RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSMD2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028804

Ensembl transcript IDs: ENSMUST00000184063.3, ENSMUST00000221199.2

Found 891 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGAGGCCCAGCAGTGGCAGACGTAGGCGGAGGGACAGACGAAGATaGGCACTGGGCGCTGTGCTCAGGGGAGCTCCTTCCTGCCCCCTG +
Preference number: 1 (lower is better)
Translates to: PRPSSGRRRRRDRRR*ALGAVLRGAPSCPL
Trigger: CAGGGGGCAGGAAGGAGCTCCCCTGAGCACAGCGCCCAGTGCCCATCTTCGTCTGTCCCTCCGCCTACGTCTGCCACTGCTGGGCCTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 90 bp GGCCAGAGGGTGTGTGGGCAGGAGTGGGCCTGCCCTTGTGGTCTTTaGTGCTCCTGCTGGAAATGGAGACCCCCTCACTTCAGCCCGTCC +
Preference number: 1 (lower is better)
Translates to: GQRVCGQEWACPCGL*CSCWKWRPPHFSPS
Trigger: GGACGGGCTGAAGTGAGGGGGTCTCCATTTCCAGCAGGAGCATCAAAGACCACAAGGGCAGGCCCACTCCTGCCCACACACCCTCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 90 bp CCACCCGATGCAGGGATGCTAAGTCCCAGAGGGCCAGAGGGTGTGTaGGCAGGAGTGGGCCTGCCCTTGTGGTCTTTGATGCTCCTGCTG +
Preference number: 1 (lower is better)
Translates to: PPDAGMLSPRGPEGV*AGVGLPLWSLMLLL
Trigger: CAGCAGGAGCATCAAAGACCACAAGGGCAGGCCCACTCCTGCCCACACACCCTCTGGCCCTCTGGGACTTAGCATCCCTGCATCGGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 90 bp CCCAGAGGGCCAGAGGGTGTGTGGGCAGGAGTGGGCCTGCCCTTGTaGTCTTTGATGCTCCTGCTGGAAATGGAGACCCCCTCACTTCAG +
Preference number: 1 (lower is better)
Translates to: PRGPEGVWAGVGLPL*SLMLLLEMETPSLQ
Trigger: CTGAAGTGAGGGGGTCTCCATTTCCAGCAGGAGCATCAAAGACCACAAGGGCAGGCCCACTCCTGCCCACACACCCTCTGGCCCTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 90 bp CCCATCATTCACTCTGCTGTCTGCATCCATCTGCCTCCCTCCAGCTaGAGCCCTCTTCCTCTGCTGCCCAACGCAGGGCATCGTGGAGTC +
Preference number: 1 (lower is better)
Translates to: PIIHSAVCIHLPPSS*SPLPLLPNAGHRGV
Trigger: GACTCCACGATGCCCTGCGTTGGGCAGCAGAGGAAGAGGGCTGCAGCTGGAGGGAGGCAGATGGATGCAGACAGCAGAGTGAATGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 90 bp AGTCAGGCACGGAGAATAAGTCAGCAAGCGGTGGCTGCCACCTTTTaGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: SQARRISQQAVAATF*EPGLVCSCPLQGVL
Trigger: CAGCACACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCACCGCTTGCTGACTTATTCTCCGTGCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 90 bp GCGAGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTaGTGCCCAGGCACAGACGGCAGCATCCAGATTAGACACACACAT +
Preference number: 1 (lower is better)
Translates to: ASTNSGGWGTGCFIW*CPGTDGSIQIRHTH
Trigger: ATGTGTGTGTCTAATCTGGATGCTGCCGTCTGTGCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 90 bp AGAGAGAGGGTAACACACAGCAGATGCTGGGTGCCCACCAGCCTTTaGTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTGGG +
Preference number: 1 (lower is better)
Translates to: RERVTHSRCWVPTSL*SLSVSWDLPSTHSG
Trigger: CCCACTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGCACCCAGCATCTGCTGTGTGTTACCCTCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 90 bp AATGGGCATGAACAAGTTTGTCTAGACTGGTCCTCTCCCACCCGATaGAGGGATGCTAAGTCCCAGAGGGCCAGAGGGTGTGTGGGCAGG +
Preference number: 1 (lower is better)
Translates to: NGHEQVCLDWSSPTR*RDAKSQRARGCVGR
Trigger: CCTGCCCACACACCCTCTGGCCCTCTGGGACTTAGCATCCCTGCATCGGGTGGGAGAGGACCAGTCTAGACAAACTTGTTCATGCCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 90 bp CACCCGCCAGGAGCTGGAGAGAATGGGATTTTTGCTCCGTTCTCTTaGTTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTG +
Preference number: 1 (lower is better)
Translates to: HPPGAGENGIFAPFS*LRSCQVLCCGCGLL
Trigger: CAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAAGAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCCTGGCGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTaGCCAGGCACAGACGGCAGCATCCAGATTAGACACACACATCTT +
Preference number: 1 (lower is better)
Translates to: STNSGGWGTGCFIWC*PGTDGSIQIRHTHL
Trigger: AAGATGTGTGTGTCTAATCTGGATGCTGCCGTCTGTGCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 90 bp GAAAAAGTGCCCAAAGCCAGAGAGAGGGTAACACACAGCAGATGCTaGGTGCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTC +
Preference number: 1 (lower is better)
Translates to: EKVPKARERVTHSRC*VPTSLCSLSVSWDL
Trigger: GAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGCACCCAGCATCTGCTGTGTGTTACCCTCTCTCTGGCTTTGGGCACTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 90 bp TGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTACCTCCCATaGGATGTGACCTTCTTACTCATTCTTCATGTCCCTACACATGGG +
Preference number: 1 (lower is better)
Translates to: WGHPCSQVASACYLP*DVTFLLILHVPTHG
Trigger: CCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTCACATCTCATGGGAGGTAGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 90 bp GCCTCTGTGGTCTCTTCTGTAGGACACAGTGAAGGAGAGGCTGTGTaGGCTCAGGTGCACACCCATCATTCACTCTGCTGTCTGCATCCA +
Preference number: 1 (lower is better)
Translates to: ASVVSSVGHSEGEAV*AQVHTHHSLCCLHP
Trigger: TGGATGCAGACAGCAGAGTGAATGATGGGTGTGCACCTGAGCGCACACAGCCTCTCCTTCACTGTGTCCTACAGAAGAGACCACAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 90 bp ACACATAAAGAGTCAGGCACGGAGAATAAGTCAGCAAGCGGTGGCTaGCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCA +
Preference number: 1 (lower is better)
Translates to: THKESGTENKSASGG*HLLGARAGLLLSSP
Trigger: TGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCACCGCTTGCTGACTTATTCTCCGTGCCTGACTCTTTATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 90 bp GGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGTGCTGTCTaGTCTGTAGAGGTCTTTTTCTCTTCTTGTGGTCAGCTGACAGTC +
Preference number: 1 (lower is better)
Translates to: GARAGLLLSSPGCAV*SVEVFFSSCGQLTV
Trigger: GACTGTCAGCTGACCACAAGAAGAGAAAAAGACCTCTACAGACCAGACAGCACACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 90 bp CCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGTaGTGTCTGGTCTGTAGAGGTCTTTTTCTCTTCTTGTGGTCAGCT +
Preference number: 1 (lower is better)
Translates to: PFGSQGWFAPVLSRV*CLVCRGLFLFLWSA
Trigger: AGCTGACCACAAGAAGAGAAAAAGACCTCTACAGACCAGACAGCACACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 90 bp TTTTGCTCCGTTCTCTTGATTAAGGAGCTGCCAGGTCCTCTGCTGTaGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCACCAATTCAGGA +
Preference number: 1 (lower is better)
Translates to: FCSVLLIKELPGPLL*LRAVGSQEASTNSG
Trigger: TCCTGAATTGGTGCTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAAGAGAACGGAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 90 bp CGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGTAGGACACAGTaGAGGAGAGGCTGTGTGCGCTCAGGTGCACACCCATCATTCACT +
Preference number: 1 (lower is better)
Translates to: RFPFLSLCGLFCRTQ*RRGCVRSGAHPSFT
Trigger: AGTGAATGATGGGTGTGCACCTGAGCGCACACAGCCTCTCCTTCACTGTGTCCTACAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 90 bp GCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATaGCTTTACCCTTCGTTTCCAAAGATGCCCAGGACCCCAAATAAC +
Preference number: 1 (lower is better)
Translates to: ARLLSQIPAVSPTPP*LYPSFPKMPRTPNN
Trigger: GTTATTTGGGGTCCTGGGCATCTTTGGAAACGAAGGGTAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 90 bp AATGACTCTGAGACACCCGCCAGGAGCTGGAGAGAATGGGATTTTTaGTCCGTTCTCTTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGG +
Preference number: 1 (lower is better)
Translates to: NDSETPARSWREWDF*SVLLIKELPGPLLW
Trigger: CCACAGCAGAGGACCTGGCAGCTCCTTAATCAAGAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCCTGGCGGGTGTCTCAGAGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 90 bp TGTAGAGGTCTTTTTCTCTTCTTGTGGTCAGCTGACAGTCAGAGGTaGTGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCC +
Preference number: 1 (lower is better)
Translates to: CRGLFLFLWSADSQR*CQAPESDSCCIPHS
Trigger: GGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCATCACCTCTGACTGTCAGCTGACCACAAGAAGAGAAAAAGACCTCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 90 bp ACTGGCCTAAATGACTCTGAGACACCCGCCAGGAGCTGGAGAGAATaGGATTTTTGCTCCGTTCTCTTGATTAAGGAGCTGCCAGGTCCT +
Preference number: 1 (lower is better)
Translates to: TGLNDSETPARSWRE*DFCSVLLIKELPGP
Trigger: AGGACCTGGCAGCTCCTTAATCAAGAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCCTGGCGGGTGTCTCAGAGTCATTTAGGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 90 bp CCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTaGATGGAAACAGCGAGTCCTGCTTTGGTGGTGTTTGAAGAACTA +
Preference number: 1 (lower is better)
Translates to: PPAYFVAHASIFPDP*METASPALVVFEEL
Trigger: TAGTTCTTCAAACACCACCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 90 bp GGTGAAGGGCTTAATCTGCCTAGTTCTCTTCTGAGCCTCTGGGGATaGAGAAAAAGTGCCCAAAGCCAGAGAGAGGGTAACACACAGCAG +
Preference number: 1 (lower is better)
Translates to: GEGLNLPSSLLSLWG*RKSAQSQREGNTQQ
Trigger: CTGCTGTGTGTTACCCTCTCTCTGGCTTTGGGCACTTTTTCTTCATCCCCAGAGGCTCAGAAGAGAACTAGGCAGATTAAGCCCTTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 90 bp TTGAGAAACACTGGCCTAAATGACTCTGAGACACCCGCCAGGAGCTaGAGAGAATGGGATTTTTGCTCCGTTCTCTTGATTAAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: LRNTGLNDSETPARS*REWDFCSVLLIKEL
Trigger: CAGCTCCTTAATCAAGAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCCTGGCGGGTGTCTCAGAGTCATTTAGGCCAGTGTTTCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 90 bp CCCATGAGATGTGACCTTCTTACTCATTCTTCATGTCCCTACACATaGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATC +
Preference number: 1 (lower is better)
Translates to: PMRCDLLTHSSCPYT*GHIGLRGNDAFLII
Trigger: GATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTCACATCTCATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCTCCTTCCTGCCCCCTaGGGGGAGCGGCTGCTGGCG +
Preference number: 2 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQLLPAP*GERLLA
Trigger: CGCCAGCAGCCGCTCCCCCCAGGGGGCAGGAAGGAG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGGGCACTGGGCGCTGTaGTCAGGGGAGCTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGGHWAL*SGELLP
Trigger: AGGAAGGAGCTCCCCTGAGCACAGCGCCCAGTGCCC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 90 bp GGGCCAGAGGGTGTGTGGGCAGGAGTGGGCCTGCCCTTGTGGTCTTaGATGCTCCTGCTGGAAATGGAGACCCCCTCACTTCAGCCCGTC +
Preference number: 2 (lower is better)
Translates to: GPEGVWAGVGLPLWS*MLLLEMETPSLQPV
Trigger: GACGGGCTGAAGTGAGGGGGTCTCCATTTCCAGCAGGAGCATCAAAGACCACAAGGGCAGGCCCACTCCTGCCCACACACCCTCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGTGGCTGCCACCTTTTaGGAGCCAGGGCTGGTTTGC +
Preference number: 2 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEVAATF*EPGLVC
Trigger: GCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGAGTCCTCTCCAGGGTaGCGAGCACAGATGGAGGCA +
Preference number: 2 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGESSPG*RAQMEA
Trigger: TGCCTCCATCTGTGCTCGTCACCCTGGAGAGGACTC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCTCCTTCCTGCCCCCTaGGGGGAGCGGCTGCTGGCG +
Preference number: 2 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSLLPAP*GERLLA
Trigger: CGCCAGCAGCCGCTCCCCCCAGGGGGCAGGAAGGAG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGGACGAAGATGGGCACTaGGCGCTGTGCTCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQDEDGH*ALCSGE
Trigger: CTCCCCTGAGCACAGCGCCCAGTGCCCATCTTCGTC...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGAGCTGCCAGGTCCTCTaGTGTGGTTGCGGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQSCQVL*CGCGLL
Trigger: CAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCT...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 90 bp AAGTCAGCAAGCGGTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTaGCTCCTGTCCTCTCCAGGGTGTGCTGTCTGGTCTGTAGAGGTC +
Preference number: 2 (lower is better)
Translates to: KSASGGCHLLGARAG*LLSSPGCAVWSVEV
Trigger: GACCTCTACAGACCAGACAGCACACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCACCGCTTGCTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 90 bp GAGTCAGGCACGGAGAATAAGTCAGCAAGCGGTGGCTGCCACCTTTaGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: ESGTENKSASGGCHL*GARAGLLLSSPGCA
Trigger: AGCACACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCACCGCTTGCTGACTTATTCTCCGTGCCTGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGTGATGCCAGGCTCCTaGGTCAGATTCCTGCTGTAT +
Preference number: 2 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEVMPGS*VRFLLY
Trigger: ATACAGCAGGAATCTGACTCAGGAGCCTGGCATCAC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCACACATCTTCTTGTTaGGACTCCCCTCCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEHTSSC*DSPPFL
Trigger: CAGGAAGGGAGGGGAGTCTCAACAAGAAGATGTGTG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGGGCACTGGGCGCTGTaGTCAGGGGAGCTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWGHWAL*SGELLP
Trigger: AGGAAGGAGCTCCCCTGAGCACAGCGCCCAGTGCCC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCTGTGTGCGCTCAGGTaGACACCCATCATTCACTCT +
Preference number: 2 (lower is better)
Translates to: GAARSSAVVAGCWKPRGELCALR*TPIIHS
Trigger: AGAGTGAATGATGGGTGTGCACCTGAGCGCACACAG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCAGCCAGGTGGCTTCTaGATGCTACCTCCCATGAGA +
Preference number: 2 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGQPGGF*MLPPMR
Trigger: TCTCATGGGAGGTAGCATGCAGAAGCCACCTGGCTG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 90 bp CAGAGAGAGGGTAACACACAGCAGATGCTGGGTGCCCACCAGCCTTaGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTGG +
Preference number: 2 (lower is better)
Translates to: QREGNTQQMLGAHQP*LLECLLGPPKHTQW
Trigger: CCACTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGCACCCAGCATCTGCTGTGTGTTACCCTCTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTTCTGTAGGACACAGTaGAGGAGAGGCTGTGTGCGC +
Preference number: 2 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQFCRTQ*RRGCVR
Trigger: GCGCACACAGCCTCTCCTTCACTGTGTCCTACAGAA...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCACACATCTTCTTGTTaGGACTCCCCTCCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGHTSSC*DSPPFL
Trigger: CAGGAAGGGAGGGGAGTCTCAACAAGAAGATGTGTG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGCAGCCCTCTTCCTCTaGTGCCCAACGCAGGGCATC +
Preference number: 2 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWAALFL*CPTQGI
Trigger: GATGCCCTGCGTTGGGCAGCAGAGGAAGAGGGCTGC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCAGCCAGGTGGCTTCTaGATGCTACCTCCCATGAGA +
Preference number: 2 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQQPGGF*MLPPMR
Trigger: TCTCATGGGAGGTAGCATGCAGAAGCCACCTGGCTG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGACGAAGATGGGCACTaGGCGCTGTGCTCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQDEDGH*ALCSGE
Trigger: CTCCCCTGAGCACAGCGCCCAGTGCCCATCTTCGTC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 90 bp TGCTCCGTTCTCTTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTaGCGGGCTGTTGGAAGCCAAGAGGCGAGCACCAATTCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: CSVLLIKELPGPLLW*RAVGSQEASTNSGG
Trigger: GCCTCCTGAATTGGTGCTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAAGAGAACGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGAGTCCTCTCCAGGGTaGCGAGCACAGATGGAGGCA +
Preference number: 2 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWESSPG*RAQMEA
Trigger: TGCCTCCATCTGTGCTCGTCACCCTGGAGAGGACTC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGCAGCCCTCTTCCTCTaGTGCCCAACGCAGGGCATC +
Preference number: 2 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSAALFL*CPTQGI
Trigger: GATGCCCTGCGTTGGGCAGCAGAGGAAGAGGGCTGC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGGTGACGAGCACAGATaGAGGCAGGGCAGGCAAGGG +
Preference number: 2 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPGDEHR*RQGRQG
Trigger: CCCTTGCCTGCCCTGCCTCCATCTGTGCTCGTCACC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTCTCATCATCTCCTCTaGGTTTGTGGGGACAGTGTC +
Preference number: 2 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGSHHLL*VCGDSV
Trigger: GACACTGTCCCCACAAACCCAGAGGAGATGATGAGA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAAGGAGGCTGGGGCACTaGGTGCTTCATCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQRRLGH*VLHLVL
Trigger: CAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCT...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAAGGAGAGGCTGTGTaGGCTCAGGTGCACACCCAT +
Preference number: 2 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQEGEAV*AQVHTH
Trigger: ATGGGTGTGCACCTGAGCGCACACAGCCTCTCCTTC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTAGCTGCCAGGTCCTCTaGTGTGGTTGCGGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSSCQVL*CGCGLL
Trigger: CAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCTTTTTCTCTTCTTGTaGTCAGCTGACAGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: GAARSSAVVAGCWKPRGELFLFL*SADSQR
Trigger: CCTCTGACTGTCAGCTGACCACAAGAAGAGAAAAAG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 90 bp GCCCAGGCACAGACGGCAGCATCCAGATTAGACACACACATCTTCTaGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGA +
Preference number: 2 (lower is better)
Translates to: AQAQTAASRLDTHIF*LRLPSLPAFGAHCR
Trigger: TCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGATGTGTGTGTCTAATCTGGATGCTGCCGTCTGTGCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 90 bp ACACCCGCCAGGAGCTGGAGAGAATGGGATTTTTGCTCCGTTCTCTaGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTT +
Preference number: 2 (lower is better)
Translates to: TPARSWREWDFCSVL*IKELPGPLLWLRAV
Trigger: AACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAAGAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCCTGGCGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCTTCGTTTCCAAAGATaGCCAGGACCCCAAATAACT +
Preference number: 2 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGLRFQR*PGPQIT
Trigger: AGTTATTTGGGGTCCTGGGCATCTTTGGAAACGAAG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGTCCTCTCCAGGGTGTaGTGTCTGGTCTGTAGAGGT +
Preference number: 2 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQVLSRV*CLVCRG
Trigger: ACCTCTACAGACCAGACAGCACACCCTGGAGAGGAC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTTTCTGTAGGACACAGTaGAGGAGAGGCTGTGTGCGC +
Preference number: 2 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSFCRTQ*RRGCVR
Trigger: GCGCACACAGCCTCTCCTTCACTGTGTCCTACAGAA...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACTTCTTGTGGTCAGCTaGCAGTCAGAGGTGATGCCA +
Preference number: 2 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQLLVVS*QSEVMP
Trigger: TGGCATCACCTCTGACTGTCAGCTGACCACAAGAAG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCTTCCAGGTAATCCTTaGTATCGATGTGCAAATGGG +
Preference number: 2 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQLPGNP*YRCANG
Trigger: CCCATTTGCACATCGATAGCAAGGATTACCTGGAAG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTGGTTTGAGAGGCAATaGTGCTTTTCTCATCATCTC +
Preference number: 2 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQWFERQ*CFSHHL
Trigger: GAGATGATGAGAAAAGCATCATTGCCTCTCAAACCA...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGCATGCTACCTCCCATaGGATGTGACCTTCTTACTC +
Preference number: 2 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWACYLP*DVTFLL
Trigger: GAGTAAGAAGGTCACATCTCATGGGAGGTAGCATGC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCTTCTTGTGGTCAGCTaGCAGTCAGAGGTGATGCCA +
Preference number: 2 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPLLVVS*QSEVMP
Trigger: TGGCATCACCTCTGACTGTCAGCTGACCACAAGAAG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTTCTCCTCTGGGTTTGTaGGGACAGTGTCTAGGGCAT +
Preference number: 2 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPSPLGL*GQCLGH
Trigger: ATGCCCTAGACACTGTCCCCACAAACCCAGAGGAGA...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTACACCCGCCAGGAGCTaGAGAGAATGGGATTTTTGC +
Preference number: 2 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSTPARS*REWDFC
Trigger: GCAAAAATCCCATTCTCTCCAGCTCCTGGCGGGTGT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGGGGACACATTGGTTTaGGAGGCAATGATGCTTTTC +
Preference number: 2 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWGDTLV*EAMMLF
Trigger: GAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR TCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGGGGACACATTGGTTTaGGAGGCAATGATGCTTTTC +
Preference number: 2 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSGDTLV*EAMMLF
Trigger: GAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTAGGAGCTGGAGAGAATaGGATTTTTGCTCCGTTCTC +
Preference number: 2 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSRSWRE*DFCSVL
Trigger: GAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCCT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR GCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAGAAGGAGAGGCTGTGTaGGCTCAGGTGCACACCCAT +
Preference number: 2 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLREGEAV*AQVHTH
Trigger: ATGGGTGTGCACCTGAGCGCACACAGCCTCTCCTTC...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 90 bp TGTGAACTGCATGGCTCTCCCCGTCCATCCCCACACACATTCTATTaGTTATTTCAATATGTCCTACAAGCGTCGGAGACTGCGGTTCAC +
Preference number: 2 (lower is better)
Translates to: CELHGSPRPSPHTFY*LFQYVLQASETAVH
Trigger: GTGAACCGCAGTCTCCGACGCTTGTAGGACATATTGAAATAACAAATAGAATGTGTGTGGGGATGGACGGGGAGAGCCATGCAGTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGATCTCCTCTGGGTTTGTaGGGACAGTGTCTAGGGCAT +
Preference number: 2 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRSPLGL*GQCLGH
Trigger: ATGCCCTAGACACTGTCCCCACAAACCCAGAGGAGA...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp AGCAGTGGCAGACGTAGGCGGAGGGACAGACGAAGATaGGCACTGGGCGCTGTGCTCAGGGGAGCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: SSGRRRRRDRRR*ALGAVLRGAPS
Trigger: GGAAGGAGCTCCCCTGAGCACAGCGCCCAGTGCCCATCTTCGTCTGTCCCTCCGCCTACGTCTGCCACTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp CAGCCCTCTTCCTCTGCTGCCCAACGCAGGGCATCGTaGAGTCCTCTCCAGGGTGACGAGCACAGATGGAGG +
Preference number: 3 (lower is better)
Translates to: QPSSSAAQRRAS*SPLQGDEHRWR
Trigger: CCTCCATCTGTGCTCGTCACCCTGGAGAGGACTCCACGATGCCCTGCGTTGGGCAGCAGAGGAAGAGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCCTCCCTTCCTGCCTTaGGTGCCCACTGTAGACCTG +
Preference number: 3 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGPPFLP*VPTVDL
Trigger: CAGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp GTTGGAAGCCAAGAGGCGAGCACCAATTCAGGAGGCTaGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: VGSQEASTNSGG*GTGCFIWCCPG
Trigger: GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCTCGCCTCTTGGCTTCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTaGAAGCCAAGAGGCGAGCACCAATTCAGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GAARSSAVVAGC*KPRGEHQFRRL
Trigger: CAGCCTCCTGAATTGGTGCTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp CCAGAGGGTGTGTGGGCAGGAGTGGGCCTGCCCTTGTaGTCTTTGATGCTCCTGCTGGAAATGGAGACCCCC +
Preference number: 3 (lower is better)
Translates to: PEGVWAGVGLPL*SLMLLLEMETP
Trigger: GGGGGTCTCCATTTCCAGCAGGAGCATCAAAGACCACAAGGGCAGGCCCACTCCTGCCCACACACCCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 72 bp TCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTaGCCAGGCACAGACGGCAGCATCCAGATTAGACAC +
Preference number: 3 (lower is better)
Translates to: SGGWGTGCFIWC*PGTDGSIQIRH
Trigger: GTGTCTAATCTGGATGCTGCCGTCTGTGCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTCATCTCCTCTGGGTTaGTGGGGACAGTGTCTAGGG +
Preference number: 3 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGSSPLG*WGQCLG
Trigger: CCCTAGACACTGTCCCCACAAACCCAGAGGAGATGA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CAA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGGAGCCAGGGCTGGTTaGCTCCTGTCCTCTCCAGGG +
Preference number: 3 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWGARAG*LLSSPG
Trigger: CCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 72 bp ACAGCAGATGCTGGGTGCCCACCAGCCTTTGCTCCTTaGGTGTCTCCTGGGACCTCCCAAGCACACACAGTG +
Preference number: 3 (lower is better)
Translates to: TADAGCPPAFAP*VSPGTSQAHTV
Trigger: CACTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGCACCCAGCATCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 72 bp GCTGTGTGCGCTCAGGTGCACACCCATCATTCACTCTaGTGTCTGCATCCATCTGCCTCCCTCCAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: AVCAQVHTHHSL*CLHPSASLQLQ
Trigger: CTGCAGCTGGAGGGAGGCAGATGGATGCAGACAGCAGAGTGAATGATGGGTGTGCACCTGAGCGCACACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 72 bp GAGTCAGGCACGGAGAATAAGTCAGCAAGCGGTGGCTaGCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTG +
Preference number: 3 (lower is better)
Translates to: ESGTENKSASGG*HLLGARAGLLL
Trigger: CAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCACCGCTTGCTGACTTATTCTCCGTGCCTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp CGGAGAATAAGTCAGCAAGCGGTGGCTGCCACCTTTTaGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: RRISQQAVAATF*EPGLVCSCPLQ
Trigger: CTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCACCGCTTGCTGACTTATTCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp ACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTaGTGCTGCCCAGGCACAGACGGCAGCATCCAGATT +
Preference number: 3 (lower is better)
Translates to: TNSGGWGTGCFI*CCPGTDGSIQI
Trigger: AATCTGGATGCTGCCGTCTGTGCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 72 bp AATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTaGTGCCCAGGCACAGACGGCAGCATCCAGATTAGA +
Preference number: 3 (lower is better)
Translates to: NSGGWGTGCFIW*CPGTDGSIQIR
Trigger: TCTAATCTGGATGCTGCCGTCTGTGCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp CCCAAAGCCAGAGAGAGGGTAACACACAGCAGATGCTaGGTGCCCACCAGCCTTTGCTCCTTGAGTGTCTCC +
Preference number: 3 (lower is better)
Translates to: PKARERVTHSRC*VPTSLCSLSVS
Trigger: GGAGACACTCAAGGAGCAAAGGCTGGTGGGCACCCAGCATCTGCTGTGTGTTACCCTCTCTCTGGCTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CAA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGGAGTGGGCCTGCCCTaGTGGTCTTTGATGCTCCTG +
Preference number: 3 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSGVGLP*WSLMLL
Trigger: CAGGAGCATCAAAGACCACAAGGGCAGGCCCACTCC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 72 bp GTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTaGATGCTACCTCCCATGAGATGTGACCTTCTTACT +
Preference number: 3 (lower is better)
Translates to: VQMGPPLQPGGF*MLPPMRCDLLT
Trigger: AGTAAGAAGGTCACATCTCATGGGAGGTAGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTGGGGACACATTGGTTaGAGAGGCAATGATGCTTTT +
Preference number: 3 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGWGHIG*RGNDAF
Trigger: AAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 72 bp TTCTTAAGCCTCTGTGGTCTCTTCTGTAGGACACAGTaGAGGAGAGGCTGTGTGCGCTCAGGTGCACACCCA +
Preference number: 3 (lower is better)
Translates to: FLSLCGLFCRTQ*RRGCVRSGAHP
Trigger: TGGGTGTGCACCTGAGCGCACACAGCCTCTCCTTCACTGTGTCCTACAGAAGAGACCACAGAGGCTTAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 72 bp AGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGTaGTGTCTGGTCTGTAGAGGTCTTTTTCTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: SQGWFAPVLSRV*CLVCRGLFLFL
Trigger: CAAGAAGAGAAAAAGACCTCTACAGACCAGACAGCACACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR GCA 72 bp GAGACACCCGCCAGGAGCTGGAGAGAATGGGATTTTTaGTCCGTTCTCTTGATTAAGGAGCTGCCAGGTCCT +
Preference number: 3 (lower is better)
Translates to: ETPARSWREWDF*SVLLIKELPGP
Trigger: AGGACCTGGCAGCTCCTTAATCAAGAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCCTGGCGGGTGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CAA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGACACACACATCTTCTaGTTGAGACTCCCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQDTHIF*LRLPSL
Trigger: AAGGGAGGGGAGTCTCAACAAGAAGATGTGTGTGTC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 72 bp CTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATaGCTTTACCCTTCGTTTCCAAAGATGCCCAGGACC +
Preference number: 3 (lower is better)
Translates to: LSQIPAVSPTPP*LYPSFPKMPRT
Trigger: GGTCCTGGGCATCTTTGGAAACGAAGGGTAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 72 bp GGAGCTGGAGAGAATGGGATTTTTGCTCCGTTCTCTTaGTTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGC +
Preference number: 3 (lower is better)
Translates to: GAGENGIFAPFS*LRSCQVLCCGC
Trigger: GCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAAGAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp GATTCGCGTTTACACCTACACCTCCTGCGTATTTTGTaGCTCATGCGTCCATCTTCCCTGACCCCTGAATGG +
Preference number: 3 (lower is better)
Translates to: DSRLHLHLLRIL*LMRPSSLTPEW
Trigger: CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTGTAGGTGTAAACGCGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR-3UTR CAA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAACAGCGAGTCCTGCTTaGGTGGTGTTTGAAGAACTA +
Preference number: 3 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQTASPA*VVFEEL
Trigger: TAGTTCTTCAAACACCACCAAAGCAGGACTCGCTGT...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 72 bp GCCAGGTGGCTTCTGCATGCTACCTCCCATGAGATGTaGCCTTCTTACTCATTCTTCATGTCCCTACACATG +
Preference number: 3 (lower is better)
Translates to: ARWLLHATSHEM*PSYSFFMSLHM
Trigger: CATGTGTAGGGACATGAAGAATGAGTAAGAAGGTCACATCTCATGGGAGGTAGCATGCAGAAGCCACCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 72 bp CTTTTTCTCTTCTTGTGGTCAGCTGACAGTCAGAGGTaGTGCCAGGCTCCTGAGTCAGATTCCTGCTGTATC +
Preference number: 3 (lower is better)
Translates to: LFLFLWSADSQR*CQAPESDSCCI
Trigger: GATACAGCAGGAATCTGACTCAGGAGCCTGGCATCACCTCTGACTGTCAGCTGACCACAAGAAGAGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 72 bp TATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTaGATGGAAACAGCGAGTCCTGCTTTGGTGGTGTTT +
Preference number: 3 (lower is better)
Translates to: YFVAHASIFPDP*METASPALVVF
Trigger: AAACACCACCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp ACTGGCCTAAATGACTCTGAGACACCCGCCAGGAGCTaGAGAGAATGGGATTTTTGCTCCGTTCTCTTGATT +
Preference number: 3 (lower is better)
Translates to: TGLNDSETPARS*REWDFCSVLLI
Trigger: AATCAAGAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCCTGGCGGGTGTCTCAGAGTCATTTAGGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp GCAATGATGCTTTTCTCATCATCTCCTCTGGGTTTGTaGGGACAGTGTCTAGGGCATCTTTCACACACACAC +
Preference number: 3 (lower is better)
Translates to: AMMLFSSSPLGL*GQCLGHLSHTH
Trigger: GTGTGTGTGTGAAAGATGCCCTAGACACTGTCCCCACAAACCCAGAGGAGATGATGAGAAAAGCATCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR TCA 72 bp TGTAAATATCTGATATGCAGGATGGTCTTAGGCCTGTaGAAGGGACACTTGACCCACAAAGGGGTCGTGATC +
Preference number: 3 (lower is better)
Translates to: CKYLICRMVLGL*KGHLTHKGVVI
Trigger: GATCACGACCCCTTTGTGGGTCAAGTGTCCCTTTCACAGGCCTAAGACCATCCTGCATATCAGATATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CCA 72 bp TGTGACCTTCTTACTCATTCTTCATGTCCCTACACATaGGGACACATTGGTTTGAGAGGCAATGATGCTTTT +
Preference number: 3 (lower is better)
Translates to: CDLLTHSSCPYT*GHIGLRGNDAF
Trigger: AAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGGCAGACGGGCGGTTTaGCTGTCCAGCTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGGRRAV*LSSCRR
Trigger: CCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCC...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGCTTTGCAGGTACGGTaGTCGGAGCCACCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGALQVR*SEPPRR
Trigger: CCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGCTTTGCAGGTACGGTaGTCGGAGCCACCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGALQVR*SEPPRR
Trigger: CCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGC...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGAGCTGCCGTCGGCTTTaGAGGTACGGTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGESCRRL*RYGARS
Trigger: GCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCT...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGAGCCTTCGGTCCCCGTaGCCTCCAGGAAGTCATAGC +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGESLRSP*PPGSHS
Trigger: GCTATGACTTCCTGGAGGTCACGGGGACCGAAGGCT...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCATAGAGCCCGGCACTaGTGGGGGCTGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAHRARH*WGLAAS
Trigger: CGAGGCTGCCAGCCCCCATCAGTGCCGGGCTCTATG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGAGCGACTCTCCTGTGTaGGAGCCTGAGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGESDSPV*EPEREL
Trigger: CAGCTCCCTCTCAGGCTCTCACACAGGAGAGTCGCT...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGGTGCACCCGGCGTCTaGCTCGATGGTCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGGAPGV*LDGPDA
Trigger: TGCATCTGGACCATCGAGGCAGACGCCGGGTGCACC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTGCAGCTGGGCTGTGTaGCACTCCACGTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGCSWAV*HSTSRL
Trigger: CAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGATGGGGTATCCAGGCTaGGCTTCGATCACCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEMGYPG*ASITQA
Trigger: CGCCTGGGTGATCGAAGCCCAGCCTGGATACCCCAT...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCAGAGCTGCACTGTGTaGCGCTGGTTCGGGGTACCG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGQSCTV*RWFGVP
Trigger: CGGTACCCCGAACCAGCGCCACACAGTGCAGCTCTG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCACCTCCCGTTGGCCTaGCAGCGGATGACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGHLPLA*QRMTLW
Trigger: CCAAAGGGTCATCCGCTGCCAGGCCAACGGGAGGTG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGCAGGCAGGGAGAGCTaGTATCCCTCCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGAGRES*YPSRQA
Trigger: TGCCTGCCTGGAGGGATACCAGCTCTCCCTGCCTGC...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACGGCAGCCGAGGCACTaGGCAGCCCCCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLRQPRH*AAPSPA
Trigger: TGCTGGGCTGGGGGCTGCTCAGTGCCTCGGCTGCCG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGCGGCTGGGGAGCTGTaGGCCATAGAAGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEAAGEL*AIEASY
Trigger: ATAGGAAGCTTCTATGGCTCACAGCTCCCCAGCCGC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCACACCAGGCCATCGCTaGACACCACTCGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGTPGHR*TPLGHC
Trigger: GCAATGCCCGAGTGGTGTTCAGCGATGGCCTGGTGT...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGGTGGGCGGGCTGGGCTaGCAGAAGAATCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQVGGLG*QKNRFW
Trigger: CCAGAACCGATTCTTCTGGCAGCCCAGCCCGCCCAC...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGGCGGAAGCCAGCCCTaGACTGGTACACCACGCTGC +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAGGSQP*TGTPRC
Trigger: GCAGCGTGGTGTACCAGTGCAGGGCTGGCTTCCGCC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGCCGTAAGGGAACCCTaGGCTCTCCACTGTGCCATT +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEAVREP*ALHCAI
Trigger: AATGGCACAGTGGAGAGCCCAGGGTTCCCTTACGGC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGCTGATGACAGGGGCTaGGAGGCTGGCTCCGGTAAA +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGADDRG*EAGSGK
Trigger: TTTACCGGAGCCAGCCTCCCAGCCCCTGTCATCAGC...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGATAGGATGGTCCCGCTaGGCGAAGTCAGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEIGWSR*AKSGDH
Trigger: GTGGTCACCTGACTTCGCCCAGCGGGACCATCCTAT...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGAGCCTGGAGATAGGATaGTCCCGCTGGGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGESLEIG*SRWAKS
Trigger: TGACTTCGCCCAGCGGGACCATCCTATCTCCAGGCT...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCTCCGCAACACACCTTaGCAGAGGCGAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGLRNTP*QRRAPQ
Trigger: CTGTGGAGCTCGCCTCTGCCAAGGTGTGTTGCGGAG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCCAGGGCCCCGACATTaGCGTGTGTGGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAPGPRH*RVWASL
Trigger: CAGAGACGCCCACACACGCCAATGTCGGGGCCCTGG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTTGTGTAACCCATGGATaGCAGGTCCAGGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGCVTHG*QVQGPD
Trigger: GTCGGGGCCCTGGACCTGCCATCCATGGGTTACACA...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGAACTGCCCAAAGCCTTaGCCCTTGACGGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGENCPKP*PLTEPW
Trigger: CCAAGGCTCCGTCAAGGGCCAAGGCTTTGGGCAGTT...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 72 bp GGGCCAGAGGGTGTGTGGGCAGGAGTGGGCCTGCCCTaGTGGTCTTTGATGCTCCTGCTGGAAATGGAGACC +
Preference number: 4 (lower is better)
Translates to: GPEGVWAGVGLP*WSLMLLLEMET
Trigger: GGTCTCCATTTCCAGCAGGAGCATCAAAGACCACAAGGGCAGGCCCACTCCTGCCCACACACCCTCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCCGGTGGTTACCATCTaGTGTGAAGTGGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGPVVTI*CEVEPQ
Trigger: CTGCGGCTCCACTTCACATCAGATGGTAACCACCGG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCTGGGCGAAGTCAGGTaGCCACCACAAGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGLGEVR*PPQGAS
Trigger: TGAAGCTCCTTGTGGTGGTCACCTGACTTCGCCCAG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACGGTGGTGCCGAAGCTaGATCTGTGGGGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQRWCRS*ICGARW
Trigger: CCAGCGGGCCCCACAGATTCAGCTTCGGCACCACCG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCCAGACATTTGGGCATaGGGTGGAGAGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGPDIWA*GGEPGW
Trigger: CCATCCTGGCTCTCCACCTCATGCCCAAATGTCTGG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGATGGACTCGGGATCTaGCTCCAACAGCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGDGLGI*LQQPEV
Trigger: GACCTCAGGCTGTTGGAGTCAGATCCCGAGTCCATC...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCCGCCTCGTTGCTCATaGTGTCTGTGGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGPPRCS*CLWAGC
Trigger: ACATCCAGCCCACAGACATCATGAGCAACGAGGCGG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCTCGAGCCGGTCAGTTaGCTCAGGGGCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHALEPVS*LRGWEK
Trigger: CTTCTCCCAGCCCCTGAGGCAACTGACCGGCTCGAG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGGAAGAGGCTGTTGCTaGTGCTTTCAATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEGRGCC*CFQCGW
Trigger: CCAGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTCACAGATGCGTCGCTaGGGAAGGCGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQSQMRR*GRRGRG
Trigger: GCCTCTTCCTCGCCTTCCGCAGCGACGCATCTGTGA...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTGGTCCACGTGCAGTTaGCGTAGTTCGGGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGWSTCS*RSSGSR
Trigger: ACGGCTACCCGAACTACGCCAACTGCACGTGGACCA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGACTGGAACACGAGCTaGATCCTGTGCTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGDWNTS*ILCWSS
Trigger: GGAGGACCAGCACAGGATCCAGCTCGTGTTCCAGTC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTCTAGACGGGCCACATaGCCACTGCTGGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGSRRAT*PLLVME
Trigger: CTCCATCACCAGCAGTGGCCATGTGGCCCGTCTAGA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCTTGTAGCCGAACTGTaGGGTCCCTGGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGLVAEL*GPWVLT
Trigger: TGTGAGGACCCAGGGACCCCACAGTTCGGCTACAAG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTGCAGAGACATTCCACTaGGCCAGTGCCCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGAETFH*ASAPGT
Trigger: TGTACCTGGGGCACTGGCCCAGTGGAATGTCTCTGC...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCAGGAGATGTGGGCATaGCCCTGGAGGGCATATCCT +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGQEMWA*PWRAYP
Trigger: AGGATATGCCCTCCAGGGCCATGCCCACATCTCCTG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCCAGACACTCTGCGGTaGCCTCGGCACCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWPDTLR*PRHPPG
Trigger: TCCAGGCGGGTGCCGAGGCCACCGCAGAGTGTCTGG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTGCACTCCCGCACCCTaGAGCCCACCAGTGTATATC +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGCTPAP*SPPVYI
Trigger: GATATACACTGGTGGGCTCCAGGGTGCGGGAGTGCA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCCACTGAGCTGCTGTTaGAAGCAAAGTGCCGGCCGA +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGPLSCC*KQSAGR
Trigger: TCGGCCGGCACTTTGCTTCCAACAGCAGCTCAGTGG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 72 bp AGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTaGGAAGCCAAGAGGCGAGCACCAATTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSCQVLCCGCGL*EAKRRAPIQEA
Trigger: AGCCTCCTGAATTGGTGCTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGCTGGTCCTCCGCGGTaGTGGTCCACGTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQAGPPR*WSTCSW
Trigger: CCAACTGCACGTGGACCATCACCGCGGAGGACCAGC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAAGCTGGCATGGCAGGTaGGCACCGCGTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLSWHGR*APRGPP
Trigger: TGGAGGGCCACGCGGTGCTCACCTGCCATGCCAGCT...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTAGTGGGGACTGGAGATaGTTCCACTCTGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHASGDWR*FHSGPA
Trigger: TGCGGGGCCAGAGTGGAATCATCTCCAGTCCCCACT...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCTTTTGGCACGTGATTaGTTTCTGCCCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGELLARD*FLPHQL
Trigger: GAGCTGGTGGGGCAGAAATCAATCACGTGCCAAAAG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGGTCAGGGAACCCTGGTaGCAAGATGGTGCCACTGGA +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQVREPW*QDGATG
Trigger: TCCAGTGGCACCATCTTGTCACCAGGGTTCCCTGAC...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGGATCTTCACGCAGCTaGTCTCTGCGCTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAGSSRS*SLRSPA
Trigger: TGCAGGGGAGCGCAGAGATCAGCTGCGTGAAGATCC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTAGCCTGAGAGGGAGCTaGGGAGCCGGGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPSLRGS*GAGSAG
Trigger: GCCAGCACTCCCGGCTCCTCAGCTCCCTCTCAGGCT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTCTCCACAGGCCCCGTaGCCTGGTAGACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQSPQAP*PGRLEA
Trigger: TGCTTCAAGTCTACCAGGTCACGGGGCCTGTGGAGA...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGATGGCGGCGGCCACTaGGCTGCTGTTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHADGGGH*AAVGSK
Trigger: TTTGCTTCCAACAGCAGCTCAGTGGCCGCCGCCATC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCAGAGGCTGTTGCTGCTaGTTTCAATGCGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGRGCCC*FQCGWG
Trigger: TCCCCAGCCGCATTGAAAGCAGCAGCAACAGCCTCT...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTACTGCTCCCCCACATTaGGCAATGCAGAGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHATAPPH*AMQSGG
Trigger: CCCTCCGCTCTGCATTGCGCAATGTGGGGGAGCAGT...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCAGCTCCCCTCACGATaGCATTGGCAAAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGQLPSR*HWQKAL
Trigger: CAGAGCCTTTTGCCAATGGCATCGTGAGGGGAGCTG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGTGAAGACCCCAAGCTaGAGAGATGTCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGVKTPS*RDVCCG
Trigger: GCCACAGCAGACATCTCTGCAGCTTGGGGTCTTCAC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGGCAGACGGGCGGTTTaGCTGTCCAGCTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPGRRAV*LSSCRR
Trigger: CCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCAGGTGAGCACCGCGTaGCCCTCCAGGAAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWQVSTA*PSRKKP
Trigger: CGGCTTCTTCCTGGAGGGCCACGCGGTGCTCACCTG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGAGGCACTCGATCTCTaGGGACCCCTGCAGGGCATA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAEALDL*GPLQGI
Trigger: TATGCCCTGCAGGGGTCCCCAGAGATCGAGTGCCTC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGGGCCGGTTCTGGGAATaGTCGCTGTGGAAGTACACG +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQGRFWE*SLWKYT
Trigger: CGTGTACTTCCACAGCGACCATTCCCAGAACCGGCC...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTAATCCTGGCCGGTTCTaGGAATGGTCGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGNPGRF*EWSLWK
Trigger: CTTCCACAGCGACCATTCCCAGAACCGGCCAGGATT...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCACCTGGGTAGGGGGTaGTCCCAGTTCCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAHLGRG*SQFRLV
Trigger: CACCAATCGGAACTGGGACCACCCCCTACCCAGGTG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCTGTCAGAAGCTCATTaGTCGGGCAGTGCACTTCGC +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGLSEAH*SGSALR
Trigger: GCGAAGTGCACTGCCCGACCAATGAGCTTCTGACAG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACCACTGGCCAGGCACTaGGACCTCGCAGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLPLARH*DLAAPS
Trigger: TGAGGGGGCTGCGAGGTCCCAGTGCCTGGCCAGTGG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGCGCTCCACTGCCCACTaGCCAGGCACTGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLRSTAH*PGTGTS
Trigger: CGAGGTCCCAGTGCCTGGCCAGTGGGCAGTGGAGCG...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCACTCCAGGTCAGGTTaGGAAGGCAGGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAHSRSG*EGRSWW
Trigger: CCACCAGGACCTGCCTTCCCAACCTGACCTGGAGTG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACCAGGGCCCCGACATTaGCGTGTGTGGGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQPGPRH*RVWASL
Trigger: CAGAGACGCCCACACACGCCAATGTCGGGGCCCTGG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGAACTGCCCAAAGCCTTaGCCCTTGACGGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQNCPKP*PLTEPW
Trigger: CCAAGGCTCCGTCAAGGGCCAAGGCTTTGGGCAGTT...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 72 bp CACAGCAGATGCTGGGTGCCCACCAGCCTTTGCTCCTaGAGTGTCTCCTGGGACCTCCCAAGCACACACAGT +
Preference number: 4 (lower is better)
Translates to: HSRCWVPTSLCS*SVSWDLPSTHS
Trigger: ACTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGCACCCAGCATCTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 72 bp GGTAACACACAGCAGATGCTGGGTGCCCACCAGCCTTaGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: GNTQQMLGAHQP*LLECLLGPPKH
Trigger: GTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGCACCCAGCATCTGCTGTGTGTTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGGTGCCATTGGGACCCTaGAGGTGGAATGTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQVPLGP*RWNVQF
Trigger: GAACTGCACATTCCACCTTCAGGGTCCCAATGGCAC...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCAGTCAGCATTGTTGTaGTACTCGGCAGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEQSALL*YSAGKW
Trigger: CCACTTTCCTGCCGAGTATCACAACAATGCTGACTG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTATGCCCCTGCGCTCAGTaGGGTTGCCACCACACGGCA +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLCPCAQ*GCHHTA
Trigger: TGCCGTGTGGTGGCAACCTCACTGAGCGCAGGGGCA...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGCAGCTCACTCCCGCTaGACCTTCCCATCATGCGGC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQAAHSR*TFPSCG
Trigger: GCCGCATGATGGGAAGGTTCAGCGGGAGTGAGCTGC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCCACAGGAAAGAGCTTaGCAGAGAGGAATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGPQERA*QRGMAS
Trigger: TGAGGCCATTCCTCTCTGTCAAGCTCTTTCCTGTGG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTTCCTGTGCTGGTTCCTaGGCAGTGGGGGAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSSCAGS*AVGEGA
Trigger: GGCTCCCTCCCCCACTGCTCAGGAACCAGCACAGGA...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGGAGAAGGACACAGATaGCCTGTAGGAGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGGEGHR*PVGETS
Trigger: CGAGGTTTCTCCTACAGGTCATCTGTGTCCTTCTCC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCGATCATGGTGGCGTTaGCCTTGCTGTTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQRSWWR*PCCWLP
Trigger: AGGTAGCCAACAGCAAGGTCAACGCCACCATGATCG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCTGGGCTCTCCACTGTaGCATTGGGACCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHALGSPL*HWDPEG
Trigger: ACCTTCAGGGTCCCAATGGCACAGTGGAGAGCCCAG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGTTCTGGTCCCCATCCTaGCCACCGTCCCCGACTGTC +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWFWSPS*PPSPTV
Trigger: GACAGTCGGGGACGGTGGGCAGGATGGGGACCAGAA...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCCAGGGAGCTGCCACTaGTGTCACTCTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAPGSCH*CHSGRG
Trigger: TCCTCTTCCAGAGTGACAGCAGTGGCAGCTCCCTGG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTTGCTGCTGCTTTCAATaGGGCTGGGGAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHACCCFQ*GWGAVS
Trigger: GCTCACAGCTCCCCAGCCGCATTGAAAGCAGCAGCA...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTAACGGTAGCCTGTGTTaGATCCGAAGTGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGNGSLC*IRSGWS
Trigger: GCTCCATCCACTTCGGATGCAACACAGGCTACCGTT...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTTCAGCGTGGGATCTATaGAGCTGGGCTGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHASAWDL*SWAVCH
Trigger: GTGGCACACAGCCCAGCTGCATAGATCCCACGCTGA...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCTGTTGGAAGCAAAGTaGCGGCCGATGGACTCGGGA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHALLEAK*RPMDSG
Trigger: TCCCGAGTCCATCGGCCGGCACTTTGCTTCCAACAG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCGAAGGTTCTCTGCCTaGGGTGGGCCATCAAACACT +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQRRFSA*GGPSNT
Trigger: AGTGTTTGATGGCCCACCCCAGGCAGAGAACCTTCG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGTTCTCGGAGCTGGCATaGCAGGTGAGCACCGCGTGG +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWFSELA*QVSTAW
Trigger: CCACGCGGTGCTCACCTGCCATGCCAGCTCCGAGAA...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGTACTCGGCAGGAAAGTaGGGACTGGAGATGATTCCA +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEYSAGK*GLEMIP
Trigger: TGGAATCATCTCCAGTCCCCACTTTCCTGCCGAGTA...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGGTTATTGTCCTTGCTaGGCATCAGCTTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGGYCPC*ASASRL
Trigger: GAGGCGTGAAGCTGATGCCCAGCAAGGACAATAACC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCACTCCACTGGAAATTTaGCTCACACTCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGTPLEI*LTLQGL
Trigger: GAGCCCCTGGAGTGTGAGCCAAATTTCCAGTGGAGT...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCCGGCTGGGTCTGGATaGAGTAGATACACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQPAGSG*SRYTRG
Trigger: ACCACGAGTGTATCTACTCCATCCAGACCCAGCCGG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGAAGGAGCGATGCACGTaGGCGGGCTGGGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLKERCT*AGWAAR
Trigger: TCTGGCAGCCCAGCCCGCCCACGTGCATCGCTCCTT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGGCCATAGCGAGGTTCTaGCACAGAGCTGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQAIARF*HRAALC
Trigger: ACACAGTGCAGCTCTGTGCCAGAACCTCGCTATGGC...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGGCATGCAGGAGATGTaGGCATGGCCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWGMQEM*AWPWRA
Trigger: TGCCCTCCAGGGCCATGCCCACATCTCCTGCATGCC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGTGGCCGTGTCCCGGTaGAACTTGAGCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWVAVSR*NLSRTW
Trigger: CCAGGTCCTGCTCAAGTTCCACCGGGACACGGCCAC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGCCTAGGCGGATGCCATaGGCTGGGATCCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWPRRMP*AGIPGS
Trigger: TGACCCAGGGATCCCAGCCCATGGCATCCGCCTAGG...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCACTCGGGCATTGCTTaGAGTTCCGGGGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAHSGIA*SSGVPT
Trigger: TGTGGGAACCCCGGAACTCCAAGCAATGCCCGAGTG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTTGGGATCTATGCAGCTaGGCTGTGTGCCACTCCACG +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAWDLCS*AVCHST
Trigger: CGTGGAGTGGCACACAGCCCAGCTGCATAGATCCCA...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTTTGCTGTTGGCTACCTaGAAGCCGGTGACTCTAAGC +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGLLLAT*KPVTLS
Trigger: GCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAA...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCAGGCCGGGCCAGGATaGGCCAGACACAATGGAGGT +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPQAGPG*ARHNGG
Trigger: ACCTCCATTGTGTCTGGCTCATCCTGGCCCGGCCTG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACCACGTCGATGTCATTaGAGGCCAGGTGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQPRRCH*RPGGCG
Trigger: GCCGCATCCACCTGGCCTTCAATGACATCGACGTGG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGCATGACGTTGCCCATTaGCGGGGATGCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWHDVAH*RGCLGP
Trigger: TGGACCCAGGCATCCCCGTCAATGGGCAACGTCATG...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGAGCGGACTTGAGCGGTaGAGTTGCCATAGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWSGLER*SCHRAR
Trigger: CCGGGCTCTATGGCAACTTCACCGCTCAAGTCCGCT...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTAGCCAGGGTCACAGCTaGAGGTCACCGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSSQGHS*RSPSSL
Trigger: CAGGGAGCTCGGTGACCTTCAGCTGTGACCCTGGCT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTTGCCATGCTGACAGGTaGGGACAGGCTGGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPCHADR*GQAGRS
Trigger: TGACCGGCCAGCCTGTCCTCACCTGTCAGCATGGCA...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTATAGGCGTGGTCAGATaGCCAGCGCAGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAIGVVR*PAQVHR
Trigger: TCTGTGTACCTGCGCTGGTCATCTGACCACGCCTAT...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTAACACCGGGAAGCACTaGGGCAGCTCTCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPNTGKH*GSSPVQ
Trigger: CTGGACCGGAGAGCTGCCTCAGTGCTTCCCGGTGTT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGACTCCACGTCCCGTCTaGCTGGCAAAACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWTPRPV*LAKPPW
Trigger: CCACGGAGGTTTTGCCAGTCAGACGGGACGTGGAGT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCCTGGCAGGAGTAGATaGGTGTGTAACCCATGGATG +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQPGRSR*VCNPWM
Trigger: CATCCATGGGTTACACACTCATCTACTCCTGCCAGG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCCTGAGGTCAAGTCTTTaGAAGCCGAACTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGLRSSL*KPNCPK
Trigger: CTTTGGGCAGTTCGGCTTTCAAAGACTTGACCTCAG...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCTGACTCCAACAGCCTaGGGTCAAGTCTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGLTPTA*GQVFES
Trigger: GCTTTCAAAGACTTGACCTCAGGCTGTTGGAGTCAG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCCAGGATGGTCCATGTaGAGTCAGCATTGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEPGWSM*SQHCCD
Trigger: ATCACAACAATGCTGACTGCACATGGACCATCCTGG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCACAATGGAGGTGGTTaGCATAGTCTTCAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEHNGGG*HSLQGS
Trigger: ACTACCCTGAAGACTATGGCAACCACCTCCATTGTG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCCGGGCGACAGCACCTaGCCTGACACCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSPGDST*PDTSPL
Trigger: AAGAGGAGAGGTGTCAGGGCAGGTGCTGTCGCCCGG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGATTCCACTGGGCCAGTaGCCCAGGTACAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWIPLGQ*PRYREA
Trigger: TGCCTCCCTGTACCTGGGGCACTGGCCCAGTGGAAT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTGTGGAAGTACACGATaGTATCGTGGGACGTGGAGA +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGCGSTR*YRGTWR
Trigger: TCTCCACGTCCCACGATAGCATCGTGTACTTCCACA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGAGAGTCCATTGGCCATaGACTCCCGCACCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWRVHWP*TPAPWS
Trigger: GCTCCAGGGTGCGGGAGTGCATGGCCAATGGACTCT...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGTTCTGTATTCCAAACTaGGGCATGCCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEFCIPN*GMPGSA
Trigger: TGCAGATCCTGGCATGCCGCAGTTTGGAATACAGAA...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCTAAGCATGGCTGGCTaGTTCTTCCCCTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGLSMAG*FFPWYS
Trigger: TGAATACCAGGGGAAGAAGCAGCCAGCCATGCTTAG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACGGCGGCCACTGAGCTaGTGTTGGAAGCAAAGTGCC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQRRPLS*CWKQSA
Trigger: GGCACTTTGCTTCCAACAGCAGCTCAGTGGCCGCCG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGTCTAATGCAAAGGACTaGAACACGAGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGESNAKD*NTSWIL
Trigger: CAGGATCCAGCTCGTGTTCCAGTCCTTTGCATTAGA...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTATCTGCTTCTTGACTTaGTACTGGGCGCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGICFLT*YWALKP
Trigger: AGGCTTCAGCGCCCAGTACCAAGTCAAGAAGCAGAT...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGAGGGACCTCGGAGGTaGGCATCACACATGCGGGCT +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPEGPRR*ASHMRA
Trigger: AGCCCGCATGTGTGATGCCCACCTCCGAGGTCCCTC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCCGCTTGCCGTTAACTaGGACGCCAGGATCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSPLAVN*DARIRA
Trigger: TGCCCGGATCCTGGCGTCCCAGTTAACGGCAAGCGG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTTCAAACACCAGGAAGTaGAGCCCAATGGTGCACCCG +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHASNTRK*SPMVHP
Trigger: CGGGTGCACCATTGGGCTCCACTTCCTGGTGTTTGA...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTTGCACGTGGGCGGGCTaGGCTGCCAGAAGAATCGGT +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPCTWAG*AARRIG
Trigger: ACCGATTCTTCTGGCAGCCCAGCCCGCCCACGTGCA...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGACACTCCTTGCCTGGTaGGTAGGGTTCTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQTLLAW*VGFWVV
Trigger: AACTACCCAGAACCCTACCCACCAGGCAAGGAGTGT...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCTGGAGGGCATATCCTaGCTCACACTGGAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQLEGIS*LTLERD
Trigger: GTCTCTTTCCAGTGTGAGCCAGGATATGCCCTCCAG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGAGGGGACTTCACACCTaGGTAGGGGGTGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWRGLHT*VGGGPS
Trigger: ACTGGGACCACCCCCTACCCAGGTGTGAAGTCCCCT...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCAGCATTGGGGAGGATaGTCGGGGGAGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPQHWGG*SGEGTW
Trigger: CCAAGTGCCCTCCCCCGACCATCCTCCCCAATGCTG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGGCTGGGTGGTTGTCTaGCCCAGGATGAAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPGWVVV*PRMKPW
Trigger: CCACGGCTTCATCCTGGGCCAGACAACCACCCAGCC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACACTCCAGAGTCCATTaGCCATGCACTCCCGCACCC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQHSRVH*PCTPAP
Trigger: GGGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGAGTAAGGCCGTTGACTaGATTGCCTGGGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQSKAVD*IAWVST
Trigger: TGTGGACACCCAGGCAATCCAGTCAACGGCCTTACT...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCACAAACTCCTGTGCTaGTTCCTGAGCAGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAHKLLC*FLSSGG
Trigger: TCCCCCACTGCTCAGGAACCAGCACAGGAGTTTGTG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTTGGGGTTCTCAAATGTaGCCCGCACGTTTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGWGSQM*PARLCS
Trigger: AGAACACAAACGTGCGGGCCACATTTGAGAACCCCA...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGAGGTGCTGGCCGCACTaGCTATGGTGGCTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLRCWPH*LWWLVA
Trigger: AGCTACCAGCCACCATAGTCAGTGCGGCCAGCACCT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTTCACTTTCATGCAGGTaGTTCTCTTGGACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGSLSCR*FSWTLA
Trigger: TGCAAGGGTCCAAGAGAATCACCTGCATGAAAGTGA...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGCCTTCAGAACACAGGTaGTGGTCTCAGAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWPSEHR*WSQSPA
Trigger: CGCAGGGCTCTGAGACCATCACCTGTGTTCTGAAGG...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGAGCCCGAGTCACAGCTaGAGGTCACCAGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLSPSHS*RSPEHP
Trigger: TGGGTGCTCTGGTGACCTTCAGCTGTGACTCGGGCT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAACATCTCAGAGCGGCTaGAGACCCCCAGCAAACGGG +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLTSQSG*RPPANG
Trigger: CCCGTTTGCTGGGGGTCTTCAGCCGCTCTGAGATGT...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGGCCACTCAGCTCCTTaGGGAGGACCCCACTTTCCA +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPGHSAP*GGPHFP
Trigger: TGGAAAGTGGGGTCCTCCTCAAGGAGCTGAGTGGCC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGCAGGACGACCGAGTTaGAGGTGCTGTGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPAGRPS*RCCAGP
Trigger: AGGACCTGCACAGCACCTTCAACTCGGTCGTCCTGC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCGTGGCAGTAGTAGGTaGCAGAAGAACCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQRGSSR*QKNQAS
Trigger: TGAAGCTTGGTTCTTCTGTCACCTACTACTGCCACG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACCTGGTACTCCAGCTTaGATCCTGGCCGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLPGTPA*ILAGSG
Trigger: CCCAGAACCGGCCAGGATTCAAGCTGGAGTACCAGG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGGCTGGCCGGTCAGTTaGTATCCTGGAAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLGWPVS*YPGRHS
Trigger: CGAGTGCCTTCCAGGATATCAACTGACCGGCCAGCC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTTGTCCCGGTGGAACTTaGGCAGGACCTGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPCPGGT*AGPGWR
Trigger: CCTCCAACCAGGTCCTGCTCAAGTTCCACCGGGACA...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTATTCTTCGTTCTCTGTaGCCACTTCAGCATTGGGGA +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGILRSL*PLQHWG
Trigger: TCCCCAATGCTGAAGTGGTCACAGAGAACGAAGAAT...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGACTGGGTCTCAAAGATaGGCCTCCACCGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLTGSQR*ASTGRA
Trigger: AGCACGGCCGGTGGAGGCTCATCTTTGAGACCCAGT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAAGCCAGGGTCACAGATaGGCATCAGCTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLSQGHR*ASAGPG
Trigger: TCCAGGCCCAGCTGATGCTCATCTGTGACCCTGGCT...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGTCTCCACAGGCCCCGTaGCCTGGTAGACTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWSPQAP*PGRLEA
Trigger: TGCTTCAAGTCTACCAGGTCACGGGGCCTGTGGAGA...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCAAAGCCTTGGCCCTTaGCGGAGCCTTGGTAGACGA +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWQSLGP*RSLGRR
Trigger: TCGTCTACCAAGGCTCCGTCAAGGGCCAAGGCTTTG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGATGGACTCGGGATCTaGCTCCAACAGCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWDGLGI*LQQPEV
Trigger: GACCTCAGGCTGTTGGAGTCAGATCCCGAGTCCATC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGATGGCGGCGGCCACTaGGCTGCTGTTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSDGGGH*AAVGSK
Trigger: TTTGCTTCCAACAGCAGCTCAGTGGCCGCCGCCATC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGACGAGCTGGATCCTGTaGTGGTCCTCCGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLTSWIL*WSSAVM
Trigger: CATCACCGCGGAGGACCAGCACAGGATCCAGCTCGT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGATGGAGCTGCCCAGCTaGAGGCTGTCACCAAACCGC +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLMELPS*RLSPNR
Trigger: GCGGTTTGGTGACAGCCTGCAGCTGGGCAGCTCCAT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGTCGGTCCCACGTCCTaGGTTCACCACTCAGACACA +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQVGPTS*VHHSDT
Trigger: TGTGTCTGAGTGGTGAACGCAGGACGTGGGACCGAC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTAAGTCCGTGCTGAACTaGAGGACGACCGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAKSVLN*RTTELK
Trigger: CTTCAACTCGGTCGTCCTGCAGTTCAGCACGGACTT...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGCTCCGACTCCCATTCTaGGGGACTCCCGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLLRLPF*GTPGSL
Trigger: CAATGACCCGGGAGTCCCGCAGAATGGGAGTCGGAG...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGTTCTGGCACAGAGCTaGACTGTGTGGCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWVLAQS*TVWRWF
Trigger: GAACCAGCGCCACACAGTGCAGCTCTGTGCCAGAAC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTTCCATCTCTTCCACTaGTCCCCCACATTGCGCAAT +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQFHLFH*SPTLRN
Trigger: ATTGCGCAATGTGGGGGAGCAGTGGAAGAGATGGAA...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACCGCTGGTGTGGACTTaGCGGACACTGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLPLVWT*RTLFSW
Trigger: CCAGGAGAACAGTGTCCGGCAAGTCCACACCAGCGG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGCATTGCCCAGCCGGATaGCATTGGCTGGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWHCPAG*HWLESQ
Trigger: CTGGGATTCCAGCCAATGGCATCCGGCTGGGCAATG...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAAGGTCCGGTCCTTGGTaGAGCTCAGCACAGACACTC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQRSGPW*SSAQTL
Trigger: GAGTGTCTGTGCTGAGCTGCACCAAGGACCGGACCT...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCGGCATGCCAGGATCTaGACATGTGGTCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSRHARI*TCGQRG
Trigger: CCCACGCTGACCACATGTGCAGATCCTGGCATGCCG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACTGTTGGAAGCAAAGTaGCGGCCGATGGACTCGGGA +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQLLEAK*RPMDSG
Trigger: TCCCGAGTCCATCGGCCGGCACTTTGCTTCCAACAG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGCGGCGGCCACTGAGCTaGTGTTGGAAGCAAAGTGCC +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLRRPLS*CWKQSA
Trigger: GGCACTTTGCTTCCAACAGCAGCTCAGTGGCCGCCG...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAAAGGGAAGTCCCACGTaGCACTGTTCTCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQKGSPT*HCSRSW
Trigger: CCAGCTCCGAGAACAGTGCCACGTGGGACTTCCCTT...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGTCGGATGCTGTAGGCTaGAACCTCGGGCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWSDAVG*NLGLFA
Trigger: TGCGAAGAGCCCGAGGTTCCAGCCTACAGCATCCGA...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTATGCGCAGCACATCGTaGACTTCTTCTGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGMRSTS*TSSVSN
Trigger: GTTTGACACAGAAGAAGTCCACGATGTGCTGCGCAT...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGGATGCAGCTCAGGGTaGAGGCTCCTTCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWGCSSG*RLLPPH
Trigger: ATGAGGTGGAAGGAGCCTCCACCCTGAGCTGCATCC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGAACAATCCATATTACTaGGGTAGTTGCCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGENNPYY*GSCPGN
Trigger: GTTTCCCGGGCAACTACCCCAGTAATATGGATTGTT...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGCCGAAGCTGAATCTGTaGGGCCCGCTGGTGTGGACT +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLPKLNL*GPLVWT
Trigger: AGTCCACACCAGCGGGCCCCACAGATTCAGCTTCGG...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGGCAGGTCCTGGTGGTaGATCCCTGAAGCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWGRSWW*IPEAGN
Trigger: GTTACCTGCTTCAGGGATCCACCACCAGGACCTGCC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTATGTGTAACCCATGGATaGCAGGTCCAGGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLCVTHG*QVQGPD
Trigger: GTCGGGGCCCTGGACCTGCCATCCATGGGTTACACA...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTGGGGTTCTCAAATGTaGCCCGCACGTTTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQWGSQM*PARLCS
Trigger: AGAACACAAACGTGCGGGCCACATTTGAGAACCCCA...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCATGATGTCTGTGGGCTaGATGTTGCGGTCATACATG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGMMSVG*MLRSYM
Trigger: CATGTATGACCGCAACATCCAGCCCACAGACATCAT...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGATGGTGGCTGGTAGCTaGAAGCCGGTGAGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWMVAGS*KPVSLV
Trigger: AACAAGGCTCACCGGCTTTCAGCTACCAGCCACCAT...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGATGGAGGAGGGGAGCTaGTTTCCCGAGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWMEEGS*FPEKVP
Trigger: TGGTACCTTCTCGGGAAATCAGCTCCCCTCCTCCAT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGTCCAGACAGTGGTCTaGCTGCAGTGTAATAGTCTC +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAVQTVV*LQCNSL
Trigger: GAGACTATTACACTGCAGTCAGACCACTGTCTGGAC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGTGCCACTGGAACCTTaGATGAAGCCACCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWVPLEP*MKPPQR
Trigger: TCTCTGCGGTGGCTTCATTCAAGGTTCCAGTGGCAC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACTGAGTGCCTGTGACTaGGTTCCCACACTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLLSACD*VPTLRN
Trigger: GTTGCGGAGTGTGGGAACTCAGTCACAGGCACTCAG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCGACAGCACCTGCCCTaGCACCTCTCCTCTTACTGT +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPRQHLP*HLSSYC
Trigger: ACAGTAAGAGGAGAGGTGTCAGGGCAGGTGCTGTCG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGGTTGCGGTGGACACTaGGAACTGGATGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSGCGGH*ELDGKA
Trigger: GGCTTTGCCATCCAGTTCTCAGTGTCCACCGCAACC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCGATCATGGTGGCGTTaGCCTTGCTGTTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWRSWWR*PCCWLP
Trigger: AGGTAGCCAACAGCAAGGTCAACGCCACCATGATCG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCCCAGTGGTCATCTTTaGACTTATTCACAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEPSGHL*TYSQSS
Trigger: AGAGCTTTGTGAATAAGTTCAAAGATGACCACTGGG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCAAAGCCTTGGCCCTTaGCGGAGCCTTGGTAGACGA +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSQSLGP*RSLGRR
Trigger: TCGTCTACCAAGGCTCCGTCAAGGGCCAAGGCTTTG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCTGACTCCAACAGCCTaGGGTCAAGTCTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHALTPTA*GQVFES
Trigger: GCTTTCAAAGACTTGACCTCAGGCTGTTGGAGTCAG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCCGCCTCGTTGCTCATaGTGTCTGTGGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSPPRCS*CLWAGC
Trigger: ACATCCAGCCCACAGACATCATGAGCAACGAGGCGG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAGGCCATAGGCAGGTATaGCAGGGTCTCCACAACTGC +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLGHRQV*QGLHNC
Trigger: GCAGTTGTGGAGACCCTGGCATACCTGCCTATGGCC...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTATGGTCTCAGAGCCCTaGGTCCCGAGGAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPMVSEP*VPRKPS
Trigger: TGAAGGCTTCCTCGGGACGCAGGGCTCTGAGACCAT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGTGTTCCACACCACGCTaGCCTCCTTCAGAACACAGG +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWCSTPR*PPSEHR
Trigger: CCTGTGTTCTGAAGGAGGGCAGCGTGGTGTGGAACA...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGTCCAGTCACACTCCTTaGCTGGTGGGTAGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWSSHTP*LVGRVL
Trigger: CAGAACCCTACCCACCAGGCAAGGAGTGTGACTGGA...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGCACCACAGGGAGCTGTaGAAACTGGCCTCGGATTGT +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWHHREL*KLASDC
Trigger: ACAATCCGAGGCCAGTTTGCACAGCTCCCTGTGGTG...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTAGATGCGCACAGACATaGCGATCAGGCGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPRCAQT*RSGGSQ
Trigger: CTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCACCACAAACTCCTGTaGTGGTTCCTGAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWHHKLL*WFLSSG
Trigger: CCCACTGCTCAGGAACCAGCACAGGAGTTTGTGGTG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGACACCACTCGGGCATTaGTTGGAGTTCCGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLTPLGH*LEFRGS
Trigger: GGAACCCCGGAACTCCAAGCAATGCCCGAGTGGTGT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGATTGGGCAGCCTCCCTaGGTTCCCACAAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWIGQPP*VPTSVT
Trigger: AGTCACACTTGTGGGAACCCAGGGAGGCTGCCCAAT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAAAGGTGGAGCCTTGCTaGATACCATTGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQKVEPC*IPLGSL
Trigger: GAGGCTGCCCAATGGTATCCAGCAAGGCTCCACCTT...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCAGGTATGCCAGGGTCTaGACACATATTATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGRYARV*THIMSL
Trigger: CAAGGACATAATATGTGTCCAGACCCTGGCATACCT...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGCTGACGATGAGGTCTaGGACGGAGGTACCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPADDEV*DGGTCQ
Trigger: CTGACAGGTACCTCCGTCCCAGACCTCATCGTCAGC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTTCTTAGCCGACCACTaGTTATTCTTTTGGCACGTG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGFLADH*LFFWHV
Trigger: CACGTGCCAAAAGAATAACCAGTGGTCGGCTAAGAA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGTGGAGTGGTCAGTCTaGAACTCTAGACGGGCCACA +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWVEWSV*NSRRAT
Trigger: TGTGGCCCGTCTAGAGTTCCAGACTGACCACTCCAC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAGAACTGTGGGGTCCCTaGGTCCTCACATCGGATGAG +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLELWGP*VLTSDE
Trigger: CTCATCCGATGTGAGGACCCAGGGACCCCACAGTTC...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTTGCTGTGCAGGTCCTTaGGCAGCATTGGGCCACTCA +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSCCAGP*AALGHS
Trigger: TGAGTGGCCCAATGCTGCCCAAGGACCTGCACAGCA...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGTCACACTCCTTGCCTaGTGGGTAGGGTTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQVTLLA*WVGFWV
Trigger: TACCCAGAACCCTACCCACCAGGCAAGGAGTGTGAC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGAGAAACTCCCCAGCATaGTTACGGTGTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQRNSPA*LRCYLL
Trigger: GAGCAGATAACACCGTAACCATGCTGGGGAGTTTCT...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGGGAGATAGAGTTGATTaGAGGTGCTATTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQGDRVD*RCYSGG
Trigger: CCCTCCTGAATAGCACCTCCAATCAACTCTATCTCC...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTATGTGGGCATGGCCCTaGAGGGCATATCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPMWAWP*RAYPGS
Trigger: TGAGCCAGGATATGCCCTCCAGGGCCATGCCCACAT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCGTGGTTGGGCTCCGTaGAGAAGTTCAAAAACTGGA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHARGWAP*RSSKTG
Trigger: TCCAGTTTTTGAACTTCTCCACGGAGCCCAACCACG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGATTTCTAAGAAGTCGTaGTTGGGCTCCGTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQISKKS*LGSVEK
Trigger: CTTCTCCACGGAGCCCAACCACGACTTCTTAGAAAT...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGTTCCCATCATGCGGCTaGTCTCGGAGGGGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGFPSCG*SRRGRS
Trigger: GGAGCGGCCCCTCCGAGACCAGCCGCATGATGGGAA...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGCAGGTCTGGAACTGTaGGTAGCTTCCGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWAGLEL*VASGIA
Trigger: AGCTATCCCGGAAGCTACCCACAGTTCCAGACCTGC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGATGAAGCCGTGGAGTaGAGCCTTAGGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLDEAVE*SLRQAA
Trigger: TGCAGCCTGCCTAAGGCTCCACTCCACGGCTTCATC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGTTGACAATGGGCTCTaGAGTCCCACAGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQVDNGL*SPTVSS
Trigger: GCTGGACACTGTGGGACTCCAGAGCCCATTGTCAAC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGGTGTCCACAGGTAATTaGCACACAGAAAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQVSTGN*HTERGL
Trigger: AAGACCCCTTTCTGTGTGCCAATTACCTGTGGACAC...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCAGGTGCCGTCTCCCTaGCAGCTGAGGGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGQVPSP*QLRAGV
Trigger: CACTCCTGCCCTCAGCTGCCAGGGAGACGGCACCTG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAGGTGGAGAGCCAGGATaGCCACAGGACACCAAGAGA +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLGGEPG*PQDTKR
Trigger: TCTCTTGGTGTCCTGTGGCCATCCTGGCTCTCCACC...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGATGGGCTGGGATCCCTaGGTCACCACAAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWMGWDP*VTTNSC
Trigger: ACAGGAGTTTGTGGTGACCCAGGGATCCCAGCCCAT...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGATCCCCGGAGCACGTaGCCAGCGTCACAACTAAAG +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSDPRST*PASQLK
Trigger: CTTTAGTTGTGACGCTGGCCACGTGCTCCGGGGATC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGAGCACCAGAGGAGCGTaGCAGGAGAAGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWSTRGA*QEKDTD
Trigger: ATCTGTGTCCTTCTCCTGCCACGCTCCTCTGGTGCT...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGAAGGCAGGTCCTGGTaGTGGATCCCTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPEGRSW*WIPEAG
Trigger: ACCTGCTTCAGGGATCCACCACCAGGACCTGCCTTC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGTGTGTGGGCGTCTCTaGTTGTTTGCAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSVCGRL*LFAVVG
Trigger: CCCCACCACTGCAAACAACCAGAGACGCCCACACAC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAAGTTCCACCCCACTGTaGTCGATCATGGTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQSSTPL*SIMVAL
Trigger: CAACGCCACCATGATCGACCACAGTGGGGTGGAACT...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTTGTTGCGGTCATACATaGGGTTCTCAAATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHACCGHT*GSQMWP
Trigger: GGGCCACATTTGAGAACCCCATGTATGACCGCAACA...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGTGTGTGGGCGTCTCTaGTTGTTTGCAGTGGTGGGN +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWVCGRL*LFAVVG
Trigger: NCCCACCACTGCAAACAACCAGAGACGCCCACACAC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCACGCCCTTGCCATGTaGTGTCTCAATAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWHALAM*CLNNPG
Trigger: ACCTGGGTTATTGAGACATCACATGGCAAGGGCGTG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTACAAAACTGATGACTTaGATCTGGATGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHATKLMT*IWMPAP
Trigger: AGGCGCTGGCATCCAGATTCAAGTCATCAGTTTTGT...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTTTGAACTGGCTGCCCTaGGTAAGGCCGTTGACTGGA +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSLNWLP*VRPLTG
Trigger: TCCAGTCAACGGCCTTACTCAGGGCAGCCAGTTCAA...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACCTGGCAGGAGTAGATaGGTGTGTAACCCATGGATG +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQPGRSR*VCNPWM
Trigger: CATCCATGGGTTACACACTCATCTACTCCTGCCAGG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGGAAGAAGCCGGGGTTaGAGCTATAGCGGACCTTGT +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLGRSRG*SYSGPC
Trigger: ACAAGGTCCGCTATAGCTGCAACCCCGGCTTCTTCC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCGAGGAAGAGGCTGTTaGTGCTGCTTTCAATGCGGC +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSRGRGC*CCFQCG
Trigger: GCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCTGTCTTCACCCCATTaGTGGGTACAGCTGGTTCGG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPLSSPH*WVQLVR
Trigger: CCGAACCAGCTGTACCCAGCAATGGGGTGAAGACAG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTATATTACTGGGGTAGTTaGCCGGGAAACCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLYYWGS*PGNRGS
Trigger: TGAGCCCCGGTTTCCCGGGCAACTACCCCAGTAATA...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAGGTAGAAGCCGTGGTTaGACTGGTAGGAAACGGTGG +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLGRSRG*TGRKRW
Trigger: CCACCGTTTCCTACCAGTGCAACCACGGCTTCTACC...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGAGCTCAAAGGCAGGCTaGCATTCAAACTCGAGCGTG +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWSSKAG*HSNSSV
Trigger: CACGCTCGAGTTTGAATGCCAGCCTGCCTTTGAGCT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGAGTCTTCAGGGTAGTTaGGAGACAGGACGATCCCGG +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLSLQGS*ETGRSR
Trigger: CCGGGATCGTCCTGTCTCCCAACTACCCTGAAGACT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGGGAGCTGTGCAAACTaGCCTCGGATTGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWGSCAN*PRIVPH
Trigger: ATGTGGAACAATCCGAGGCCAGTTTGCACAGCTCCC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGAACTTGATTGGAGGTaGCCAAGGGCAGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSELDWR*PRAATL
Trigger: GAGAGTCGCTGCCCTTGGCCACCTCCAATCAAGTTC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGAGGCTGTTGAGATATaGCTCTGGGAAGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLEAVEI*LWEARG
Trigger: TCCCCTGGCTTCCCAGAGCCATATCTCAACAGCCTC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACTCCAGCTTGAATCCTaGCCGGTTCTGGGAATGGTC +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLLQLES*PVLGMV
Trigger: GACCATTCCCAGAACCGGCCAGGATTCAAGCTGGAG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGAATGCGGTGCCCACTTaGGGGTGTGGGGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGNAVPT*GCGELS
Trigger: GGAGAGCTCCCCACACCCCCAAGTGGGCACCGCATT...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCATTTGGGCATGAGGTaGAGAGCCAGGATGGCCACA +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSHLGMR*RARMAT
Trigger: TGTGGCCATCCTGGCTCTCCACCTCATGCCCAAATG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACATAGACAACGGAACTaGAGAACACCAGGCCATCGC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQHRQRN*RTPGHR
Trigger: GCGATGGCCTGGTGTTCTCCAGTTCCGTTGTCTATG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCTGGCAAAACCTCCGTaGGGAGCCCACCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGLAKPP*GAHQHQ
Trigger: CTGGTGCTGGTGGGCTCCCCACGGAGGTTTTGCCAG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGACTCTAAGCATGGCTaGCTGCTTCTTCCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWDSKHG*LLLPLV
Trigger: TACCAGGGGAAGAAGCAGCCAGCCATGCTTAGAGTC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTAGTTCCACCCCACTGTaGTCGATCATGGTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSSSTPL*SIMVAL
Trigger: CAACGCCACCATGATCGACCACAGTGGGGTGGAACT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCCATCTAACGCCCAGTaGTCATCTTTGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGPSNAQ*SSLNLF
Trigger: GAATAAGTTCAAAGATGACCACTGGGCGTTAGATGG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 72 bp CAGACGGCAGCATCCAGATTAGACACACACATCTTCTaGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: QTAASRLDTHIF*LRLPSLPAFGA
Trigger: GGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGATGTGTGTGTCTAATCTGGATGCTGCCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGACTTGGTACTGGGCGCTaGAGCCTCGCTGCCGGTGGT +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRLGTGR*SLAAGG
Trigger: ACCACCGGCAGCGAGGCTTCAGCGCCCAGTACCAAG...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAAGTTGCTTGAGCTGGTaGCAATCAAGGGAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLSCLSW*QSREPS
Trigger: ACTCGGCTCCCTTGATTGTCACCAGCTCAAGCAACT...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACAGGAGCCATTGGCTTaGCACATTCGCTCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLQEPLA*HIRSED
Trigger: ATCTTCCGAGCGAATGTGTCAAGCCAATGGCTCCTG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAATCTGGTTATTGTCCTTaGTGGGCATCAGCTTCACGC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQSGYCP*WASASR
Trigger: GCGTGAAGCTGATGCCCAGCAAGGACAATAACCAGA...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACCTGTGGTCACTCCATaGTGCAAACATGTCGCTCAC +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLPVVTP*CKHVAH
Trigger: GTGAGCGACATGTTTGCAGCATGGAGTGACCACAGG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACTTGGCAGGGTTGAGTaGAGTGATGATCCACACGCA +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLLGRVE*SDDPHA
Trigger: TGCGTGTGGATCATCACTGCACTCAACCCTGCCAAG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTTTGCTGGTGTTTTCTaGATCTGTGATGAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGFAGVF*ICDEVK
Trigger: CTTGACTTCATCACAGATGCAGAAAACACCAGCAAA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGTGGATGGCAAAGCCTTaGTTGCTGGTGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWWMAKP*LLVKKS
Trigger: GGACTTCTTCACCAGCAAGCAAGGCTTTGCCATCCA...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGGTAGGTTCCCAGCTTaGAGGTCAGGATTTCACTCC +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSGRFPA*RSGFHS
Trigger: GGAGTGAAATCCTGACCTGCAAGCTGGGAACCTACC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACACAGAAAGGGGTCTTaGCCGACCAGTGATGATCCT +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLHRKGS*PTSDDP
Trigger: AGGATCATCACTGGTCGGGCAAGACCCCTTTCTGTG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGAGCTGGATCCTGTGCTaGTCCTCCGCGGTGATGGTC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGSWILC*SSAVMV
Trigger: GACCATCACCGCGGAGGACCAGCACAGGATCCAGCT...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCCATCTGATGTGAAGTaGAGCCGCAGCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPPSDVK*SRSQFL
Trigger: CAAGAACTGGCTGCGGCTCCACTTCACATCAGATGG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGTCGTTGCAGGTGAACTaGACGCTGGATCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLSLQVN*TLDPNL
Trigger: CAGGTTAGGATCCAGCGTCCAGTTCACCTGCAACGA...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGGAAAACACACAGCCTaGCTTCTTAGCCGACCACTG +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLGKHTA*LLSRPL
Trigger: CAGTGGTCGGCTAAGAAGCCAGGCTGTGTGTTTTCC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACAGGACGATCCCGGATaGACTGGTGAAGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQQDDPG*TGEVEE
Trigger: TTCTTCAACTTCACCAGTCCATCCGGGATCGTCCTG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGTCATTGAAGGCCAGGTaGATGCGGCTCTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGSLKAR*MRLSGR
Trigger: CCGGCCTGAGAGCCGCATCCACCTGGCCTTCAATGA...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTAACCCCTCTTCCCTGTaGAGTGGTCAGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSNPSSL*SGQSGT
Trigger: AGTTCCAGACTGACCACTCCACAGGGAAGAGGGGTT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGACACTGAGAACTGGATaGCAAAGCCTTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWTLRTG*QSLACW
Trigger: CCAGCAAGCAAGGCTTTGCCATCCAGTTCTCAGTGT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGGCGATGACGTAGTCTaGAGAGACGGTCACTTTCCA +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSGDDVV*RDGHFP
Trigger: TGGAAAGTGACCGTCTCTCCAGACTACGTCATCGCC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGTTCTGGGGGTAGTTTaGAGACAGGACCACTCCATC +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSVLGVV*RQDHSI
Trigger: GATGGAGTGGTCCTGTCTCCAAACTACCCCCAGAAC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGTCTTATATTCCAAGTaGAAGCCAGCAGCAGACACA +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHAVLYSK*KPAADT
Trigger: TGTGTCTGCTGCTGGCTTCCACTTGGAATATAAGAC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGATTGCTGGGTACAGCTaGTTCGGGACAACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWIAGYS*FGTTAQ
Trigger: TTGAGCAGTTGTCCCGAACCAGCTGTACCCAGCAAT...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGTACACGATGCTATCGTaGGACGTGGAGAGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLYTMLS*DVESRD
Trigger: ATCCCTGCTCTCCACGTCCCACGATAGCATCGTGTA...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTATTGGCAAAAGGCTCTaGGTCTGGGCACTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPIGKRL*VWALLE
Trigger: CTCCAAGAGTGCCCAGACCCAGAGCCTTTTGCCAAT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGGTCAGTTGATATCCTaGAAGGCACTCGAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWGQLIS*KALEGH
Trigger: GTGACCTTCGAGTGCCTTCCAGGATATCAACTGACC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGGGGGACACAGTCAGGTaGGGTTCCACTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGGDTVR*GSTPGQ
Trigger: CTGACCTGGAGTGGAACCCCACCTGACTGTGTCCCC...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGACTCTAAGCATGGCTaGCTGCTTCTTCCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLDSKHG*LLLPLV
Trigger: TACCAGGGGAAGAAGCAGCCAGCCATGCTTAGAGTC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGTGTTGCGGTCATACATaGGGTTCTCAAATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWCCGHT*GSQMWP
Trigger: GGGCCACATTTGAGAACCCCATGTATGACCGCAACA...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGCATTGTTGTCATACTaGATGGGGAAGTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLALLSY*MGKLGD
Trigger: GTCCCCCAACTTCCCCATTCAGTATGACAACAATGC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCTGAAAGCCGATGTCTaGGTGACTCTTGTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWLKADV*VTLVSR
Trigger: TCTACTGACAAGAGTCACTCAGACATCGGCTTTCAG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAATGGTCCAGATGCAGTTaGGATTGTGTTCATAGGGAG +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQWSRCS*DCVHRE
Trigger: CTCCCTATGAACACAATCTCAACTGCATCTGGACCA...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGAGTTTGGTGACAGAATaGCTCCTGATGGCCCGGTTA +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLSLVTE*LLMARL
Trigger: TAACCGGGCCATCAGGAGTCATTCTGTCACCAAACT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTAACTTGATGAGAACTTaGTTGGAGGTGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPNLMRT*LEVAKG
Trigger: GCCCTTGGCCACCTCCAATCAAGTTCTCATCAAGTT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCTGCAGGGCATAGCCTaGGTTGCATTCAAAGCGAAT +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPLQGIA*VAFKAN
Trigger: ATTCGCTTTGAATGCAACTCAGGCTATGCCCTGCAG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCCGAGTAATTCCCACTaGGAGCTTTCAGTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPPSNSH*ELSVED
Trigger: GTCCTCTACTGAAAGCTCTCAGTGGGAATTACTCGG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGTACACAGAGTTGCTTaGGCTGGTGACAATCAAGGG +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLVHRVA*AGDNQG
Trigger: CCCTTGATTGTCACCAGCTCAAGCAACTCTGTGTAC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGGCTCTCCACAGGAGATaGTTTGGCAGGTGGGCATCG +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGALHRR*FGRWAS
Trigger: CGATGCCCACCTGCCAAATCATCTCCTGTGGAGAGC...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGCCATTCGGGATGAGCTaGGGAGGTTTGCACATGATA +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLPFGMS*GGLHMI
Trigger: TATCATGTGCAAACCTCCTCAGCTCATCCCGAATGG...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACTGAGGTCAAGTCTTTaGAAGCCGAACTGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLLRSSL*KPNCPK
Trigger: CTTTGGGCAGTTCGGCTTTCAAAGACTTGACCTCAG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGGCCCTGGGCACTGACTaGATAGTCGCTGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGALGTD*IVADEA
Trigger: AGCCTCATCAGCGACTATGCAGTCAGTGCCCAGGGC...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGTGGTCACTCCATGCTaGAAACATGTCGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQVVTPC*KHVAHF
Trigger: AAAGTGAGCGACATGTTTGCAGCATGGAGTGACCAC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGAGCATTGCTCACAGATaGGTCGCTGCGGAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGSIAHR*VAAEGE
Trigger: CTCGCCTTCCGCAGCGACGCATCTGTGAGCAATGCT...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAACTCCACACTCAGGCTaGGACCCGCTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRTPHSG*DPLQEP
Trigger: TGGCTCCTGGAGCGGGTCGCAGCCTGAGTGTGGAGT...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAAGCTGCCGTCGGCTTTaGAGGTACGGTGCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRSCRRL*RYGARS
Trigger: GCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCT...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGGTTTGCCTGTCCAGCTaGCGTCGGCTTTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGVCLSS*RRLCRY
Trigger: GTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAAC...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCTTTTTATAGTTTCCTaGCAAATGCAGTTCCACCCC +
Preference number: 4 (lower is better)
Translates to: CYRCANGATPAARWLLHALFIVS*QMQFHP
Trigger: GGGGTGGAACTGCATTTGGCAGGAAACTATAAAAAG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCTTGCTGGATACCATTaGGCAGCCTCCCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGLAGYH*AASLGS
Trigger: GGAACCCAGGGAGGCTGCCCAATGGTATCCAGCAAG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGCAAGTTCAGCCAGGATaGTCCATGTGCAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLQVQPG*SMCSQH
Trigger: ATGCTGACTGCACATGGACCATCCTGGCTGAACTTG...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGCCTGGGTCCAGACAGTaGTCTGACTGCAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLPGSRQ*SDCSVI
Trigger: TATTACACTGCAGTCAGACCACTGTCTGGACCCAGG...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTACCCTGGTGACAAGATaGTGCCACTGGAACCTTGAA +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSTLVTR*CHWNLE
Trigger: TTCAAGGTTCCAGTGGCACCATCTTGTCACCAGGGT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGAGTTGCCTCAGGGGCTaGGAGAAGCTGCCGTTCTCA +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGSCLRG*EKLPFS
Trigger: TGAGAACGGCAGCTTCTCCCAGCCCCTGAGGCAACT...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGGTCCTTGGGCAGCATTaGGCCACTCAGCTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGVLGQH*ATQLLE
Trigger: CTCAAGGAGCTGAGTGGCCCAATGCTGCCCAAGGAC...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCTAAGAAGTCGTGGTTaGGCTCCGTGGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPLRSRG*APWRSS
Trigger: TGAACTTCTCCACGGAGCCCAACCACGACTTCTTAG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGTTCGCATATTGGGGGTaGACCTTCAAACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWFAYWG*TFKLQV
Trigger: TACCTGCAGTTTGAAGGTCCACCCCCAATATGCGAA...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAGTTGACTGGATTGCCTaGGTGTCCACAGGTAATTGG +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLVDWIA*VSTGNW
Trigger: CCAATTACCTGTGGACACCCAGGCAATCCAGTCAAC...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGTCCAGGTCCGGTCCTTaGTGCAGCTCAGCACAGACA +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGSRSGP*CSSAQT
Trigger: TGTCTGTGCTGAGCTGCACCAAGGACCGGACCTGGA...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGTGGGACACACCAACCTaGGTTAACACAGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLWDTPT*VNTDVF
Trigger: GAAGACATCTGTGTTAACTCAGGTTGGTGTGTCCCA...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTAAGCCGATGTCTGAGTaGCTCTTGTCAGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPKPMSE*LLSVEK
Trigger: CTTCTCTACTGACAAGAGTCACTCAGACATCGGCTT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGACAGCTGGGCAGGGCGTaGCTCCACTGGAAATTTGGC +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRQLGRA*LHWKFG
Trigger: GCCAAATTTCCAGTGGAGTCACGCCCTGCCCAGCTG...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCAGGACCACTCCATCTaGACCCACATACTGTCCACC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGQDHSI*THILST
Trigger: GGTGGACAGTATGTGGGTTCAGATGGAGTGGTCCTG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGCACTCGAAGGTCACTaGTTGTCCAACATTATAGCC +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPALEGH*LSNIIA
Trigger: GGCTATAATGTTGGACAATCAGTGACCTTCGAGTGC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGAGGCGTCATCCGCTCTaGAGGAAGGCAAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGRRHPL*RKAKGS
Trigger: ACTTCCCTTTGCCTTCCTGCAGAGCGGATGACGCCT...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGACATCAGGTCCCAGGATaGAGCTCAGGGTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRHQVPG*SSGWRL
Trigger: GAGCCTCCACCCTGAGCTGCATCCTGGGACCTGATG...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTAGAGTTGATTGGAGGTaGTATTCAGGAGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSRVDWR*YSGGLV
Trigger: TACCAGCCCTCCTGAATAGCACCTCCAATCAACTCT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTTCCAGGTGGAAGGTATaGAAAGTAAAGAACACGCCC +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSSRWKV*KVKNTP
Trigger: GGGCGTGTTCTTTACTTTCCATACCTTCCACCTGGA...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCAGAAGAATCGGTTCTaGATCTTCACGCAGCTGATC +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSQKNRF*IFTQLI
Trigger: GATCAGCTGCGTGAAGATCCAGAACCGATTCTTCTG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGACCTGGAACTGAGGCTTaGGTGAGCATAGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRPGTEA*VSIGSR
Trigger: CCGGGAGCCTATGCTCACCCAAGCCTCAGTTCCAGG...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGTCCACAAGGAGTTCTTaGCAAAAACATCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWSTRSS*QKHPLE
Trigger: TTCCAGGGGATGTTTTTGCCAAGAACTCCTTGTGGA...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTATGATGTCTGTGGGCTaGATGTTGCGGTCATACATG +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPMMSVG*MLRSYM
Trigger: CATGTATGACCGCAACATCCAGCCCACAGACATCAT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 72 bp AGGAGCTGGAGAGAATGGGATTTTTGCTCCGTTCTCTaGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RSWREWDFCSVL*IKELPGPLLWL
Trigger: CAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAAGAGAACGGAGCAAAAATCCCATTCTCTCCAGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAAGCCCTCGTTGCAGGTaGACTGGACGCTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRSPRCR*TGRWIL
Trigger: TAGGATCCAGCGTCCAGTTCACCTGCAACGAGGGCT...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGTCGAAACTAGAGAACTaGAGTTCAAAGCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWSKLEN*SSKPLL
Trigger: CAGCAAAGGCTTTGAACTTCAGTTCTCTAGTTTCGA...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCATAGAAGCTTCCTATaGGAGGGCTCAGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGHRSFL*EGSESP
Trigger: GGGACTCTCTGAGCCCTCTCATAGGAAGCTTCTATG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCTCGAGTGCCGTTCTTaGTCGAACCAGGGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGLECRS*SNQGQN
Trigger: GTTTTGACCCTGGTTCGATCAAGAACGGCACTCGAG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCAGTCTTGTTGTACCTaGAGTCATTGCCCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGQSCCT*SHCPAG
Trigger: TCCGGCTGGGCAATGACTTCAGGTACAACAAGACTG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGACTTCAGCTCAATCTaGTTCTTGACTTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSDFSSI*FLTWYW
Trigger: CCAGTACCAAGTCAAGAAGCAGATTGAGCTGAAGTC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAATTCAGCGAGCTCAAATaGCTTGGCTTTAAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQFSELK*LGFKLN
Trigger: ATTCAGCTTAAAGCCAAGGCATTTGAGCTCGCTGAA...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGACATCAGTTCCTCACTaGCCCGAAGACTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGTSVPH*PEDCSQ
Trigger: CTGGCTACAGTCTTCGGGGCAGTGAGGAACTGATGT...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGACGTCCAGTCCACACATaGGGGTGGAGTTTCCCACCA +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRRPVHT*GWSFPP
Trigger: TGGTGGGAAACTCCACCCGCATGTGTGGACTGGACG...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAGTTTGCCTGTCCAGCTaGCGTCGGCTTTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRVCLSS*RRLCRY
Trigger: GTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAAC...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACTTTTTATAGTTTCCTaGCAAATGCAGTTCCACCCC +
Preference number: 4 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQLFIVS*QMQFHP
Trigger: GGGGTGGAACTGCATTTGGCAGGAAACTATAAAAAG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGAACACAGATGTCTTCTaGTTATTGTCCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLNTDVF*LLSLLG
Trigger: GCCCAGCAAGGACAATAACCAGAAGACATCTGTGTT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCTGCAGAGCATAGCCTaGGTCACACTGGAACACTGT +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGLQSIA*VTLEHC
Trigger: ACAGTGTTCCAGTGTGACCCAGGCTATGCTCTGCAG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTACACAATTCCATTTTTaGGAGCATCAGGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPTQFHF*EHQGDH
Trigger: GTGGTCTCCCTGATGCTCCCAAAAATGGAATTGTGT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGATGGGAAGGCAGGTCCTaGTGGTGGATCCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRWEGRS*WWIPEA
Trigger: TGCTTCAGGGATCCACCACCAGGACCTGCCTTCCCA...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGTTGCTGTTGGCTACCTaGAAGCCGGTGACTCTAAGC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGLLLAT*KPVTLS
Trigger: GCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAA...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGACCACTGAGCTGCTGTTaGAAGCAAAGTGCCGGCCGA +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRPLSCC*KQSAGR
Trigger: TCGGCCGGCACTTTGCTTCCAACAGCAGCTCAGTGG...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAGACAGCAAAGTGCCCTaGGTGCCTGTGACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRDSKVP*VPVTEF
Trigger: GAACTCAGTCACAGGCACTCAGGGCACTTTGCTGTC...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR TCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGCCCAGTGGTCATCTTTaGACTTATTCACAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLPSGHL*TYSQSS
Trigger: AGAGCTTTGTGAATAAGTTCAAAGATGACCACTGGG...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR GCA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGATCCACACGCAGTGTaGATTGTTGTCATACTGAAT +
Preference number: 4 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLDPHAV*IVVILN
Trigger: ATTCAGTATGACAACAATGCACACTGCGTGTGGATC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAGAAGTTCAAAGCCTTTaGTGGTGTTTTCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLEVQSL*WCFLHL
Trigger: CAGATGCAGAAAACACCAGCAAAGGCTTTGAACTTC...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGACACACTGGAACACTGTaGTATCACCGGCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRHTGTL*YHRLPS
Trigger: GCTGGGAAGCCGGTGATAGCACAGTGTTCCAGTGTG...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCCACGGTGTACTCCTTaGCAAACACAATTCCATTTT +
Preference number: 4 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSPRCTP*QTQFHF
Trigger: AAAATGGAATTGTGTTTGGCAAGGAGTACACCGTGG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGAGCACGTCTGTCCACTaGTATAGTTCTGGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGSTSVH*YSSGGS
Trigger: ACTACCCCCAGAACTATACCAGTGGACAGACGTGCT...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGATCATTGAGGGCCGTGTaGAAGAAGGCAAACTGGCCG +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRSLRAV*KKANWP
Trigger: CGGCCAGTTTGCCTTCTTCCACACGGCCCTCAATGA...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCCATCTAACGCCCAGTaGTCATCTTTGAACTTATTC +
Preference number: 4 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPPSNAQ*SSLNLF
Trigger: GAATAAGTTCAAAGATGACCACTGGGCGTTAGATGG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR TCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCTCCAGGTCATACTCTaGGAAGGTGATGTTGAATCC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGLQVIL*EGDVES
Trigger: GGATTCAACATCACCTTCTCAGAGTATGACCTGGAG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR GCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGGTGTATATCCGGAATTaGAGGAGAAGATGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGVYIRN*RRRWQS
Trigger: CGACTGCCATCTTCTCCTGCAATTCCGGATATACAC...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAAAAAGGCTCTGGGTCTaGGCACTCTTGGAGTTCGTA +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRKRLWV*ALLEFV
Trigger: TACGAACTCCAAGAGTGCCCAGACCCAGAGCCTTTT...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAGTGCACTTCGCATATTaGGGGTGGACCTTCAAACTG +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRVHFAY*GWTFKL
Trigger: CAGTTTGAAGGTCCACCCCCAATATGCGAAGTGCAC...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGACTTGACAGAGAGGAATaGCCTCACTCCATAGGTGGT +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRLDREE*PHSIGG
Trigger: ACCACCTATGGAGTGAGGCCATTCCTCTCTGTCAAG...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAAATTGCAGGAGAAGATaGCAGTCGCCCCATAGACAG +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRNCRRR*QSPHRQ
Trigger: CTGTCTATGGGGCGACTGCCATCTTCTCCTGCAATT...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGATGCAGTTCAAGTTGTTaGGGTAGAAGTCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRCSSSC*GRSQGT
Trigger: GGTTCCCTGACTTCTACCCCAACAACTTGAACTGCA...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCACTGGTTATTCTTTTaGCACGTGATTGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGHWLFF*HVIDFC
Trigger: GCAGAAATCAATCACGTGCCAAAAGAATAACCAGTG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CCA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGATCCACAAGGAGTTCTTaGCAAAAACATCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRSTRSS*QKHPLE
Trigger: TTCCAGGGGATGTTTTTGCCAAGAACTCCTTGTGGA...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
3UTR CAA 72 bp CATTCTTCATGTCCCTACACATGGGGACACATTGGTTaGAGAGGCAATGATGCTTTTCTCATCATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSSCPYTWGHIG*RGNDAFLIISS
Trigger: AGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CCA 90 bp GAGCAGCCCCCAGCCCAGCAGCAGCAGCAGCGGTGGCGGCGGTGGTaGCGGCGGTGGTGGTGGCGGCGGGCGGCCCCAGCGACTCCCGGT +
Preference number: 5 (lower is better)
Translates to: EQPPAQQQQQRWRRW*RRWWWRRAAPATPG
Trigger: ACCGGGAGTCGCTGGGGCCGCCCGCCGCCACCACCACCGCCGCCACCACCGCCGCCACCGCTGCTGCTGCTGCTGGGCTGGGGGCTGCTC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CAGCAGCAGCAGCAGCGGTGGCGGCGGTGGTGGCGGCGGTGGTGGTaGCGGCGGGCGGCCCCAGCGACTCCCGGTACCCGGCACAAGCGC +
Preference number: 5 (lower is better)
Translates to: QQQQQRWRRWWRRWW*RRAAPATPGTRHKR
Trigger: GCGCTTGTGCCGGGTACCGGGAGTCGCTGGGGCCGCCCGCCGCCACCACCACCGCCGCCACCACCGCCGCCACCGCTGCTGCTGCTGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CGCTGGGCCGGACCTCCAGGCAGACGGGCGGTTTGCCTGTCCAGCTaGCGTCGGCTTTGCAGGTACGGTGCTCGGAGCCACCCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: RWAGPPGRRAVCLSS*RRLCRYGARSHPGG
Trigger: CCCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGAGGTCCGGCCCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp CCTGAAGGTGGAATGTGCAGTTCTGGCCCGCGGCAGCCGAGGCACTaGGCAGCCCCCAGCCCAGCAGCAGCAGCAGCGGTGGCGGCGGTG +
Preference number: 5 (lower is better)
Translates to: PEGGMCSSGPRQPRH*AAPSPAAAAAVAAV
Trigger: CACCGCCGCCACCGCTGCTGCTGCTGCTGGGCTGGGGGCTGCTCAGTGCCTCGGCTGCCGCGGGCCAGAACTGCACATTCCACCTTCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp ACCCGGCACAAGCGCCCAAATCCCGATTTCGCCGCGAGCCCTCACTaGCGGGCAGCCGCAACATCCTTGCTCCGGTCCCCGCGAGCGCGG +
Preference number: 5 (lower is better)
Translates to: TRHKRPNPDFAASPH*RAAATSLLRSPRAR
Trigger: CCGCGCTCGCGGGGACCGGAGCAAGGATGTTGCGGCTGCCCGGCAGTGAGGGCTCGCGGCGAAATCGGGATTTGGGCGCTTGTGCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp TGGGCCGGACCTCTGCCAGGCAGACGGGCGGTTTGCCTGTCCAGCTaGCGTCGGCTTTGCAGGTACGGTGCTCGGAGCCACCCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: WAGPLPGRRAVCLSS*RRLCRYGARSHPGG
Trigger: CCCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGCAGAGGTCCGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221199.2
CDS GCA 90 bp CCTCCAGGCAGACGGGCGGTTTGCCTGTCCAGCTGCCGTCGGCTTTaGAGGTACGGTGCTCGGAGCCACCCCGGAGGGAGAAGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: PPGRRAVCLSSCRRL*RYGARSHPGGRSPP
Trigger: AGGAGGGCTTCTCCCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CTGCCAGGCAGACGGGCGGTTTGCCTGTCCAGCTGCCGTCGGCTTTaGAGGTACGGTGCTCGGAGCCACCCCGGAGGGAGAAGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: LPGRRAVCLSSCRRL*RYGARSHPGGRSPP
Trigger: AGGAGGGCTTCTCCCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGGCTCCCGGGCTGTGTaGATGGGTCTCCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGGSRAV*MGLPLG
Trigger: GCCCAGCGGGAGACCCATCAACACAGCCCGGGAGCC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp TATCGTGGGACGTGGAGAGCAGGGATCCAGGCAGCTCACTCCCGCTaGACCTTCCCATCATGCGGCTGGTCTCGGAGGGGCCGCTCCGGA +
Preference number: 5 (lower is better)
Translates to: YRGTWRAGIQAAHSR*TFPSCGWSRRGRSG
Trigger: TCCGGAGCGGCCCCTCCGAGACCAGCCGCATGATGGGAAGGTTCAGCGGGAGTGAGCTGCCTGGATCCCTGCTCTCCACGTCCCACGATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp TGGCCAAGGGCAGCGACTCTCCTGTGTGAGAGCCTGAGAGGGAGCTaGGGAGCCGGGAGTGCTGGCTGTAGCCGTCGTGTACCTCCACGA +
Preference number: 5 (lower is better)
Translates to: WPRAATLLCESLRGS*GAGSAGCSRRVPPR
Trigger: TCGTGGAGGTACACGACGGCTACAGCCAGCACTCCCGGCTCCTCAGCTCCCTCTCAGGCTCTCACACAGGAGAGTCGCTGCCCTTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp CGTGGGATCTATGCAGCTGGGCTGTGTGCCACTCCACGTCCCGTCTaGCTGGCAAAACCTCCGTGGGGAGCCCACCAGCACCAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: RGIYAAGLCATPRPV*LAKPPWGAHQHQRS
Trigger: GCTCCTCTGGTGCTGGTGGGCTCCCCACGGAGGTTTTGCCAGTCAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATAGATCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GCTCGGAGCCACCCCGGAGGGAGAAGCCCTCCTGGCAGGAGTAGATaGGTGTGTAACCCATGGATGGCAGGTCCAGGGCCCCGACATTGG +
Preference number: 5 (lower is better)
Translates to: ARSHPGGRSPPGRSR*VCNPWMAGPGPRHW
Trigger: CCAATGTCGGGGCCCTGGACCTGCCATCCATGGGTTACACACTCATCTACTCCTGCCAGGAGGGCTTCTCCCTCCGGGGTGGCTCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 90 bp AGCAGTGGGGGAGGGAGCCTGTCCAGTGTCCGTCCAGTCCACACATaGGGGTGGAGTTTCCCACCAGAGTCCGCTTGCCCGTGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SSGGGSLSSVRPVHT*GWSFPPESACPCSC
Trigger: ACAGCTGCACGGGCAAGCGGACTCTGGTGGGAAACTCCACCCGCATGTGTGGACTGGACGGACACTGGACAGGCTCCCTCCCCCACTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp ATGGGGAAGTTGGGGGACGTGATGATACCCGAGGGACCTCGGAGGTaGGCATCACACATGCGGGCTCGGCAGACCGGCCTGTGGTCACTC +
Preference number: 5 (lower is better)
Translates to: MGKLGDVMIPEGPRR*ASHMRARQTGLWSL
Trigger: GAGTGACCACAGGCCGGTCTGCCGAGCCCGCATGTGTGATGCCCACCTCCGAGGTCCCTCGGGTATCATCACGTCCCCCAACTTCCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GACTTGAGCGGTGAAGTTGCCATAGAGCCCGGCACTGATGGGGGCTaGCAGCCTCGAGCCGGTCAGTTGCCTCAGGGGCTGGGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: DLSGEVAIEPGTDGG*QPRAGQLPQGLGEA
Trigger: AGCTTCTCCCAGCCCCTGAGGCAACTGACCGGCTCGAGGCTGCCAGCCCCCATCAGTGCCGGGCTCTATGGCAACTTCACCGCTCAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GTGTTGCATCCGAAGTGGATGGAGCCGCCCGGCTGGGTGGTTGTCTaGCCCAGGATGAAGCCGTGGAGTGGAGCCTTAGGCAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VLHPKWMEPPGWVVV*PRMKPWSGALGRLQ
Trigger: CTGCAGCCTGCCTAAGGCTCCACTCCACGGCTTCATCCTGGGCCAGACAACCACCCAGCCGGGCGGCTCCATCCACTTCGGATGCAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GGGGGAGGGAGCCTGTCCAGTGTCCGTCCAGTCCACACATGCGGGTaGAGTTTCCCACCAGAGTCCGCTTGCCCGTGCAGCTGTAACGCA +
Preference number: 5 (lower is better)
Translates to: GGGSLSSVRPVHTCG*SFPPESACPCSCNA
Trigger: TGCGTTACAGCTGCACGGGCAAGCGGACTCTGGTGGGAAACTCCACCCGCATGTGTGGACTGGACGGACACTGGACAGGCTCCCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GGATCTATGCAGCTGGGCTGTGTGCCACTCCACGTCCCGTCTGACTaGCAAAACCTCCGTGGGGAGCCCACCAGCACCAGAGGAGCGTGG +
Preference number: 5 (lower is better)
Translates to: GSMQLGCVPLHVPSD*QNLRGEPTSTRGAW
Trigger: CCACGCTCCTCTGGTGCTGGTGGGCTCCCCACGGAGGTTTTGCCAGTCAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCCCGCTGGTGTGGACTaGCCGGACACTGTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEPAGVD*PDTVLL
Trigger: CAGGAGAACAGTGTCCGGCAAGTCCACACCAGCGGG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTTCCAGGGCCCCGACATaGGCGTGTGTGGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGSRAPT*ACVGVS
Trigger: AGAGACGCCCACACACGCCAATGTCGGGGCCCTGGA...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGAGGCAGACGGGCGGTTaGCCTGTCCAGCTGCCGTCG +
Preference number: 5 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQRQTGG*PVQLPS
Trigger: CGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCT...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp GGAGCCCACCAGCACCAGAGGAGCGTGGCAGGAGAAGGACACAGATaGCCTGTAGGAGAAACCTCGGTCCTCTCTCCTCCCTCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GAHQHQRSVAGEGHR*PVGETSVLSPPSRG
Trigger: CCCCCTCGAGGGAGGAGAGAGGACCGAGGTTTCTCCTACAGGTCATCTGTGTCCTTCTCCTGCCACGCTCCTCTGGTGCTGGTGGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp ACACGGCACCACACAGGTTGGTGCAGAGACATTCCACTGGGCCAGTaGCCCAGGTACAGGGAGGCACTCGATCTCTGGGGACCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TRHHTGWCRDIPLGQ*PRYREALDLWGPLQ
Trigger: CTGCAGGGGTCCCCAGAGATCGAGTGCCTCCCTGTACCTGGGGCACTGGCCCAGTGGAATGTCTCTGCACCAACCTGTGTGGTGCCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp GGCACCAGGATGGCGGCGGCCACTGAGCTGCTGTTGGAAGCAAAGTaGCGGCCGATGGACTCGGGATCTGACTCCAACAGCCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: GTRMAAATELLLEAK*RPMDSGSDSNSLRS
Trigger: TGACCTCAGGCTGTTGGAGTCAGATCCCGAGTCCATCGGCCGGCACTTTGCTTCCAACAGCAGCTCAGTGGCCGCCGCCATCCTGGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CCA 90 bp GGGATCCCTGGGTCACCACAAACTCCTGTGCTGGTTCCTGAGCAGTaGGGGAGGGAGCCTGTCCAGTGTCCGTCCAGTCCACACATGCGG +
Preference number: 5 (lower is better)
Translates to: GIPGSPQTPVLVPEQ*GREPVQCPSSPHMR
Trigger: CCGCATGTGTGGACTGGACGGACACTGGACAGGCTCCCTCCCCCACTGCTCAGGAACCAGCACAGGAGTTTGTGGTGACCCAGGGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGTGACCACTTCAGCATaGGGGAGGATGGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEVTTSA*GRMVGG
Trigger: TCCCCCGACCATCCTCCCCAATGCTGAAGTGGTCAC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCCACTCCAGAGTCCATaGGCCATGCACTCCCGCACC +
Preference number: 5 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGPLQSP*AMHSRT
Trigger: GGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTGG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCAGCTGCCGTCGGCTTaGCAGGTACGGTGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQQLPSA*QVRCSE
Trigger: CTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGCGTTGACCTTGCTGTaGGCTACCTGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEALTLL*ATWKPV
Trigger: CACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp TCTAGACGGGCCACATGGCCACTGCTGGTGATGGAGGAGGGGAGCTaGTTTCCCGAGAAGGTACCAAGGACCGGGGCTTCAGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SRRATWPLLVMEEGS*FPEKVPRTGASAVA
Trigger: AGCCACCGCTGAAGCCCCGGTCCTTGGTACCTTCTCGGGAAATCAGCTCCCCTCCTCCATCACCAGCAGTGGCCATGTGGCCCGTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GCCCAATGGTGCACCCGGCGTCTGCCTCGATGGTCCAGATGCAGTTaGGATTGTGTTCATAGGGAGCCGGGTACCCGGGCGACAGCACCT +
Preference number: 5 (lower is better)
Translates to: AQWCTRRLPRWSRCS*DCVHREPGTRATAP
Trigger: AGGTGCTGTCGCCCGGGTACCCGGCTCCCTATGAACACAATCTCAACTGCATCTGGACCATCGAGGCAGACGCCGGGTGCACCATTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp ATCACTCCACACTCAGGCTGCGACCCGCTCCAGGAGCCATTGGCTTaGCACATTCGCTCGGAAGATCCCCGGAGCACGTGGCCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: ITPHSGCDPLQEPLA*HIRSEDPRSTWPAS
Trigger: TGACGCTGGCCACGTGCTCCGGGGATCTTCCGAGCGAATGTGTCAAGCCAATGGCTCCTGGAGCGGGTCGCAGCCTGAGTGTGGAGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GGCGATGATGAGAGCGATGAAAGGCACCAGGATGGCGGCGGCCACTaGGCTGCTGTTGGAAGCAAAGTGCCGGCCGATGGACTCGGGATC +
Preference number: 5 (lower is better)
Translates to: GDDESDERHQDGGGH*AAVGSKVPADGLGI
Trigger: GATCCCGAGTCCATCGGCCGGCACTTTGCTTCCAACAGCAGCTCAGTGGCCGCCGCCATCCTGGTGCCTTTCATCGCTCTCATCATCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 90 bp TCTTGCCCGACCAGTGATGATCCTGCTGGCAGATGCGCACAGACATaGCGATCAGGCGGAAGCCAGCCCTGCACTGGTACACCACGCTGC +
Preference number: 5 (lower is better)
Translates to: SCPTSDDPAGRCAQT*RSGGSQPCTGTPRC
Trigger: GCAGCGTGGTGTACCAGTGCAGGGCTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGTCGGGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp ACGGTGGTGCCGAAGCTGAATCTGTGGGGCCCGCTGGTGTGGACTTaGCGGACACTGTTCTCCTGGTGCCCGGGATCCGTACAGTTGATG +
Preference number: 5 (lower is better)
Translates to: TVVPKLNLWGPLVWT*RTLFSWCPGSVQLM
Trigger: CATCAACTGTACGGATCCCGGGCACCAGGAGAACAGTGTCCGGCAAGTCCACACCAGCGGGCCCCACAGATTCAGCTTCGGCACCACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp TGTGAAGTGGAGCCGCAGCCAGTTCTTGCTGCTGATGACAGGGGCTaGGAGGCTGGCTCCGGTAAACCAGAGAGAGGAGCCTTCGGTCCC +
Preference number: 5 (lower is better)
Translates to: CEVEPQPVLAADDRG*EAGSGKPERGAFGP
Trigger: GGGACCGAAGGCTCCTCTCTCTGGTTTACCGGAGCCAGCCTCCCAGCCCCTGTCATCAGCAGCAAGAACTGGCTGCGGCTCCACTTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp TGGGCGCTGAAGCCTCGCTGCCGGTGGTTACCATCTGATGTGAAGTaGAGCCGCAGCCAGTTCTTGCTGCTGATGACAGGGGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: WALKPRCRWLPSDVK*SRSQFLLLMTGAGR
Trigger: CCTCCCAGCCCCTGTCATCAGCAGCAAGAACTGGCTGCGGCTCCACTTCACATCAGATGGTAACCACCGGCAGCGAGGCTTCAGCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CCCCACGGAGAAGTCACTGCCAAGCCTCTTGCCATAGCGAGGTTCTaGCACAGAGCTGCACTGTGTGGCGCTGGTTCGGGGTACCGCTTG +
Preference number: 5 (lower is better)
Translates to: PHGEVTAKPLAIARF*HRAALCGAGSGYRL
Trigger: CAAGCGGTACCCCGAACCAGCGCCACACAGTGCAGCTCTGTGCCAGAACCTCGCTATGGCAAGAGGCTTGGCAGTGACTTCTCCGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp TTGCCACCACACGGCACCACACAGGTTGGTGCAGAGACATTCCACTaGGCCAGTGCCCCAGGTACAGGGAGGCACTCGATCTCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: LPPHGTTQVGAETFH*ASAPGTGRHSISGD
Trigger: GTCCCCAGAGATCGAGTGCCTCCCTGTACCTGGGGCACTGGCCCAGTGGAATGTCTCTGCACCAACCTGTGTGGTGCCGTGTGGTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GGAGAAGCCCTCCTGGCAGGAGTAGATGAGTGTGTAACCCATGGATaGCAGGTCCAGGGCCCCGACATTGGCGTGTGTGGGCGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: GEALLAGVDECVTHG*QVQGPDIGVCGRLW
Trigger: CCAGAGACGCCCACACACGCCAATGTCGGGGCCCTGGACCTGCCATCCATGGGTTACACACTCATCTACTCCTGCCAGGAGGGCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGGTGCCACTGGAACCTaGAATGAAGCCACCGCAGAG +
Preference number: 5 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEGATGT*NEATAE
Trigger: CTCTGCGGTGGCTTCATTCAAGGTTCCAGTGGCACC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGCTGCGCTCAGTGAGGTaGCCACCACACGGCACCACA +
Preference number: 5 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQLRSVR*PPHGTT
Trigger: TGTGGTGCCGTGTGGTGGCAACCTCACTGAGCGCAG...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGTGGGTCTGGGCACTCTaGGAGTTCGTAGGCCTGGTA +
Preference number: 5 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEWVWAL*EFVGLV
Trigger: TACCAGGCCTACGAACTCCAAGAGTGCCCAGACCCA...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGTGTCCCGGTGGAACTaGAGCAGGACCTGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGVSRWN*SRTWLE
Trigger: CTCCAACCAGGTCCTGCTCAAGTTCCACCGGGACAC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCCTGTCCAGGTGCCATaGACAGAGCAGTGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGPVQVP*TEQCRL
Trigger: CAGCCGACACTGCTCTGTCAATGGCACCTGGACAGG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGGCTCCCGGGCTGTGTaGATGGGTCTCCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQGSRAV*MGLPLG
Trigger: GCCCAGCGGGAGACCCATCAACACAGCCCGGGAGCC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGAACTGCCCAAAGCCTaGGCCCTTGACGGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGELPKA*ALDGAL
Trigger: CAAGGCTCCGTCAAGGGCCAAGGCTTTGGGCAGTTC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGTGAACTCCGCCTCGTaGCTCATGATGTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEVNSAS*LMMSVG
Trigger: GCCCACAGACATCATGAGCAACGAGGCGGAGTTCAC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp CTCAGGGACAAGGTGCTGGCCGCACTGACTATGGTGGCTGGTAGCTaGAAGCCGGTGAGCCTTGTTCGAAGGTTCTCTGCCTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LRDKVLAALTMVAGS*KPVSLVRRFSAWGG
Trigger: CCCACCCCAGGCAGAGAACCTTCGAACAAGGCTCACCGGCTTTCAGCTACCAGCCACCATAGTCAGTGCGGCCAGCACCTTGTCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GGAAGAAGCCGGGGTTGCAGCTATAGCGGACCTTGTCGCCCAGGTTaGAGGTGGAGCCTTGCTGGATACCATTGGGCAGCCTCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: GRSRGCSYSGPCRPG*RWSLAGYHWAASLG
Trigger: ACCCAGGGAGGCTGCCCAATGGTATCCAGCAAGGCTCCACCTTCAACCTGGGCGACAAGGTCCGCTATAGCTGCAACCCCGGCTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp AGGTGCTGTGCAGGTCCTTGGGCAGCATTGGGCCACTCAGCTCCTTaGGGAGGACCCCACTTTCCACAGGTCCATCCCAGATGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: RCCAGPWAALGHSAP*GGPHFPQVHPRCAA
Trigger: TGCTGCGCATCTGGGATGGACCTGTGGAAAGTGGGGTCCTCCTCAAGGAGCTGAGTGGCCCAATGCTGCCCAAGGACCTGCACAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GGGTGGAGGCTCCTTCCACCTCATAGCCCCCGTGGCAGTAGTAGGTaGCAGAAGAACCAAGCTTCAGGTCGGAGCCCACTCGAGTGCCGT +
Preference number: 5 (lower is better)
Translates to: GWRLLPPHSPRGSSR*QKNQASGRSPLECR
Trigger: ACGGCACTCGAGTGGGCTCCGACCTGAAGCTTGGTTCTTCTGTCACCTACTACTGCCACGGGGGCTATGAGGTGGAAGGAGCCTCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp GTTAGGTCTCCCCCACAAGGAGCGATGCACGTGGGCGGGCTGGGCTaGCAGAAGAATCGGTTCTGGATCTTCACGCAGCTGATCTCTGCG +
Preference number: 5 (lower is better)
Translates to: VRSPPQGAMHVGGLG*QKNRFWIFTQLISA
Trigger: CGCAGAGATCAGCTGCGTGAAGATCCAGAACCGATTCTTCTGGCAGCCCAGCCCGCCCACGTGCATCGCTCCTTGTGGGGGAGACCTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CACAGAAAGGGGTCTTGCCCGACCAGTGATGATCCTGCTGGCAGATaGGCACAGACATGCCGATCAGGCGGAAGCCAGCCCTGCACTGGT +
Preference number: 5 (lower is better)
Translates to: HRKGSCPTSDDPAGR*AQTCRSGGSQPCTG
Trigger: ACCAGTGCAGGGCTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGTCGGGCAAGACCCCTTTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CTGTGGGGCCCGCTGGTGTGGACTTGCCGGACACTGTTCTCCTGGTaGCCGGGATCCGTACAGTTGATGATTCTGCAGGTAGGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LWGPLVWTCRTLFSW*PGSVQLMILQVGSV
Trigger: CACACTGCCTACCTGCAGAATCATCAACTGTACGGATCCCGGGCACCAGGAGAACAGTGTCCGGCAAGTCCACACCAGCGGGCCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp GTCCACACATGCGGGTGGAGTTTCCCACCAGAGTCCGCTTGCCCGTaGAGCTGTAACGCACAACGGCCCCCACTATGTAGCTGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VHTCGWSFPPESACP*SCNAQRPPLCSCLQ
Trigger: CTGGAGACAGCTACATAGTGGGGGCCGTTGTGCGTTACAGCTGCACGGGCAAGCGGACTCTGGTGGGAAACTCCACCCGCATGTGTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CGTCCAGTCCACACATGCGGGTGGAGTTTCCCACCAGAGTCCGCTTaGCCGTGCAGCTGTAACGCACAACGGCCCCCACTATGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: RPVHTCGWSFPPESA*PCSCNAQRPPLCSC
Trigger: ACAGCTACATAGTGGGGGCCGTTGTGCGTTACAGCTGCACGGGCAAGCGGACTCTGGTGGGAAACTCCACCCGCATGTGTGGACTGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp GATCTGCACATGTGGTCAGCGTGGGATCTATGCAGCTGGGCTGTGTaGCACTCCACGTCCCGTCTGACTGGCAAAACCTCCGTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: DLHMWSAWDLCSWAV*HSTSRLTGKTSVGS
Trigger: GCTCCCCACGGAGGTTTTGCCAGTCAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATAGATCCCACGCTGACCACATGTGCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GGCCGGTTCTGGGAATGGTCGCTGTGGAAGTACACGATGCTATCGTaGGACGTGGAGAGCAGGGATCCAGGCAGCTCACTCCCGCTGAAC +
Preference number: 5 (lower is better)
Translates to: GRFWEWSLWKYTMLS*DVESRDPGSSLPLN
Trigger: GTTCAGCGGGAGTGAGCTGCCTGGATCCCTGCTCTCCACGTCCCACGATAGCATCGTGTACTTCCACAGCGACCATTCCCAGAACCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp AGTGTCCAGCAAGGCAGCGGACTTCAGAGCCACTCCAGAGTCCATTaGCCATGCACTCCCGCACCCTGGAGCCCACCAGTGTATATCCGG +
Preference number: 5 (lower is better)
Translates to: SVQQGSGLQSHSRVH*PCTPAPWSPPVYIR
Trigger: CCGGATATACACTGGTGGGCTCCAGGGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTGGCTCTGAAGTCCGCTGCCTTGCTGGACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp ATGAGATCACTCCACACTCAGGCTGCGACCCGCTCCAGGAGCCATTaGCTTGACACATTCGCTCGGAAGATCCCCGGAGCACGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: MRSLHTQAATRSRSH*LDTFARKIPGARGQ
Trigger: CTGGCCACGTGCTCCGGGGATCTTCCGAGCGAATGTGTCAAGCCAATGGCTCCTGGAGCGGGTCGCAGCCTGAGTGTGGAGTGATCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp TGTAACCCATGGATGGCAGGTCCAGGGCCCCGACATTGGCGTGTGTaGGCGTCTCTGGTTGTTTGCAGTGGTGGGGGACACAGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: CNPWMAGPGPRHWRV*ASLVVCSGGGHSQV
Trigger: CACCTGACTGTGTCCCCCACCACTGCAAACAACCAGAGACGCCCACACACGCCAATGTCGGGGCCCTGGACCTGCCATCCATGGGTTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGTGAACTCCGCCTCGTaGCTCATGATGTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGVNSAS*LMMSVG
Trigger: GCCCACAGACATCATGAGCAACGAGGCGGAGTTCAC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp GCACGGCACTGTTCCACACCACGCTGCCCTCCTTCAGAACACAGGTaGTGGTCTCAGAGCCCTGCGTCCCGAGGAAGCCTTCATCACACA +
Preference number: 5 (lower is better)
Translates to: ARHCSTPRCPPSEHR*WSQSPASRGSLHHT
Trigger: TGTGTGATGAAGGCTTCCTCGGGACGCAGGGCTCTGAGACCATCACCTGTGTTCTGAAGGAGGGCAGCGTGGTGTGGAACAGTGCCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp ATTGTGTTCATAGGGAGCCGGGTACCCGGGCGACAGCACCTGCCCTaGCACCTCTCCTCTTACTGTCCCTCCACACTCAGCGACACAGGT +
Preference number: 5 (lower is better)
Translates to: IVFIGSRVPGRQHLP*HLSSYCPSTLSDTG
Trigger: ACCTGTGTCGCTGAGTGTGGAGGGACAGTAAGAGGAGAGGTGTCAGGGCAGGTGCTGTCGCCCGGGTACCCGGCTCCCTATGAACACAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GCCGGGAGTGCTGGCTGTAGCCGTCGTGTACCTCCACGATGTCATTaGGGGCCGTGTGGAAGAAGGCAAACTGGCCGAACACCACGTAGT +
Preference number: 5 (lower is better)
Translates to: AGSAGCSRRVPPRCH*GPCGRRQTGRTPRS
Trigger: ACTACGTGGTGTTCGGCCAGTTTGCCTTCTTCCACACGGCCCTCAATGACATCGTGGAGGTACACGACGGCTACAGCCAGCACTCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GGTAGAAGCCGTGGTTGCACTGGTAGGAAACGGTGGTGCCGAAGCTaGATCTGTGGGGCCCGCTGGTGTGGACTTGCCGGACACTGTTCT +
Preference number: 5 (lower is better)
Translates to: GRSRGCTGRKRWCRS*ICGARWCGLAGHCS
Trigger: AGAACAGTGTCCGGCAAGTCCACACCAGCGGGCCCCACAGATTCAGCTTCGGCACCACCGTTTCCTACCAGTGCAACCACGGCTTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CAGCAAGGCAGCGGACTTCAGAGCCACTCCAGAGTCCATTGGCCATaGACTCCCGCACCCTGGAGCCCACCAGTGTATATCCGGAATTGC +
Preference number: 5 (lower is better)
Translates to: QQGSGLQSHSRVHWP*TPAPWSPPVYIRNC
Trigger: GCAATTCCGGATATACACTGGTGGGCTCCAGGGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTGGCTCTGAAGTCCGCTGCCTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp ACTGCGGCATGCCAGGATCTGCACATGTGGTCAGCGTGGGATCTATaGAGCTGGGCTGTGTGCCACTCCACGTCCCGTCTGACTGGCAAA +
Preference number: 5 (lower is better)
Translates to: TAACQDLHMWSAWDL*SWAVCHSTSRLTGK
Trigger: TTTGCCAGTCAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATAGATCCCACGCTGACCACATGTGCAGATCCTGGCATGCCGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CAAGCCTCTTGCCATAGCGAGGTTCTGGCACAGAGCTGCACTGTGTaGCGCTGGTTCGGGGTACCGCTTGGTAGACAAAGTGGAACCCCC +
Preference number: 5 (lower is better)
Translates to: QASCHSEVLAQSCTV*RWFGVPLGRQSGTP
Trigger: GGGGGTTCCACTTTGTCTACCAAGCGGTACCCCGAACCAGCGCCACACAGTGCAGCTCTGTGCCAGAACCTCGCTATGGCAAGAGGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GGACATTGCTGTTGCTCCACAGGCCAGTATCCAGACACTCTGCGGTaGCCTCGGCACCCGCCTGGAGATGGTAGCCTTCATTGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GHCCCSTGQYPDTLR*PRHPPGDGSLHCSC
Trigger: ACAGCTGCAATGAAGGCTACCATCTCCAGGCGGGTGCCGAGGCCACCGCAGAGTGTCTGGATACTGGCCTGTGGAGCAACAGCAATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CGCATTACACTGCCTGGGGCAAAGCTGTCTCCTAGGCGGATGCCATaGGCTGGGATCCCTGGGTCACCACAAACTCCTGTGCTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: RITLPGAKLSPRRMP*AGIPGSPQTPVLVP
Trigger: AGGAACCAGCACAGGAGTTTGTGGTGACCCAGGGATCCCAGCCCATGGCATCCGCCTAGGAGACAGCTTTGCCCCAGGCAGTGTAATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GCATGCCAGGATCTGCACATGTGGTCAGCGTGGGATCTATGCAGCTaGGCTGTGTGCCACTCCACGTCCCGTCTGACTGGCAAAACCTCC +
Preference number: 5 (lower is better)
Translates to: ACQDLHMWSAWDLCS*AVCHSTSRLTGKTS
Trigger: GGAGGTTTTGCCAGTCAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATAGATCCCACGCTGACCACATGTGCAGATCCTGGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCGTTGAAGGTGGAGCCTaGCTGGATACCATTGGGCAG +
Preference number: 5 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGVEGGA*LDTIGQ
Trigger: CTGCCCAATGGTATCCAGCAAGGCTCCACCTTCAAC...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGATCACCTTGGCAGGGTaGAGTGCAGTGATGATCCAC +
Preference number: 5 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEITLAG*SAVMIH
Trigger: GTGGATCATCACTGCACTCAACCCTGCCAAGGTGAT...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCACCTCCACGATGTCATaGAGGGCCGTGTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGTSTMS*RAVWKK
Trigger: CTTCTTCCACACGGCCCTCAATGACATCGTGGAGGT...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGCAGCGGATGACCCTTaGGCCCGTGTAGTAGTAGCC +
Preference number: 5 (lower is better)
Translates to: CYRCANGATPAARWLLHAAADDP*ARVVVA
Trigger: GGCTACTACTACACGGGCCAAAGGGTCATCCGCTGC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCAGCTGCCGTCGGCTTaGCAGGTACGGTGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWQLPSA*QVRCSE
Trigger: CTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAAGGCAGACGGGCGGTTaGCCTGTCCAGCTGCCGTCG +
Preference number: 5 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLRQTGG*PVQLPS
Trigger: CGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCT...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGAACTGCCCAAAGCCTaGGCCCTTGACGGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: CYRCANGATPAARWLLHAELPKA*ALDGAL
Trigger: CAAGGCTCCGTCAAGGGCCAAGGCTTTGGGCAGTTC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTTCTGTGGGCTGGATGTaGCGGTCATACATGGGGTTC +
Preference number: 5 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGSVGWM*RSYMGF
Trigger: GAACCCCATGTATGACCGCAACATCCAGCCCACAGA...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp GACTTGGTACTGGGCGCTGAAGCCTCGCTGCCGGTGGTTACCATCTaGTGTGAAGTGGAGCCGCAGCCAGTTCTTGCTGCTGATGACAGG +
Preference number: 5 (lower is better)
Translates to: DLVLGAEASLPVVTI*CEVEPQPVLAADDR
Trigger: CCTGTCATCAGCAGCAAGAACTGGCTGCGGCTCCACTTCACATCAGATGGTAACCACCGGCAGCGAGGCTTCAGCGCCCAGTACCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp AGTCAGGGAACCCTGGTGACAAGATGGTGCCACTGGAACCTTGAATaGAGCCACCGCAGAGAGCTTCACAGCTGGGCAGGGCGTGACTCC +
Preference number: 5 (lower is better)
Translates to: SQGTLVTRWCHWNLE*SHRRELHSWAGRDS
Trigger: GGAGTCACGCCCTGCCCAGCTGTGAAGCTCTCTGCGGTGGCTTCATTCAAGGTTCCAGTGGCACCATCTTGTCACCAGGGTTCCCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp ACTCGGAAGAACTTCATAGCTGGCACGGAAGCCCTGGGCACTGACTaGATAGTCGCTGATGAGGCTCAGGGACAAGGTGCTGGCCGCACT +
Preference number: 5 (lower is better)
Translates to: TRKNFIAGTEALGTD*IVADEAQGQGAGRT
Trigger: AGTGCGGCCAGCACCTTGTCCCTGAGCCTCATCAGCGACTATGCAGTCAGTGCCCAGGGCTTCCGTGCCAGCTATGAAGTTCTTCCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp ACCACGCTGCCCTCCTTCAGAACACAGGTGATGGTCTCAGAGCCCTaGGTCCCGAGGAAGCCTTCATCACACAGGAAGGAGATGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TTLPSFRTQVMVSEP*VPRKPSSHRKEMEL
Trigger: CAGCTCCATCTCCTTCCTGTGTGATGAAGGCTTCCTCGGGACGCAGGGCTCTGAGACCATCACCTGTGTTCTGAAGGAGGGCAGCGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp AGCTGTCACCACTCCGACTCCCATTCTGCGGGACTCCCGGGTCATTaGAGGAGGTTGCGGTGGACACTGAGAACTGGATGGCAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: SCHHSDSHSAGLPGH*RRLRWTLRTGWQSL
Trigger: AAGGCTTTGCCATCCAGTTCTCAGTGTCCACCGCAACCTCCTGCAATGACCCGGGAGTCCCGCAGAATGGGAGTCGGAGTGGTGACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp TGCTCACAGATGCGTCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTaGTGCTTTCAATGCGGCTGGGGAGCTGTGAGCCATAGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: CSQMRRCGRRGRGCC*CFQCGWGAVSHRSF
Trigger: GAAGCTTCTATGGCTCACAGCTCCCCAGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGACGCATCTGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CATTGCTCACAGATGCGTCGCTGCGGAAGGCGAGGAAGAGGCTGTTaGTGCTGCTTTCAATGCGGCTGGGGAGCTGTGAGCCATAGAAGC +
Preference number: 5 (lower is better)
Translates to: HCSQMRRCGRRGRGC*CCFQCGWGAVSHRS
Trigger: GCTTCTATGGCTCACAGCTCCCCAGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGACGCATCTGTGAGCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GATCTTCACGCAGCTGATCTCTGCGCTCCCCTGCAGAGCATAGCCTaGGTCACACTGGAACACTGTGCTATCACCGGCTTCCCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: DLHAADLCAPLQSIA*VTLEHCAITGFPAV
Trigger: GACAGCTGGGAAGCCGGTGATAGCACAGTGTTCCAGTGTGACCCAGGCTATGCTCTGCAGGGGAGCGCAGAGATCAGCTGCGTGAAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp AATCTGTGGGGCCCGCTGGTGTGGACTTGCCGGACACTGTTCTCCTaGTGCCCGGGATCCGTACAGTTGATGATTCTGCAGGTAGGCAGT +
Preference number: 5 (lower is better)
Translates to: NLWGPLVWTCRTLFS*CPGSVQLMILQVGS
Trigger: ACTGCCTACCTGCAGAATCATCAACTGTACGGATCCCGGGCACCAGGAGAACAGTGTCCGGCAAGTCCACACCAGCGGGCCCCACAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GTATTCCAAACTGCGGCATGCCAGGATCTGCACATGTGGTCAGCGTaGGATCTATGCAGCTGGGCTGTGTGCCACTCCACGTCCCGTCTG +
Preference number: 5 (lower is better)
Translates to: VFQTAACQDLHMWSA*DLCSWAVCHSTSRL
Trigger: CAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATAGATCCCACGCTGACCACATGTGCAGATCCTGGCATGCCGCAGTTTGGAATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CCACTGTGGTCGATCATGGTGGCGTTGACCTTGCTGTTGGCTACCTaGAAGCCGGTGACTCTAAGCATGGCTGGCTGCTTCTTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: PLWSIMVALTLLLAT*KPVTLSMAGCFFPW
Trigger: CCAGGGGAAGAAGCAGCCAGCCATGCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCATGATCGACCACAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGGTGGTAAAGGTGATGTaGAAACCCCTCTTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: GAARSSAVVAGCWKPRGEVVKVM*KPLFPV
Trigger: CACAGGGAAGAGGGGTTTCAACATCACCTTTACCAC...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGGACTCCACTGGAAATTaGGCTCACACTCCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQDSTGN*AHTPGA
Trigger: AGCCCCTGGAGTGTGAGCCAAATTTCCAGTGGAGTC...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTACCTCGAGCCGGTCAGTaGCCTCAGGGGCTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLPRAGQ*PQGLGE
Trigger: TTCTCCCAGCCCCTGAGGCAACTGACCGGCTCGAGG...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCGCAGGTACACAGAGTaGCTTGAGCTGGTGACAATC +
Preference number: 5 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGRRYTE*LELVTI
Trigger: GATTGTCACCAGCTCAAGCAACTCTGTGTACCTGCG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTACCACAGGAAAGAGCTaGACAGAGAGGAATGGCCTC +
Preference number: 5 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGTTGKS*TERNGL
Trigger: GAGGCCATTCCTCTCTGTCAAGCTCTTTCCTGTGGT...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGCTGTCTCCAGACATTaGGGCATGAGGTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: CYRCANGATPAARWLLHAAVSRH*GMRWRA
Trigger: GGCTCTCCACCTCATGCCCAAATGTCTGGAGACAGC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTCGATCATGGTGGCGTaGACCTTGCTGTTGGCTACC +
Preference number: 5 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQSIMVA*TLLLAT
Trigger: GGTAGCCAACAGCAAGGTCAACGCCACCATGATCGA...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp AGTTCACAGGAAAGTTGGGGGACAGCAAAGTGCCCTGAGTGCCTGTaGCTGAGTTCCCACACTCCGCAACACACCTTGGCAGAGGCGAGC +
Preference number: 5 (lower is better)
Translates to: SSQESWGTAKCPECL*LSSHTPQHTLAEAS
Trigger: GCTCGCCTCTGCCAAGGTGTGTTGCGGAGTGTGGGAACTCAGTCACAGGCACTCAGGGCACTTTGCTGTCCCCCAACTTTCCTGTGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp ACTCCTTGCCTGGTGGGTAGGGTTCTGGGTAGTTTGGTGACAGAATaGCTCCTGATGGCCCGGTTAGGTCTCCCCCACAAGGAGCGATGC +
Preference number: 5 (lower is better)
Translates to: TPCLVGRVLGSLVTE*LLMARLGLPHKERC
Trigger: GCATCGCTCCTTGTGGGGGAGACCTAACCGGGCCATCAGGAGTCATTCTGTCACCAAACTACCCAGAACCCTACCCACCAGGCAAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp TCACAGATGCGTCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTGCTaGTTTCAATGCGGCTGGGGAGCTGTGAGCCATAGAAGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: SQMRRCGRRGRGCCC*FQCGWGAVSHRSFL
Trigger: TAGGAAGCTTCTATGGCTCACAGCTCCCCAGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGACGCATCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CGGAGGGGCCGCTCCGGATTTCTAAGAAGTCGTGGTTGGGCTCCGTaGAGAAGTTCAAAAACTGGATGTGAGCACCAAAGCCCACGGGCA +
Preference number: 5 (lower is better)
Translates to: RRGRSGFLRSRGWAP*RSSKTGCEHQSPRA
Trigger: TGCCCGTGGGCTTTGGTGCTCACATCCAGTTTTTGAACTTCTCCACGGAGCCCAACCACGACTTCTTAGAAATCCGGAGCGGCCCCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CTTCAGAGCCACTCCAGAGTCCATTGGCCATGCACTCCCGCACCCTaGAGCCCACCAGTGTATATCCGGAATTGCAGGAGAAGATGGCAG +
Preference number: 5 (lower is better)
Translates to: LQSHSRVHWPCTPAP*SPPVYIRNCRRRWQ
Trigger: CTGCCATCTTCTCCTGCAATTCCGGATATACACTGGTGGGCTCCAGGGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTGGCTCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGACCTTGTCGCCCAGGTaGAAGGTGGAGCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWTLSPR*KVEPCW
Trigger: CCAGCAAGGCTCCACCTTCAACCTGGGCGACAAGGT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp AGCACCAATTCAGGAGGCTGGGGCACTGGGTGCTTCATCTGGTGCTGCCCAGGCTCTTCAAAGGCCAGTTaGATCACCTTGGCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: STNSGGWGTGCFIWCCPGSSKAS*ITLAGL
Trigger: CAACCCTGCCAAGGTGATCAAACTGGCCTTTGAAGA...GCCTGGGCAGCACCAGATGAAGCACCCAGTGCCCCAGCCTCCTGAATTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAGGCGAGCTGTCGAATGTAATTTaGATGGGGTATCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GAARSSAVVAGCWKPRGELSNVI*MGYPGW
Trigger: CCAGCCTGGATACCCCATCAAAATTACATTCGACAG...CTCGCCTCTTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGACTCCGCAACACACCTaGGCAGAGGCGAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWTPQHT*AEASST
Trigger: TGTGGAGCTCGCCTCTGCCAAGGTGTGTTGCGGAGT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTGTGCTGTGCAGGTCCTaGGGCAGCATTGGGCCACTC +
Preference number: 5 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPVLCRS*GSIGPL
Trigger: GAGTGGCCCAATGCTGCCCAAGGACCTGCACAGCAC...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGTGCAGGACGACCGAGTaGAAGGTGCTGTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWCRTTE*KVLCRS
Trigger: GGACCTGCACAGCACCTTCAACTCGGTCGTCCTGCA...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGGCCTGGTACTCCAGCTaGAATCCTGGCCGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWAWYSS*NPGRFW
Trigger: CCAGAACCGGCCAGGATTCAAGCTGGAGTACCAGGC...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTCCGGGATCCGTACAGTaGATGATTCTGCAGGTAGGC +
Preference number: 5 (lower is better)
Translates to: CYRCANGATPAARWLLHAPGSVQ*MILQVG
Trigger: GCCTACCTGCAGAATCATCAACTGTACGGATCCCGG...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTCCACTCGGGCATTGCTaGGAGTTCCGGGGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPPLGHC*EFRGSH
Trigger: GTGGGAACCCCGGAACTCCAAGCAATGCCCGAGTGG...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAATTCCAGGTCCGGTCCTaGGTGCAGCTCAGCACAGAC +
Preference number: 5 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQFQVRS*VQLSTD
Trigger: GTCTGTGCTGAGCTGCACCAAGGACCGGACCTGGAA...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GTGGCTGCCACCTTTTGGGAGCCAGGGCTGGTTTGCTCCTGTCCTCTCCAGGGTCCATTGAATGGGACTTaGGGTCTTCTCCTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: VAATFWEPGLVCSCPLQGPLNGT*GLLLCL
Trigger: CAAGCACAGGAGAAGACCCAAAGTCCCATTCAATGG...ACCCTGGAGAGGACAGGAGCAAACCAGCCCTGGCTCCCAAAAGGTGGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp GAGGAAGAGGCTGTTGCTGCTGCTTTCAATGCGGCTGGGGAGCTGTaGGCCATAGAAGCTTCCTATGAGAGGGCTCAGAGAGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: EEEAVAAAFNAAGEL*AIEASYERAQRVPS
Trigger: GGAAGGGACTCTCTGAGCCCTCTCATAGGAAGCTTCTATGGCTCACAGCTCCCCAGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp CACGACACTCATAGACAACGGAACTGGAGAACACCAGGCCATCGCTaGACACCACTCGGGCATTGCTTGGAGTTCCGGGGTTCCCACATG +
Preference number: 5 (lower is better)
Translates to: HDTHRQRNWRTPGHR*TPLGHCLEFRGSHM
Trigger: CATGTGGGAACCCCGGAACTCCAAGCAATGCCCGAGTGGTGTTCAGCGATGGCCTGGTGTTCTCCAGTTCCGTTGTCTATGAGTGTCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp AGCTCAATCTGCTTCTTGACTTGGTACTGGGCGCTGAAGCCTCGCTaGCGGTGGTTACCATCTGATGTGAAGTGGAGCCGCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SSICFLTWYWALKPR*RWLPSDVKWSRSQF
Trigger: GAACTGGCTGCGGCTCCACTTCACATCAGATGGTAACCACCGGCAGCGAGGCTTCAGCGCCCAGTACCAAGTCAAGAAGCAGATTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CAGGTTGAAGGTGGAGCCTTGCTGGATACCATTGGGCAGCCTCCCTaGGTTCCCACAAGTGTGACTCGGAAGAACTTCATAGCTGGCACG +
Preference number: 5 (lower is better)
Translates to: QVEGGALLDTIGQPP*VPTSVTRKNFIAGT
Trigger: CGTGCCAGCTATGAAGTTCTTCCGAGTCACACTTGTGGGAACCCAGGGAGGCTGCCCAATGGTATCCAGCAAGGCTCCACCTTCAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp ATCTGCTTCTTGACTTGGTACTGGGCGCTGAAGCCTCGCTGCCGGTaGTTACCATCTGATGTGAAGTGGAGCCGCAGCCAGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ICFLTWYWALKPRCR*LPSDVKWSRSQFLL
Trigger: CAGCAAGAACTGGCTGCGGCTCCACTTCACATCAGATGGTAACCACCGGCAGCGAGGCTTCAGCGCCCAGTACCAAGTCAAGAAGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GGCTGGTCTCGGAGGGGCCGCTCCGGATTTCTAAGAAGTCGTGGTTaGGCTCCGTGGAGAAGTTCAAAAACTGGATGTGAGCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: GWSRRGRSGFLRSRG*APWRSSKTGCEHQS
Trigger: GCTTTGGTGCTCACATCCAGTTTTTGAACTTCTCCACGGAGCCCAACCACGACTTCTTAGAAATCCGGAGCGGCCCCTCCGAGACCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp TGGTACTCCAGCTTGAATCCTGGCCGGTTCTGGGAATGGTCGCTGTaGAAGTACACGATGCTATCGTGGGACGTGGAGAGCAGGGATCCA +
Preference number: 5 (lower is better)
Translates to: WYSSLNPGRFWEWSL*KYTMLSWDVESRDP
Trigger: TGGATCCCTGCTCTCCACGTCCCACGATAGCATCGTGTACTTCCACAGCGACCATTCCCAGAACCGGCCAGGATTCAAGCTGGAGTACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp ATAGCCAGCTCCCCTCACGATGCCATTGGCAAAAGGCTCTGGGTCTaGGCACTCTTGGAGTTCGTAGGCCTGGTACTCCAGCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: IASSPHDAIGKRLWV*ALLEFVGLVLQLES
Trigger: GGATTCAAGCTGGAGTACCAGGCCTACGAACTCCAAGAGTGCCCAGACCCAGAGCCTTTTGCCAATGGCATCGTGAGGGGAGCTGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GGACAAACTCCGGGTGAAGACCCCAAGCTGCAGAGATGTCTGCTGTaGCCCATCCCAGACAGTGATGTAGTCTCCGAAGGGCTCTATCTG +
Preference number: 5 (lower is better)
Translates to: GQTPGEDPKLQRCLL*PIPDSDVVSEGLYL
Trigger: CAGATAGAGCCCTTCGGAGACTACATCACTGTCTGGGATGGGCCACAGCAGACATCTCTGCAGCTTGGGGTCTTCACCCGGAGTTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp ACTGGCCAGGCACTGGGACCTCGCAGCCCCCTCAGCTATGTATCCTaGGTTGCAAATGAACTTGACCACGTCGTTGAGGTTGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: TGQALGPRSPLSYVS*VANELDHVVEVELA
Trigger: AGCCAGTTCAACCTCAACGACGTGGTCAAGTTCATTTGCAACCCAGGATACATAGCTGAGGGGGCTGCGAGGTCCCAGTGCCTGGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CAGGTGGGGTTCCACTCCAGGTCAGGTTGGGAAGGCAGGTCCTGGTaGTGGATCCCTGAAGCAGGTAACCTTTCTGACAACGGAATAGCA +
Preference number: 5 (lower is better)
Translates to: QVGFHSRSGWEGRSW*WIPEAGNLSDNGIA
Trigger: TGCTATTCCGTTGTCAGAAAGGTTACCTGCTTCAGGGATCCACCACCAGGACCTGCCTTCCCAACCTGACCTGGAGTGGAACCCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GTGCTGACTGTGAACTCCGCCTCGTTGCTCATGATGTCTGTGGGCTaGATGTTGCGGTCATACATGGGGTTCTCAAATGTGGCCCGCACG +
Preference number: 5 (lower is better)
Translates to: VLTVNSASLLMMSVG*MLRSYMGFSNVART
Trigger: CGTGCGGGCCACATTTGAGAACCCCATGTATGACCGCAACATCCAGCCCACAGACATCATGAGCAACGAGGCGGAGTTCACAGTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGACACAGTTGAGGCTGTaGAGATATGGCTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQTQLRL*RYGSGK
Trigger: CTTCCCAGAGCCATATCTCAACAGCCTCAACTGTGT...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGAGGCTCCACCTCCCGTaGGCCTGGCAGCGGATGACC +
Preference number: 5 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGRLHLP*AWQRMT
Trigger: GGTCATCCGCTGCCAGGCCAACGGGAGGTGGAGCCT...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGAGGCCGTTGACTGGATaGCCTGGGTGTCCACAGGTA +
Preference number: 5 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWRPLTG*PGCPQV
Trigger: TACCTGTGGACACCCAGGCAATCCAGTCAACGGCCT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGTGTGGGCGTCTCTGGTaGTTTGCAGTGGTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLCGRLW*FAVVGD
Trigger: GTCCCCCACCACTGCAAACAACCAGAGACGCCCACA...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGCGTTGACCTTGCTGTaGGCTACCTGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSALTLL*ATWKPV
Trigger: CACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp ACATCAGTTCCTCACTGCCCCGAAGACTGTAGCCAGGGTCACAGCTaGAGGTCACCGAGCTCCCTGCAAAATGACCTCCATCGTGAACCT +
Preference number: 5 (lower is better)
Translates to: TSVPHCPEDCSQGHS*RSPSSLQNDLHREP
Trigger: AGGTTCACGATGGAGGTCATTTTGCAGGGAGCTCGGTGACCTTCAGCTGTGACCCTGGCTACAGTCTTCGGGGCAGTGAGGAACTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp CCCCACGTGAAGTCAGACCCCACCACTTTCCCATTCGGGATGAGCTaGGGAGGTTTGCACATGATAGCTTTGCAAACCGGCTTGGTACCG +
Preference number: 5 (lower is better)
Translates to: PHVKSDPTTFPFGMS*GGLHMIALQTGLVP
Trigger: CGGTACCAAGCCGGTTTGCAAAGCTATCATGTGCAAACCTCCTCAGCTCATCCCGAATGGGAAAGTGGTGGGGTCTGACTTCACGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp AGTGCCGTCATAGACCTTGAGGAGGTCTCCTTCAGCGAGCTCAAATaGCTTGGCTTTAAGCTGAATCCCCTTCCCCGGCTGGGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: SAVIDLEEVSFSELK*LGFKLNPLPRLGLD
Trigger: ATCCAGACCCAGCCGGGGAAGGGGATTCAGCTTAAAGCCAAGGCATTTGAGCTCGCTGAAGGAGACCTCCTCAAGGTCTATGACGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp AGGACCCCACTTTCCACAGGTCCATCCCAGATGCGCAGCACATCGTaGACTTCTTCTGTGTCAAACACCAGGAAGTGGAGCCCAATGGTG +
Preference number: 5 (lower is better)
Translates to: RTPLSTGPSQMRSTS*TSSVSNTRKWSPMV
Trigger: CACCATTGGGCTCCACTTCCTGGTGTTTGACACAGAAGAAGTCCACGATGTGCTGCGCATCTGGGATGGACCTGTGGAAAGTGGGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CCACGTCGTTCACCAAATAGCGCTCTCCTGTCTTCACCCCATTGCTaGGTACAGCTGGTTCGGGACAACTGCTCAAGCCCACGGTCTTAT +
Preference number: 5 (lower is better)
Translates to: PRRSPNSALLSSPHC*VQLVRDNCSSPRSY
Trigger: ATAAGACCGTGGGCTTGAGCAGTTGTCCCGAACCAGCTGTACCCAGCAATGGGGTGAAGACAGGAGAGCGCTATTTGGTGAACGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp TGGGCACTCTTGGAGTTCGTAGGCCTGGTACTCCAGCTTGAATCCTaGCCGGTTCTGGGAATGGTCGCTGTGGAAGTACACGATGCTATC +
Preference number: 5 (lower is better)
Translates to: WALLEFVGLVLQLES*PVLGMVAVEVHDAI
Trigger: GATAGCATCGTGTACTTCCACAGCGACCATTCCCAGAACCGGCCAGGATTCAAGCTGGAGTACCAGGCCTACGAACTCCAAGAGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp AGTCAGGTGGGGTTCCACTCCAGGTCAGGTTGGGAAGGCAGGTCCTaGTGGTGGATCCCTGAAGCAGGTAACCTTTCTGACAACGGAATA +
Preference number: 5 (lower is better)
Translates to: SQVGFHSRSGWEGRS*WWIPEAGNLSDNGI
Trigger: TATTCCGTTGTCAGAAAGGTTACCTGCTTCAGGGATCCACCACCAGGACCTGCCTTCCCAACCTGACCTGGAGTGGAACCCCACCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GACCTTGCTGTTGGCTACCTGGAAGCCGGTGACTCTAAGCATGGCTaGCTGCTTCTTCCCCTGGTATTCATAGGCCCCTTTCCACAAGGA +
Preference number: 5 (lower is better)
Translates to: DLAVGYLEAGDSKHG*LLLPLVFIGPFPQG
Trigger: TCCTTGTGGAAAGGGGCCTATGAATACCAGGGGAAGAAGCAGCCAGCCATGCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTGATGTCTTCTGGTTATaGTCCTTGCTGGGCATCAGC +
Preference number: 5 (lower is better)
Translates to: CYRCANGATPAARWLLHADVFWL*SLLGIS
Trigger: GCTGATGCCCAGCAAGGACAATAACCAGAAGACATC...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTTCCACGTCGATGTCATaGAAGGCCAGGTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPSTSMS*KARWMR
Trigger: CCGCATCCACCTGGCCTTCAATGACATCGACGTGGA...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCAATGCGGTGCCCACTaGGGGGTGTGGGGAGCTCTC +
Preference number: 5 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGQCGAH*GVWGAL
Trigger: GAGAGCTCCCCACACCCCCAAGTGGGCACCGCATTG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGTCCAGGGCCCCGACATaGGCGTGTGTGGGCGTCTCT +
Preference number: 5 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGSRAPT*ACVGVS
Trigger: AGAGACGCCCACACACGCCAATGTCGGGGCCCTGGA...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCGTGACCTGGTAGACTaGAAGCAGGAGGCGGAAATC +
Preference number: 5 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWRDLVD*KQEAEI
Trigger: GATTTCCGCCTCCTGCTTCAAGTCTACCAGGTCACG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAATGTGGCCCGCACGTTaGTGTTCTCGTGGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLMWPAR*CSRGQH
Trigger: ATGCTGGCCACGAGAACACAAACGTGCGGGCCACAT...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAATCTGTGGGCTGGATGTaGCGGTCATACATGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQSVGWM*RSYMGF
Trigger: GAACCCCATGTATGACCGCAACATCCAGCCCACAGA...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp AGGCTGGCCGGTCAGTTGATATCCTGGAAGGCACTCGAAGGTCACTaGTTGTCCAACATTATAGCCAGCTCCCCTCACGATGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: RLAGQLISWKALEGH*LSNIIASSPHDAIG
Trigger: GCCAATGGCATCGTGAGGGGAGCTGGCTATAATGTTGGACAATCAGTGACCTTCGAGTGCCTTCCAGGATATCAACTGACCGGCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GATGAAGCCGTGGAGTGGAGCCTTAGGCAGGCTGCAGTAGGGGGCTaGATACCGAATCTTAAAACCCTTCCGGTTATAGGCGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: DEAVEWSLRQAAVGG*IPNLKTLPVIGVVR
Trigger: TCTGACCACGCCTATAACCGGAAGGGTTTTAAGATTCGGTATTCAGCCCCCTACTGCAGCCTGCCTAAGGCTCCACTCCACGGCTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GTTCCAGGTCCGGTCCTTGGTGCAGCTCAGCACAGACACTCTGTGTaGTTCCATCACATAGCCGGGGACACACTGGTATGTCACAGTCTT +
Preference number: 5 (lower is better)
Translates to: VPGPVLGAAQHRHSV*FHHIAGDTLVCHSL
Trigger: AAGACTGTGACATACCAGTGTGTCCCCGGCTATGTGATGGAATCACACAGAGTGTCTGTGCTGAGCTGCACCAAGGACCGGACCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CAACCTGATAGCCTTGGGAGCTGTTCTGTATTCCAAACTGCGGCATaGCAGGATCTGCACATGTGGTCAGCGTGGGATCTATGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QPDSLGSCSVFQTAA*QDLHMWSAWDLCSW
Trigger: CCAGCTGCATAGATCCCACGCTGACCACATGTGCAGATCCTGGCATGCCGCAGTTTGGAATACAGAACAGCTCCCAAGGCTATCAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp GCTCCCTGCAAAATGACCTCCATCGTGAACCTTGTAGCCGAACTGTaGGGTCCCTGGGTCCTCACATCGGATGAGCTCGAAACTAGAGAA +
Preference number: 5 (lower is better)
Translates to: APCKMTSIVNLVAEL*GPWVLTSDELETRE
Trigger: TTCTCTAGTTTCGAGCTCATCCGATGTGAGGACCCAGGGACCCCACAGTTCGGCTACAAGGTTCACGATGGAGGTCATTTTGCAGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp AACATTATAGCCAGCTCCCCTCACGATGCCATTGGCAAAAGGCTCTaGGTCTGGGCACTCTTGGAGTTCGTAGGCCTGGTACTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: NIIASSPHDAIGKRL*VWALLEFVGLVLQL
Trigger: AAGCTGGAGTACCAGGCCTACGAACTCCAAGAGTGCCCAGACCCAGAGCCTTTTGCCAATGGCATCGTGAGGGGAGCTGGCTATAATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGGGGCCACTCAGCTCCTaGAGGAGGACCCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGGPLSS*RRTPLS
Trigger: GGAAAGTGGGGTCCTCCTCAAGGAGCTGAGTGGCCC...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGCTGGATGGCAAAGCCTaGCTTGCTGGTGAAGAAGTC +
Preference number: 5 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWLDGKA*LAGEEV
Trigger: GACTTCTTCACCAGCAAGCAAGGCTTTGCCATCCAG...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTACGGCACCACACAGGTaGGTGCAGAGACATTCCACT +
Preference number: 5 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSTAPHR*VQRHST
Trigger: AGTGGAATGTCTCTGCACCAACCTGTGTGGTGCCGT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTCCGTTGATGTGTCCGTaGACAATGGGCTCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSPLMCP*TMGSGV
Trigger: GACTCCAGAGCCCATTGTCAACGGACACATCAACGG...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GCCCACCAGCCTTTGCTCCTTGAGTGTCTCCTGGGACCTCCCAAGCACACACAGTTGAAGTTTTCCCCGTaGATGTGTCCGTTGACAATG +
Preference number: 5 (lower is better)
Translates to: AHQPLLLECLLGPPKHTQLKFSP*MCPLTM
Trigger: CATTGTCAACGGACACATCAACGGGGAAAACTTCAA...CTGTGTGTGCTTGGGAGGTCCCAGGAGACACTCAAGGAGCAAAGGCTGGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGAACTTGACCACGTCGTaGAGGTTGAACTGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLNLTTS*RLNWLP
Trigger: GGGCAGCCAGTTCAACCTCAACGACGTGGTCAAGTT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACCCAACCTGATAGCCTaGGGAGCTGTTCTGTATTCC +
Preference number: 5 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQPNLIA*GAVLYS
Trigger: GGAATACAGAACAGCTCCCAAGGCTATCAGGTTGGG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCCACTCCAGGTCAGGTaGGGAAGGCAGGTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGPLQVR*GRQVLV
Trigger: CACCAGGACCTGCCTTCCCAACCTGACCTGGAGTGG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTTTCCACAAGGAGTTCTaGGCAAAAACATCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: CYRCANGATPAARWLLHAFHKEF*AKTSPG
Trigger: TCCAGGGGATGTTTTTGCCAAGAACTCCTTGTGGAA...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTATGGTGGCGTTGACCTaGCTGTTGGCTACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPMVALT*LLATWK
Trigger: CTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCAT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTATGGTGGCGTTGACCTaGCTGTTGGCTACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSMVALT*LLATWK
Trigger: CTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCAT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 90 bp TGGGTTTTCTGTGTAGTCAATAACGAAGCCAGCATTGCTCACAGATaGGTCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTGCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: WVFCVVNNEASIAHR*VAAEGEEEAVAAAF
Trigger: GAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGACGCATCTGTGAGCAATGCTGGCTTCGTTATTGACTACACAGAAAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CGAAGGTCACTGATTGTCCAACATTATAGCCAGCTCCCCTCACGATaGCATTGGCAAAAGGCTCTGGGTCTGGGCACTCTTGGAGTTCGT +
Preference number: 5 (lower is better)
Translates to: RRSLIVQHYSQLPSR*HWQKALGLGTLGVR
Trigger: ACGAACTCCAAGAGTGCCCAGACCCAGAGCCTTTTGCCAATGGCATCGTGAGGGGAGCTGGCTATAATGTTGGACAATCAGTGACCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CACCAAATAGCGCTCTCCTGTCTTCACCCCATTGCTGGGTACAGCTaGTTCGGGACAACTGCTCAAGCCCACGGTCTTATATTCCAAGTG +
Preference number: 5 (lower is better)
Translates to: HQIALSCLHPIAGYS*FGTTAQAHGLIFQV
Trigger: CACTTGGAATATAAGACCGTGGGCTTGAGCAGTTGTCCCGAACCAGCTGTACCCAGCAATGGGGTGAAGACAGGAGAGCGCTATTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp TCACTGATTGTCCAACATTATAGCCAGCTCCCCTCACGATGCCATTaGCAAAAGGCTCTGGGTCTGGGCACTCTTGGAGTTCGTAGGCCT +
Preference number: 5 (lower is better)
Translates to: SLIVQHYSQLPSRCH*QKALGLGTLGVRRP
Trigger: AGGCCTACGAACTCCAAGAGTGCCCAGACCCAGAGCCTTTTGCCAATGGCATCGTGAGGGGAGCTGGCTATAATGTTGGACAATCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTAGCTCAATCTGCTTCTaGACTTGGTACTGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPSSICF*TWYWAL
Trigger: CAGCGCCCAGTACCAAGTCAAGAAGCAGATTGAGCT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGTTCTGGTTATTGTCCTaGCTGGGCATCAGCTTCACG +
Preference number: 5 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWFWLLS*LGISFT
Trigger: CGTGAAGCTGATGCCCAGCAAGGACAATAACCAGAA...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGGATTCTCTTGGACCCTaGCAGGTCATAGCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLDSLGP*QVIALV
Trigger: AACGAGGGCTATGACCTGCAAGGGTCCAAGAGAATC...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAAGAAGAGGAGCCACATTaGATGGTGTGTGCTGACGAT +
Preference number: 5 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQEEEPH*MVCADD
Trigger: ATCGTCAGCACACACCATCAAATGTGGCTCCTCTTC...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGAGAGATGAAGCGGACTaGAGCGGTGAAGTTGCCATA +
Preference number: 5 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWRDEAD*SGEVAI
Trigger: TATGGCAACTTCACCGCTCAAGTCCGCTTCATCTCT...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTATGGCAAAGCCTTGCTaGCTGGTGAAGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSMAKPC*LVKKSV
Trigger: CACGGACTTCTTCACCAGCAAGCAAGGCTTTGCCAT...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTATAACGAAGCCAGCATaGCTCACAGATGCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPITKPA*LTDASL
Trigger: CAGCGACGCATCTGTGAGCAATGCTGGCTTCGTTAT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGTCTAAGAAGTCGTGGTaGGGCTCCGTGGAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLSKKSW*GSVEKF
Trigger: GAACTTCTCCACGGAGCCCAACCACGACTTCTTAGA...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTTTGAGCAGGACCTGGTaGGAGGAGCTGTGTGCTATT +
Preference number: 5 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPLSRTW*EELCAI
Trigger: AATAGCACACAGCTCCTCCAACCAGGTCCTGCTCAA...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGGGGTTGCAAATGAACTaGACCACGTCGTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWGLQMN*TTSLRL
Trigger: CAACCTCAACGACGTGGTCAAGTTCATTTGCAACCC...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGCTATCGATGTGCAAATGGGGCCACCCCTGCAGCCAGGTGGCTTCTGCATGCTTATGTCACAGTCTTGTaGTACCTGAAGTCATTGCCC +
Preference number: 5 (lower is better)
Translates to: CYRCANGATPAARWLLHAYVTVL*YLKSLP
Trigger: GGGCAATGACTTCAGGTACAACAAGACTGTGACATA...AGCATGCAGAAGCCACCTGGCTGCAGGGGTGGCCCCATTTGCACATCGATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGCCATTGAATGGGACTTaGGGTCTTCTCCTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWPLNGT*GLLLCL
Trigger: CAAGCACAGGAGAAGACCCAAAGTCCCATTCAATGG...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp ACTCCAGGGGCTCCCCATCACTTAATGTGTAGCCCGAGTCACAGCTaGAGGTCACCAGAGCACCCACATAGAAGTCATTTCCATGACGTT +
Preference number: 5 (lower is better)
Translates to: TPGAPHHLMCSPSHS*RSPEHPHRSHFHDV
Trigger: AACGTCATGGAAATGACTTCTATGTGGGTGCTCTGGTGACCTTCAGCTGTGACTCGGGCTACACATTAAGTGATGGGGAGCCCCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp GCTGGTTCGGGGTACCGCTTGGTAGACAAAGTGGAACCCCCGGGCTaGTACTTGACCTTTGGCGCTAAACTTGATGAGAACTTGATTGGA +
Preference number: 5 (lower is better)
Translates to: AGSGYRLVDKVEPPG*YLTFGAKLDENLIG
Trigger: TCCAATCAAGTTCTCATCAAGTTTAGCGCCAAAGGTCAAGTATCAGCCCGGGGGTTCCACTTTGTCTACCAAGCGGTACCCCGAACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp TCAAACACTGATAGGACATCAAAGTCCTCCTCTAATGCAAAGGACTaGAACACGAGCTGGATCCTGTGCTGGTCCTCCGCGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: SNTDRTSKSSSNAKD*NTSWILCWSSAVMV
Trigger: GACCATCACCGCGGAGGACCAGCACAGGATCCAGCTCGTGTTCCAGTCCTTTGCATTAGAGGAGGACTTTGATGTCCTATCAGTGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGAAACTTGATGAGAACTaGATTGGAGGTGGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWKLDEN*IGGGQG
Trigger: CCCTTGGCCACCTCCAATCAAGTTCTCATCAAGTTT...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CACCTCCTGCGTATTTTGTGGCTCATGCGTCCATCTTCCCTGACCCCTGAATGGATCTTCCACACACAGTaGAGGCTGTTGAGATATGGC +
Preference number: 5 (lower is better)
Translates to: HLLRILWLMRPSSLTPEWIFHTQ*RLLRYG
Trigger: GCCATATCTCAACAGCCTCAACTGTGTGTGGAAGAT...CCATTCAGGGGTCAGGGAAGATGGACGCATGAGCCACAAAATACGCAGGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTGACAAAACTGATGACTaGAATCTGGATGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSDKTDD*NLDASA
Trigger: GGCGCTGGCATCCAGATTCAAGTCATCAGTTTTGTC...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGCCCCTCACGATGCCATaGGCAAAAGGCTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGPLTMP*AKGSGS
Trigger: AGACCCAGAGCCTTTTGCCAATGGCATCGTGAGGGG...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TTGATTAAGGAGCTGCCAGGTCCTCTGCTGTGGTTGCGGGCTGTTGGAAGCCAACTGTGTGCTATTTTCTaGGACAAACTCCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LIKELPGPLLWLRAVGSQLCAIF*DKLRVK
Trigger: CTTCACCCGGAGTTTGTCCAAGAAAATAGCACACAG...TTGGCTTCCAACAGCCCGCAACCACAGCAGAGGACCTGGCAGCTCCTTAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGAGTGCACTTCGCATATaGGGGGTGGACCTTCAAACT +
Preference number: 5 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLSALRI*GVDLQT
Trigger: AGTTTGAAGGTCCACCCCCAATATGCGAAGTGCACT...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CCACGCACACGCATACACACGCTTCCCTTTCTTAAGCCTCTGTGGTCTCTTCTGCCTGAGGTCAAGTCTTaGAAAGCCGAACTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: PRTRIHTLPFLKPLWSLLPEVKS*KAELPK
Trigger: TTTGGGCAGTTCGGCTTTCAAAGACTTGACCTCAGG...CAGAAGAGACCACAGAGGCTTAAGAAAGGGAAGCGTGTGTATGCGTGTGCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGATGTGGCCCGCACGTTaGTGTTCTCGTGGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGMWPAR*CSRGQH
Trigger: ATGCTGGCCACGAGAACACAAACGTGCGGGCCACAT...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 90 bp TTGCAAATGAACTTGACCACGTCGTTGAGGTTGAACTGGCTGCCCTaGGTAAGGCCGTTGACTGGATTGCCTGGGTGTCCACAGGTAATT +
Preference number: 5 (lower is better)
Translates to: LQMNLTTSLRLNWLP*VRPLTGLPGCPQVI
Trigger: AATTACCTGTGGACACCCAGGCAATCCAGTCAACGGCCTTACTCAGGGCAGCCAGTTCAACCTCAACGACGTGGTCAAGTTCATTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp GATCACCTTGGCAGGGTTGAGTGCAGTGATGATCCACACGCAGTGTaGATTGTTGTCATACTGAATGGGGAAGTTGGGGGACGTGATGAT +
Preference number: 5 (lower is better)
Translates to: DHLGRVECSDDPHAV*IVVILNGEVGGRDD
Trigger: ATCATCACGTCCCCCAACTTCCCCATTCAGTATGACAACAATGCACACTGCGTGTGGATCATCACTGCACTCAACCCTGCCAAGGTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp AAAATGACCTCCATCGTGAACCTTGTAGCCGAACTGTGGGGTCCCTaGGTCCTCACATCGGATGAGCTCGAAACTAGAGAACTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: KMTSIVNLVAELWGP*VLTSDELETRELKF
Trigger: GAACTTCAGTTCTCTAGTTTCGAGCTCATCCGATGTGAGGACCCAGGGACCCCACAGTTCGGCTACAAGGTTCACGATGGAGGTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp TATTCAGGAGGGCTGGTACTGTTGTTCCCGAGAAACTCCCCAGCATaGTTACGGTGTTATCTGCTCCGTCAAACACTTCTAGAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: YSGGLVLLFPRNSPA*LRCYLLRQTLLESP
Trigger: GGGACTCTCTAGAAGTGTTTGACGGAGCAGATAACACCGTAACCATGCTGGGGAGTTTCTCGGGAACAACAGTACCAGCCCTCCTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp CTCATGCGTCCATCTTCCCTGACCCCTGAATGGAAACAGCGAGTCCTGCTTTGGCAAAACAGGACTCCCTaGGGTTTTCTGTGTAGTCAA +
Preference number: 5 (lower is better)
Translates to: LMRPSSLTPEWKQRVLLWQNRTP*GFLCSQ
Trigger: TTGACTACACAGAAAACCCAAGGGAGTCCTGTTTTG...CCAAAGCAGGACTCGCTGTTTCCATTCAGGGGTCAGGGAAGATGGACGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGTCTGTCAGAAGCTCATaGGTCGGGCAGTGCACTTCG +
Preference number: 5 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGSVRSS*VGQCTS
Trigger: CGAAGTGCACTGCCCGACCAATGAGCTTCTGACAGA...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp ATCTTCTTGTTGAGACTCCCCTCCCTTCCTGCCTTTGGTGCCCACTGTAGACCTAGTGTATATCCGGAATaGCAGGAGAAGATGGCAGTC +
Preference number: 5 (lower is better)
Translates to: IFLLRLPSLPAFGAHCRPSVYPE*QEKMAV
Trigger: GACTGCCATCTTCTCCTGCAATTCCGGATATACACT...AGGTCTACAGTGGGCACCAAAGGCAGGAAGGGAGGGGAGTCTCAACAAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 90 bp TGCTTTCAATGCGGCTGGGGAGCTGTGAGCCATAGAAGCTTCCTATaGGAGGGCTCAGAGAGTCCCTTCCATCGTAGATGTGAAGAAAAT +
Preference number: 5 (lower is better)
Translates to: CFQCGWGAVSHRSFL*EGSESPFHRRCEEN
Trigger: ATTTTCTTCACATCTACGATGGAAGGGACTCTCTGAGCCCTCTCATAGGAAGCTTCTATGGCTCACAGCTCCCCAGCCGCATTGAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAGCGAGGAAGAGGCTGTaGCTGCTGCTTTCAATGCGG +
Preference number: 5 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRARKRL*LLLSMR
Trigger: CCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGC...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGCCAGGCTCCTGAGTCAGATTCCTGCTGTATCCCCCACTCCACCATGACTTTAAACACAATTCCATTTTaGGGAGCATCAGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: CQAPESDSCCIPHSTMTLNTIPF*GASGRP
Trigger: TGGTCTCCCTGATGCTCCCAAAAATGGAATTGTGTT...TAAAGTCATGGTGGAGTGGGGGATACAGCAGGAATCTGACTCAGGAGCCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp ACACACCAACCTGAGTTAACACAGATGTCTTCTGGTTATTGTCCTTaGTGGGCATCAGCTTCACGCCTCGAGACTTCAGCTCAATCTGCT +
Preference number: 5 (lower is better)
Translates to: THQPELTQMSSGYCP*WASASRLETSAQSA
Trigger: AGCAGATTGAGCTGAAGTCTCGAGGCGTGAAGCTGATGCCCAGCAAGGACAATAACCAGAAGACATCTGTGTTAACTCAGGTTGGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 90 bp CACCAACCTGAGTTAACACAGATGTCTTCTGGTTATTGTCCTTGCTaGGCATCAGCTTCACGCCTCGAGACTTCAGCTCAATCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: HQPELTQMSSGYCPC*ASASRLETSAQSAS
Trigger: AGAAGCAGATTGAGCTGAAGTCTCGAGGCGTGAAGCTGATGCCCAGCAAGGACAATAACCAGAAGACATCTGTGTTAACTCAGGTTGGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGAGGTCATTGCAGGAGGTaGCGGTGGACACTGAGAACT +
Preference number: 5 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRGHCRR*RWTLRT
Trigger: AGTTCTCAGTGTCCACCGCAACCTCCTGCAATGACC...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GGGATGGAGGTGGTAGATACAGGGATGGTGGGTGAAGGGCTTAATCTGCCTAGTTGGTATGTCACAGTCTaGTTGTACCTGAAGTCATTG +
Preference number: 5 (lower is better)
Translates to: GMEVVDTGMVGEGLNLPSWYVTV*LYLKSL
Trigger: CAATGACTTCAGGTACAACAAGACTGTGACATACCA...ACTAGGCAGATTAAGCCCTTCACCCACCATCCCTGTATCTACCACCTCCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp TGGGGACACATTGGTTTGAGAGGCAATGATGCTTTTCTCATCATCTCCTCTGGGTTGCACATGATAGCTTaGCAAACCGGCTTGGTACCG +
Preference number: 5 (lower is better)
Translates to: WGHIGLRGNDAFLIISSGLHMIA*QTGLVP
Trigger: CGGTACCAAGCCGGTTTGCAAAGCTATCATGTGCAA...CCCAGAGGAGATGATGAGAAAAGCATCATTGCCTCTCAAACCAATGTGTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGACGTGACCTGGTAGACTaGAAGCAGGAGGCGGAAATC +
Preference number: 5 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRRDLVD*KQEAEI
Trigger: GATTTCCGCCTCCTGCTTCAAGTCTACCAGGTCACG...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS-3UTR CAA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGATTGTACCTGAAGTCATaGCCCAGCCGGATGCCATTG +
Preference number: 5 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRLYLKS*PSRMPL
Trigger: CAATGGCATCCGGCTGGGCAATGACTTCAGGTACAA...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp GGACTTTGCCCTGAGGGACCGTCAAAGATCTCAAATTCATCATACTaGTTCTCGCTAAGGAAGTACTCCACCGTGATCGAGATATTGTAC +
Preference number: 5 (lower is better)
Translates to: GLCPEGPSKISNSSY*FSLRKYSTVIEILY
Trigger: GTACAATATCTCGATCACGGTGGAGTACTTCCTTAGCGAGAAGCAGTATGATGAATTTGAGATCTTTGACGGTCCCTCAGGGCAAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 90 bp CTCGAAACTAGAGAACTGAAGTTCAAAGCCTTTGCTGGTGTTTTCTaGATCTGTGATGAAGTCAAGCCACAAGCTGCTAGACGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LETRELKFKAFAGVF*ICDEVKPQAARRAV
Trigger: AACAGCACGTCTAGCAGCTTGTGGCTTGACTTCATCACAGATGCAGAAAACACCAGCAAAGGCTTTGAACTTCAGTTCTCTAGTTTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS-3UTR CAA 90 bp GACCTTCTTACTCATTCTTCATGTCCCTACACATGGGGACACATTGGTTTGAGATTCCACAAGGAGTTCTaGGCAAAAACATCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: DLLTHSSCPYTWGHIGLRFHKEF*AKTSPG
Trigger: TCCAGGGGATGTTTTTGCCAAGAACTCCTTGTGGAA...TCTCAAACCAATGTGTCCCCATGTGTAGGGACATGAAGAATGAGTAAGAAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 72 bp CTCCCGCTGGGCCGGACCTCCAGGCAGACGGGCGGTTaGCCTGTCCAGCTGCCGTCGGCTTTGCAGGTACGG +
Preference number: 6 (lower is better)
Translates to: LPLGRTSRQTGG*PVQLPSALQVR
Trigger: CCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGAGGTCCGGCCCAGCGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CCGCTGGGCCGGACCTCTGCCAGGCAGACGGGCGGTTaGCCTGTCCAGCTGCCGTCGGCTTTGCAGGTACGG +
Preference number: 6 (lower is better)
Translates to: PLGRTSARQTGG*PVQLPSALQVR
Trigger: CCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGCAGAGGTCCGGCCCAGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221199.2
CDS CAA 90 bp ACCTCCAGGCAGACGGGCGGTTTGCCTGTCCAGCTGCCGTCGGCTTaGCAGGTACGGTGCTCGGAGCCACCCCGGAGGGAGAAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: TSRQTGGLPVQLPSA*QVRCSEPPRREKPS
Trigger: GGAGGGCTTCTCCCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp TCTGCCAGGCAGACGGGCGGTTTGCCTGTCCAGCTGCCGTCGGCTTaGCAGGTACGGTGCTCGGAGCCACCCCGGAGGGAGAAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: SARQTGGLPVQLPSA*QVRCSEPPRREKPS
Trigger: GGAGGGCTTCTCCCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000221199.2
CDS GCA 72 bp TCCCGCTGGGCCGGACCTCCAGGCAGACGGGCGGTTTaGCTGTCCAGCTGCCGTCGGCTTTGCAGGTACGGT +
Preference number: 6 (lower is better)
Translates to: SRWAGPPGRRAV*LSSCRRLCRYG
Trigger: ACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGAGGTCCGGCCCAGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CGCTGGGCCGGACCTCTGCCAGGCAGACGGGCGGTTTaGCTGTCCAGCTGCCGTCGGCTTTGCAGGTACGGT +
Preference number: 6 (lower is better)
Translates to: RWAGPLPGRRAV*LSSCRRLCRYG
Trigger: ACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGCAGAGGTCCGGCCCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221199.2
CDS CAA 72 bp CAGACGGGCGGTTTGCCTGTCCAGCTGCCGTCGGCTTaGCAGGTACGGTGCTCGGAGCCACCCCGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: QTGGLPVQLPSA*QVRCSEPPRRE
Trigger: CTCCCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 72 bp AAGCGCCCAAATCCCGATTTCGCCGCGAGCCCTCACTaGCGGGCAGCCGCAACATCCTTGCTCCGGTCCCCG +
Preference number: 6 (lower is better)
Translates to: KRPNPDFAASPH*RAAATSLLRSP
Trigger: CGGGGACCGGAGCAAGGATGTTGCGGCTGCCCGGCAGTGAGGGCTCGCGGCGAAATCGGGATTTGGGCGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp TTGCCTGTCCAGCTGCCGTCGGCTTTGCAGGTACGGTaGTCGGAGCCACCCCGGAGGGAGAAGCCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LPVQLPSALQVR*SEPPRREKPSW
Trigger: CCAGGAGGGCTTCTCCCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 72 bp AGACGGGCGGTTTGCCTGTCCAGCTGCCGTCGGCTTTaGAGGTACGGTGCTCGGAGCCACCCCGGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: RRAVCLSSCRRL*RYGARSHPGGR
Trigger: TCTCCCTCCGGGGTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 72 bp GGACCTCCAGGCAGACGGGCGGTTTGCCTGTCCAGCTaGCGTCGGCTTTGCAGGTACGGTGCTCGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: GPPGRRAVCLSS*RRLCRYGARSH
Trigger: GTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGAGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CCTCTGCCAGGCAGACGGGCGGTTTGCCTGTCCAGCTaGCGTCGGCTTTGCAGGTACGGTGCTCGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: PLPGRRAVCLSS*RRLCRYGARSH
Trigger: GTGGCTCCGAGCACCGTACCTGCAAAGCCGACGGCAGCTGGACAGGCAAACCGCCCGTCTGCCTGGCAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000221199.2
CDS TCA 72 bp GGGACCCCTGGGTCTCCGCAGAACACCGGGAAGCACTaGGGCAGCTCTCCGGTCCAGGATCCGTTTCCCTCG +
Preference number: 6 (lower is better)
Translates to: GTPGSPQNTGKH*GSSPVQDPFPS
Trigger: CGAGGGAAACGGATCCTGGACCGGAGAGCTGCCTCAGTGCTTCCCGGTGTTCTGCGGAGACCCAGGGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp GCACTGATGGGGGCTGGCAGCCTCGAGCCGGTCAGTTaGCTCAGGGGCTGGGAGAAGCTGCCGTTCTCAGTG +
Preference number: 6 (lower is better)
Translates to: ALMGAGSLEPVS*LRGWEKLPFSV
Trigger: CACTGAGAACGGCAGCTTCTCCCAGCCCCTGAGGCAACTGACCGGCTCGAGGCTGCCAGCCCCCATCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TTGGGGGACGTGATGATACCCGAGGGACCTCGGAGGTaGGCATCACACATGCGGGCTCGGCAGACCGGCCTG +
Preference number: 6 (lower is better)
Translates to: LGDVMIPEGPRR*ASHMRARQTGL
Trigger: CAGGCCGGTCTGCCGAGCCCGCATGTGTGATGCCCACCTCCGAGGTCCCTCGGGTATCATCACGTCCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GGTGAAGTTGCCATAGAGCCCGGCACTGATGGGGGCTaGCAGCCTCGAGCCGGTCAGTTGCCTCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: GEVAIEPGTDGG*QPRAGQLPQGL
Trigger: CAGCCCCTGAGGCAACTGACCGGCTCGAGGCTGCCAGCCCCCATCAGTGCCGGGCTCTATGGCAACTTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CCGAAGTGGATGGAGCCGCCCGGCTGGGTGGTTGTCTaGCCCAGGATGAAGCCGTGGAGTGGAGCCTTAGGC +
Preference number: 6 (lower is better)
Translates to: PKWMEPPGWVVV*PRMKPWSGALG
Trigger: GCCTAAGGCTCCACTCCACGGCTTCATCCTGGGCCAGACAACCACCCAGCCGGGCGGCTCCATCCACTTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GGTGGCCAAGGGCAGCGACTCTCCTGTGTGAGAGCCTaGGAGGGAGCTGAGGAGCCGGGAGTGCTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: GGQGQRLSCVRA*EGAEEPGVLAV
Trigger: TACAGCCAGCACTCCCGGCTCCTCAGCTCCCTCTCAGGCTCTCACACAGGAGAGTCGCTGCCCTTGGCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CTCCCAGGCTCCACCTCCCGTTGGCCTGGCAGCGGATaGCCCTTTGGCCCGTGTAGTAGTAGCCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: LPGSTSRWPGSG*PFGPCSSSQGH
Trigger: GTGACCCTGGCTACTACTACACGGGCCAAAGGGTCATCCGCTGCCAGGCCAACGGGAGGTGGAGCCTGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CTGATGGCCCGGTTAGGTCTCCCCCACAAGGAGCGATaGACGTGGGCGGGCTGGGCTGCCAGAAGAATCGGT +
Preference number: 6 (lower is better)
Translates to: LMARLGLPHKER*TWAGWAARRIG
Trigger: ACCGATTCTTCTGGCAGCCCAGCCCGCCCACGTGCATCGCTCCTTGTGGGGGAGACCTAACCGGGCCATCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp GGAGGGAGCCTGTCCAGTGTCCGTCCAGTCCACACATaGGGGTGGAGTTTCCCACCAGAGTCCGCTTGCCCG +
Preference number: 6 (lower is better)
Translates to: GGSLSSVRPVHT*GWSFPPESACP
Trigger: CGGGCAAGCGGACTCTGGTGGGAAACTCCACCCGCATGTGTGGACTGGACGGACACTGGACAGGCTCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GCCCGGTTAGGTCTCCCCCACAAGGAGCGATGCACGTaGGCGGGCTGGGCTGCCAGAAGAATCGGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: ARLGLPHKERCT*AGWAARRIGSG
Trigger: TCCAGAACCGATTCTTCTGGCAGCCCAGCCCGCCCACGTGCATCGCTCCTTGTGGGGGAGACCTAACCGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GTGGTGCCGAAGCTGAATCTGTGGGGCCCGCTGGTGTaGACTTGCCGGACACTGTTCTCCTGGTGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: VVPKLNLWGPLV*TCRTLFSWCPG
Trigger: TCCCGGGCACCAGGAGAACAGTGTCCGGCAAGTCCACACCAGCGGGCCCCACAGATTCAGCTTCGGCACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CAGCTGGGCTGTGTGCCACTCCACGTCCCGTCTGACTaGCAAAACCTCCGTGGGGAGCCCACCAGCACCAGA +
Preference number: 6 (lower is better)
Translates to: QLGCVPLHVPSD*QNLRGEPTSTR
Trigger: TCTGGTGCTGGTGGGCTCCCCACGGAGGTTTTGCCAGTCAGACGGGACGTGGAGTGGCACACAGCCCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GCAGCGACTCTCCTGTGTGAGAGCCTGAGAGGGAGCTaGGGAGCCGGGAGTGCTGGCTGTAGCCGTCGTGTA +
Preference number: 6 (lower is better)
Translates to: AATLLCESLRGS*GAGSAGCSRRV
Trigger: TACACGACGGCTACAGCCAGCACTCCCGGCTCCTCAGCTCCCTCTCAGGCTCTCACACAGGAGAGTCGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CACTCAGGCTGCGACCCGCTCCAGGAGCCATTGGCTTaGCACATTCGCTCGGAAGATCCCCGGAGCACGTGG +
Preference number: 6 (lower is better)
Translates to: HSGCDPLQEPLA*HIRSEDPRSTW
Trigger: CCACGTGCTCCGGGGATCTTCCGAGCGAATGTGTCAAGCCAATGGCTCCTGGAGCGGGTCGCAGCCTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp TATGCAGCTGGGCTGTGTGCCACTCCACGTCCCGTCTaGCTGGCAAAACCTCCGTGGGGAGCCCACCAGCAC +
Preference number: 6 (lower is better)
Translates to: YAAGLCATPRPV*LAKPPWGAHQH
Trigger: GTGCTGGTGGGCTCCCCACGGAGGTTTTGCCAGTCAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CACCCCGGAGGGAGAAGCCCTCCTGGCAGGAGTAGATaGGTGTGTAACCCATGGATGGCAGGTCCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: HPGGRSPPGRSR*VCNPWMAGPGP
Trigger: GGGCCCTGGACCTGCCATCCATGGGTTACACACTCATCTACTCCTGCCAGGAGGGCTTCTCCCTCCGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 72 bp CCCCCACAAGGAGCGATGCACGTGGGCGGGCTGGGCTaGCAGAAGAATCGGTTCTGGATCTTCACGCAGCTG +
Preference number: 6 (lower is better)
Translates to: PPQGAMHVGGLG*QKNRFWIFTQL
Trigger: CAGCTGCGTGAAGATCCAGAACCGATTCTTCTGGCAGCCCAGCCCGCCCACGTGCATCGCTCCTTGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp GGGTCTTGCCCGACCAGTGATGATCCTGCTGGCAGATaGGCACAGACATGCCGATCAGGCGGAAGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GSCPTSDDPAGR*AQTCRSGGSQP
Trigger: GGGCTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGTCGGGCAAGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CCGAAGCTGAATCTGTGGGGCCCGCTGGTGTGGACTTaGCGGACACTGTTCTCCTGGTGCCCGGGATCCGTA +
Preference number: 6 (lower is better)
Translates to: PKLNLWGPLVWT*RTLFSWCPGSV
Trigger: TACGGATCCCGGGCACCAGGAGAACAGTGTCCGGCAAGTCCACACCAGCGGGCCCCACAGATTCAGCTTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GAGCCGCAGCCAGTTCTTGCTGCTGATGACAGGGGCTaGGAGGCTGGCTCCGGTAAACCAGAGAGAGGAGCC +
Preference number: 6 (lower is better)
Translates to: EPQPVLAADDRG*EAGSGKPERGA
Trigger: GGCTCCTCTCTCTGGTTTACCGGAGCCAGCCTCCCAGCCCCTGTCATCAGCAGCAAGAACTGGCTGCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GGTCTCCCCCACAAGGAGCGATGCACGTGGGCGGGCTaGGCTGCCAGAAGAATCGGTTCTGGATCTTCACGC +
Preference number: 6 (lower is better)
Translates to: GLPHKERCTWAG*AARRIGSGSSR
Trigger: GCGTGAAGATCCAGAACCGATTCTTCTGGCAGCCCAGCCCGCCCACGTGCATCGCTCCTTGTGGGGGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CCTGTGTTGCATCCGAAGTGGATGGAGCCGCCCGGCTaGGTGGTTGTCTGGCCCAGGATGAAGCCGTGGAGT +
Preference number: 6 (lower is better)
Translates to: PVLHPKWMEPPG*VVVWPRMKPWS
Trigger: ACTCCACGGCTTCATCCTGGGCCAGACAACCACCCAGCCGGGCGGCTCCATCCACTTCGGATGCAACACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CAAGGCAGCGGACTTCAGAGCCACTCCAGAGTCCATTaGCCATGCACTCCCGCACCCTGGAGCCCACCAGTG +
Preference number: 6 (lower is better)
Translates to: QGSGLQSHSRVH*PCTPAPWSPPV
Trigger: CACTGGTGGGCTCCAGGGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTGGCTCTGAAGTCCGCTGCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp AGCCTGTCCAGTGTCCGTCCAGTCCACACATGCGGGTaGAGTTTCCCACCAGAGTCCGCTTGCCCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SLSSVRPVHTCG*SFPPESACPCS
Trigger: GCTGCACGGGCAAGCGGACTCTGGTGGGAAACTCCACCCGCATGTGTGGACTGGACGGACACTGGACAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GTCCAGGGCCCCGACATTGGCGTGTGTGGGCGTCTCTaGTTGTTTGCAGTGGTGGGGGACACAGTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: VQGPDIGVCGRL*LFAVVGDTVRW
Trigger: CCACCTGACTGTGTCCCCCACCACTGCAAACAACCAGAGACGCCCACACACGCCAATGTCGGGGCCCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TGGATGGCAGGTCCAGGGCCCCGACATTGGCGTGTGTaGGCGTCTCTGGTTGTTTGCAGTGGTGGGGGACAC +
Preference number: 6 (lower is better)
Translates to: WMAGPGPRHWRV*ASLVVCSGGGH
Trigger: GTGTCCCCCACCACTGCAAACAACCAGAGACGCCCACACACGCCAATGTCGGGGCCCTGGACCTGCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp AAGGCACCAGGATGGCGGCGGCCACTGAGCTGCTGTTaGAAGCAAAGTGCCGGCCGATGGACTCGGGATCTG +
Preference number: 6 (lower is better)
Translates to: KAPGWRRPLSCC*KQSAGRWTRDL
Trigger: CAGATCCCGAGTCCATCGGCCGGCACTTTGCTTCCAACAGCAGCTCAGTGGCCGCCGCCATCCTGGTGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 72 bp GCAAGGCAGCGGACTTCAGAGCCACTCCAGAGTCCATaGGCCATGCACTCCCGCACCCTGGAGCCCACCAGT +
Preference number: 6 (lower is better)
Translates to: ARQRTSEPLQSP*AMHSRTLEPTS
Trigger: ACTGGTGGGCTCCAGGGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTGGCTCTGAAGTCCGCTGCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp GATCACTCCACACTCAGGCTGCGACCCGCTCCAGGAGCCATTGGCTaGACACATTCGCTCGGAAGATCCCCGGAGCACGTGGCCAGCGTC +
Preference number: 6 (lower is better)
Translates to: DHSTLRLRPAPGAIG*THSLGRSPEHVASV
Trigger: GACGCTGGCCACGTGCTCCGGGGATCTTCCGAGCGAATGTGTCAAGCCAATGGCTCCTGGAGCGGGTCGCAGCCTGAGTGTGGAGTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CCTGGAGATAGGATGGTCCCGCTGGGCGAAGTCAGGTaGCCACCACAAGGAGCTTCACAGCGCAGCACGGCA +
Preference number: 6 (lower is better)
Translates to: PGDRMVPLGEVR*PPQGASQRSTA
Trigger: TGCCGTGCTGCGCTGTGAAGCTCCTTGTGGTGGTCACCTGACTTCGCCCAGCGGGACCATCCTATCTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp TGCACCCGGCGTCTGCCTCGATGGTCCAGATGCAGTTaGGATTGTGTTCATAGGGAGCCGGGTACCCGGGCG +
Preference number: 6 (lower is better)
Translates to: CTRRLPRWSRCS*DCVHREPGTRA
Trigger: CGCCCGGGTACCCGGCTCCCTATGAACACAATCTCAACTGCATCTGGACCATCGAGGCAGACGCCGGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CGTGGTTGCACTGGTAGGAAACGGTGGTGCCGAAGCTaGATCTGTGGGGCCCGCTGGTGTGGACTTGCCGGA +
Preference number: 6 (lower is better)
Translates to: RGCTGRKRWCRS*ICGARWCGLAG
Trigger: TCCGGCAAGTCCACACCAGCGGGCCCCACAGATTCAGCTTCGGCACCACCGTTTCCTACCAGTGCAACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GAGAGCGATGAAAGGCACCAGGATGGCGGCGGCCACTaGGCTGCTGTTGGAAGCAAAGTGCCGGCCGATGGA +
Preference number: 6 (lower is better)
Translates to: ESDERHQDGGGH*AAVGSKVPADG
Trigger: TCCATCGGCCGGCACTTTGCTTCCAACAGCAGCTCAGTGGCCGCCGCCATCCTGGTGCCTTTCATCGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 72 bp GGGTGTCGCCCACACCAAACTGCAAGCCCTTTCGGATaGTGTAGGCTGGAACCTCGGGCTCTTCGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: GCRPHQTASPFG*CRLEPRALRRA
Trigger: AGCCCTGCGAAGAGCCCGAGGTTCCAGCCTACAGCATCCGAAAGGGCTTGCAGTTTGGTGTGGGCGACACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp ATTGCTGTTGCTCCACAGGCCAGTATCCAGACACTCTaGGGTGGCCTCGGCACCCGCCTGGAGATGGTAGCC +
Preference number: 6 (lower is better)
Translates to: IAVAPQASIQTL*GGLGTRLEMVA
Trigger: GGCTACCATCTCCAGGCGGGTGCCGAGGCCACCGCAGAGTGTCTGGATACTGGCCTGTGGAGCAACAGCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp TGCGGGTGGAGTTTCCCACCAGAGTCCGCTTGCCCGTaGAGCTGTAACGCACAACGGCCCCCACTATGTAGC +
Preference number: 6 (lower is better)
Translates to: CGWSFPPESACP*SCNAQRPPLCS
Trigger: GCTACATAGTGGGGGCCGTTGTGCGTTACAGCTGCACGGGCAAGCGGACTCTGGTGGGAAACTCCACCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CACACATGCGGGTGGAGTTTCCCACCAGAGTCCGCTTaGCCGTGCAGCTGTAACGCACAACGGCCCCCACTA +
Preference number: 6 (lower is better)
Translates to: HTCGWSFPPESA*PCSCNAQRPPL
Trigger: TAGTGGGGGCCGTTGTGCGTTACAGCTGCACGGGCAAGCGGACTCTGGTGGGAAACTCCACCCGCATGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp ATGGCGGCGGCCACTGAGCTGCTGTTGGAAGCAAAGTaGCGGCCGATGGACTCGGGATCTGACTCCAACAGC +
Preference number: 6 (lower is better)
Translates to: MAAATELLLEAK*RPMDSGSDSNS
Trigger: GCTGTTGGAGTCAGATCCCGAGTCCATCGGCCGGCACTTTGCTTCCAACAGCAGCTCAGTGGCCGCCGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CCA 72 bp CACGGCACCACACAGGTTGGTGCAGAGACATTCCACTaGGCCAGTGCCCCAGGTACAGGGAGGCACTCGATC +
Preference number: 6 (lower is better)
Translates to: HGTTQVGAETFH*ASAPGTGRHSI
Trigger: GATCGAGTGCCTCCCTGTACCTGGGGCACTGGCCCAGTGGAATGTCTCTGCACCAACCTGTGTGGTGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CTCCACACTCAGGCTGCGACCCGCTCCAGGAGCCATTaGCTTGACACATTCGCTCGGAAGATCCCCGGAGCA +
Preference number: 6 (lower is better)
Translates to: LHTQAATRSRSH*LDTFARKIPGA
Trigger: TGCTCCGGGGATCTTCCGAGCGAATGTGTCAAGCCAATGGCTCCTGGAGCGGGTCGCAGCCTGAGTGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CTCCTCTTACTGTCCCTCCACACTCAGCGACACAGGTaGGCAGCGGTCGGTCCCACGTCCTGCGTTCACCAC +
Preference number: 6 (lower is better)
Translates to: LLLLSLHTQRHR*AAVGPTSCVHH
Trigger: GTGGTGAACGCAGGACGTGGGACCGACCGCTGCCAACCTGTGTCGCTGAGTGTGGAGGGACAGTAAGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp ACACTCAGGCTGCGACCCGCTCCAGGAGCCATTGGCTaGACACATTCGCTCGGAAGATCCCCGGAGCACGTG +
Preference number: 6 (lower is better)
Translates to: TLRLRPAPGAIG*THSLGRSPEHV
Trigger: CACGTGCTCCGGGGATCTTCCGAGCGAATGTGTCAAGCCAATGGCTCCTGGAGCGGGTCGCAGCCTGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp CAGTGTCCAGCAAGGCAGCGGACTTCAGAGCCACTCCAGAGTCCATaGGCCATGCACTCCCGCACCCTGGAGCCCACCAGTGTATATCCG +
Preference number: 6 (lower is better)
Translates to: QCPARQRTSEPLQSP*AMHSRTLEPTSVYP
Trigger: CGGATATACACTGGTGGGCTCCAGGGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTGGCTCTGAAGTCCGCTGCCTTGCTGGACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp AACGGTGGTGCCGAAGCTGAATCTGTGGGGCCCGCTGGTGTGGACTaGCCGGACACTGTTCTCCTGGTGCCCGGGATCCGTACAGTTGAT +
Preference number: 6 (lower is better)
Translates to: NGGAEAESVGPAGVD*PDTVLLVPGIRTVD
Trigger: ATCAACTGTACGGATCCCGGGCACCAGGAGAACAGTGTCCGGCAAGTCCACACCAGCGGGCCCCACAGATTCAGCTTCGGCACCACCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CGGGGTTGCAGCTATAGCGGACCTTGTCGCCCAGGTTaGAGGTGGAGCCTTGCTGGATACCATTGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: RGCSYSGPCRPG*RWSLAGYHWAA
Trigger: GGCTGCCCAATGGTATCCAGCAAGGCTCCACCTTCAACCTGGGCGACAAGGTCCGCTATAGCTGCAACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CTGGGCGCTGAAGCCTCGCTGCCGGTGGTTACCATCTaGTGTGAAGTGGAGCCGCAGCCAGTTCTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LGAEASLPVVTI*CEVEPQPVLAA
Trigger: AGCAGCAAGAACTGGCTGCGGCTCCACTTCACATCAGATGGTAACCACCGGCAGCGAGGCTTCAGCGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp AGGCCAGGTGGATGCGGCTCTCAGGCCGGGCCAGGATaGGCCAGACACAATGGAGGTGGTTGCCATAGTCTT +
Preference number: 6 (lower is better)
Translates to: RPGGCGSQAGPG*ARHNGGGCHSL
Trigger: AAGACTATGGCAACCACCTCCATTGTGTCTGGCTCATCCTGGCCCGGCCTGAGAGCCGCATCCACCTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GCCACATGGCCACTGCTGGTGATGGAGGAGGGGAGCTaGTTTCCCGAGAAGGTACCAAGGACCGGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: ATWPLLVMEEGS*FPEKVPRTGAS
Trigger: TGAAGCCCCGGTCCTTGGTACCTTCTCGGGAAATCAGCTCCCCTCCTCCATCACCAGCAGTGGCCATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GCAGGTCCTTGGGCAGCATTGGGCCACTCAGCTCCTTaGGGAGGACCCCACTTTCCACAGGTCCATCCCAGA +
Preference number: 6 (lower is better)
Translates to: AGPWAALGHSAP*GGPHFPQVHPR
Trigger: TCTGGGATGGACCTGTGGAAAGTGGGGTCCTCCTCAAGGAGCTGAGTGGCCCAATGCTGCCCAAGGACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CAGCGACACAGGTTGGCAGCGGTCGGTCCCACGTCCTaGGTTCACCACTCAGACACATCAGTTCCTCACTGC +
Preference number: 6 (lower is better)
Translates to: QRHRLAAVGPTS*VHHSDTSVPHC
Trigger: GCAGTGAGGAACTGATGTGTCTGAGTGGTGAACGCAGGACGTGGGACCGACCGCTGCCAACCTGTGTCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CGTCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTGCTaGTTTCAATGCGGCTGGGGAGCTGTGAGCCATAGA +
Preference number: 6 (lower is better)
Translates to: RRCGRRGRGCCC*FQCGWGAVSHR
Trigger: TCTATGGCTCACAGCTCCCCAGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp ATGCGTCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCTaGTGCTTTCAATGCGGCTGGGGAGCTGTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: MRRCGRRGRGCC*CFQCGWGAVSH
Trigger: ATGGCTCACAGCTCCCCAGCCGCATTGAAAGCAGCAGCAACAGCCTCTTCCTCGCCTTCCGCAGCGACGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CACACAGGTTGGTGCAGAGACATTCCACTGGGCCAGTaGCCCAGGTACAGGGAGGCACTCGATCTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: HTGWCRDIPLGQ*PRYREALDLWG
Trigger: TCCCCAGAGATCGAGTGCCTCCCTGTACCTGGGGCACTGGCCCAGTGGAATGTCTCTGCACCAACCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp AGTGAGGTTGCCACCACACGGCACCACACAGGTTGGTaGAGAGACATTCCACTGGGCCAGTGCCCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: SEVATTRHHTGW*RDIPLGQCPRY
Trigger: GTACCTGGGGCACTGGCCCAGTGGAATGTCTCTGCACCAACCTGTGTGGTGCCGTGTGGTGGCAACCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp TGCCAGGATCTGCACATGTGGTCAGCGTGGGATCTATaGAGCTGGGCTGTGTGCCACTCCACGTCCCGTCTG +
Preference number: 6 (lower is better)
Translates to: CQDLHMWSAWDL*SWAVCHSTSRL
Trigger: CAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATAGATCCCACGCTGACCACATGTGCAGATCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CGGACCTTGTCGCCCAGGTTGAAGGTGGAGCCTTGCTaGATACCATTGGGCAGCCTCCCTGGGTTCCCACAA +
Preference number: 6 (lower is better)
Translates to: RTLSPRLKVEPC*IPLGSLPGFPQ
Trigger: TTGTGGGAACCCAGGGAGGCTGCCCAATGGTATCCAGCAAGGCTCCACCTTCAACCTGGGCGACAAGGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TCCTCTTACTGTCCCTCCACACTCAGCGACACAGGTTaGCAGCGGTCGGTCCCACGTCCTGCGTTCACCACT +
Preference number: 6 (lower is better)
Translates to: SSYCPSTLSDTG*QRSVPRPAFTT
Trigger: AGTGGTGAACGCAGGACGTGGGACCGACCGCTGCCAACCTGTGTCGCTGAGTGTGGAGGGACAGTAAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TGTTGCTCCACAGGCCAGTATCCAGACACTCTGCGGTaGCCTCGGCACCCGCCTGGAGATGGTAGCCTTCAT +
Preference number: 6 (lower is better)
Translates to: CCSTGQYPDTLR*PRHPPGDGSLH
Trigger: ATGAAGGCTACCATCTCCAGGCGGGTGCCGAGGCCACCGCAGAGTGTCTGGATACTGGCCTGTGGAGCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GATCTGCACATGTGGTCAGCGTGGGATCTATGCAGCTaGGCTGTGTGCCACTCCACGTCCCGTCTGACTGGC +
Preference number: 6 (lower is better)
Translates to: DLHMWSAWDLCS*AVCHSTSRLTG
Trigger: GCCAGTCAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATAGATCCCACGCTGACCACATGTGCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GGACACAGTCAGGTGGGGTTCCACTCCAGGTCAGGTTaGGAAGGCAGGTCCTGGTGGTGGATCCCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: GHSQVGFHSRSG*EGRSWWWIPEA
Trigger: TGCTTCAGGGATCCACCACCAGGACCTGCCTTCCCAACCTGACCTGGAGTGGAACCCCACCTGACTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CTCCTGGCAGGAGTAGATGAGTGTGTAACCCATGGATaGCAGGTCCAGGGCCCCGACATTGGCGTGTGTGGG +
Preference number: 6 (lower is better)
Translates to: LLAGVDECVTHG*QVQGPDIGVCG
Trigger: CCCACACACGCCAATGTCGGGGCCCTGGACCTGCCATCCATGGGTTACACACTCATCTACTCCTGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 72 bp ATAGCGGACCTTGTCGCCCAGGTTGAAGGTGGAGCCTaGCTGGATACCATTGGGCAGCCTCCCTGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: IADLVAQVEGGA*LDTIGQPPWVP
Trigger: GGGAACCCAGGGAGGCTGCCCAATGGTATCCAGCAAGGCTCCACCTTCAACCTGGGCGACAAGGTCCGCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp TGCAGGTCCTTGGGCAGCATTGGGCCACTCAGCTCCTaGAGGAGGACCCCACTTTCCACAGGTCCATCCCAG +
Preference number: 6 (lower is better)
Translates to: CRSLGSIGPLSS*RRTPLSTGPSQ
Trigger: CTGGGATGGACCTGTGGAAAGTGGGGTCCTCCTCAAGGAGCTGAGTGGCCCAATGCTGCCCAAGGACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CCACTCCGACTCCCATTCTGCGGGACTCCCGGGTCATaGCAGGAGGTTGCGGTGGACACTGAGAACTGGATG +
Preference number: 6 (lower is better)
Translates to: PLRLPFCGTPGS*QEVAVDTENWM
Trigger: CATCCAGTTCTCAGTGTCCACCGCAACCTCCTGCAATGACCCGGGAGTCCCGCAGAATGGGAGTCGGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp GCGAAGATCCCACCCGTGGCCGTGTCCCGGTGGAACTaGAGCAGGACCTGGTTGGAGGAGCTGTGTGCTATT +
Preference number: 6 (lower is better)
Translates to: AKIPPVAVSRWN*SRTWLEELCAI
Trigger: AATAGCACACAGCTCCTCCAACCAGGTCCTGCTCAAGTTCCACCGGGACACGGCCACGGGTGGGATCTTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp GCCGAACTGCCCAAAGCCTTGGCCCTTGACGGAGCCTaGGTAGACGAAGGTGCCTCCAGAAGACTCCGAGGA +
Preference number: 6 (lower is better)
Translates to: AELPKALALDGA*VDEGASRRLRG
Trigger: TCCTCGGAGTCTTCTGGAGGCACCTTCGTCTACCAAGGCTCCGTCAAGGGCCAAGGCTTTGGGCAGTTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 90 bp CAGCTGTCACCACTCCGACTCCCATTCTGCGGGACTCCCGGGTCATaGCAGGAGGTTGCGGTGGACACTGAGAACTGGATGGCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: QLSPLRLPFCGTPGS*QEVAVDTENWMAKP
Trigger: AGGCTTTGCCATCCAGTTCTCAGTGTCCACCGCAACCTCCTGCAATGACCCGGGAGTCCCGCAGAATGGGAGTCGGAGTGGTGACAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp TGTTGTGATACTCGGCAGGAAAGTGGGGACTGGAGATaGTTCCACTCTGGCCCCGCAGGGTCCCTCCACAGG +
Preference number: 6 (lower is better)
Translates to: CCDTRQESGDWR*FHSGPAGSLHR
Trigger: CCTGTGGAGGGACCCTGCGGGGCCAGAGTGGAATCATCTCCAGTCCCCACTTTCCTGCCGAGTATCACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp TGTTCCACACCACGCTGCCCTCCTTCAGAACACAGGTaGTGGTCTCAGAGCCCTGCGTCCCGAGGAAGCCTT +
Preference number: 6 (lower is better)
Translates to: CSTPRCPPSEHR*WSQSPASRGSL
Trigger: AAGGCTTCCTCGGGACGCAGGGCTCTGAGACCATCACCTGTGTTCTGAAGGAGGGCAGCGTGGTGTGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GTTGGGGGACAGCAAAGTGCCCTGAGTGCCTGTGACTaGGTTCCCACACTCCGCAACACACCTTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: VGGQQSALSACD*VPTLRNTPWQR
Trigger: CCTCTGCCAAGGTGTGTTGCGGAGTGTGGGAACTCAGTCACAGGCACTCAGGGCACTTTGCTGTCCCCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CCAGGGTCACAGATGAGCATCAGCTGGGCCTGGAACTaGTACTGGGTCTCAAAGATGAGCCTCCACCGGCCG +
Preference number: 6 (lower is better)
Translates to: PGSQMSISWAWN*YWVSKMSLHRP
Trigger: CGGCCGGTGGAGGCTCATCTTTGAGACCCAGTATCAGTTCCAGGCCCAGCTGATGCTCATCTGTGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CAGCACCAGAGGAGCGTGGCAGGAGAAGGACACAGATaGCCTGTAGGAGAAACCTCGGTCCTCTCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: QHQRSVAGEGHR*PVGETSVLSPP
Trigger: GGGAGGAGAGAGGACCGAGGTTTCTCCTACAGGTCATCTGTGTCCTTCTCCTGCCACGCTCCTCTGGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp GCCGGTTCTGGGAATGGTCGCTGTGGAAGTACACGATaGTATCGTGGGACGTGGAGAGCAGGGATCCAGGCA +
Preference number: 6 (lower is better)
Translates to: AGSGNGRCGSTR*YRGTWRAGIQA
Trigger: TGCCTGGATCCCTGCTCTCCACGTCCCACGATAGCATCGTGTACTTCCACAGCGACCATTCCCAGAACCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp AGCGGACTTCAGAGCCACTCCAGAGTCCATTGGCCATaGACTCCCGCACCCTGGAGCCCACCAGTGTATATC +
Preference number: 6 (lower is better)
Translates to: SGLQSHSRVHWP*TPAPWSPPVYI
Trigger: GATATACACTGGTGGGCTCCAGGGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTGGCTCTGAAGTCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp ACCAGTGATGATCCTGCTGGCAGATGCGCACAGACATaGCGATCAGGCGGAAGCCAGCCCTGCACTGGTACA +
Preference number: 6 (lower is better)
Translates to: TSDDPAGRCAQT*RSGGSQPCTGT
Trigger: TGTACCAGTGCAGGGCTGGCTTCCGCCTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp ATGTGGTCAGCGTGGGATCTATGCAGCTGGGCTGTGTaGCACTCCACGTCCCGTCTGACTGGCAAAACCTCC +
Preference number: 6 (lower is better)
Translates to: MWSAWDLCSWAV*HSTSRLTGKTS
Trigger: GGAGGTTTTGCCAGTCAGACGGGACGTGGAGTGGCACACAGCCCAGCTGCATAGATCCCACGCTGACCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp AATGCAAAGGACTGGAACACGAGCTGGATCCTGTGCTaGTCCTCCGCGGTGATGGTCCACGTGCAGTTGGCG +
Preference number: 6 (lower is better)
Translates to: NAKDWNTSWILC*SSAVMVHVQLA
Trigger: CGCCAACTGCACGTGGACCATCACCGCGGAGGACCAGCACAGGATCCAGCTCGTGTTCCAGTCCTTTGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TTGACTTGGTACTGGGCGCTGAAGCCTCGCTGCCGGTaGTTACCATCTGATGTGAAGTGGAGCCGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LTWYWALKPRCR*LPSDVKWSRSQ
Trigger: CTGGCTGCGGCTCCACTTCACATCAGATGGTAACCACCGGCAGCGAGGCTTCAGCGCCCAGTACCAAGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GCAGCTGATCTCTGCGCTCCCCTGCAGAGCATAGCCTaGGTCACACTGGAACACTGTGCTATCACCGGCTTC +
Preference number: 6 (lower is better)
Translates to: AADLCAPLQSIA*VTLEHCAITGF
Trigger: GAAGCCGGTGATAGCACAGTGTTCCAGTGTGACCCAGGCTATGCTCTGCAGGGGAGCGCAGAGATCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp AGCGAGGTTCTGGCACAGAGCTGCACTGTGTGGCGCTaGTTCGGGGTACCGCTTGGTAGACAAAGTGGAACC +
Preference number: 6 (lower is better)
Translates to: SEVLAQSCTVWR*FGVPLGRQSGT
Trigger: GGTTCCACTTTGTCTACCAAGCGGTACCCCGAACCAGCGCCACACAGTGCAGCTCTGTGCCAGAACCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GCCAGCTCCCCTCACGATGCCATTGGCAAAAGGCTCTaGGTCTGGGCACTCTTGGAGTTCGTAGGCCTGGTA +
Preference number: 6 (lower is better)
Translates to: ASSPHDAIGKRL*VWALLEFVGLV
Trigger: TACCAGGCCTACGAACTCCAAGAGTGCCCAGACCCAGAGCCTTTTGCCAATGGCATCGTGAGGGGAGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TGTAACCCATGGATGGCAGGTCCAGGGCCCCGACATTaGCGTGTGTGGGCGTCTCTGGTTGTTTGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: CNPWMAGPGPRH*RVWASLVVCSG
Trigger: ACCACTGCAAACAACCAGAGACGCCCACACACGCCAATGTCGGGGCCCTGGACCTGCCATCCATGGGTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 90 bp GTTGCAGCTATAGCGGACCTTGTCGCCCAGGTTGAAGGTGGAGCCTaGCTGGATACCATTGGGCAGCCTCCCTGGGTTCCCACAAGTGTG +
Preference number: 6 (lower is better)
Translates to: VAAIADLVAQVEGGA*LDTIGQPPWVPTSV
Trigger: CACACTTGTGGGAACCCAGGGAGGCTGCCCAATGGTATCCAGCAAGGCTCCACCTTCAACCTGGGCGACAAGGTCCGCTATAGCTGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp CGCAGAGAGCTTCACAGCTGGGCAGGGCGTGACTCCACTGGAAATTaGGCTCACACTCCAGGGGCTCCCCATCACTTAATGTGTAGCCCG +
Preference number: 6 (lower is better)
Translates to: RRELHSWAGRDSTGN*AHTPGAPHHLMCSP
Trigger: CGGGCTACACATTAAGTGATGGGGAGCCCCTGGAGTGTGAGCCAAATTTCCAGTGGAGTCACGCCCTGCCCAGCTGTGAAGCTCTCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp GCCAGGCACTGGGACCTCGCAGCCCCCTCAGCTATGTATCCTGGGTaGCAAATGAACTTGACCACGTCGTTGAGGTTGAACTGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: ARHWDLAAPSAMYPG*QMNLTTSLRLNWLP
Trigger: GGGCAGCCAGTTCAACCTCAACGACGTGGTCAAGTTCATTTGCAACCCAGGATACATAGCTGAGGGGGCTGCGAGGTCCCAGTGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp TCCCAGGGAGCTGCCACTGCTGTCACTCTGGAAGAGGAGCCACATTaGATGGTGTGTGCTGACGATGAGGTCTGGGACGGAGGTACCTGT +
Preference number: 6 (lower is better)
Translates to: SQGAATAVTLEEEPH*MVCADDEVWDGGTC
Trigger: ACAGGTACCTCCGTCCCAGACCTCATCGTCAGCACACACCATCAAATGTGGCTCCTCTTCCAGAGTGACAGCAGTGGCAGCTCCCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp GCTGTAACGCACAACGGCCCCCACTATGTAGCTGTCTCCAGACATTaGGGCATGAGGTGGAGAGCCAGGATGGCCACAGGACACCAAGAG +
Preference number: 6 (lower is better)
Translates to: AVTHNGPHYVAVSRH*GMRWRARMATGHQE
Trigger: CTCTTGGTGTCCTGTGGCCATCCTGGCTCTCCACCTCATGCCCAAATGTCTGGAGACAGCTACATAGTGGGGGCCGTTGTGCGTTACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp AGTTCCACCCCACTGTGGTCGATCATGGTGGCGTTGACCTTGCTGTaGGCTACCTGGAAGCCGGTGACTCTAAGCATGGCTGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SSTPLWSIMVALTLL*ATWKPVTLSMAGCF
Trigger: GAAGCAGCCAGCCATGCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCATGATCGACCACAGTGGGGTGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 72 bp AAGGTGCTGGCCGCACTGACTATGGTGGCTGGTAGCTaGAAGCCGGTGAGCCTTGTTCGAAGGTTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: KVLAALTMVAGS*KPVSLVRRFSA
Trigger: GGCAGAGAACCTTCGAACAAGGCTCACCGGCTTTCAGCTACCAGCCACCATAGTCAGTGCGGCCAGCACCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp ACCCTGGTGACAAGATGGTGCCACTGGAACCTTGAATaGAGCCACCGCAGAGAGCTTCACAGCTGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: TLVTRWCHWNLE*SHRRELHSWAG
Trigger: CCCTGCCCAGCTGTGAAGCTCTCTGCGGTGGCTTCATTCAAGGTTCCAGTGGCACCATCTTGTCACCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CCTCACTGCCCCGAAGACTGTAGCCAGGGTCACAGCTaGAGGTCACCGAGCTCCCTGCAAAATGACCTCCAT +
Preference number: 6 (lower is better)
Translates to: PHCPEDCSQGHS*RSPSSLQNDLH
Trigger: ATGGAGGTCATTTTGCAGGGAGCTCGGTGACCTTCAGCTGTGACCCTGGCTACAGTCTTCGGGGCAGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GCTGCCAGAAGAATCGGTTCTGGATCTTCACGCAGCTaGTCTCTGCGCTCCCCTGCAGAGCATAGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: AARRIGSGSSRS*SLRSPAEHSLG
Trigger: ACCCAGGCTATGCTCTGCAGGGGAGCGCAGAGATCAGCTGCGTGAAGATCCAGAACCGATTCTTCTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CTCCTTCCACCTCATAGCCCCCGTGGCAGTAGTAGGTaGCAGAAGAACCAAGCTTCAGGTCGGAGCCCACTC +
Preference number: 6 (lower is better)
Translates to: LLPPHSPRGSSR*QKNQASGRSPL
Trigger: GAGTGGGCTCCGACCTGAAGCTTGGTTCTTCTGTCACCTACTACTGCCACGGGGGCTATGAGGTGGAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GGCACTCTTGGAGTTCGTAGGCCTGGTACTCCAGCTTaGATCCTGGCCGGTTCTGGGAATGGTCGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: GTLGVRRPGTPA*ILAGSGNGRCG
Trigger: TCCACAGCGACCATTCCCAGAACCGGCCAGGATTCAAGCTGGAGTACCAGGCCTACGAACTCCAAGAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GCTGCAGAGATGTCTGCTGTGGCCCATCCCAGACAGTaGTGTAGTCTCCGAAGGGCTCTATCTGGAGCAGGC +
Preference number: 6 (lower is better)
Translates to: AAEMSAVAHPRQ*CSLRRALSGAG
Trigger: GCCTGCTCCAGATAGAGCCCTTCGGAGACTACATCACTGTCTGGGATGGGCCACAGCAGACATCTCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp TGCTTCTTGACTTGGTACTGGGCGCTGAAGCCTCGCTaGCGGTGGTTACCATCTGATGTGAAGTGGAGCCGC +
Preference number: 6 (lower is better)
Translates to: CFLTWYWALKPR*RWLPSDVKWSR
Trigger: GCGGCTCCACTTCACATCAGATGGTAACCACCGGCAGCGAGGCTTCAGCGCCCAGTACCAAGTCAAGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CACCAGGAAGTGGAGCCCAATGGTGCACCCGGCGTCTaGCTCGATGGTCCAGATGCAGTTGAGATTGTGTTC +
Preference number: 6 (lower is better)
Translates to: HQEVEPNGAPGV*LDGPDAVEIVF
Trigger: GAACACAATCTCAACTGCATCTGGACCATCGAGGCAGACGCCGGGTGCACCATTGGGCTCCACTTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CCCGCACCCTGGAGCCCACCAGTGTATATCCGGAATTaGAGGAGAAGATGGCAGTCGCCCCATAGACAGACA +
Preference number: 6 (lower is better)
Translates to: PAPWSPPVYIRN*RRRWQSPHRQT
Trigger: TGTCTGTCTATGGGGCGACTGCCATCTTCTCCTGCAATTCCGGATATACACTGGTGGGCTCCAGGGTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp AAGCCTCGCTGCCGGTGGTTACCATCTGATGTGAAGTaGAGCCGCAGCCAGTTCTTGCTGCTGATGACAGGG +
Preference number: 6 (lower is better)
Translates to: KPRCRWLPSDVK*SRSQFLLLMTG
Trigger: CCCTGTCATCAGCAGCAAGAACTGGCTGCGGCTCCACTTCACATCAGATGGTAACCACCGGCAGCGAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TGCCATAGCGAGGTTCTGGCACAGAGCTGCACTGTGTaGCGCTGGTTCGGGGTACCGCTTGGTAGACAAAGT +
Preference number: 6 (lower is better)
Translates to: CHSEVLAQSCTV*RWFGVPLGRQS
Trigger: ACTTTGTCTACCAAGCGGTACCCCGAACCAGCGCCACACAGTGCAGCTCTGTGCCAGAACCTCGCTATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TGGGAATGGTCGCTGTGGAAGTACACGATGCTATCGTaGGACGTGGAGAGCAGGGATCCAGGCAGCTCACTC +
Preference number: 6 (lower is better)
Translates to: WEWSLWKYTMLS*DVESRDPGSSL
Trigger: GAGTGAGCTGCCTGGATCCCTGCTCTCCACGTCCCACGATAGCATCGTGTACTTCCACAGCGACCATTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TCCCCTCACGATGCCATTGGCAAAAGGCTCTGGGTCTaGGCACTCTTGGAGTTCGTAGGCCTGGTACTCCAG +
Preference number: 6 (lower is better)
Translates to: SPHDAIGKRLWV*ALLEFVGLVLQ
Trigger: CTGGAGTACCAGGCCTACGAACTCCAAGAGTGCCCAGACCCAGAGCCTTTTGCCAATGGCATCGTGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CACTCCAGAGTCCATTGGCCATGCACTCCCGCACCCTaGAGCCCACCAGTGTATATCCGGAATTGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: HSRVHWPCTPAP*SPPVYIRNCRR
Trigger: TCTCCTGCAATTCCGGATATACACTGGTGGGCTCCAGGGTGCGGGAGTGCATGGCCAATGGACTCTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GGGTTCCACTCCAGGTCAGGTTGGGAAGGCAGGTCCTaGTGGTGGATCCCTGAAGCAGGTAACCTTTCTGAC +
Preference number: 6 (lower is better)
Translates to: GFHSRSGWEGRS*WWIPEAGNLSD
Trigger: GTCAGAAAGGTTACCTGCTTCAGGGATCCACCACCAGGACCTGCCTTCCCAACCTGACCTGGAGTGGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp TCCCATTCTGCGGGACTCCCGGGTCATTGCAGGAGGTaGCGGTGGACACTGAGAACTGGATGGCAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: SHSAGLPGHCRR*RWTLRTGWQSL
Trigger: AAGGCTTTGCCATCCAGTTCTCAGTGTCCACCGCAACCTCCTGCAATGACCCGGGAGTCCCGCAGAATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CCAAGCTTCAGGTCGGAGCCCACTCGAGTGCCGTTCTaGATCGAACCAGGGTCAAAACAGGACTCCCTTGGG +
Preference number: 6 (lower is better)
Translates to: PSFRSEPTRVPF*IEPGSKQDSLG
Trigger: CCCAAGGGAGTCCTGTTTTGACCCTGGTTCGATCAAGAACGGCACTCGAGTGGGCTCCGACCTGAAGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CGGACACTGTTCTCCTGGTGCCCGGGATCCGTACAGTaGATGATTCTGCAGGTAGGCAGTGTGTCGCTCCAC +
Preference number: 6 (lower is better)
Translates to: RTLFSWCPGSVQ*MILQVGSVSLH
Trigger: GTGGAGCGACACACTGCCTACCTGCAGAATCATCAACTGTACGGATCCCGGGCACCAGGAGAACAGTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CACAACGGCCCCCACTATGTAGCTGTCTCCAGACATTaGGGCATGAGGTGGAGAGCCAGGATGGCCACAGGA +
Preference number: 6 (lower is better)
Translates to: HNGPHYVAVSRH*GMRWRARMATG
Trigger: TCCTGTGGCCATCCTGGCTCTCCACCTCATGCCCAAATGTCTGGAGACAGCTACATAGTGGGGGCCGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp TCCACCCCACTGTGGTCGATCATGGTGGCGTTGACCTaGCTGTTGGCTACCTGGAAGCCGGTGACTCTAAGC +
Preference number: 6 (lower is better)
Translates to: STPLWSIMVALT*LLATWKPVTLS
Trigger: GCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCATGATCGACCACAGTGGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 72 bp TGCAGTTCCACCCCACTGTGGTCGATCATGGTGGCGTaGACCTTGCTGTTGGCTACCTGGAAGCCGGTGACT +
Preference number: 6 (lower is better)
Translates to: CSSTPLWSIMVA*TLLLATWKPVT
Trigger: AGTCACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCATGATCGACCACAGTGGGGTGGAACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 90 bp ACGGAACTGGAGAACACCAGGCCATCGCTGAACACCACTCGGGCATaGCTTGGAGTTCCGGGGTTCCCACATGAGATCACTCCACACTCA +
Preference number: 6 (lower is better)
Translates to: TELENTRPSLNTTRA*LGVPGFPHEITPHS
Trigger: TGAGTGTGGAGTGATCTCATGTGGGAACCCCGGAACTCCAAGCAATGCCCGAGTGGTGTTCAGCGATGGCCTGGTGTTCTCCAGTTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp AAATGCAGTTCCACCCCACTGTGGTCGATCATGGTGGCGTTGACCTaGCTGTTGGCTACCTGGAAGCCGGTGACTCTAAGCATGGCTGGC +
Preference number: 6 (lower is better)
Translates to: KCSSTPLWSIMVALT*LLATWKPVTLSMAG
Trigger: GCCAGCCATGCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCATGATCGACCACAGTGGGGTGGAACTGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 90 bp CCTGCCAAATGCAGTTCCACCCCACTGTGGTCGATCATGGTGGCGTaGACCTTGCTGTTGGCTACCTGGAAGCCGGTGACTCTAAGCATG +
Preference number: 6 (lower is better)
Translates to: PAKCSSTPLWSIMVA*TLLLATWKPVTLSM
Trigger: CATGCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCATGATCGACCACAGTGGGGTGGAACTGCATTTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 90 bp TCTTTGAAAGCCGAACTGCCCAAAGCCTTGGCCCTTGACGGAGCCTaGGTAGACGAAGGTGCCTCCAGAAGACTCCGAGGAAACATGGCC +
Preference number: 6 (lower is better)
Translates to: SLKAELPKALALDGA*VDEGASRRLRGNMA
Trigger: GGCCATGTTTCCTCGGAGTCTTCTGGAGGCACCTTCGTCTACCAAGGCTCCGTCAAGGGCCAAGGCTTTGGGCAGTTCGGCTTTCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 72 bp CAAGCTTCAGGTCGGAGCCCACTCGAGTGCCGTTCTTaGTCGAACCAGGGTCAAAACAGGACTCCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: QASGRSPLECRS*SNQGQNRTPLG
Trigger: ACCCAAGGGAGTCCTGTTTTGACCCTGGTTCGATCAAGAACGGCACTCGAGTGGGCTCCGACCTGAAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CCTGCAGGGCATAGCCTGAGTTGCATTCAAAGCGAATaGTGGCCCCCACGGAGAAGTCACTGCCAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: PAGHSLSCIQSE*WPPRRSHCQAS
Trigger: AGAGGCTTGGCAGTGACTTCTCCGTGGGGGCCATCATTCGCTTTGAATGCAACTCAGGCTATGCCCTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CCCTTTGGCCCGTGTAGTAGTAGCCAGGGTCACAGATaGGCATCAGCTGGGCCTGGAACTGATACTGGGTCT +
Preference number: 6 (lower is better)
Translates to: PFGPCSSSQGHR*ASAGPGTDTGS
Trigger: AGACCCAGTATCAGTTCCAGGCCCAGCTGATGCTCATCTGTGACCCTGGCTACTACTACACGGGCCAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CATAGACAACGGAACTGGAGAACACCAGGCCATCGCTaGACACCACTCGGGCATTGCTTGGAGTTCCGGGGT +
Preference number: 6 (lower is better)
Translates to: HRQRNWRTPGHR*TPLGHCLEFRG
Trigger: ACCCCGGAACTCCAAGCAATGCCCGAGTGGTGTTCAGCGATGGCCTGGTGTTCTCCAGTTCCGTTGTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GTCTTTGAAAGCCGAACTGCCCAAAGCCTTGGCCCTTaGCGGAGCCTTGGTAGACGAAGGTGCCTCCAGAAG +
Preference number: 6 (lower is better)
Translates to: VFESRTAQSLGP*RSLGRRRCLQK
Trigger: CTTCTGGAGGCACCTTCGTCTACCAAGGCTCCGTCAAGGGCCAAGGCTTTGGGCAGTTCGGCTTTCAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 72 bp TCTAATGCAAAGGACTGGAACACGAGCTGGATCCTGTaGTGGTCCTCCGCGGTGATGGTCCACGTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: SNAKDWNTSWIL*WSSAVMVHVQL
Trigger: CAACTGCACGTGGACCATCACCGCGGAGGACCAGCACAGGATCCAGCTCGTGTTCCAGTCCTTTGCATTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp AACTTCATAGCTGGCACGGAAGCCCTGGGCACTGACTaGATAGTCGCTGATGAGGCTCAGGGACAAGGTGCT +
Preference number: 6 (lower is better)
Translates to: NFIAGTEALGTD*IVADEAQGQGA
Trigger: AGCACCTTGTCCCTGAGCCTCATCAGCGACTATGCAGTCAGTGCCCAGGGCTTCCGTGCCAGCTATGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp GAAGAATCGGTTCTGGATCTTCACGCAGCTGATCTCTaGGCTCCCCTGCAGAGCATAGCCTGGGTCACACTG +
Preference number: 6 (lower is better)
Translates to: EESVLDLHAADL*APLQSIAWVTL
Trigger: CAGTGTGACCCAGGCTATGCTCTGCAGGGGAGCGCAGAGATCAGCTGCGTGAAGATCCAGAACCGATTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp ATGTTGAAACCCCTCTTCCCTGTGGAGTGGTCAGTCTaGAACTCTAGACGGGCCACATGGCCACTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: MLKPLFPVEWSV*NSRRATWPLLV
Trigger: CACCAGCAGTGGCCATGTGGCCCGTCTAGAGTTCCAGACTGACCACTCCACAGGGAAGAGGGGTTTCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GCGCTCTCCTGTCTTCACCCCATTGCTGGGTACAGCTaGTTCGGGACAACTGCTCAAGCCCACGGTCTTATA +
Preference number: 6 (lower is better)
Translates to: ALSCLHPIAGYS*FGTTAQAHGLI
Trigger: TATAAGACCGTGGGCTTGAGCAGTTGTCCCGAACCAGCTGTACCCAGCAATGGGGTGAAGACAGGAGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp AGCTTGAATCCTGGCCGGTTCTGGGAATGGTCGCTGTaGAAGTACACGATGCTATCGTGGGACGTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: SLNPGRFWEWSL*KYTMLSWDVES
Trigger: GCTCTCCACGTCCCACGATAGCATCGTGTACTTCCACAGCGACCATTCCCAGAACCGGCCAGGATTCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CTGGCTGCCCTGAGTAAGGCCGTTGACTGGATTGCCTaGGTGTCCACAGGTAATTGGCACACAGAAAGGGGT +
Preference number: 6 (lower is better)
Translates to: LAALSKAVDWIA*VSTGNWHTERG
Trigger: ACCCCTTTCTGTGTGCCAATTACCTGTGGACACCCAGGCAATCCAGTCAACGGCCTTACTCAGGGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TGCAAACCGGCTTGGTACCGTTCCAGGTCCGGTCCTTaGTGCAGCTCAGCACAGACACTCTGTGTGATTCCA +
Preference number: 6 (lower is better)
Translates to: CKPAWYRSRSGP*CSSAQTLCVIP
Trigger: TGGAATCACACAGAGTGTCTGTGCTGAGCTGCACCAAGGACCGGACCTGGAACGGTACCAAGCCGGTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GTATTCCAAACTGCGGCATGCCAGGATCTGCACATGTaGTCAGCGTGGGATCTATGCAGCTGGGCTGTGTGC +
Preference number: 6 (lower is better)
Translates to: VFQTAACQDLHM*SAWDLCSWAVC
Trigger: GCACACAGCCCAGCTGCATAGATCCCACGCTGACCACATGTGCAGATCCTGGCATGCCGCAGTTTGGAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TCGATCATGGTGGCGTTGACCTTGCTGTTGGCTACCTaGAAGCCGGTGACTCTAAGCATGGCTGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SIMVALTLLLAT*KPVTLSMAGCF
Trigger: GAAGCAGCCAGCCATGCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCATGATCGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 72 bp GCTGCCACTGCTGTCACTCTGGAAGAGGAGCCACATTaGATGGTGTGTGCTGACGATGAGGTCTGGGACGGA +
Preference number: 6 (lower is better)
Translates to: AATAVTLEEEPH*MVCADDEVWDG
Trigger: TCCGTCCCAGACCTCATCGTCAGCACACACCATCAAATGTGGCTCCTCTTCCAGAGTGACAGCAGTGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CTTCACAGCTGGGCAGGGCGTGACTCCACTGGAAATTaGGCTCACACTCCAGGGGCTCCCCATCACTTAATG +
Preference number: 6 (lower is better)
Translates to: LHSWAGRDSTGN*AHTPGAPHHLM
Trigger: CATTAAGTGATGGGGAGCCCCTGGAGTGTGAGCCAAATTTCCAGTGGAGTCACGCCCTGCCCAGCTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp GAGAACACCAGGCCATCGCTGAACACCACTCGGGCATaGCTTGGAGTTCCGGGGTTCCCACATGAGATCACT +
Preference number: 6 (lower is better)
Translates to: ENTRPSLNTTRA*LGVPGFPHEIT
Trigger: AGTGATCTCATGTGGGAACCCCGGAACTCCAAGCAATGCCCGAGTGGTGTTCAGCGATGGCCTGGTGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp TTGCAAACCGGCTTGGTACCGTTCCAGGTCCGGTCCTaGGTGCAGCTCAGCACAGACACTCTGTGTGATTCC +
Preference number: 6 (lower is better)
Translates to: LQTGLVPFQVRS*VQLSTDTLCDS
Trigger: GGAATCACACAGAGTGTCTGTGCTGAGCTGCACCAAGGACCGGACCTGGAACGGTACCAAGCCGGTTTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CCACTGTGGTCGATCATGGTGGCGTTGACCTTGCTGTaGGCTACCTGGAAGCCGGTGACTCTAAGCATGGCT +
Preference number: 6 (lower is better)
Translates to: PLWSIMVALTLL*ATWKPVTLSMA
Trigger: AGCCATGCTTAGAGTCACCGGCTTCCAGGTAGCCAACAGCAAGGTCAACGCCACCATGATCGACCACAGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 72 bp GAGGTCAAGTCTTTGAAAGCCGAACTGCCCAAAGCCTaGGCCCTTGACGGAGCCTTGGTAGACGAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: EVKSLKAELPKA*ALDGALVDEGA
Trigger: GGCACCTTCGTCTACCAAGGCTCCGTCAAGGGCCAAGGCTTTGGGCAGTTCGGCTTTCAAAGACTTGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 72 bp GCAGTACACACCGTGCTGACTGTGAACTCCGCCTCGTaGCTCATGATGTCTGTGGGCTGGATGTTGCGGTCA +
Preference number: 6 (lower is better)
Translates to: AVHTVLTVNSAS*LMMSVGWMLRS
Trigger: TGACCGCAACATCCAGCCCACAGACATCATGAGCAACGAGGCGGAGTTCACAGTCAGCACGGTGTGTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 90 bp CAACAGCCTGAGGTCAAGTCTTTGAAAGCCGAACTGCCCAAAGCCTaGGCCCTTGACGGAGCCTTGGTAGACGAAGGTGCCTCCAGAAGA +
Preference number: 6 (lower is better)
Translates to: QQPEVKSLKAELPKA*ALDGALVDEGASRR
Trigger: TCTTCTGGAGGCACCTTCGTCTACCAAGGCTCCGTCAAGGGCCAAGGCTTTGGGCAGTTCGGCTTTCAAAGACTTGACCTCAGGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 72 bp CACCTGGGTCCCATGGTAAACGCCAATCAAAGGTGCTaGGTATGTCCGTCCATCTCGCACTTCCAGGGTGTC +
Preference number: 6 (lower is better)
Translates to: HLGPMVNANQRC*VCPSISHFQGV
Trigger: GACACCCTGGAAGTGCGAGATGGACGGACATACTCAGCACCTTTGATTGGCGTTTACCATGGGACCCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp TGCGGCTGGGGAGCTGTGAGCCATAGAAGCTTCCTATaGGAGGGCTCAGAGAGTCCCTTCCATCGTAGATGT +
Preference number: 6 (lower is better)
Translates to: CGWGAVSHRSFL*EGSESPFHRRC
Trigger: ACATCTACGATGGAAGGGACTCTCTGAGCCCTCTCATAGGAAGCTTCTATGGCTCACAGCTCCCCAGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GCTGTTGCTGCTGCTTTCAATGCGGCTGGGGAGCTGTaGGCCATAGAAGCTTCCTATGAGAGGGCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: AVAAAFNAAGEL*AIEASYERAQR
Trigger: TCTCTGAGCCCTCTCATAGGAAGCTTCTATGGCTCACAGCTCCCCAGCCGCATTGAAAGCAGCAGCAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp AACTTGACCACGTCGTTGAGGTTGAACTGGCTGCCCTaGGTAAGGCCGTTGACTGGATTGCCTGGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: NLTTSLRLNWLP*VRPLTGLPGCP
Trigger: TGGACACCCAGGCAATCCAGTCAACGGCCTTACTCAGGGCAGCCAGTTCAACCTCAACGACGTGGTCAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CCGGTCCTTGGTGCAGCTCAGCACAGACACTCTGTGTaGTTCCATCACATAGCCGGGGACACACTGGTATGT +
Preference number: 6 (lower is better)
Translates to: PVLGAAQHRHSV*FHHIAGDTLVC
Trigger: ACATACCAGTGTGTCCCCGGCTATGTGATGGAATCACACAGAGTGTCTGTGCTGAGCTGCACCAAGGACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GTTGGAAGCAAAGTGCCGGCCGATGGACTCGGGATCTaGCTCCAACAGCCTGAGGTCAAGTCTTTGAAAGCC +
Preference number: 6 (lower is better)
Translates to: VGSKVPADGLGI*LQQPEVKSLKA
Trigger: GGCTTTCAAAGACTTGACCTCAGGCTGTTGGAGTCAGATCCCGAGTCCATCGGCCGGCACTTTGCTTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS GCA 72 bp AAACCGGCTTGGTACCGTTCCAGGTCCGGTCCTTGGTaGAGCTCAGCACAGACACTCTGTGTGATTCCATCA +
Preference number: 6 (lower is better)
Translates to: KPAWYRSRSGPW*SSAQTLCVIPS
Trigger: TGATGGAATCACACAGAGTGTCTGTGCTGAGCTGCACCAAGGACCGGACCTGGAACGGTACCAAGCCGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp GCTGTTCTGTATTCCAAACTGCGGCATGCCAGGATCTaGACATGTGGTCAGCGTGGGATCTATGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: AVLYSKLRHARI*TCGQRGIYAAG
Trigger: CCCAGCTGCATAGATCCCACGCTGACCACATGTGCAGATCCTGGCATGCCGCAGTTTGGAATACAGAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TCACCAAATAGCGCTCTCCTGTCTTCACCCCATTGCTaGGTACAGCTGGTTCGGGACAACTGCTCAAGCCCA +
Preference number: 6 (lower is better)
Translates to: SPNSALLSSPHC*VQLVRDNCSSP
Trigger: TGGGCTTGAGCAGTTGTCCCGAACCAGCTGTACCCAGCAATGGGGTGAAGACAGGAGAGCGCTATTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CGGAGGGGCCGCTCCGGATTTCTAAGAAGTCGTGGTTaGGCTCCGTGGAGAAGTTCAAAAACTGGATGTGAG +
Preference number: 6 (lower is better)
Translates to: RRGRSGFLRSRG*APWRSSKTGCE
Trigger: CTCACATCCAGTTTTTGAACTTCTCCACGGAGCCCAACCACGACTTCTTAGAAATCCGGAGCGGCCCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GTCTCGGAGGGGCCGCTCCGGATTTCTAAGAAGTCGTaGTTGGGCTCCGTGGAGAAGTTCAAAAACTGGATG +
Preference number: 6 (lower is better)
Translates to: VSEGPLRISKKS*LGSVEKFKNWM
Trigger: CATCCAGTTTTTGAACTTCTCCACGGAGCCCAACCACGACTTCTTAGAAATCCGGAGCGGCCCCTCCGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TGGTACTCCAGCTTGAATCCTGGCCGGTTCTGGGAATaGTCGCTGTGGAAGTACACGATGCTATCGTGGGAC +
Preference number: 6 (lower is better)
Translates to: WYSSLNPGRFWE*SLWKYTMLSWD
Trigger: GTCCCACGATAGCATCGTGTACTTCCACAGCGACCATTCCCAGAACCGGCCAGGATTCAAGCTGGAGTACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TTGGAGTTCGTAGGCCTGGTACTCCAGCTTGAATCCTaGCCGGTTCTGGGAATGGTCGCTGTGGAAGTACAC +
Preference number: 6 (lower is better)
Translates to: LEFVGLVLQLES*PVLGMVAVEVH
Trigger: GTGTACTTCCACAGCGACCATTCCCAGAACCGGCCAGGATTCAAGCTGGAGTACCAGGCCTACGAACTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CTCATTGGTCGGGCAGTGCACTTCGCATATTGGGGGTaGACCTTCAAACTGCAGGTAGGTTCCCAGCTTGCA +
Preference number: 6 (lower is better)
Translates to: LIGRAVHFAYWG*TFKLQVGSQLA
Trigger: TGCAAGCTGGGAACCTACCTGCAGTTTGAAGGTCCACCCCCAATATGCGAAGTGCACTGCCCGACCAATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TTCCACTCCAGGTCAGGTTGGGAAGGCAGGTCCTGGTaGTGGATCCCTGAAGCAGGTAACCTTTCTGACAAC +
Preference number: 6 (lower is better)
Translates to: FHSRSGWEGRSW*WIPEAGNLSDN
Trigger: GTTGTCAGAAAGGTTACCTGCTTCAGGGATCCACCACCAGGACCTGCCTTCCCAACCTGACCTGGAGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CACCAGAGCACCCACATAGAAGTCATTTCCATGACGTaGCCCATTGACGGGGATGCCTGGGTCCAGACAGTG +
Preference number: 6 (lower is better)
Translates to: HQSTHIEVISMT*PIDGDAWVQTV
Trigger: CACTGTCTGGACCCAGGCATCCCCGTCAATGGGCAACGTCATGGAAATGACTTCTATGTGGGTGCTCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp GATGCCATTGGCAAAAGGCTCTGGGTCTGGGCACTCTaGGAGTTCGTAGGCCTGGTACTCCAGCTTGAATCC +
Preference number: 6 (lower is better)
Translates to: DAIGKRLWVWAL*EFVGLVLQLES
Trigger: GGATTCAAGCTGGAGTACCAGGCCTACGAACTCCAAGAGTGCCCAGACCCAGAGCCTTTTGCCAATGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp GTTGAATCCCTCATAGGACATGGAGAAATCAGAGATGAAGCGGACTaGAGCGGTGAAGTTGCCATAGAGCCCGGCACTGATGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: VESLIGHGEIRDEAD*SGEVAIEPGTDGGW
Trigger: CCAGCCCCCATCAGTGCCGGGCTCTATGGCAACTTCACCGCTCAAGTCCGCTTCATCTCTGATTTCTCCATGTCCTATGAGGGATTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp ACTGTGAACTCCGCCTCGTTGCTCATGATGTCTGTGGGCTGGATGTaGCGGTCATACATGGGGTTCTCAAATGTGGCCCGCACGTTTGTG +
Preference number: 6 (lower is better)
Translates to: TVNSASLLMMSVGWM*RSYMGFSNVARTFV
Trigger: CACAAACGTGCGGGCCACATTTGAGAACCCCATGTATGACCGCAACATCCAGCCCACAGACATCATGAGCAACGAGGCGGAGTTCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS TCA 72 bp CCCATTGACGGGGATGCCTGGGTCCAGACAGTGGTCTaGCTGCAGTGTAATAGTCTCATAGCGGAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: PIDGDAWVQTVV*LQCNSLIAELK
Trigger: TTTCAGCTCCGCTATGAGACTATTACACTGCAGTCAGACCACTGTCTGGACCCAGGCATCCCCGTCAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp CACCCACATAGAAGTCATTTCCATGACGTTGCCCATTaGCGGGGATGCCTGGGTCCAGACAGTGGTCTGACT +
Preference number: 6 (lower is better)
Translates to: HPHRSHFHDVAH*RGCLGPDSGLT
Trigger: AGTCAGACCACTGTCTGGACCCAGGCATCCCCGTCAATGGGCAACGTCATGGAAATGACTTCTATGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp AGGAGCTGTGTGCTATTTTCTTGGACAAACTCCGGGTaGAGACCCCAAGCTGCAGAGATGTCTGCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: RSCVLFSWTNSG*RPQAAEMSAVA
Trigger: GGCCACAGCAGACATCTCTGCAGCTTGGGGTCTTCACCCGGAGTTTGTCCAAGAAAATAGCACACAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GTGGAGTGGAGCCTTAGGCAGGCTGCAGTAGGGGGCTaGATACCGAATCTTAAAACCCTTCCGGTTATAGGC +
Preference number: 6 (lower is better)
Translates to: VEWSLRQAAVGG*IPNLKTLPVIG
Trigger: GCCTATAACCGGAAGGGTTTTAAGATTCGGTATTCAGCCCCCTACTGCAGCCTGCCTAAGGCTCCACTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp ATAGACCTTGAGGAGGTCTCCTTCAGCGAGCTCAAATaGCTTGGCTTTAAGCTGAATCCCCTTCCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: IDLEEVSFSELK*LGFKLNPLPRL
Trigger: CAGCCGGGGAAGGGGATTCAGCTTAAAGCCAAGGCATTTGAGCTCGCTGAAGGAGACCTCCTCAAGGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp AGTCTGGAGAGACGGTCACTTTCCAGTCACACTCCTTaGCTGGTGGGTAGGGTTCTGGGTAGTTTGGTGACA +
Preference number: 6 (lower is better)
Translates to: SLERRSLSSHTP*LVGRVLGSLVT
Trigger: TGTCACCAAACTACCCAGAACCCTACCCACCAGGCAAGGAGTGTGACTGGAAAGTGACCGTCTCTCCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp TGTGTAGTCAATAACGAAGCCAGCATTGCTCACAGATaGGTCGCTGCGGAAGGCGAGGAAGAGGCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: CVVNNEASIAHR*VAAEGEEEAVA
Trigger: AGCAACAGCCTCTTCCTCGCCTTCCGCAGCGACGCATCTGTGAGCAATGCTGGCTTCGTTATTGACTACACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp ATTTTCTTGGACAAACTCCGGGTGAAGACCCCAAGCTaGAGAGATGTCTGCTGTGGCCCATCCCAGACAGTG +
Preference number: 6 (lower is better)
Translates to: IFLDKLRVKTPS*RDVCCGPSQTV
Trigger: CACTGTCTGGGATGGGCCACAGCAGACATCTCTGCAGCTTGGGGTCTTCACCCGGAGTTTGTCCAAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp AGCCTTGGGAGCTGTTCTGTATTCCAAACTGCGGCATaGCAGGATCTGCACATGTGGTCAGCGTGGGATCTA +
Preference number: 6 (lower is better)
Translates to: SLGSCSVFQTAA*QDLHMWSAWDL
Trigger: TAGATCCCACGCTGACCACATGTGCAGATCCTGGCATGCCGCAGTTTGGAATACAGAACAGCTCCCAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GATAGGACATCAAAGTCCTCCTCTAATGCAAAGGACTaGAACACGAGCTGGATCCTGTGCTGGTCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: DRTSKSSSNAKD*NTSWILCWSSA
Trigger: CGCGGAGGACCAGCACAGGATCCAGCTCGTGTTCCAGTCCTTTGCATTAGAGGAGGACTTTGATGTCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GAGCCACATTTGATGGTGTGTGCTGACGATGAGGTCTaGGACGGAGGTACCTGTCAGGATGTAGAGGACTGT +
Preference number: 6 (lower is better)
Translates to: EPHLMVCADDEV*DGGTCQDVEDC
Trigger: ACAGTCCTCTACATCCTGACAGGTACCTCCGTCCCAGACCTCATCGTCAGCACACACCATCAAATGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp TCCATCGTGAACCTTGTAGCCGAACTGTGGGGTCCCTaGGTCCTCACATCGGATGAGCTCGAAACTAGAGAA +
Preference number: 6 (lower is better)
Translates to: SIVNLVAELWGP*VLTSDELETRE
Trigger: TTCTCTAGTTTCGAGCTCATCCGATGTGAGGACCCAGGGACCCCACAGTTCGGCTACAAGGTTCACGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp AAAATGACCTCCATCGTGAACCTTGTAGCCGAACTGTaGGGTCCCTGGGTCCTCACATCGGATGAGCTCGAA +
Preference number: 6 (lower is better)
Translates to: KMTSIVNLVAEL*GPWVLTSDELE
Trigger: TTCGAGCTCATCCGATGTGAGGACCCAGGGACCCCACAGTTCGGCTACAAGGTTCACGATGGAGGTCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CTTTCCACAGGTCCATCCCAGATGCGCAGCACATCGTaGACTTCTTCTGTGTCAAACACCAGGAAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: LSTGPSQMRSTS*TSSVSNTRKWS
Trigger: GCTCCACTTCCTGGTGTTTGACACAGAAGAAGTCCACGATGTGCTGCGCATCTGGGATGGACCTGTGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GTCCAACATTATAGCCAGCTCCCCTCACGATGCCATTaGCAAAAGGCTCTGGGTCTGGGCACTCTTGGAGTT +
Preference number: 6 (lower is better)
Translates to: VQHYSQLPSRCH*QKALGLGTLGV
Trigger: AACTCCAAGAGTGCCCAGACCCAGAGCCTTTTGCCAATGGCATCGTGAGGGGAGCTGGCTATAATGTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp GTCGCTCACTTTCATGCAGGTGATTCTCTTGGACCCTaGCAGGTCATAGCCCTCGTTGCAGGTGAACTGGAC +
Preference number: 6 (lower is better)
Translates to: VAHFHAGDSLGP*QVIALVAGELD
Trigger: GTCCAGTTCACCTGCAACGAGGGCTATGACCTGCAAGGGTCCAAGAGAATCACCTGCATGAAAGTGAGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CTAAGGATCACTCCAGTGGAGTCTGTCAGAAGCTCATaGGTCGGGCAGTGCACTTCGCATATTGGGGGTGGA +
Preference number: 6 (lower is better)
Translates to: LRITPVESVRSS*VGQCTSHIGGG
Trigger: TCCACCCCCAATATGCGAAGTGCACTGCCCGACCAATGAGCTTCTGACAGACTCCACTGGAGTGATCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp TGGGACCTCGCAGCCCCCTCAGCTATGTATCCTGGGTaGCAAATGAACTTGACCACGTCGTTGAGGTTGAAC +
Preference number: 6 (lower is better)
Translates to: WDLAAPSAMYPG*QMNLTTSLRLN
Trigger: GTTCAACCTCAACGACGTGGTCAAGTTCATTTGCAACCCAGGATACATAGCTGAGGGGGCTGCGAGGTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp TGCAAACATGTCGCTCACTTTCATGCAGGTGATTCTCTTGGACCCTaGCAGGTCATAGCCCTCGTTGCAGGTGAACTGGACGCTGGATCC +
Preference number: 6 (lower is better)
Translates to: CKHVAHFHAGDSLGP*QVIALVAGELDAGS
Trigger: GGATCCAGCGTCCAGTTCACCTGCAACGAGGGCTATGACCTGCAAGGGTCCAAGAGAATCACCTGCATGAAAGTGAGCGACATGTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GGGTACCGCTTGGTAGACAAAGTGGAACCCCCGGGCTaGTACTTGACCTTTGGCGCTAAACTTGATGAGAAC +
Preference number: 6 (lower is better)
Translates to: GYRLVDKVEPPG*YLTFGAKLDEN
Trigger: GTTCTCATCAAGTTTAGCGCCAAAGGTCAAGTATCAGCCCGGGGGTTCCACTTTGTCTACCAAGCGGTACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CTGATTGTCCAACATTATAGCCAGCTCCCCTCACGATaGCATTGGCAAAAGGCTCTGGGTCTGGGCACTCTT +
Preference number: 6 (lower is better)
Translates to: LIVQHYSQLPSR*HWQKALGLGTL
Trigger: AAGAGTGCCCAGACCCAGAGCCTTTTGCCAATGGCATCGTGAGGGGAGCTGGCTATAATGTTGGACAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp AAGGAAGTACTCCACCGTGATCGAGATATTGTACTCTaGCTCAACCCTCACCAGCCAGGAGCAGGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: KEVLHRDRDIVL*LNPHQPGAGLE
Trigger: TTCCAGACCTGCTCCTGGCTGGTGAGGGTTGAGCCAGAGTACAATATCTCGATCACGGTGGAGTACTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GTGAACTCCGCCTCGTTGCTCATGATGTCTGTGGGCTaGATGTTGCGGTCATACATGGGGTTCTCAAATGTG +
Preference number: 6 (lower is better)
Translates to: VNSASLLMMSVG*MLRSYMGFSNV
Trigger: CACATTTGAGAACCCCATGTATGACCGCAACATCCAGCCCACAGACATCATGAGCAACGAGGCGGAGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CAA 72 bp GGGCACTCATTATGTCGGAAGGTGGTAAAGGTGATGTaGAAACCCCTCTTCCCTGTGGAGTGGTCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: GHSLCRKVVKVM*KPLFPVEWSVW
Trigger: CCAGACTGACCACTCCACAGGGAAGAGGGGTTTCAACATCACCTTTACCACCTTCCGACATAATGAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp ATGTTGAATTCTTCGTTCTCTGTGACCACTTCAGCATaGGGGAGGATGGTCGGGGGAGGGCACTTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: MLNSSFSVTTSA*GRMVGGGHLVS
Trigger: ACTCACCAAGTGCCCTCCCCCGACCATCCTCCCCAATGCTGAAGTGGTCACAGAGAACGAAGAATTCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp TTCTCGCTAAGGAAGTACTCCACCGTGATCGAGATATaGTACTCTGGCTCAACCCTCACCAGCCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: FSLRKYSTVIEI*YSGSTLTSQEQ
Trigger: CTGCTCCTGGCTGGTGAGGGTTGAGCCAGAGTACAATATCTCGATCACGGTGGAGTACTTCCTTAGCGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp TCATACTGCTTCTCGCTAAGGAAGTACTCCACCGTGATCGAGATATaGTACTCTGGCTCAACCCTCACCAGCCAGGAGCAGGTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SYCFSLRKYSTVIEI*YSGSTLTSQEQVWN
Trigger: GTTCCAGACCTGCTCCTGGCTGGTGAGGGTTGAGCCAGAGTACAATATCTCGATCACGGTGGAGTACTTCCTTAGCGAGAAGCAGTATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 90 bp CCTTCATTGCAGCTGTACACAGCCTTAGTCCCCACGGTGTACTCCTaGCCAAACACAATTCCATTTTTGGGAGCATCAGGGAGACCACAG +
Preference number: 6 (lower is better)
Translates to: PSLQLYTALVPTVYS*PNTIPFLGASGRPQ
Trigger: CTGTGGTCTCCCTGATGCTCCCAAAAATGGAATTGTGTTTGGCAAGGAGTACACCGTGGGGACTAAGGCTGTGTACAGCTGCAATGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp TCCATGCTGCAAACATGTCGCTCACTTTCATGCAGGTaGTTCTCTTGGACCCTTGCAGGTCATAGCCCTCGT +
Preference number: 6 (lower is better)
Translates to: SMLQTCRSLSCR*FSWTLAGHSPR
Trigger: ACGAGGGCTATGACCTGCAAGGGTCCAAGAGAATCACCTGCATGAAAGTGAGCGACATGTTTGCAGCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GCTCCCCATCACTTAATGTGTAGCCCGAGTCACAGCTaGAGGTCACCAGAGCACCCACATAGAAGTCATTTC +
Preference number: 6 (lower is better)
Translates to: APHHLMCSPSHS*RSPEHPHRSHF
Trigger: GAAATGACTTCTATGTGGGTGCTCTGGTGACCTTCAGCTGTGACTCGGGCTACACATTAAGTGATGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp GAAGCAGGTAACCTTTCTGACAACGGAATAGCACCGTaGTCCCAACCTGATAGCCTTGGGAGCTGTTCTGTA +
Preference number: 6 (lower is better)
Translates to: EAGNLSDNGIAP*SQPDSLGSCSV
Trigger: TACAGAACAGCTCCCAAGGCTATCAGGTTGGGAGCACGGTGCTATTCCGTTGTCAGAAAGGTTACCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GGGCTGGTACTGTTGTTCCCGAGAAACTCCCCAGCATaGTTACGGTGTTATCTGCTCCGTCAAACACTTCTA +
Preference number: 6 (lower is better)
Translates to: GLVLLFPRNSPA*LRCYLLRQTLL
Trigger: TAGAAGTGTTTGACGGAGCAGATAACACCGTAACCATGCTGGGGAGTTTCTCGGGAACAACAGTACCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp CGCTCCGGATTTCTAAGAAGTCGTGGTTGGGCTCCGTaGAGAAGTTCAAAAACTGGATGTGAGCACCAAAGC +
Preference number: 6 (lower is better)
Translates to: RSGFLRSRGWAP*RSSKTGCEHQS
Trigger: GCTTTGGTGCTCACATCCAGTTTTTGAACTTCTCCACGGAGCCCAACCACGACTTCTTAGAAATCCGGAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp CAGCTGTACACAGCCTTAGTCCCCACGGTGTACTCCTaGCCAAACACAATTCCATTTTTGGGAGCATCAGGG +
Preference number: 6 (lower is better)
Translates to: QLYTALVPTVYS*PNTIPFLGASG
Trigger: CCCTGATGCTCCCAAAAATGGAATTGTGTTTGGCAAGGAGTACACCGTGGGGACTAAGGCTGTGTACAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CAA 72 bp GAGGAAACATGGCCATCTAACGCCCAGTGGTCATCTTaGAACTTATTCACAAAGCTCTCCACAGGCCCCGTG +
Preference number: 6 (lower is better)
Translates to: EETWPSNAQWSS*NLFTKLSTGPV
Trigger: CACGGGGCCTGTGGAGAGCTTTGTGAATAAGTTCAAAGATGACCACTGGGCGTTAGATGGCCATGTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000184063.3
ENSMUST00000221199.2
CDS CCA 72 bp CAGGAAAACACACAGCCTGGCTTCTTAGCCGACCACTaGTTATTCTTTTGGCACGTGATTGATTTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: QENTQPGFLADH*LFFWHVIDFCP
Trigger: GGGGCAGAAATCAATCACGTGCCAAAAGAATAACCAGTGGTCGGCTAAGAAGCCAGGCTGTGTGTTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp TGTCAGAGTAGAAGTGGAGATAGAGTTGATTGGAGGTaGTATTCAGGAGGGCTGGTACTGTTGTTCCCGAGA +
Preference number: 6 (lower is better)
Translates to: CQSRSGDRVDWR*YSGGLVLLFPR
Trigger: TCTCGGGAACAACAGTACCAGCCCTCCTGAATAGCACCTCCAATCAACTCTATCTCCACTTCTACTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp CCTGAGGGACCGTCAAAGATCTCAAATTCATCATACTaGTTCTCGCTAAGGAAGTACTCCACCGTGATCGAG +
Preference number: 6 (lower is better)
Translates to: PEGPSKISNSSY*FSLRKYSTVIE
Trigger: CTCGATCACGGTGGAGTACTTCCTTAGCGAGAAGCAGTATGATGAATTTGAGATCTTTGACGGTCCCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GAGTTAACACAGATGTCTTCTGGTTATTGTCCTTGCTaGGCATCAGCTTCACGCCTCGAGACTTCAGCTCAA +
Preference number: 6 (lower is better)
Translates to: ELTQMSSGYCPC*ASASRLETSAQ
Trigger: TTGAGCTGAAGTCTCGAGGCGTGAAGCTGATGCCCAGCAAGGACAATAACCAGAAGACATCTGTGTTAACTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GTTAAATGTGTTAAATACCAGGGCGATGACGTAGTCTaGAGAGACGGTCACTTTCCAGTCACACTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: VKCVKYQGDDVV*RDGHFPVTLLA
Trigger: GGCAAGGAGTGTGACTGGAAAGTGACCGTCTCTCCAGACTACGTCATCGCCCTGGTATTTAACACATTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp GGGTCCTCACATCGGATGAGCTCGAAACTAGAGAACTaGAGTTCAAAGCCTTTGCTGGTGTTTTCTGCATCT +
Preference number: 6 (lower is better)
Translates to: GSSHRMSSKLEN*SSKPLLVFSAS
Trigger: AGATGCAGAAAACACCAGCAAAGGCTTTGAACTTCAGTTCTCTAGTTTCGAGCTCATCCGATGTGAGGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp ACTGGTGAAGTTGAAGAAGCAGGAAAACACACAGCCTaGCTTCTTAGCCGACCACTGGTTATTCTTTTGGCA +
Preference number: 6 (lower is better)
Translates to: TGEVEEAGKHTA*LLSRPLVILLA
Trigger: TGCCAAAAGAATAACCAGTGGTCGGCTAAGAAGCCAGGCTGTGTGTTTTCCTGCTTCTTCAACTTCACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS CCA 72 bp GTTCTTGATCGAACCAGGGTCAAAACAGGACTCCCTTaGGTTTTCTGTGTAGTCAATAACGAAGCCAGCATT +
Preference number: 6 (lower is better)
Translates to: VLDRTRVKTGLP*VFCVVNNEASI
Trigger: AATGCTGGCTTCGTTATTGACTACACAGAAAACCCAAGGGAGTCCTGTTTTGACCCTGGTTCGATCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS GCA 72 bp AGAGAACTGAAGTTCAAAGCCTTTGCTGGTGTTTTCTaGATCTGTGATGAAGTCAAGCCACAAGCTGCTAGA +
Preference number: 6 (lower is better)
Translates to: RELKFKAFAGVF*ICDEVKPQAAR
Trigger: TCTAGCAGCTTGTGGCTTGACTTCATCACAGATGCAGAAAACACCAGCAAAGGCTTTGAACTTCAGTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3
CDS TCA 72 bp TCTGGACACATATTATGTCCTTGGGACACACCAACCTaGGTTAACACAGATGTCTTCTGGTTATTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: SGHILCPWDTPT*VNTDVFWLLSL
Trigger: CAAGGACAATAACCAGAAGACATCTGTGTTAACTCAGGTTGGTGTGTCCCAAGGACATAATATGTGTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184063.3