Trigger: GCCGACAAGATACCTCTCGCATGTCCACCTCACAGA...CCAAAGGGAATCAACCCTGAAGTGCCAAGAAGCAGGTAACTGCCTATCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CAA 72 bp | CCACACACATCCTCAACACTCACATGTGCCCCTCTCTaGCCTGCCTCCATTTTACATAGAAGCTCCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHTSSTLTCAPL*PASILHRSSKP Trigger: TGGCTTGGAGCTTCTATGTAAAATGGAGGCAGGCAAGAGAGGGGCACATGTGAGTGTTGAGGATGTGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| 3UTR CAA 72 bp | CCACTGGAGAGGGGAGGACCAACTCTGATAAAGGATTaGCAACAAAAATCTCAAACTCGCCCGACCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLERGGPTLIKD*QQKSQTRPTLP Trigger: TGGGAGGGTCGGGCGAGTTTGAGATTTTTGTTGCAAATCCTTTATCAGAGTTGGTCCTCCCCTCTCCAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | TCTGAGCAGAGAGCCCATGACAAACCCAAATGGCATCTGCATGAGACTATTCAGGTAGCTCCATCACCATaGCATTGTAGTCCCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEQRAHDKPKWHLHETIQVAPSP*HCSPPQ Trigger: CTGAGGGGGACTACAATGTCATGGTGATGGAGCTAC...CTGAATAGTCTCATGCAGATGCCATTTGGGTTTGTCATGGGCTCTCTGCTCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | GGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCGAGACTAAACTTCCTTaGACAGAAGTTGAACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGLVNFSMWSAPADLCPAETKLP*TEVEQV Trigger: GACCTGTTCAACTTCTGTTCAAGGAAGTTTAGTCTC...GGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAGATAGGCAGTTACCTGCTTCTTGGCACTTCAGGGTTGATTCCCTTTGGCTCTTTCCCAGCCCCATaGGGAAGTTATCTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQIGSYLLLGTSGLIPFGSFPAP*GSYLAS Trigger: TGAAGCCAGATAACTTCCTCATGGGGCTGGGAAAGA...GCCAAAGGGAATCAACCCTGAAGTGCCAAGAAGCAGGTAACTGCCTATCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | ACAGGGAAAATCAGAGATGGACCCACACACATGTACTGCACCCACTTCTCAGATAGCGTGCTGTCCCTGTaGGGTTCTTGTTCTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGKIRDGPTHMYCTHFSDSVLSL*GSCSLD Trigger: ATCGAGAGAACAAGAACCTCACAGGGACAGCACGCT...ATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATTTTCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | TTGCAGAGTAACCAGTTCAGGATTCAGAAATCAGCACCCACAGGCTCAGATGGCGGCTGGCACCAAATTTaGGCATGTTCCAGTCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQSNQFRIQKSAPTGSDGGWHQI*ACSSRT Trigger: TGTTCGACTGGAACATGCTCAAATTTGGTGCCAGCC...GCCATCTGAGCCTGTGGGTGCTGATTTCTGAATCCTGAACTGGTTACTCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GAGCCTGTCCATTTAGTTTGTGTTTTGATTCCCCATGTGCATCGCTGGGTGAGTATCCTCTCATACTTCTaGCTCTTGGTGGCGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPVHLVCVLIPHVHRWVSILSYF*LLVAAF Trigger: GAAGGCCGCCACCAAGAGGCAGAAGTATGAGAGGAT...ACTCACCCAGCGATGCACATGGGGAATCAAAACACAAACTAAATGGACAGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | CACGCCATGGCAGTTGTACCTGCTCTGATGACTGCAGGCTATCAGTTTACAGTGGAGAAGCCTTGGCGATaGAACAGATTTCTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HAMAVVPALMTAGYQFTVEKPWR*NRFLKS Trigger: GCTCTTCAGAAATCTGTTCCATCGCCAAGGCTTCTC...CACTGTAAACTGATAGCCTGCAGTCATCAGAGCAGGTACAACTGCCATGGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCTCATTTTGTAGATCTTaGTCTCAATGTGGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGLVNFSMWSAPADLCPASFCRS*SQCGAE Trigger: CTCAGCTCCACATTGAGAGCAAGATCTACAAAATGA...GGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCCTTCTGTTTATTCGACCCTCTGGAGGGCTGGTAAATTTCTCTATGTGATCCTCTCATACTTCTaGCTCTTGGTGGCGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPSVYSTLWRAGKFLYVILSYF*LLVAAF Trigger: GAAGGCCGCCACCAAGAGGCAGAAGTATGAGAGGAT...CACATAGAGAAATTTACCAGCCCTCCAGAGGGTCGAATAAACAGAAGGCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAACCACAGGTATCAACAAGAACACTTGCCGGGCAGGCCTGCCACTGGAGAAGAAATTCAGGTATGTaGCAAATTCAGAAGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEPQVSTRTLAGQACHWRRNSGM*QIQKDS Trigger: GCTATCCTTCTGAATTTGCCACATACCTGAATTTCT...TCTCCAGTGGCAGGCCTGCCCGGCAAGTGTTCTTGTTGATACCTGTGGTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GTCACTAGTAAAGCCATTGGTAACAGAGTAGATCAGCCATGCATTGTCTGCCCTCAGAAGGATAGCCCTTaGACAGCACTTCAATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTSKAIGNRVDQPCIVCPQKDSP*TALQWE Trigger: CTCCCATTGAAGTGCTGTGCAAGGGCTATCCTTCTG...AGGGCAGACAATGCATGGCTGATCTACTCTGTTACCAATGGCTTTACTAGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | GGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCAGAAATTCAGGTATGTaGCAAATTCAGAAGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLVNFSMWSAPADLCPARNSGM*QIQKDS Trigger: GCTATCCTTCTGAATTTGCCACATACCTGAATTTCT...GGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGAGCCCATGACAAACCCAAATGGCATCTGCATGAGACTATTCAGTCTACGGGAATCTGTGAGGTaGACATGCGAGAGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SREPMTNPNGICMRLFSLRESVR*TCERYL Trigger: AAGATACCTCTCGCATGTCCACCTCACAGATTCCCG...TAGACTGAATAGTCTCATGCAGATGCCATTTGGGTTTGTCATGGGCTCTCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018274.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCAATCCTCTCCCTAGAAACCACAAACACAAGCTCAGCTTTGAATCTTGGAAGGAATGCTATTCTGTaGGGTGGACATGCGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TAILSLETTNTSSALNLGRNAIL*GGHARG Trigger: ACCTCTCGCATGTCCACCTCACAGAATAGCATTCCT...TCCAAGATTCAAAGCTGAGCTTGTGTTTGTGGTTTCTAGGGAGAGGATTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTTCTGTTTATTCGACCCTCTGGAGGGCTGGTAAATTTCTCTATGTGGTGCACAGCACTTCAATaGGAGTGGACATCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLLFIRPSGGLVNFSMWCTALQ*EWTSSS Trigger: AGAAGAAGATGTCCACTCCCATTGAAGTGCTGTGCA...CCACATAGAGAAATTTACCAGCCCTCCAGAGGGTCGAATAAACAGAAGGCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| 3UTR CAA 72 bp | AGTCCCACGGAGTCAAGTCTCTGCACCCTAAAATGCTaGCAGAGTAACCAGTTCAGGATTCAGAAATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPTESSLCTLKC*QSNQFRIQKSA Trigger: TGCTGATTTCTGAATCCTGAACTGGTTACTCTGCAAGCATTTTAGGGTGCAGAGACTTGACTCCGTGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | TCTGATAAAGGATTTGCAACAAAAATCTCAAACTCGCCCGACCCTCCCAACCTCTGCTATTCTGTGAGGTaGACATGCGAGAGGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDKGFATKISNSPDPPNLCYSVR*TCERYL Trigger: AAGATACCTCTCGCATGTCCACCTCACAGAATAGCA...GAGGTTGGGAGGGTCGGGCGAGTTTGAGATTTTTGTTGCAAATCCTTTATCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070575.14 |
||
| CDS-3UTR TCA 90 bp | ACTATTCAGTCTATTCTGCAACTTCCCAAGTTCAAAGGCATAGAGGAAACCAATTCTTTCCCAGCCCCATaGGGAAGTTATCTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TIQSILQLPKFKGIEETNSFPAP*GSYLAS Trigger: TGAAGCCAGATAACTTCCTCATGGGGCTGGGAAAGA...ATTGGTTTCCTCTATGCCTTTGAACTTGGGAAGTTGCAGAATAGACTGAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GTCACTAGTAAAGCCATTGGTAACAGAGTAGATCAGCCATGCATTGTCTGCCCTTCATTTTGTAGATCTTaGTCTCAATGTGGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTSKAIGNRVDQPCIVCPSFCRS*SQCGAE Trigger: CTCAGCTCCACATTGAGAGCAAGATCTACAAAATGA...AGGGCAGACAATGCATGGCTGATCTACTCTGTTACCAATGGCTTTACTAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAAAATCAGAGATGGACCCACACACATGTACTGCACCCACTTCTCAGATATACGACTTATCATTTaGTCAGCAAGCAACAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TGKIRDGPTHMYCTHFSDIRLII*SASNRT Trigger: TGTTCTGTTGCTTGCTGACCAAATGATAAGTCGTAT...ATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATTTTCCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| CDS-3UTR CCA 90 bp | TCCTGCCTTCTGTTTATTCGACCCTCTGGAGGGCTGGTAAATTTCTCTATGTGGATACGACTTATCATTTaGTCAGCAAGCAACAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SCLLFIRPSGGLVNFSMWIRLII*SASNRT Trigger: TGTTCTGTTGCTTGCTGACCAAATGATAAGTCGTAT...CCACATAGAGAAATTTACCAGCCCTCCAGAGGGTCGAATAAACAGAAGGCAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGGAAAATCAGAGATGGACCCACACACATGTACTGCACCCACTTCTCAGATAGAAATTCAGGTATGTaGCAAATTCAGAAGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGKIRDGPTHMYCTHFSDRNSGM*QIQKDS Trigger: GCTATCCTTCTGAATTTGCCACATACCTGAATTTCT...ATCTGAGAAGTGGGTGCAGTACATGTGTGTGGGTCCATCTCTGATTTTCCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR GCA 90 bp | GTACTCAATACGACTTATCATTTGGTCAGCAAGCAACAGAACAGTTTTGAGACTTCATTTTGTAGATCTTaGTCTCAATGTGGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLNTTYHLVSKQQNSFETSFCRS*SQCGAE Trigger: CTCAGCTCCACATTGAGAGCAAGATCTACAAAATGA...AGTCTCAAAACTGTTCTGTTGCTTGCTGACCAAATGATAAGTCGTATTGAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146837.2 |
||
| CDS GCA 90 bp | AGCGGCCGTTGGTGTCTGGCCGAGGCCGGTGCCCGGGCCCTCGGCTaGGGGGATGCCGAACGTCCACTCCGGCCCTCCGCAGGCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGRWCLAEAGARALG*GDAERPLRPSAGLG Trigger: GCCGAGGCCTGCGGAGGGCCGGAGTGGACGTTCGGCATCCCCGCAGCCGAGGGCCCGGGCACCGGCCTCGGCCAGACACCAACGGCCGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154483.8 |
||
| CDS GCA 90 bp | CGTCGTGGGCGCTGGGGTCGGCAGCGGGCACCTTGGCGGGCCGCGTaGAGCCGGAGAGACGCCATGTCCCTGCTCCTCTGTGAGGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRGRWGRQRAPWRAA*SRRDAMSLLLCEVD Trigger: GTCCACCTCACAGAGGAGCAGGGACATGGCGTCTCTCCGGCTGCACGCGGCCCGCCAAGGTGCCCGCTGCCGACCCCAGCGCCCACGACG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS CCA 90 bp | AACTTCTTCTCCCGCAGCAATGTCCGTACAGCGGCCGTTGGTGTCTaGCCGAGGCCGGTGCCCGGGCCCTCGGCTGCGGGGATGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NFFSRSNVRTAAVGV*PRPVPGPSAAGMPN Trigger: GTTCGGCATCCCCGCAGCCGAGGGCCCGGGCACCGGCCTCGGCCAGACACCAACGGCCGCTGTACGGACATTGCTGCGGGAGAAGAAGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154483.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCGTCCCAGCCCCATGATAACTGAGCTCACACGGGGCCACGGTGGCAGCGAGCCGCTGCCGATCTaGCGGCCCAGTCGGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALRPSPMITELTRGHGGSEPLPI*RPSRYL Trigger: CAGGTACCGACTGGGCCGCAAGATCGGCAGCGGCTC...GCTGCCACCGTGGCCCCGTGTGAGCTCAGTTATCATGGGGCTGGGACGAAGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| CDS-3UTR CAA 90 bp | CACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGGGCTCGCCCTGGGCACCTCATGCGAGAGGTATCTaGTCGGCCCGTGAGATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HLLTSVQPMLSSGSPWAPHARGI*SAREIR Trigger: TCTGATCTCACGGGCCGACAAGATACCTCTCGCATG...AGGTGCCCAGGGCGAGCCCGAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CAA 90 bp | TGGCACTTCAGGGTTGATTCCCTTTGGCCACTGGTCCCTCTGGGCAAACCATGGGAGCCGCTGCCGATCTaGCGGCCCAGTCGGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: WHFRVDSLWPLVPLGKPWEPLPI*RPSRYL Trigger: CAGGTACCGACTGGGCCGCAAGATCGGCAGCGGCTC...CCATGGTTTGCCCAGAGGGACCAGTGGCCAAAGGGAATCAACCCTGAAGTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CAA 90 bp | ACCTCTGTCCAGCCCATGCTCAGCTCGGGCTCGCCCTGGGCACCTCACACCCACCGGCTGGCACCAAATTaGAGCATGTTCCAGTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSVQPMLSSGSPWAPHTHRLAPN*SMFQSN Trigger: GTTCGACTGGAACATGCTCAAATTTGGTGCCAGCCG...GTGGGTGTGAGGTGCCCAGGGCGAGCCCGAGCTGAGCATGGGCTGGACAGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGAGCTGAGAGGCTCCGGCTGGCACCAAATTaGAGCATGTTCCAGTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VGSSGSAGPPPLVGAERLRLAPN*SMFQSN Trigger: GTTCGACTGGAACATGCTCAAATTTGGTGCCAGCCG...GAGCCTCTCAGCTCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CAA 90 bp | GTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGGAGCCGCTGCCGATCTaGCGGCCCAGTCGGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: VNFSMWSAPADLCPAHAQEPLPI*RPSRYL Trigger: CAGGTACCGACTGGGCCGCAAGATCGGCAGCGGCTC...CTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTAGCTGCGGTGGGATCATCAGGGAGCGCAGGTCCGCCACCACTGGTGGGATTGACACATTCAAGCTaGATGGCAACTTCTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVAAVGSSGSAGPPPLVGLTHSS*MATSSP Trigger: GGGAGAAGAAGTTGCCATCAAGCTTGAATGTGTCAA...TCCCACCAGTGGTGGCGGACCTGCGCTCCCTGATGATCCCACCGCAGCTACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CAA 90 bp | CCACTGGTCCCTCTGGGCAAACCATGGTGTGTTTCTAGGACAGCCAGCTCCCTGGGGAGAGAGCCCAGGTaGAAGTACATCAGCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLVPLGKPWCVSRTASSLGREPR*KYISTY Trigger: GTACGTGCTGATGTACTTCAACCTGGGCTCTCTCCC...CAGGGAGCTGGCTGTCCTAGAAACACACCATGGTTTGCCCAGAGGGACCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGGGGCATCCCGATACTTCTaGGCCAGCCCAAAGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FSMWSAPADLCPAHAQLGASRYF*ASPKSM Trigger: CATTGACTTTGGGCTGGCCAAGAAGTATCGGGATGC...CCCGAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTCGGGCGTCGTAGGAGAAGCCTaGGCGATGGAACAGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLCGQHLLTSVQPMLSSGVVGEA*AMEQIS Trigger: AGAAATCTGTTCCATCGCCAAGGCTTCTCCTACGAC...GCCCGAGCTGAGCATGGGCTGGACAGAGGTCAGCAGGTGCTGACCACATAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGCTCTTCGTCCCAGCCCCATGATAACTGAGCTCACACGGGGCCACGGTTTGACACATTCAAGCTaGATGGCAACTTCTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASALRPSPMITELTRGHGLTHSS*MATSSP Trigger: GGGAGAAGAAGTTGCCATCAAGCTTGAATGTGTCAA...ACCGTGGCCCCGTGTGAGCTCAGTTATCATGGGGCTGGGACGAAGAGCAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGGGCTGGTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTCTGTCCAGGGAGAGAGCCCAGGTaGAAGTACATCAGCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGGLVNFSMWSAPADLCPGREPR*KYISTY Trigger: GTACGTGCTGATGTACTTCAACCTGGGCTCTCTCCC...TGGACAGAGGTCAGCAGGTGCTGACCACATAGAGAAATTTACCAGCCCTCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCACCACACCTTTCTGGAGGTCACGCAGCATGTGGAGGTGAAGGTTTGTTTGTCGTAGGAGAAGCCTaGGCGATGGAACAGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VAPHLSGGHAACGGEGLFVVGEA*AMEQIS Trigger: AGAAATCTGTTCCATCGCCAAGGCTTCTCCTACGAC...AAACAAACCTTCACCTCCACATGCTGCGTGACCTCCAGAAAGGTGTGGTGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
||
| CDS-3UTR CAA 90 bp | CACGCCATGGCAGTTGTACCTGCTCTGATGACTGCAGGCTATCAGTTTACAGTGGTCGTAGGAGAAGCCTaGGCGATGGAACAGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HAMAVVPALMTAGYQFTVVVGEA*AMEQIS Trigger: AGAAATCTGTTCCATCGCCAAGGCTTCTCCTACGAC...CACTGTAAACTGATAGCCTGCAGTCATCAGAGCAGGTACAACTGCCATGGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| CDS-3UTR CAA 90 bp | ACAAACGCACAGCTCAGAGACTGGTCACCAAGACACAGGTTGATACACACATTCCATGCGAGAGGTATCTaGTCGGCCCGTGAGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: TNAQLRDWSPRHRLIHTFHARGI*SAREIR Trigger: TCTGATCTCACGGGCCGACAAGATACCTCTCGCATG...GAATGTGTGTATCAACCTGTGTCTTGGTGACCAGTCTCTGAGCTGTGCGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| CDS-3UTR CAA 90 bp | TGTCCATTTAGTTTGTGTTTTGATTCCCCATGTGCATCGCTGGGTGAGTGGCCTGCATCCCGATACTTCTaGGCCAGCCCAAAGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: CPFSLCFDSPCASLGEWPASRYF*ASPKSM Trigger: CATTGACTTTGGGCTGGCCAAGAAGTATCGGGATGC...AGGCCACTCACCCAGCGATGCACATGGGGAATCAAAACACAAACTAAATGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| CDS-3UTR CAA 90 bp | TCTGAGCAGAGAGCCCATGACAAACCCAAATGGCATCTGCATGAGACTATTCAGCGGCTGGCACCAAATTaGAGCATGTTCCAGTCGAAC | + |
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Preference number: 5 (lower is better) Translates to: SEQRAHDKPKWHLHETIQRLAPN*SMFQSN Trigger: GTTCGACTGGAACATGCTCAAATTTGGTGCCAGCCG...CTGAATAGTCTCATGCAGATGCCATTTGGGTTTGTCATGGGCTCTCTGCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| CDS-3UTR CAA 90 bp | GTCACTAGTAAAGCCATTGGTAACAGAGTAGATCAGCCATGCATTGTCTGCCCTGCATCCCGATACTTCTaGGCCAGCCCAAAGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: VTSKAIGNRVDQPCIVCPASRYF*ASPKSM Trigger: CATTGACTTTGGGCTGGCCAAGAAGTATCGGGATGC...AGGGCAGACAATGCATGGCTGATCTACTCTGTTACCAATGGCTTTACTAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| CDS-3UTR CAA 90 bp | GGCTATCAGTTTACAGTGGGAAAGAGTAAGCAAGATGCCCAAATTAGGCTGATGGGGAGAGAGCCCAGGTaGAAGTACATCAGCACGTAC | + |
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Preference number: 5 (lower is better) Translates to: GYQFTVGKSKQDAQIRLMGREPR*KYISTY Trigger: GTACGTGCTGATGTACTTCAACCTGGGCTCTCTCCC...CATCAGCCTAATTTGGGCATCTTGCTTACTCTTTCCCACTGTAAACTGATAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| CDS CCA 90 bp | CAGGTTTGTCATCAAAACGTAAGGAACGGCAGAAATTCAGGTATGTaGCAAATTCAGAAGGATAGCCCTTGCACAGCACTTCAATGGGAG | + |
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Preference number: 5 (lower is better) Translates to: QVCHQNVRNGRNSGM*QIQKDSPCTALQWE Trigger: CTCCCATTGAAGTGCTGTGCAAGGGCTATCCTTCTGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTACGTTTTGATGACAAACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 ENSMUST00000239115.2 |
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| CDS-3UTR CAA 90 bp | ACTATTCAGTCTATTCTGCAACTTCCCAAGTTCAAAGGCATAGAGGAAACCAATCATGCGAGAGGTATCTaGTCGGCCCGTGAGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: TIQSILQLPKFKGIEETNHARGI*SAREIR Trigger: TCTGATCTCACGGGCCGACAAGATACCTCTCGCATG...ATTGGTTTCCTCTATGCCTTTGAACTTGGGAAGTTGCAGAATAGACTGAATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 |
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| CDS GCA 72 bp | TGGTGTCTGGCCGAGGCCGGTGCCCGGGCCCTCGGCTaGGGGGATGCCGAACGTCCACTCCGGCCCTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: WCLAEAGARALG*GDAERPLRPSA Trigger: TGCGGAGGGCCGGAGTGGACGTTCGGCATCCCCGCAGCCGAGGGCCCGGGCACCGGCCTCGGCCAGACACCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154483.8 |
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| CDS GCA 72 bp | TCCGTACAGCGGCCGTTGGTGTCTGGCCGAGGCCGGTaGCCGGGCCCTCGGCTGCGGGGATGCCGAACGTCC | + |
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Preference number: 6 (lower is better) Translates to: SVQRPLVSGRGR*PGPRLRGCRTS Trigger: GGACGTTCGGCATCCCCGCAGCCGAGGGCCCGGGCACCGGCCTCGGCCAGACACCAACGGCCGCTGTACGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154483.8 |
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| CDS CCA 72 bp | TCCCGCAGCAATGTCCGTACAGCGGCCGTTGGTGTCTaGCCGAGGCCGGTGCCCGGGCCCTCGGCTGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: SRSNVRTAAVGV*PRPVPGPSAAG Trigger: CCCCGCAGCCGAGGGCCCGGGCACCGGCCTCGGCCAGACACCAACGGCCGCTGTACGGACATTGCTGCGGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154483.8 |
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| CDS GCA 72 bp | CGCTGGGGTCGGCAGCGGGCACCTTGGCGGGCCGCGTaGAGCCGGAGAGACGCCATGTCCCTGCTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RWGRQRAPWRAA*SRRDAMSLLLC Trigger: ACAGAGGAGCAGGGACATGGCGTCTCTCCGGCTGCACGCGGCCCGCCAAGGTGCCCGCTGCCGACCCCAGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
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| CDS CAA 90 bp | TCAGTAGGTGGTACGTCGTGGGCGCTGGGGTCGGCAGCGGGCACCTaGGCGGGCCGCGTGCAGCCGGAGAGACGCCATGTCCCTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SVGGTSWALGSAAGT*AGRVQPERRHVPAP Trigger: AGGAGCAGGGACATGGCGTCTCTCCGGCTGCACGCGGCCCGCCAAGGTGCCCGCTGCCGACCCCAGCGCCCACGACGTACCACCTACTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239115.2 |
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| CDS CCA 72 bp | CTTCTTCTCCCGCAGCAATGTCCGTACAGCGGCCGTTaGTGTCTGGCCGAGGCCGGTGCCCGGGCCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: LLLPQQCPYSGR*CLAEAGARALG Trigger: GCCGAGGGCCCGGGCACCGGCCTCGGCCAGACACCAACGGCCGCTGTACGGACATTGCTGCGGGAGAAGAAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154483.8 |
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| CDS CAA 72 bp | ACTTCTTCTCCCGCAGCAATGTCCGTACAGCGGCCGTaGGTGTCTGGCCGAGGCCGGTGCCCGGGCCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: TSSPAAMSVQRP*VSGRGRCPGPR Trigger: CCGAGGGCCCGGGCACCGGCCTCGGCCAGACACCAACGGCCGCTGTACGGACATTGCTGCGGGAGAAGAAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154483.8 |
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| CDS TCA 72 bp | CATGCGAGAGGTATCTTGTCGGCCCGTGAGATCAGATaGGGAGACGTTGACTGGGGCCCCACGGTGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: HARGILSAREIR*GDVDWGPTVQP Trigger: CGGCTGCACCGTGGGGCCCCAGTCAACGTCTCCTCATCTGATCTCACGGGCCGACAAGATACCTCTCGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 ENSMUST00000239115.2 |
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| CDS CAA 72 bp | TCTCGTTCCATGCCAGAGACAGGCCTCGGAGAGGTGTaGGCCGTGTGTGAGGTAGGGGTAAGGGGCGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SRSMPETGLGEV*AVCEVGVRGVG Trigger: CCCAACGCCCCTTACCCCTACCTCACACACGGCCAACACCTCTCCGAGGCCTGTCTCTGGCATGGAACGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 ENSMUST00000239115.2 |
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| CDS GCA 72 bp | GGTGCAGCCGCATACTCACTTTCCGTTCTCGTTCCATaGCAGAGACAGGCCTCGGAGAGGTGTTGGCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: GAAAYSLSVLVP*QRQASERCWPC Trigger: ACACGGCCAACACCTCTCCGAGGCCTGTCTCTGGCATGGAACGAGAACGGAAAGTGAGTATGCGGCTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 ENSMUST00000239115.2 |
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| CDS CAA 72 bp | GTATCTTGTCGGCCCGTGAGATCAGATGAGGAGACGTaGACTGGGGCCCCACGGTGCAGCCGCATACTCACT | + |
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Preference number: 6 (lower is better) Translates to: VSCRPVRSDEET*TGAPRCSRILT Trigger: AGTGAGTATGCGGCTGCACCGTGGGGCCCCAGTCAACGTCTCCTCATCTGATCTCACGGGCCGACAAGATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 ENSMUST00000239115.2 |
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| CDS CAA 90 bp | ATGCGAGAGGTATCTTGTCGGCCCGTGAGATCAGATGAGGAGACGTaGACTGGGGCCCCACGGTGCAGCCGCATACTCACTTTCCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: MREVSCRPVRSDEET*TGAPRCSRILTFRS Trigger: AGAACGGAAAGTGAGTATGCGGCTGCACCGTGGGGCCCCAGTCAACGTCTCCTCATCTGATCTCACGGGCCGACAAGATACCTCTCGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 ENSMUST00000239115.2 |
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| CDS GCA 72 bp | TTCTTCTCGATCCCGGCGTTCCCGCTCAGCATCATCTaGAGCCCGGCTGGCACCAAATTTGAGCATGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FFSIPAFPLSII*SPAGTKFEHVP Trigger: TGGAACATGCTCAAATTTGGTGCCAGCCGGGCTGCAGATGATGCTGAGCGGGAACGCCGGGATCGAGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 ENSMUST00000239115.2 |
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| CDS CCA 72 bp | CATCAAAACGTAAGGAACGGCAGAAATTCAGGTATGTaGCAAATTCAGAAGGATAGCCCTTGCACAGCACTT | + |
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Preference number: 6 (lower is better) Translates to: HQNVRNGRNSGM*QIQKDSPCTAL Trigger: AAGTGCTGTGCAAGGGCTATCCTTCTGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTACGTTTTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018274.10 ENSMUST00000070575.14 ENSMUST00000239115.2 |
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