Pregenerated sensors for CSN1S1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070702Ensembl transcript IDs: ENSMUST00000094641.9, ENSMUST00000197157.2, ENSMUST00000197631.5, ENSMUST00000199506.5
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGGAGGTGGATGGAGAATaGAGGGTCCAGTCACATCAA | + |
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Preference number: 2 (lower is better) Translates to: GRMLCYLICSRQLKMNHWEVDGE*RVQSHQ Trigger: TTGATGTGACTGGACCCTCCATTCTCCATCCACCTC...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGATGAATAGAGAGACATaGGGTGGATGGAGAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: GRMLCYLICSRQLKMNHWMNRET*GGWRME Trigger: CTCCATTCTCCATCCACCTCATGTCTCTCTATTCAT...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAAAGAGGCTCCATAGAATaGATAGAGAGACATGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FHNRNLLKALILSAQMMQRGSIE*IERHEV Trigger: CACCTCATGTCTCTCTATTCATTCTATGGAGCCTCT...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| 3UTR-3UTR CCA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGCTCAAGATGAATCATTaGCCTCTATATGGTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: RICLGKVSLRKDAMLSNMLKMNH*PLYGVL Trigger: TAAAACACCATATAGAGGCCAATGATTCATCTTGAG...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| 3UTR-3UTR CAA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAAACTCAAGATGAATCATaGGCCTCTATATGGTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: FHNRNLLKALILSAQMMQTQDES*ASIWCF Trigger: AAAACACCATATAGAGGCCAATGATTCATCTTGAGT...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | GGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCAGTGCCAGGGAAGGTTaGTGGGCCAGGAGAAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: GGWRMEGPVTSNVITVEFSAREG*WARRSC Trigger: GCAACTTCTCCTGGCCCAGCAACCTTCCCTGGCACT...GAACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTGCCAGGGAAGGTTGCTaGGCCAGGAGAAGTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RWMENGGSSHIKCYNCGVAREGC*ARRSCC Trigger: ACAGCAACTTCTCCTGGCCCAGCAACCTTCCCTGGC...AACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR TCA 90 bp | GGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCATTTGTGGGAAGGGCTaGACAGAGAACTGGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GGWRMEGPVTSNVITVEFICGKG*TENWAS Trigger: ACTGGCCCAGTTCTCTGTTCAGCCCTTCCCACAAAT...GAACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094641.9 |
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| CDS-3UTR GCA 90 bp | GGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCCAGGGAAGCTTGCTGTaGCAGGAAAGCTTGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GGWRMEGPVTSNVITVEFQGSLL*QESLLY Trigger: GTACAGCAAGCTTTCCTGGCACAGCAAGCTTCCCTG...GAACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | GGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCAAGCTTGCTGAGCCATaGAAGGTTGCTGAAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGWRMEGPVTSNVITVEFKLAEP*KVAETG Trigger: CCCTGTTTCAGCAACCTTCCATGGCTCAGCAAGCTT...GAACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR TCA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAACCTCACTTGATGAGCTaGTTGAAGAGTCTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPETGKLAEAGKVAKEEKPHLMS*LKSLPE Trigger: CTCAGGAAGACTCTTCAATCAGCTCATCAAGTGAGG...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
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| CDS-3UTR TCA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAATACTTAAACTGTCTCTaGAGCTGTTCCAGGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SPETGKLAEAGKVAKEEKYLNCL*SCSRVH Trigger: GTGCACCCTGGAACAGCTTCAGAGACAGTTTAAGTA...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
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| CDS-3UTR TCA 90 bp | AGGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTTGGCTCAGTCTTGGATaGTGTTTCTGTGCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RWMENGGSSHIKCYNCGVWLSLG*CFCARE Trigger: TTCCCTGGCACAGAAACATCATCCAAGACTGAGCCA...AACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAAAGTGCCAGGGAAGGTTaGTGGGCCAGGAGAAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQSAREG*WARRSC Trigger: GCAACTTCTCCTGGCCCAGCAACCTTCCCTGGCACT...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | AGGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTTGGATGATGTTTCTGTaGCAGGGAAGCTTGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RWMENGGSSHIKCYNCGVWMMFL*QGSLLC Trigger: GCACAGCAAGCTTCCCTGGCACAGAAACATCATCCA...AACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGGCCAGGGAAGGTTGCTaGGCCAGGAGAAGTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRMLCYLICSRQLKMNHWAREGC*ARRSCC Trigger: ACAGCAACTTCTCCTGGCCCAGCAACCTTCCCTGGC...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAATGGGCCAGGAGAAGTTaGTGTAGCAGGGAAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQWARRS*CSREAC Trigger: GCAAGCTTCCCTGCTACAGCAACTTCTCCTGGCCCA...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAATGTGCTGGGGAAACTTaGAGTGCCAGGGAAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQCAGET*SAREGC Trigger: GCAACCTTCCCTGGCACTGCAAGTTTCCCCAGCACA...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | GGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCTGTTCCAGGGTGCACTaGTTGAGCATGTCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRMEGPVTSNVITVEFCSRVH*LSMSSF Trigger: AAATGAAGACATGCTCAACCAGTGCACCCTGGAACA...GAACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAATGTTCCAGGGTGCACTaGTTGAGCATGTCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SPETGKLAEAGKVAKEEKCSRVH*LSMSSF Trigger: AAATGAAGACATGCTCAACCAGTGCACCCTGGAACA...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
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| CDS-3UTR CCA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAAGCCAGGGAAGCTTTCTaGAGAAGTTGGTTGTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPETGKLAEAGKVAKEEKAREAF*RSWLYL Trigger: TAAGTACAACCAACTTCTCCAGAAAGCTTCCCTGGC...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
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| CDS-3UTR TCA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGAGCAGGGAAGGTTGCTaGAACAGGGAAGCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GRMLCYLICSRQLKMNHWSREGC*NREACC Trigger: ACAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGCT...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGTGGGCCAGGAGAAGTTaGTGTAGCAGGGAAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RICLGKVSLRKDAMLSNMWARRS*CSREAC Trigger: GCAAGCTTCCCTGCTACAGCAACTTCTCCTGGCCCA...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGTGTGCTGGGGAAACTTaGAGTGCCAGGGAAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RICLGKVSLRKDAMLSNMCAGET*SAREGC Trigger: GCAACCTTCCCTGGCACTGCAAGTTTCCCCAGCACA...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCAGGGAAGCTTGCTGTaGCAGGAAAGCTTGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: GRMLCYLICSRQLKMNHWQGSLL*QESLLY Trigger: GTACAGCAAGCTTTCCTGGCACAGCAAGCTTCCCTG...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTTGTTCCAGGGTGCACTaGTTGAGCATGTCTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: RWMENGGSSHIKCYNCGVCSRVH*LSMSSF Trigger: AAATGAAGACATGCTCAACCAGTGCACCCTGGAACA...AACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTGCCAGGGAAGCTTTCTaGAGAAGTTGGTTGTACTTA | + |
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Preference number: 4 (lower is better) Translates to: RWMENGGSSHIKCYNCGVAREAF*RSWLYL Trigger: TAAGTACAACCAACTTCTCCAGAAAGCTTCCCTGGC...AACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAAGGAAGATTGCTGTGCTaGGGAAACTTGCAGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQGRLLC*GNLQCQ Trigger: CTGGCACTGCAAGTTTCCCCAGCACAGCAATCTTCC...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR TCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAATGGCTCAGTCTTGGATaGTGTTTCTGTGCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQWLSLG*CFCARE Trigger: TTCCCTGGCACAGAAACATCATCCAAGACTGAGCCA...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR TCA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAAGTAAAAATTCTCACCTaGAACAGGGAAGCTTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: SPETGKLAEAGKVAKEEKVKILT*NREACL Trigger: TAAGCAAGCTTCCCTGTTTCAGGTGAGAATTTTTAC...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
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| CDS-3UTR GCA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCTGAGCACTTGCCATTaGTTGTTCCTCAGATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRMLCYLICSRQLKMNHWLSTCH*LFLRCC Trigger: GCAGCATCTGAGGAACAAGCAATGGCAAGTGCTCAG...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGCAGGGAAGATTGCTGTaGTGGGGAAACTTGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: RICLGKVSLRKDAMLSNMQGRLL*WGNLQC Trigger: GCACTGCAAGTTTCCCCAGCACAGCAATCTTCCCTG...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGTGTACCAGGGAAGATTaGTGTGCTGGGGAAACTTGC | + |
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Preference number: 4 (lower is better) Translates to: GRMLCYLICSRQLKMNHWCTRED*CAGETC Trigger: GCAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACA...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAATGTACCAGGGAAGATTaGTGTGCTGGGGAAACTTGC | + |
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Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQCTRED*CAGETC Trigger: GCAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACA...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAATGTGCCAGGAAAGCTTaGTGTACCAGGGAAGATTGC | + |
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Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQCARKA*CTREDC Trigger: GCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACA...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | TGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCCTCTATATGGTGGAAGATTGCTGTGCTaGGGAAACTTGCAGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CYLICSRQLKMNHWPLYGGRLLC*GNLQCQ Trigger: CTGGCACTGCAAGTTTCCCCAGCACAGCAATCTTCC...ACCATATAGAGGCCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR CCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAAGGACTGGCTCAGTCTTaGATGATGTTTCTGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQGLAQS*MMFLCQ Trigger: CTGGCACAGAAACATCATCCAAGACTGAGCCAGTCC...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR TCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAACCTCACTTGATGAGCTaGTTGAAGAGTCTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQPHLMS*LKSLPE Trigger: CTCAGGAAGACTCTTCAATCAGCTCATCAAGTGAGG...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR TCA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGACCAGGGAAGGTTGCTaGAACAGGGAAGCTTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: RICLGKVSLRKDAMLSNMTREGC*NREACL Trigger: TAAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGGT...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR TCA 90 bp | TGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCCTCTATATGGTACCAGGGAAGGTTGCTaGAACAGGGAAGCTTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: CYLICSRQLKMNHWPLYGTREGC*NREACL Trigger: TAAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGGT...ACCATATAGAGGCCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | TGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCCTCTATATGGTTGTGCCAGGAAAGCTTaGTGTACCAGGGAAGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: CYLICSRQLKMNHWPLYGCARKA*CTREDC Trigger: GCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACA...ACCATATAGAGGCCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGTGGATGATGTTTCTGTaGCAGGGAAGCTTGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RICLGKVSLRKDAMLSNMWMMFL*QGSLLC Trigger: GCACAGCAAGCTTCCCTGGCACAGAAACATCATCCA...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | TGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCCTCTATATGGTAGAGAACTGGGCCAGTaGCTGATCCACTACACTCAT | + |
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Preference number: 4 (lower is better) Translates to: CYLICSRQLKMNHWPLYGRELGQ*LIHYTH Trigger: ATGAGTGTAGTGGATCAGGCACTGGCCCAGTTCTCT...ACCATATAGAGGCCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS-3UTR GCA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGAGAGAACTGGGCCAGTaGCTGATCCACTACACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RICLGKVSLRKDAMLSNMRELGQ*LIHYTH Trigger: ATGAGTGTAGTGGATCAGGCACTGGCCCAGTTCTCT...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CCA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGGGACTGGCTCAGTCTTaGATGATGTTTCTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RICLGKVSLRKDAMLSNMGLAQS*MMFLCQ Trigger: CTGGCACAGAAACATCATCCAAGACTGAGCCAGTCC...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR TCA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGCCTCACTTGATGAGCTaGTTGAAGAGTCTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RICLGKVSLRKDAMLSNMPHLMS*LKSLPE Trigger: CTCAGGAAGACTCTTCAATCAGCTCATCAAGTGAGG...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR TCA 90 bp | TGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCCTCTATATGGTTACTTAAACTGTCTCTaGAGCTGTTCCAGGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CYLICSRQLKMNHWPLYGYLNCL*SCSRVH Trigger: GTGCACCCTGGAACAGCTTCAGAGACAGTTTAAGTA...ACCATATAGAGGCCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR GCA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCTGTTCTGTCAGAAGTaGTCTCTGTCTGTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRMLCYLICSRQLKMNHWLFCQK*SLSVHV Trigger: AACATGAACAGACAGAGAGCACTTCTGACAGAACAG...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR GCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAACTGTTCTGTCAGAAGTaGTCTCTGTCTGTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQLFCQK*SLSVHV Trigger: AACATGAACAGACAGAGAGCACTTCTGACAGAACAG...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAAATACTGGAAGATTTGTaGGAAGGGCTGAACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQILEDL*EGLNRE Trigger: TTCTCTGTTCAGCCCTTCCCACAAATCTTCCAGTAT...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094641.9 |
||
| CDS-3UTR GCA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAAAAATTTCCTCACTGCTaGTATGCTGTTGCTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FHNRNLLKALILSAQMMQKFPHC*YAVAEF Trigger: AAACTCAGCAACAGCATAGCAGCAGTGAGGAAATTT...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR GCA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGAAATTTCCTCACTGCTaGTATGCTGTTGCTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRMLCYLICSRQLKMNHWKFPHC*YAVAEF Trigger: AAACTCAGCAACAGCATAGCAGCAGTGAGGAAATTT...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS GCA 90 bp | AGCTTGCTGTGCCAGGAAAGCTTGCTGTACCAGGGAAGATTGCTGTaGTGGGGAAACTTGCAGTGCCAGGGAAGGTTGCTGGGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLCQESLLYQGRLL*WGNLQCQGRLLGQE Trigger: CTCCTGGCCCAGCAACCTTCCCTGGCACTGCAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACAGCAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS GCA 90 bp | AGGGAAGCTTGCTGTGCCAGGAAAGCTTGCTGTACCAGGGAAGATTaGTGTGCTGGGGAAACTTGCAGTGCCAGGGAAGGTTGCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: REACCARKACCTRED*CAGETCSAREGCWA Trigger: GGCCCAGCAACCTTCCCTGGCACTGCAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACAGCAAGCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS CCA 90 bp | TTGCTGTGCCAGGAAAGCTTGCTGTACCAGGGAAGATTGCTGTGCTaGGGAAACTTGCAGTGCCAGGGAAGGTTGCTGGGCCAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLCQESLLYQGRLLC*GNLQCQGRLLGQEK Trigger: CTTCTCCTGGCCCAGCAACCTTCCCTGGCACTGCAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS CCA 90 bp | GCTGGGCCAGGAGAAGTTGCTGTAGCAGGGAAGCTTGCTGAGCCATaGAAGGTTGCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGPGEVAVAGKLAEP*KVAETGKLAEAGKV Trigger: AACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGCAACCTTCCATGGCTCAGCAAGCTTCCCTGCTACAGCAACTTCTCCTGGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS CCA 90 bp | TGGAAAGTAAGCCCAAAGGGGAAAGGCATCATACTGGAAGATTTGTaGGAAGGGCTGAACAGAGAACTGGGCCAGTGCCTGATCCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: WKVSPKGKGIILEDL*EGLNRELGQCLIHY Trigger: GTAGTGGATCAGGCACTGGCCCAGTTCTCTGTTCAGCCCTTCCCACAAATCTTCCAGTATGATGCCTTTCCCCTTTGGGCTTACTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094641.9 |
||
| CDS-3UTR CAA 90 bp | AGGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCAGTGCCAGGGAAGGTaGCTGGGCCAGGAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RWMENGGSSHIKCYNCGVQCQGR*LGQEKL Trigger: CAACTTCTCCTGGCCCAGCAACCTTCCCTGGCACTG...AACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | GGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCCTGTACCAGGGAAGATaGCTGTGCTGGGGAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGWRMEGPVTSNVITVEFLYQGR*LCWGNL Trigger: CAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACAG...GAACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS TCA 90 bp | GCCAGGGAAGCTTTCTGGAGAAGTTGGTTGTACTTAAACTGTCTCTaGAGCTGTTCCAGGGTGCACTGGTTGAGCATGTCTTCATTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AREAFWRSWLYLNCL*SCSRVHWLSMSSFA Trigger: TGCAAATGAAGACATGCTCAACCAGTGCACCCTGGAACAGCTTCAGAGACAGTTTAAGTACAACCAACTTCTCCAGAAAGCTTCCCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAAAGTCTTCCTGAGCACTaGCCATTGCTTGTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPETGKLAEAGKVAKEEKSLPEH*PLLVPQ Trigger: CTGAGGAACAAGCAATGGCAAGTGCTCAGGAAGACT...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
||
| CDS-3UTR CAA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAATCCAGGGTGCACTGGTaGAGCATGTCTTCATTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPETGKLAEAGKVAKEEKSRVHW*SMSSFA Trigger: TGCAAATGAAGACATGCTCAACCAGTGCACCCTGGA...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCTGTACCAGGGAAGATaGCTGTGCTGGGGAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RWMENGGSSHIKCYNCGVLYQGR*LCWGNL Trigger: CAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACAG...AACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS TCA 90 bp | GCTTCCTCAGATTCCTCACTTGATGAGCTGATTGAAGAGTCTTCCTaGGCACTTGCCATTGCTTGTTCCTCAGATGCTGCATCCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASSDSSLDELIEESS*ALAIACSSDAASIV Trigger: AACTATGGATGCAGCATCTGAGGAACAAGCAATGGCAAGTGCTCAGGAAGACTCTTCAATCAGCTCATCAAGTGAGGAATCTGAGGAAGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 ENSMUST00000199506.5 |
||
| CDS GCA 90 bp | AATTTCCTCACTGCTGCTATGCTGTTGCTGAGTTTGACTGCTAACTaGATTTCTACTATGAAGTCTGGGCATAGCAAAAGCAGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NFLTAAMLLLSLTAN*ISTMKSGHSKSSSH Trigger: GTGGCTGCTGCTTTTGCTATGCCCAGACTTCATAGTAGAAATGCAGTTAGCAGTCAAACTCAGCAACAGCATAGCAGCAGTGAGGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGCTGTGCTGGGGAAACTaGCAGTGCCAGGGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RICLGKVSLRKDAMLSNMLCWGN*QCQGRL Trigger: CAACCTTCCCTGGCACTGCAAGTTTCCCCAGCACAG...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS GCA 90 bp | TCTCTGAAGCTGTTCCAGGGTGCACTGGTTGAGCATGTCTTCATTTaGAATGTTTTTCTGCTCAGTGATATTGGGAATAGCTTCCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLKLFQGALVEHVFI*NVFLLSDIGNSFLR Trigger: TCTGAGGAAGCTATTCCCAATATCACTGAGCAGAAAAACATTGCAAATGAAGACATGCTCAACCAGTGCACCCTGGAACAGCTTCAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | GGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCTTCTGCTCAGTGATATaGGGAATAGCTTCCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGWRMEGPVTSNVITVEFFCSVI*GIASSD Trigger: ATCTGAGGAAGCTATTCCCAATATCACTGAGCAGAA...GAACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAATTCTGCTCAGTGATATaGGGAATAGCTTCCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPETGKLAEAGKVAKEEKFCSVI*GIASSD Trigger: ATCTGAGGAAGCTATTCCCAATATCACTGAGCAGAA...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCTGAAACAGGGAAGCTaGCTGAAGCAGGGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRMLCYLICSRQLKMNHWLKQGS*LKQGRL Trigger: CAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAG...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | AGGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTGTGTTAAGGACAGCTTaGGGAGTAAGGTACTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: RWMENGGSSHIKCYNCGVVLRTA*GVRYCI Trigger: TATGCAGTACCTTACTCCCAAAGCTGTCCTTAACAC...AACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS GCA 90 bp | TCCAGGGTGCACTGGTTGAGCATGTCTTCATTTGCAATGTTTTTCTaGTCAGTGATATTGGGAATAGCTTCCTCAGATTCCTCACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRVHWLSMSSFAMFF*SVILGIASSDSSLD Trigger: ATCAAGTGAGGAATCTGAGGAAGCTATTCCCAATATCACTGAGCAGAAAAACATTGCAAATGAAGACATGCTCAACCAGTGCACCCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAAGCATCCATAGTTACCTaGATTTCATCGTTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPETGKLAEAGKVAKEEKASIVT*ISSFCS Trigger: AGAACAGAACGATGAAATCAAGGTAACTATGGATGC...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGATGGAGAATGGAGGGTCCAGTCACATCAAATGTTATAACTGTGGAGTTCGCATCCATAGTTACCTaGATTTCATCGTTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGWRMEGPVTSNVITVEFASIVT*ISSFCS Trigger: AGAACAGAACGATGAAATCAAGGTAACTATGGATGC...GAACTCCACAGTTATAACATTTGATGTGACTGGACCCTCCATTCTCCATCCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAATCCAGGGTGCACTGGTaGAGCATGTCTTCATTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FHNRNLLKALILSAQMMQSRVHW*SMSSFA Trigger: TGCAAATGAAGACATGCTCAACCAGTGCACCCTGGA...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCCTCTATATGGTCTGAAACAGGGAAGCTaGCTGAAGCAGGGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CYLICSRQLKMNHWPLYGLKQGS*LKQGRL Trigger: CAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAG...ACCATATAGAGGCCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TCACCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTAAGGAAGAAAAACTGTACCAGGGAAGGTaGCTAAGGAAGAAAAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPETGKLAEAGKVAKEEKLYQGR*LRKKNN Trigger: ATTATTTTTCTTCCTTAGCAACCTTCCCTGGTACAG...TTTTTCTTCCTTAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCTGTCTAGGAAAGGTTAGCTTAAGGAAGGATGCTATGCTATCTAATATGAGTCTTCCTGAGCACTaGCCATTGCTTGTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RICLGKVSLRKDAMLSNMSLPEH*PLLVPQ Trigger: CTGAGGAACAAGCAATGGCAAGTGCTCAGGAAGACT...CATATTAGATAGCATAGCATCCTTCCTTAAGCTAACCTTTCCTAGACAGATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGTTGGAGACAATGGGCTaGAAGGTGTTAAGGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRMLCYLICSRQLKMNHWLETMG*KVLRTA Trigger: AGCTGTCCTTAACACCTTCAAGCCCATTGTCTCCAA...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCCTCTATATGGTTTGGAGACAATGGGCTaGAAGGTGTTAAGGACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CYLICSRQLKMNHWPLYGLETMG*KVLRTA Trigger: AGCTGTCCTTAACACCTTCAAGCCCATTGTCTCCAA...ACCATATAGAGGCCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCCTCTATATGGTGTGTTAAGGACAGCTTaGGGAGTAAGGTACTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: CYLICSRQLKMNHWPLYGVLRTA*GVRYCI Trigger: TATGCAGTACCTTACTCCCAAAGCTGTCCTTAACAC...ACCATATAGAGGCCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGGCATCCATAGTTACCTaGATTTCATCGTTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRMLCYLICSRQLKMNHWASIVT*ISSFCS Trigger: AGAACAGAACGATGAAATCAAGGTAACTATGGATGC...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGCCTCTATATGGTTTCTGCTCAGTGATATaGGGAATAGCTTCCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CYLICSRQLKMNHWPLYGFCSVI*GIASSD Trigger: ATCTGAGGAAGCTATTCCCAATATCACTGAGCAGAA...ACCATATAGAGGCCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | TTCCATAATAGAAACTTGTTAAAGGCCTTGATTCTCTCCGCTCAGATGATGCAAATGTCTCATTTGAACTaGGCTGTATGCATTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: FHNRNLLKALILSAQMMQMSHLN*AVCIHS Trigger: AGAATGAATGCATACAGCCAAGTTCAAATGAGACAT...TTGCATCATCTGAGCGGAGAGAATCAAGGCCTTTAACAAGTTTCTATTATGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS-3UTR CAA 90 bp | GGAAGGATGCTATGCTATCTAATATGCAGTAGACAACTCAAGATGAATCATTGGATGTCTCATTTGAACTaGGCTGTATGCATTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRMLCYLICSRQLKMNHWMSHLN*AVCIHS Trigger: AGAATGAATGCATACAGCCAAGTTCAAATGAGACAT...CCAATGATTCATCTTGAGTTGTCTACTGCATATTAGATAGCATAGCATCCTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
||
| CDS CAA 90 bp | CAGGGAAGCTTGCTGTGCCAGGAAAGCTTGCTGTACCAGGGAAGATaGCTGTGCTGGGGAAACTTGCAGTGCCAGGGAAGGTTGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QGSLLCQESLLYQGR*LCWGNLQCQGRLLG Trigger: GCCCAGCAACCTTCCCTGGCACTGCAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACAGCAAGCTTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CCA 72 bp | TGTGCTGGGGAAACTTGCAGTGCCAGGGAAGGTTGCTaGGCCAGGAGAAGTTGCTGTAGCAGGGAAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: CAGETCSAREGC*ARRSCCSREAC Trigger: GCAAGCTTCCCTGCTACAGCAACTTCTCCTGGCCCAGCAACCTTCCCTGGCACTGCAAGTTTCCCCAGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CCA 72 bp | CAGGAAAGCTTGCTGTACCAGGGAAGATTGCTGTGCTaGGGAAACTTGCAGTGCCAGGGAAGGTTGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QESLLYQGRLLC*GNLQCQGRLLG Trigger: GCCCAGCAACCTTCCCTGGCACTGCAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACAGCAAGCTTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS GCA 72 bp | TGCTGTGCCAGGAAAGCTTGCTGTACCAGGGAAGATTaGTGTGCTGGGGAAACTTGCAGTGCCAGGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: CCARKACCTRED*CAGETCSAREG Trigger: ACCTTCCCTGGCACTGCAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 72 bp | TTGCTGTGCCAGGAAAGCTTGCTGTACCAGGGAAGATaGCTGTGCTGGGGAAACTTGCAGTGCCAGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LLCQESLLYQGR*LCWGNLQCQGR Trigger: CCTTCCCTGGCACTGCAAGTTTCCCCAGCACAGCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CCA 72 bp | AGCCCAAAGGGGAAAGGCATCATACTGGAAGATTTGTaGGAAGGGCTGAACAGAGAACTGGGCCAGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SPKGKGIILEDL*EGLNRELGQCL Trigger: CAGGCACTGGCCCAGTTCTCTGTTCAGCCCTTCCCACAAATCTTCCAGTATGATGCCTTTCCCCTTTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094641.9 |
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| CDS CAA 72 bp | TTTCTGTGCCAGGGAAGCTTGCTGTGCCAGGAAAGCTaGCTGTACCAGGGAAGATTGCTGTGCTGGGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: FLCQGSLLCQES*LYQGRLLCWGN Trigger: GTTTCCCCAGCACAGCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACAGCAAGCTTCCCTGGCACAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 90 bp | CAGGGAAGCTTGCTGAAGCAGGGAAGGTTGCTGAAACAGGGAAGCTaGCTGTACCAGGGAAGGTTGCTGAAACAGGGAAGCTTGCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: QGSLLKQGRLLKQGS*LYQGRLLKQGSLLS Trigger: GCTAAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGGTACAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 90 bp | CAGGGAAGCTTGCTGAGCCATGGAAGGTTGCTGAAACAGGGAAGCTaGCTGAAGCAGGGAAGGTTGCTGAAACAGGGAAGCTTGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: QGSLLSHGRLLKQGS*LKQGRLLKQGSLLY Trigger: GTACAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGCAACCTTCCATGGCTCAGCAAGCTTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 90 bp | GTAGGACTGGCTCAGTCTTGGATGATGTTTCTGTGCCAGGGAAGCTaGCTGTGCCAGGAAAGCTTGCTGTACCAGGGAAGATTGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VGLAQSWMMFLCQGS*LCQESLLYQGRLLC Trigger: GCACAGCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACAGCAAGCTTCCCTGGCACAGAAACATCATCCAAGACTGAGCCAGTCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CCA 72 bp | GGAGAAGTTGCTGTAGCAGGGAAGCTTGCTGAGCCATaGAAGGTTGCTGAAACAGGGAAGCTTGCTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GEVAVAGKLAEP*KVAETGKLAEA Trigger: TGCTTCAGCAAGCTTCCCTGTTTCAGCAACCTTCCATGGCTCAGCAAGCTTCCCTGCTACAGCAACTTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 72 bp | TTGCTGAAACAGGGAAGCTTGCTGTACCAGGGAAGGTaGCTGAAACAGGGAAGCTTGCTTAGCCAGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LLKQGSLLYQGR*LKQGSLLSQGS Trigger: GCTTCCCTGGCTAAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGGTACAGCAAGCTTCCCTGTTTCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 72 bp | TTGCTGAAGCAGGGAAGGTTGCTGAAACAGGGAAGCTaGCTGTACCAGGGAAGGTTGCTGAAACAGGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLKQGRLLKQGS*LYQGRLLKQGS Trigger: GCTTCCCTGTTTCAGCAACCTTCCCTGGTACAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGCTTCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 72 bp | GTAAGCCCAAAGGGGAAAGGCATCATACTGGAAGATTaGTGGGAAGGGCTGAACAGAGAACTGGGCCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSPKGKGIILED*WEGLNRELGQC Trigger: GCACTGGCCCAGTTCTCTGTTCAGCCCTTCCCACAAATCTTCCAGTATGATGCCTTTCCCCTTTGGGCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094641.9 |
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| CDS CAA 90 bp | CTGTGGAAAGTAAGCCCAAAGGGGAAAGGCATCATACTGGAAGATTaGTGGGAAGGGCTGAACAGAGAACTGGGCCAGTGCCTGATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LWKVSPKGKGIILED*WEGLNRELGQCLIH Trigger: GTGGATCAGGCACTGGCCCAGTTCTCTGTTCAGCCCTTCCCACAAATCTTCCAGTATGATGCCTTTCCCCTTTGGGCTTACTTTCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094641.9 |
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| CDS CAA 90 bp | CATGGAAGGTTGCTGAAACAGGGAAGCTTGCTGAAGCAGGGAAGGTaGCTGAAACAGGGAAGCTTGCTGTACCAGGGAAGGTTGCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HGRLLKQGSLLKQGR*LKQGSLLYQGRLLK Trigger: TTTCAGCAACCTTCCCTGGTACAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGCTTCAGCAAGCTTCCCTGTTTCAGCAACCTTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS GCA 72 bp | TCTTGGATGATGTTTCTGTGCCAGGGAAGCTTGCTGTaGCAGGAAAGCTTGCTGTACCAGGGAAGATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWMMFLCQGSLL*QESLLYQGRLL Trigger: CAGCAATCTTCCCTGGTACAGCAAGCTTTCCTGGCACAGCAAGCTTCCCTGGCACAGAAACATCATCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS GCA 72 bp | ATAGTAGGACTGGCTCAGTCTTGGATGATGTTTCTGTaGCAGGGAAGCTTGCTGTGCCAGGAAAGCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IVGLAQSWMMFL*QGSLLCQESLL Trigger: CAGCAAGCTTTCCTGGCACAGCAAGCTTCCCTGGCACAGAAACATCATCCAAGACTGAGCCAGTCCTACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS GCA 72 bp | GATTTGTGGGAAGGGCTGAACAGAGAACTGGGCCAGTaGCTGATCCACTACACTCATAGGATGTCTCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: DLWEGLNRELGQ*LIHYTHRMSHL Trigger: CAAATGAGACATCCTATGAGTGTAGTGGATCAGGCACTGGCCCAGTTCTCTGTTCAGCCCTTCCCACAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094641.9 |
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| CDS CCA 72 bp | CTGTTCCATATGTGGATAGTAGGACTGGCTCAGTCTTaGATGATGTTTCTGTGCCAGGGAAGCTTGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LFHMWIVGLAQS*MMFLCQGSLLC Trigger: GCACAGCAAGCTTCCCTGGCACAGAAACATCATCCAAGACTGAGCCAGTCCTACTATCCACATATGGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 72 bp | TTGCTGTACCAGGGAAGGTTGCTGAAACAGGGAAGCTaGCTTAGCCAGGGAAGCTTTCTGGAGAAGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LLYQGRLLKQGS*LSQGSFLEKLV Trigger: AACCAACTTCTCCAGAAAGCTTCCCTGGCTAAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGGTACAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 72 bp | GCTGTTCCATATGTGGATAGTAGGACTGGCTCAGTCTaGGATGATGTTTCTGTGCCAGGGAAGCTTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AVPYVDSRTGSV*DDVSVPGKLAV Trigger: CACAGCAAGCTTCCCTGGCACAGAAACATCATCCAAGACTGAGCCAGTCCTACTATCCACATATGGAACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 90 bp | CTGAAACAGGGAAGCTTGCTTAGCCAGGGAAGCTTTCTGGAGAAGTaGGTTGTACTTAAACTGTCTCTGAAGCTGTTCCAGGGTGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LKQGSLLSQGSFLEK*VVLKLSLKLFQGAL Trigger: CAGTGCACCCTGGAACAGCTTCAGAGACAGTTTAAGTACAACCAACTTCTCCAGAAAGCTTCCCTGGCTAAGCAAGCTTCCCTGTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 |
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| CDS CAA 90 bp | CAGGGAAGCTTGCTGTACCAGGGAAGGTTGCTGAAACAGGGAAGCTaGCTTAGCCAGGGAAGCTTTCTGGAGAAGTTGGTTGTACTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: QGSLLYQGRLLKQGS*LSQGSFLEKLVVLK Trigger: TTTAAGTACAACCAACTTCTCCAGAAAGCTTCCCTGGCTAAGCAAGCTTCCCTGTTTCAGCAACCTTCCCTGGTACAGCAAGCTTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS TCA 72 bp | GATTCCTCACTTGATGAGCTGATTGAAGAGTCTTCCTaGGCACTTGCCATTGCTTGTTCCTCAGATGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DSSLDELIEESS*ALAIACSSDAA Trigger: TGCAGCATCTGAGGAACAAGCAATGGCAAGTGCTCAGGAAGACTCTTCAATCAGCTCATCAAGTGAGGAATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 ENSMUST00000199506.5 |
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| CDS TCA 72 bp | GCTTTCTGGAGAAGTTGGTTGTACTTAAACTGTCTCTaGAGCTGTTCCAGGGTGCACTGGTTGAGCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: AFWRSWLYLNCL*SCSRVHWLSMS Trigger: AGACATGCTCAACCAGTGCACCCTGGAACAGCTTCAGAGACAGTTTAAGTACAACCAACTTCTCCAGAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 |
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| CDS GCA 72 bp | AAGGTACTGCATATCCTGAACAGAGAACTGGGCCAGTaGCTGATCCACTACACTCATAGGATGTCTCATTTG | + |
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Preference number: 6 (lower is better) Translates to: KVLHILNRELGQ*LIHYTHRMSHL Trigger: CAAATGAGACATCCTATGAGTGTAGTGGATCAGGCACTGGCCCAGTTCTCTGTTCAGGATATGCAGTACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197631.5 |
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| CDS CAA 72 bp | GGAAGCTTGCTTAGCCAGGGAAGCTTTCTGGAGAAGTaGGTTGTACTTAAACTGTCTCTGAAGCTGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GSLLSQGSFLEK*VVLKLSLKLFQ Trigger: CTGGAACAGCTTCAGAGACAGTTTAAGTACAACCAACTTCTCCAGAAAGCTTCCCTGGCTAAGCAAGCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 |
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| CDS CAA 90 bp | GCACTTGCCATTGCTTGTTCCTCAGATGCTGCATCCATAGTTACCTaGATTTCATCGTTCTGTTCTGTCAGAAGTGCTCTCTGTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALAIACSSDAASIVT*ISSFCSVRSALCLF Trigger: GAACAGACAGAGAGCACTTCTGACAGAACAGAACGATGAAATCAAGGTAACTATGGATGCAGCATCTGAGGAACAAGCAATGGCAAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 ENSMUST00000199506.5 |
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| CDS GCA 72 bp | GTCTTCCTGAGCACTTGCCATTGCTTGTTCCTCAGATaGTGCATCCATAGTTACCTTGATTTCATCGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VFLSTCHCLFLR*CIHSYLDFIVL Trigger: CAGAACGATGAAATCAAGGTAACTATGGATGCAGCATCTGAGGAACAAGCAATGGCAAGTGCTCAGGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 ENSMUST00000199506.5 |
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| CDS GCA 72 bp | ACTGCTGCTATGCTGTTGCTGAGTTTGACTGCTAACTaGATTTCTACTATGAAGTCTGGGCATAGCAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TAAMLLLSLTAN*ISTMKSGHSKS Trigger: GCTTTTGCTATGCCCAGACTTCATAGTAGAAATGCAGTTAGCAGTCAAACTCAGCAACAGCATAGCAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS GCA 72 bp | TTCCTGAGCACTTGCCATTGCTTGTTCCTCAGATGCTaGATCCATAGTTACCTTGATTTCATCGTTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLSTCHCLFLRC*IHSYLDFIVLF Trigger: GAACAGAACGATGAAATCAAGGTAACTATGGATGCAGCATCTGAGGAACAAGCAATGGCAAGTGCTCAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 ENSMUST00000199506.5 |
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| CDS CAA 72 bp | CAGTGCCTGATCCACTACACTCATAGGATGTCTCATTaGAACTTGGCTGTATGCATTCATTCTGTAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QCLIHYTHRMSH*NLAVCIHSVRL Trigger: CAGCCTTACAGAATGAATGCATACAGCCAAGTTCAAATGAGACATCCTATGAGTGTAGTGGATCAGGCACTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 72 bp | ATTGCTTGTTCCTCAGATGCTGCATCCATAGTTACCTaGATTTCATCGTTCTGTTCTGTCAGAAGTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: IACSSDAASIVT*ISSFCSVRSAL Trigger: GAGAGCACTTCTGACAGAACAGAACGATGAAATCAAGGTAACTATGGATGCAGCATCTGAGGAACAAGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094641.9 ENSMUST00000197157.2 ENSMUST00000197631.5 ENSMUST00000199506.5 |
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| CDS CAA 72 bp | AAAAATTTCCTCACTGCTGCTATGCTGTTGCTGAGTTaGACTGCTAACTGCATTTCTACTATGAAGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KNFLTAAMLLLS*TANCISTMKSG Trigger: CCCAGACTTCATAGTAGAAATGCAGTTAGCAGTCAAACTCAGCAACAGCATAGCAGCAGTGAGGAAATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 90 bp | GAGATACTTTGGTTGTTTAAAAATTTCCTCACTGCTGCTATGCTGTaGCTGAGTTTGACTGCTAACTGCATTTCTACTATGAAGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EILWLFKNFLTAAML*LSLTANCISTMKSG Trigger: CCCAGACTTCATAGTAGAAATGCAGTTAGCAGTCAAACTCAGCAACAGCATAGCAGCAGTGAGGAAATTTTTAAACAACCAAAGTATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS GCA 72 bp | TACACTCATAGGATGTCTCATTTGAACTTGGCTGTATaGATTCATTCTGTAAGGCTGTTCCATATGTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: YTHRMSHLNLAV*IHSVRLFHMWI Trigger: TATCCACATATGGAACAGCCTTACAGAATGAATGCATACAGCCAAGTTCAAATGAGACATCCTATGAGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 72 bp | TGGTTGTTTAAAAATTTCCTCACTGCTGCTATGCTGTaGCTGAGTTTGACTGCTAACTGCATTTCTACTATG | + |
|
Preference number: 6 (lower is better) Translates to: WLFKNFLTAAML*LSLTANCISTM Trigger: CATAGTAGAAATGCAGTTAGCAGTCAAACTCAGCAACAGCATAGCAGCAGTGAGGAAATTTTTAAACAACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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| CDS CAA 90 bp | TATAAATATAGATTTAGTAAAAATTCTCACCTGAAACAGGGAAGCTaGCTTAGCCAGGGAAGCTTTCTGGAGAAGTTGGTTGTACTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: YKYRFSKNSHLKQGS*LSQGSFLEKLVVLK Trigger: TTTAAGTACAACCAACTTCTCCAGAAAGCTTCCCTGGCTAAGCAAGCTTCCCTGTTTCAGGTGAGAATTTTTACTAAATCTATATTTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197157.2 |
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| CDS TCA 72 bp | AGTGCTCTCTGTCTGTTCATGTTGTTGACGAATTCCTaGTTTAGGTTGAGATACTTTGGTTGTTTAAAAATT | + |
|
Preference number: 6 (lower is better) Translates to: SALCLFMLLTNS*FRLRYFGCLKI Trigger: AATTTTTAAACAACCAAAGTATCTCAACCTAAATCAGGAATTCGTCAACAACATGAACAGACAGAGAGCACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094641.9 ENSMUST00000197631.5 |
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