Pregenerated sensors for CSK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032312Ensembl transcript IDs: ENSMUST00000034863.8, ENSMUST00000215396.2, ENSMUST00000216934.2, ENSMUST00000216979.2, ENSMUST00000217128.2, ENSMUST00000217314.2
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCCCGACAGACGCCTGCCTTGGGCACATGCAAACAGCGCAACATaGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGA | + |
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Preference number: 1 (lower is better) Translates to: APDRRLPWAHANSAT*SSANTGDRGNTGHG Trigger: TCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR CCA 90 bp | GCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTaGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGC | + |
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Preference number: 1 (lower is better) Translates to: AATAHEIQAPDRRLP*AHANSATWSSANTG Trigger: GCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR GCA 90 bp | GGTGAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTaGCTTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACA | + |
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Preference number: 1 (lower is better) Translates to: GERPQHMKSKPPTDA*LGHMQTAQHGQAQT Trigger: TGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR TCA 90 bp | TTGATTCCATCTCACAAGGCGGTGTGGGTGAGCGGCCACAGCACATaGAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LIPSHKAVWVSGHST*NPSPRQTPALGTCK Trigger: TTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTCACCCACACCGCCTTGTGAGATGGAATCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAACCGAGGCCCTGTCCCTaGCGGCCCATGGCCTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: GTGRSEARGLPAGWGSVQPRPCP*RPMALA Trigger: CGCCAAGGCCATGGGCCGGCAGGGACAGGGCCTCGG...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| 3UTR-3UTR GCA 90 bp | AAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGGATGGGGGACGGGCCCGAGGCCCTGTCCCTaGCGGCCCATGGCCTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: KHRRPRQHWTWNTGWGTGPRPCP*RPMALA Trigger: CGCCAAGGCCATGGGCCGGCAGGGACAGGGCCTCGG...GCCCGTCCCCCATCCCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTCCCTGCCGGCCCATaGCCTTGGCGGAGGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: GTGRSEARGLPAGWGSVQVPAGP*PWRRQR Trigger: CCTCTGCCTCCGCCAAGGCCATGGGCCGGCAGGGAC...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTGTCCCTGCCGGCCCATaGCCTTGGCGGAGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RRDRQVRGKRPTSRLGLSVPAGP*PWRRQR Trigger: CCTCTGCCTCCGCCAAGGCCATGGGCCGGCAGGGAC...ACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACCGAATGGTGGGGCCTTaGGGAGGCCAGCTGCACGGC | + |
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Preference number: 2 (lower is better) Translates to: ERPQHMKSKPPTDACLGHRMVGP*GGQLHG Trigger: GCCGTGCAGCTGGCCTCCTCAAGGCCCCACCATTCG...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACGGCCTACCAGCCGGCTaGGGCTCAGTTCAAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: ERPQHMKSKPPTDACLGHGLPAG*GSVQVQ Trigger: CTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCC...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACCTAGGTGGGGTCCCTaGGGGCCAGAAGGGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: ANSATWSSANTGDRGNTGPRWGP*GPEGTG Trigger: GCCTGTCCCTTCTGGCCCCCAGGGACCCCACCTAGG...TCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR CCA 90 bp | GCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAAACAGCGATGCCAGGCCTAGGTaGGGTCCCTGGGGGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: AHEIQAPDRRLPWAHANSDARPR*GPWGPE Trigger: TTCTGGCCCCCAGGGACCCCACCTAGGCCTGGCATC...GCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAACTTGAGGAGGCCAGCTaGACGGCACTCCTCCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: PQHMKSKPPTDACLGHMQLEEAS*TALLLF Trigger: GAACAGGAGGAGTGCCGTGCAGCTGGCCTCCTCAAG...TTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACCCCAAGCCCTATAGGTaGGTCCATGAGAGAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: ERPQHMKSKPPTDACLGHPKPYR*VHERRC Trigger: GCATCTTCTCTCATGGACCCACCTATAGGGCTTGGG...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACAGGCCTACCAGCCGGCTaGGGCTCAGTTCAAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: KQRNMVKRKHRRPRQHWTGLPAG*GSVQVQ Trigger: CTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCC...TGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACACCCAAGCCCTATAGGTaGGTCCATGAGAGAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: KQRNMVKRKHRRPRQHWTPKPYR*VHERRC Trigger: GCATCTTCTCTCATGGACCCACCTATAGGGCTTGGG...TGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCATGGAGTGGTTTATTGATTCCATCTCACAAGGCGGTGTGGGTGAGCGGGTACTTCTTGTAAAATaGCCATTTGCTGGGTACTTT | + |
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Preference number: 2 (lower is better) Translates to: VLMEWFIDSISQGGVGERVLLVK*PFAGYF Trigger: AAAGTACCCAGCAAATGGGCATTTTACAAGAAGTAC...CCGCTCACCCACACCGCCTTGTGAGATGGAATCAATAAACCACTCCATGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR CCA 72 bp | ATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTaGACATGGAACACGGGATGGGGGACGGGCTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: MVKRKHRRPRQH*TWNTGWGTGWG Trigger: ACCCCAGCCCGTCCCCCATCCCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR-3UTR CAA 90 bp | GTCCTCATGGAGTGGTTTATTGATTCCATCTCACAAGGCGGTGTGGGTGAGCGGCGACAGACGCCTGCCTaGGGCACATGCAAACAGCGC | + |
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Preference number: 3 (lower is better) Translates to: VLMEWFIDSISQGGVGERRQTPA*GTCKQR Trigger: GCGCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCG...CCGCTCACCCACACCGCCTTGTGAGATGGAATCAATAAACCACTCCATGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR GCA 72 bp | AATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATaGAAACAGCGCAACATGGTCAAGCGCAAACACAGG | + |
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Preference number: 3 (lower is better) Translates to: NPSPRQTPALGT*KQRNMVKRKHR Trigger: CCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR CCA 72 bp | AGACGCCTGCCTTGGGCACATGCAAACAGCGCAACATaGTCAAGCGCAAACACAGGCGACCGAGGCAACACT | + |
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Preference number: 3 (lower is better) Translates to: RRLPWAHANSAT*SSANTGDRGNT Trigger: AGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAAGGCAGGCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR CCA 72 bp | GCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTaGGCACATGCAAACAGCGCAACATGGTCAAGCGCA | + |
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Preference number: 3 (lower is better) Translates to: AHEIQAPDRRLP*AHANSATWSSA Trigger: TGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR GCA 72 bp | CCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTaGCTTGGGCACATGCAAACAGCGCAACATGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: PQHMKSKPPTDA*LGHMQTAQHGQ Trigger: TTGACCATGTTGCGCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| 3UTR GCA 72 bp | AGGACAGGAAAAATAAGATTCGTACTTCTTGTAAAATaGCCATTTGCTGGGTACTTTCTTTCTCCTTATGTT | + |
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Preference number: 3 (lower is better) Translates to: RTGKIRFVLLVK*PFAGYFLSPYV Trigger: AACATAAGGAGAAAGAAAGTACCCAGCAAATGGGCATTTTACAAGAAGTACGAATCTTATTTTTCCTGTCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| CDS-3UTR GCA 90 bp | TGGGGGCCAGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGCTCCAGGGTAGTTGGTaGTTTCCCGCACGAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: WGPEGTGRSEARGLPAGWLQGSW*FPARGT Trigger: TGTTCCTCGTGCGGGAAAGCACCAACTACCCTGGAG...CCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCTGGCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCACAGGCCTGTCTCTGGTaGGTAAAGAAGCCGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSQACLW*VKKPLG Trigger: GCCGAGCGGCTTCTTTACCCACCAGAGACAGGCCTG...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTCAGGCCTGTCTCTGGTaGGTAAAGAAGCCGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: RRDRQVRGKRPTSRLGLSQACLW*VKKPLG Trigger: GCCGAGCGGCTTCTTTACCCACCAGAGACAGGCCTG...ACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCAGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGCGCTGTCCATTTGACTaGCAGCTTGCCTGTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WGPEGTGRSEARGLPAGWRCPFD*QLACVL Trigger: CAGGACACAGGCAAGCTGCCAGTCAAATGGACAGCG...CCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCTGGCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAAAACGTGGGCCGTGTaGCAGCATCCAGGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSKTWAV*QHPGAS Trigger: GCTGGCACCTGGATGCTGCCACACGGCCCACGTTTT...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCAGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGCACAGGTGCAGCTCATaGGTCTTGATGTGCTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: WGPEGTGRSEARGLPAGWHRCSS*VLMCSS Trigger: GCTCGAGCACATCAAGACCCATGAGCTGCACCTGTG...CCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCTGGCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR TCA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCACATAGTTGGCTGGGATaGTGCCCTCACGGCCCACTT | + |
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Preference number: 4 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSHSWLG*CPHGPL Trigger: AAGTGGGCCGTGAGGGCATCATCCCAGCCAACTATG...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR TCA 90 bp | ACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCTAGGTGGGGTCGGCCTGCTCCCGTGTaGTCTTGCCGTGGAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: TPSPIGGSMREDARPRWGRPAPV*SCRGTR Trigger: CCTGGTTCCACGGCAAGATCACACGGGAGCAGGCCG...ACCCCACCTAGGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR TCA 90 bp | TGGGGGCCAGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGCTCCACCAGCTGCATaGGGTTCTCAAAGTACACCT | + |
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Preference number: 4 (lower is better) Translates to: WGPEGTGRSEARGLPAGWAPPAA*GSQSTP Trigger: AGGTGTACTTTGAGAACCTCATGCAGCTGGTGGAGC...CCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCTGGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR TCA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAACAGGCGCTGTCCATTTaGCTGGCAGCTTGCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: GTGRSEARGLPAGWGSVQQALSI*LAACLC Trigger: ACACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTG...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR GCA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACTCAGTGCCCAGCCACTaGGGTAGAACTCATCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ERPQHMKSKPPTDACLGHSVPSH*GRTHPG Trigger: CCCAGGATGAGTTCTACCGCAGTGGCTGGGCACTGA...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTCTGGACATAGTTGGCTaGGATGATGCCCTCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: RRDRQVRGKRPTSRLGLSLDIVG*DDALTA Trigger: GGCCGTGAGGGCATCATCCCAGCCAACTATGTCCAG...ACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCAGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGCCCTCCATGACCTTTaGTTTGATGAGGCGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: WGPEGTGRSEARGLPAGWALHDL*FDEASA Trigger: TGCACTCGCCTCATCAAACCAAAGGTCATGGAGGGC...CCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCTGGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCAGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGCTTCAGGGGAATTCTTaGGTAAGGCACTCGCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: WGPEGTGRSEARGLPAGWLQGNS*VRHSPE Trigger: TTCGGGCGAGTGCCTTACCCAAGAATTCCCCTGAAG...CCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCTGGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR TCA 90 bp | AGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGCCCAGCAAGCATAGTTGGCTGGGATaGTGCCCTCACGGCCCACTT | + |
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Preference number: 4 (lower is better) Translates to: RQEAYQPAGAQFKFRPSKHSWLG*CPHGPL Trigger: AAGTGGGCCGTGAGGGCATCATCCCAGCCAACTATG...CTTGCTGGGCCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR TCA 90 bp | TTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCGGCCTGCTCCCGTGTaGTCTTGCCGTGGAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGTCKQRNMVKRKHRRPRRPAPV*SCRGTR Trigger: CCTGGTTCCACGGCAAGATCACACGGGAGCAGGCCG...CCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| CDS-3UTR TCA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAATGGCCATGTACTCTGTaGCGATGTAGAGCCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: GTGRSEARGLPAGWGSVQWPCTL*RCRAHP Trigger: AGGGTGGGCTCTACATCGTCACAGAGTACATGGCCA...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR TCA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAAGCTTGCCTGTGTCCTaGGTGCTGGAGGCTTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: GTGRSEARGLPAGWGSVQSLPVS*VLEASL Trigger: TAAGGAAGCCTCCAGCACTCAGGACACAGGCAAGCT...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR GCA 90 bp | TGGGGGCCAGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGTCTTGCTCAGCAGTaGCATGGAAGTTGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WGPEGTGRSEARGLPAGWGLAQQ*HGSCTW Trigger: CCAAGTACAACTTCCATGGCACTGCTGAGCAAGACC...CCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCTGGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCAGAAGCCGCTCGGCCTaGTCCCGTGTGATCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FSGHPKPYRWVHERRCQARSRSA*SRVILP Trigger: CGGCAAGATCACACGGGAGCAGGCCGAGCGGCTTCT...GGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | GCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAAACAGCAGAAGCCGCTCGGCCTaGTCCCGTGTGATCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AHEIQAPDRRLPWAHANSRSRSA*SRVILP Trigger: CGGCAAGATCACACGGGAGCAGGCCGAGCGGCTTCT...GCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAACATTCTGTACCGGATaGCCAGGCGGCCTGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSTFCTG*PGGLYC Trigger: GCAATACAGGCCGCCTGGCCATCCGGTACAGAATGT...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACCGTGTGATCTTGCCGTaGAACCAGGGCATAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERPQHMKSKPPTDACLGHRVILP*NQGIRL Trigger: CAGCCTTATGCCCTGGTTCCACGGCAAGATCACACG...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAACGCTGTCCATTTGACTaGCAGCTTGCCTGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTGRSEARGLPAGWGSVQRCPFD*QLACVL Trigger: CAGGACACAGGCAAGCTGCCAGTCAAATGGACAGCG...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCATGCTCGCATGATACATaGTGCGGTAGTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSCSHDT*CGSAPP Trigger: AGGTGGAGCACTACCGCATCATGTATCATGCGAGCA...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | GCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATTGGCCATGTACTCTGTaGCGATGTAGAGCCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: AATAHEIQAPDRRLPWAHWPCTL*RCRAHP Trigger: AGGGTGGGCTCTACATCGTCACAGAGTACATGGCCA...ATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGAGCTTGCCTGTGTCCTaGGTGCTGGAGGCTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGQRQEAYQPAGAQFKFRSLPVS*VLEASL Trigger: TAAGGAAGCCTCCAGCACTCAGGACACAGGCAAGCT...CCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCACAGAAGGGAAGGTCTTaGTCAGCAGTGCCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSQKGRS*SAVPWK Trigger: CTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTG...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGCCCAGCAAGGCTGAGTTTGGTGCCTaGCTTCACACCCTCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQEAYQPAGAQFKFRPSKAEFGA*LHTLTL Trigger: AAGCGTGAGGGTGTGAAGGCAGGCACCAAACTCAGC...CTTGCTGGGCCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGGGTAGTGCTCCACCTTaGCCTCACAGCTCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: AGQRQEAYQPAGAQFKFRGSAPP*PHSSHT Trigger: TGTGTGTGAGCTGTGAGGGCAAGGTGGAGCACTACC...CCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGGTAGTGCTCCACCTTaGCCTCACAGCTCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: AATAHEIQAPDRRLPWAHGSAPP*PHSSHT Trigger: TGTGTGTGAGCTGTGAGGGCAAGGTGGAGCACTACC...ATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGCCCAGCAAGGAACAGGCCTGTCTCTaGTGGGTAAAGAAGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQEAYQPAGAQFKFRPSKEQACL*WVKKPL Trigger: GAGCGGCTTCTTTACCCACCAGAGACAGGCCTGTTC...CTTGCTGGGCCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | GCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGAGTCTCCAGGGTAGTTaGTGCTTTCCCGCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGQRQEAYQPAGAQFKFRSLQGS*CFPARG Trigger: TCCTCGTGCGGGAAAGCACCAACTACCCTGGAGACT...CCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACGCCCTCCATGACCTTTaGTTTGATGAGGCGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERPQHMKSKPPTDACLGHALHDL*FDEASA Trigger: TGCACTCGCCTCATCAAACCAAAGGTCATGGAGGGC...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | AAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGGATGGGGGACGGGCTCAGCCAGGAAGGCCTaGGCAGTTGCGTCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KHRRPRQHWTWNTGWGTGSARKA*AVASFL Trigger: CAAGAATGACGCAACTGCCCAGGCCTTCCTGGCTGA...GCCCGTCCCCCATCCCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAAAAAACGTGGGCCGTGTaGCAGCATCCAGGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQHMKSKPPTDACLGHMQKTWAV*QHPGAS Trigger: GCTGGCACCTGGATGCTGCCACACGGCCCACGTTTT...TTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAACATAGTTGGCTGGGATaGTGCCCTCACGGCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PQHMKSKPPTDACLGHMQHSWLG*CPHGPL Trigger: AAGTGGGCCGTGAGGGCATCATCCCAGCCAACTATG...TTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | ACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCTAGGTGGGGTTCAGTGCCCAGCCACTaGGGTAGAACTCATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSPIGGSMREDARPRWGSVPSH*GRTHPG Trigger: CCCAGGATGAGTTCTACCGCAGTGGCTGGGCACTGA...ACCCCACCTAGGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACTTCCTTCATGTTCAGTaGCCAGCCACTGCGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERPQHMKSKPPTDACLGHFLHVQ*PATAVE Trigger: TTCTACCGCAGTGGCTGGGCACTGAACATGAAGGAA...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| CDS-3UTR GCA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAATTCCTTCATGTTCAGTaGCCAGCCACTGCGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTGRSEARGLPAGWGSVQFLHVQ*PATAVE Trigger: TTCTACCGCAGTGGCTGGGCACTGAACATGAAGGAA...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | GCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAAACAGCCTGGACATAGTTGGCTaGGATGATGCCCTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHEIQAPDRRLPWAHANSLDIVG*DDALTA Trigger: GGCCGTGAGGGCATCATCCCAGCCAACTATGTCCAG...GCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATCAGGCCTGTCTCTGGTaGGTAAAGAAGCCGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPSVGTPSPIGGSMREDQACLW*VKKPLG Trigger: GCCGAGCGGCTTCTTTACCCACCAGAGACAGGCCTG...ATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | ACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCTAGGTGGGGTATCACACCCAGCAGCTaGACGAGGTTGCTGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TPSPIGGSMREDARPRWGITPSS*TRLLCR Trigger: TCGGCACAGCAACCTCGTCCAGCTGCTGGGTGTGAT...ACCCCACCTAGGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | GCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGCTTCAGGGGAATTCTTaGGTAAGGCACTCGCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGQRQEAYQPAGAQFKFRLQGNS*VRHSPE Trigger: TTCGGGCGAGTGCCTTACCCAAGAATTCCCCTGAAG...CCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | TTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGAAAACGTGGGCCGTGTaGCAGCATCCAGGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGTCKQRNMVKRKHRRPRKTWAV*QHPGAS Trigger: GCTGGCACCTGGATGCTGCCACACGGCCCACGTTTT...CCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGTGGCCATGTACTCTGTaGCGATGTAGAGCCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFSGHPKPYRWVHERRCQWPCTL*RCRAHP Trigger: AGGGTGGGCTCTACATCGTCACAGAGTACATGGCCA...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR TCA 90 bp | TCAGCCCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATCAGGCGCTGTCCATTTaGCTGGCAGCTTGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAPSVGTPSPIGGSMREDQALSI*LAACLC Trigger: ACACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTG...ATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTCATGGAGTGGTTTATTGATTCCATCTCACAAGGCGGTGTGGGTGAGCGGAGAAGCCGCTCGGCCTaGTCCCGTGTGATCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLMEWFIDSISQGGVGERRSRSA*SRVILP Trigger: CGGCAAGATCACACGGGAGCAGGCCGAGCGGCTTCT...CCGCTCACCCACACCGCCTTGTGAGATGGAATCAATAAACCACTCCATGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | ACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCTAGGTGGGGTCTCCAGGGTAGTTGGTaGTTTCCCGCACGAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TPSPIGGSMREDARPRWGLQGSW*FPARGT Trigger: TGTTCCTCGTGCGGGAAAGCACCAACTACCCTGGAG...ACCCCACCTAGGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGTCAGTGCCCAGCCACTaGGGTAGAACTCATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTCKQRNMVKRKHRRPRSVPSH*GRTHPG Trigger: CCCAGGATGAGTTCTACCGCAGTGGCTGGGCACTGA...CCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | GCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATTTCCTTCATGTTCAGTaGCCAGCCACTGCGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AATAHEIQAPDRRLPWAHFLHVQ*PATAVE Trigger: TTCTACCGCAGTGGCTGGGCACTGAACATGAAGGAA...ATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCTAGGTGGGGTACATTCTGTACCGGATaGCCAGGCGGCCTGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSPIGGSMREDARPRWGTFCTG*PGGLYC Trigger: GCAATACAGGCCGCCTGGCCATCCGGTACAGAATGT...ACCCCACCTAGGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCGAACAGGCCTGTCTCTaGTGGGTAAAGAAGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSGHPKPYRWVHERRCQAEQACL*WVKKPL Trigger: GAGCGGCTTCTTTACCCACCAGAGACAGGCCTGTTC...GGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGAGTCTCCAGGGTAGTTaGTGCTTTCCCGCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFSGHPKPYRWVHERRCQSLQGS*CFPARG Trigger: TCCTCGTGCGGGAAAGCACCAACTACCCTGGAGACT...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCTCAGCCAGGAAGGCCTaGGCAGTTGCGTCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSGHPKPYRWVHERRCQASARKA*AVASFL Trigger: CAAGAATGACGCAACTGCCCAGGCCTTCCTGGCTGA...GGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAATCAGCCAGGAAGGCCTaGGCAGTTGCGTCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PQHMKSKPPTDACLGHMQSARKA*AVASFL Trigger: CAAGAATGACGCAACTGCCCAGGCCTTCCTGGCTGA...TTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGATCACACCCAGCAGCTaGACGAGGTTGCTGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TWSSANTGDRGNTGHGTRITPSS*TRLLCR Trigger: TCGGCACAGCAACCTCGTCCAGCTGCTGGGTGTGAT...CCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGATCACACCCAGCAGCTaGACGAGGTTGCTGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTCKQRNMVKRKHRRPRITPSS*TRLLCR Trigger: TCGGCACAGCAACCTCGTCCAGCTGCTGGGTGTGAT...CCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | GCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATCCTCCAGGTACTCCATaGCTTCACAGACGTCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: AATAHEIQAPDRRLPWAHPPGTP*LHRRLM Trigger: CATTAGACGTCTGTGAAGCCATGGAGTACCTGGAGG...ATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGGATGGGCGCTGTCCATTTGACTaGCAGCTTGCCTGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSANTGDRGNTGHGTRDGRCPFD*QLACVL Trigger: CAGGACACAGGCAAGCTGCCAGTCAAATGGACAGCG...CCCATCCCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | GCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCACTTCAGGGGAATTCTTaGGTAAGGCACTCGCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATAHEIQAPDRRLPWAHALQGNS*VRHSPE Trigger: TTCGGGCGAGTGCCTTACCCAAGAATTCCCCTGAAG...TGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCCACAGGTGCAGCTCATaGGTCTTGATGTGCTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSGHPKPYRWVHERRCQAHRCSS*VLMCSS Trigger: GCTCGAGCACATCAAGACCCATGAGCTGCACCTGTG...GGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAATGCTCGCATGATACATaGTGCGGTAGTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PQHMKSKPPTDACLGHMQCSHDT*CGSAPP Trigger: AGGTGGAGCACTACCGCATCATGTATCATGCGAGCA...TTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCGCTCCACCAGCTGCATaGGGTTCTCAAAGTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: FSGHPKPYRWVHERRCQAAPPAA*GSQSTP Trigger: AGGTGTACTTTGAGAACCTCATGCAGCTGGTGGAGC...GGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | AGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAAGCTTGCCTGTGTCCTaGGTGCTGGAGGCTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SATWSSANTGDRGNTGHGSLPVS*VLEASL Trigger: TAAGGAAGCCTCCAGCACTCAGGACACAGGCAAGCT...TCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | GCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAGGTCTTGCTCAGCAGTaGCATGGAAGTTGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATAHEIQAPDRRLPWAHAGLAQQ*HGSCTW Trigger: CCAAGTACAACTTCCATGGCACTGCTGAGCAAGACC...TGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | GCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGAGCTGAGTTTGGTGCCTaGCTTCACACCCTCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ANSATWSSANTGDRGNTGAEFGA*LHTLTL Trigger: AAGCGTGAGGGTGTGAAGGCAGGCACCAAACTCAGC...TCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGGCTGAGTTTGGTGCCTaGCTTCACACCCTCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TWSSANTGDRGNTGHGTRAEFGA*LHTLTL Trigger: AAGCGTGAGGGTGTGAAGGCAGGCACCAAACTCAGC...CCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGCTCCAGGGTAGTTGGTaGTTTCCCGCACGAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TWSSANTGDRGNTGHGTRLQGSW*FPARGT Trigger: TGTTCCTCGTGCGGGAAAGCACCAACTACCCTGGAG...CCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGGTAGTGCTCCACCTTaGCCTCACAGCTCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: SAPSVGTPSPIGGSMREDGSAPP*PHSSHT Trigger: TGTGTGTGAGCTGTGAGGGCAAGGTGGAGCACTACC...ATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | ACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGACATTCTGTACCGGATaGCCAGGCGGCCTGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TWSSANTGDRGNTGHGTRTFCTG*PGGLYC Trigger: GCAATACAGGCCGCCTGGCCATCCGGTACAGAATGT...CCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | AGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGACGTGTGATCTTGCCGTaGAACCAGGGCATAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SATWSSANTGDRGNTGHGRVILP*NQGIRL Trigger: CAGCCTTATGCCCTGGTTCCACGGCAAGATCACACG...TCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCCCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATCGTGTGATCTTGCCGTaGAACCAGGGCATAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAPSVGTPSPIGGSMREDRVILP*NQGIRL Trigger: CAGCCTTATGCCCTGGTTCCACGGCAAGATCACACG...ATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGAGTCTCCAGGGTAGTTaGTGCTTTCCCGCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTCKQRNMVKRKHRRPRSLQGS*CFPARG Trigger: TCCTCGTGCGGGAAAGCACCAACTACCCTGGAGACT...CCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAAGGTCTTGCTCAGCAGTaGCATGGAAGTTGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQHMKSKPPTDACLGHMQGLAQQ*HGSCTW Trigger: CCAAGTACAACTTCCATGGCACTGCTGAGCAAGACC...TTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | AGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGACAGAAGGGAAGGTCTTaGTCAGCAGTGCCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SATWSSANTGDRGNTGHGQKGRS*SAVPWK Trigger: CTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTG...TCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGAAGGCCTGGGCAGTTaGGTCATTCTTGATGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PFSGHPKPYRWVHERRCQEGLGS*VILDAL Trigger: AAGTGCATCAAGAATGACGCAACTGCCCAGGCCTTC...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | GTCCTCATGGAGTGGTTTATTGATTCCATCTCACAAGGCGGTGTGGGTGAGCGGCTGGACATAGTTGGCTaGGATGATGCCCTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLMEWFIDSISQGGVGERLDIVG*DDALTA Trigger: GGCCGTGAGGGCATCATCCCAGCCAACTATGTCCAG...CCGCTCACCCACACCGCCTTGTGAGATGGAATCAATAAACCACTCCATGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGGATGGGCCTCCAGGTACTCCATaGCTTCACAGACGTCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SSANTGDRGNTGHGTRDGPPGTP*LHRRLM Trigger: CATTAGACGTCTGTGAAGCCATGGAGTACCTGGAGG...CCCATCCCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGCCTCCAGGTACTCCATaGCTTCACAGACGTCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: PFSGHPKPYRWVHERRCQPPGTP*LHRRLM Trigger: CATTAGACGTCTGTGAAGCCATGGAGTACCTGGAGG...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | AAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACAGCTCCACCAGCTGCATaGGGTTCTCAAAGTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: KQRNMVKRKHRRPRQHWTAPPAA*GSQSTP Trigger: AGGTGTACTTTGAGAACCTCATGCAGCTGGTGGAGC...TGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCCCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGAAGGCCTGGGCAGTTaGGTCATTCTTGATGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SAPSVGTPSPIGGSMREDEGLGS*VILDAL Trigger: AAGTGCATCAAGAATGACGCAACTGCCCAGGCCTTC...ATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR GCA 90 bp | TTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGGAAGGCCTGGGCAGTTaGGTCATTCTTGATGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTCKQRNMVKRKHRRPREGLGS*VILDAL Trigger: AAGTGCATCAAGAATGACGCAACTGCCCAGGCCTTC...CCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | AAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACAGCCCTCCATGACCTTTaGTTTGATGAGGCGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQRNMVKRKHRRPRQHWTALHDL*FDEASA Trigger: TGCACTCGCCTCATCAAACCAAAGGTCATGGAGGGC...TGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAATCCACACATCAGACTTaGTGGAAAATTTCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGRSEARGLPAGWGSVQSTHQT*WKISSL Trigger: GAGAGAAGAAATTTTCCACCAAGTCTGATGTGTGGA...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | GTCCTCATGGAGTGGTTTATTGATTCCATCTCACAAGGCGGTGTGGGTGAGCGGCACAGGTGCAGCTCATaGGTCTTGATGTGCTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLMEWFIDSISQGGVGERHRCSS*VLMCSS Trigger: GCTCGAGCACATCAAGACCCATGAGCTGCACCTGTG...CCGCTCACCCACACCGCCTTGTGAGATGGAATCAATAAACCACTCCATGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTACACATCAGACTTGGTaGAAAATTTCTTCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRDRQVRGKRPTSRLGLSTHQTW*KISSLS Trigger: TGAGAGAGAAGAAATTTTCCACCAAGTCTGATGTGT...ACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAACACATCAGACTTGGTaGAAAATTTCTTCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGRSEARGLPAGWGSVQTHQTW*KISSLS Trigger: TGAGAGAGAAGAAATTTTCCACCAAGTCTGATGTGT...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CCA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGCATGGAAGTTGTACTTaGCAATACATTCTGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PFSGHPKPYRWVHERRCQHGSCT*QYILYR Trigger: CCGGTACAGAATGTATTGCCAAGTACAACTTCCATG...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAATCCACACATCAGACTTaGTGGAAAATTTCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQHMKSKPPTDACLGHMQSTHQT*WKISSL Trigger: GAGAGAAGAAATTTTCCACCAAGTCTGATGTGTGGA...TTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGTCCACACATCAGACTTaGTGGAAAATTTCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFSGHPKPYRWVHERRCQSTHQT*WKISSL Trigger: GAGAGAAGAAATTTTCCACCAAGTCTGATGTGTGGA...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTCATGGAGTGGTTTATTGATTCCATCTCACAAGGCGGTGTGGGTGAGCGGCATGGAAGTTGTACTTaGCAATACATTCTGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLMEWFIDSISQGGVGERHGSCT*QYILYR Trigger: CCGGTACAGAATGTATTGCCAAGTACAACTTCCATG...CCGCTCACCCACACCGCCTTGTGAGATGGAATCAATAAACCACTCCATGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR TCA 90 bp | AGGACAGGAAAAATAAGATTCGTACTTCTTGTAAAATGCCCATTTGCTGGGTACCAGGCGCTGTCCATTTaGCTGGCAGCTTGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTGKIRFVLLVKCPFAGYQALSI*LAACLC Trigger: ACACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTG...GTACCCAGCAAATGGGCATTTTACAAGAAGTACGAATCTTATTTTTCCTGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTCATGGAGTGGTTTATTGATTCCATCTCACAAGGCGGTGTGGGTGAGCGGACACATCAGACTTGGTaGAAAATTTCTTCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLMEWFIDSISQGGVGERTHQTW*KISSLS Trigger: TGAGAGAGAAGAAATTTTCCACCAAGTCTGATGTGT...CCGCTCACCCACACCGCCTTGTGAGATGGAATCAATAAACCACTCCATGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCCAGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGTTGGCTTTGTACCAGTaGGGGTCCTTGGTGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WGPEGTGRSEARGLPAGWLALYQ*GSLVTA Trigger: GGCTGTCACCAAGGACCCCAACTGGTACAAAGCCAA...CCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCTGGCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCCAGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGCCCTCACGGCCCACTTaGTTTTTGGCTTTGTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: WGPEGTGRSEARGLPAGWPSRPT*FLALYQ Trigger: CTGGTACAAAGCCAAAAACAAAGTGGGCCGTGAGGG...CCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCTGGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACTCAGGCGCTGTCCATTaGACTGGCAGCTTGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERPQHMKSKPPTDACLGHSGAVH*TGSLPV Trigger: CACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTGA...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCACCTTCAGGGGAATTCTaGGGTAAGGCACTCGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSPSGEF*GKALAR Trigger: TCGGGCGAGTGCCTTACCCAAGAATTCCCCTGAAGG...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CCA 90 bp | AGGGTAGTTGGTGCTTTCCCGCACGAGGAACAGGCCTGTCTCTGGTaGGTAAAGAAGCCGCTCGGCCTGCTCCCGTGTGATCTTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVVGAFPHEEQACLW*VKKPLGLLPCDLAV Trigger: CACGGCAAGATCACACGGGAGCAGGCCGAGCGGCTTCTTTACCCACCAGAGACAGGCCTGTTCCTCGTGCGGGAAAGCACCAACTACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CCA 90 bp | TCCAGGGTAGTTGGTGCTTTCCCGCACGAGGAACAGGCCTGTCTCTaGTGGGTAAAGAAGCCGCTCGGCCTGCTCCCGTGTGATCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRVVGAFPHEEQACL*WVKKPLGLLPCDLA Trigger: GGCAAGATCACACGGGAGCAGGCCGAGCGGCTTCTTTACCCACCAGAGACAGGCCTGTTCCTCGTGCGGGAAAGCACCAACTACCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGGGCATAAGGCTGAGTTaGGTGCCTGCCTTCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: AGQRQEAYQPAGAQFKFRGIRLS*VPAFTP Trigger: GGGTGTGAAGGCAGGCACCAAACTCAGCCTTATGCC...CCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGCCCAGCAAGTCAGGCGCTGTCCATTaGACTGGCAGCTTGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQEAYQPAGAQFKFRPSKSGAVH*TGSLPV Trigger: CACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTGA...CTTGCTGGGCCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTGTGAGCACATCTCCTTaGCAGAAGGGAAGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRDRQVRGKRPTSRLGLSVSTSP*QKGRSC Trigger: GCAAGACCTTCCCTTCTGCAAAGGAGATGTGCTCAC...ACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACCCCTCACGGCCCACTTaGTTTTTGGCTTTGTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ERPQHMKSKPPTDACLGHPSRPT*FLALYQ Trigger: CTGGTACAAAGCCAAAAACAAAGTGGGCCGTGAGGG...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS GCA 90 bp | TGTGGCAGCATCCAGGTGCCAGCAGTTCTTCATCACCTCGTAGACTaGGGGCGGGCAGCCATCCGGAGCGTCCATCTTATAGCCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGSIQVPAVLHHLVD*GRAAIRSVHLIALF Trigger: GAAAAGGGCTATAAGATGGACGCTCCGGATGGCTGCCCGCCCGCAGTCTACGAGGTGATGAAGAACTGCTGGCACCTGGATGCTGCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS GCA 90 bp | AGGTGCAGCTCATGGGTCTTGATGTGCTCGAGCTGTTCCCGAAGCTaGAAAAACGTGGGCCGTGTGGCAGCATCCAGGTGCCAGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCSSWVLMCSSCSRS*KNVGRVAASRCQQF Trigger: GAACTGCTGGCACCTGGATGCTGCCACACGGCCCACGTTTTTGCAGCTTCGGGAACAGCTCGAGCACATCAAGACCCATGAGCTGCACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CCA 90 bp | GCGGTAGAACTCATCCTGGGCCGCCACGGTGCCCTCCATGACCTTTaGTTTGATGAGGCGAGTGCAGAGTCCATCGGCATCTGTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AVELILGRHGALHDL*FDEASAESIGICGV Trigger: TACACCACAGATGCCGATGGACTCTGCACTCGCCTCATCAAACCAAAGGTCATGGAGGGCACCGTGGCGGCCCAGGATGAGTTCTACCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGGATGGGGTTGGCTTTGTACCAGTaGGGGTCCTTGGTGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QAQTQATEATLDMEHGMGLALYQ*GSLVTA Trigger: GGCTGTCACCAAGGACCCCAACTGGTACAAAGCCAA...CCCCATCCCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCTAGGTGGGGTGGCATAAGGCTGAGTTaGGTGCCTGCCTTCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: TPSPIGGSMREDARPRWGGIRLS*VPAFTP Trigger: GGGTGTGAAGGCAGGCACCAAACTCAGCCTTATGCC...ACCCCACCTAGGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAAACAGCTGCTCCCGTGTGATCTaGCCGTGGAACCAGGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: AHEIQAPDRRLPWAHANSCSRVI*PWNQGI Trigger: TATGCCCTGGTTCCACGGCAAGATCACACGGGAGCA...GCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGTGCTCCCGTGTGATCTaGCCGTGGAACCAGGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: PFSGHPKPYRWVHERRCQCSRVI*PWNQGI Trigger: TATGCCCTGGTTCCACGGCAAGATCACACGGGAGCA...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCATCCATGACCTTTGGTTaGATGAGGCGAGTGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSSMTFG*MRRVQS Trigger: ACTCTGCACTCGCCTCATCAAACCAAAGGTCATGGA...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAATCCATGACCTTTGGTTaGATGAGGCGAGTGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GTGRSEARGLPAGWGSVQSMTFG*MRRVQS Trigger: ACTCTGCACTCGCCTCATCAAACCAAAGGTCATGGA...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAACTCCCCCTTCCCTATaGTCTGTAGCAGCTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSTPPSL*SVAASV Trigger: AACTGAAGCTGCTACAGACAATAGGGAAGGGGGAGT...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAAGTTCAGGCTGACTTTGGCCACGTaGTCTTCAGACACCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AGQRQEAYQPAGAQFKFRLTLAT*SSDTST Trigger: TGTGCTGGTGTCTGAAGACAACGTGGCCAAAGTCAG...CCTGAACTTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGTCAGGCGCTGTCCATTaGACTGGCAGCTTGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PFSGHPKPYRWVHERRCQSGAVH*TGSLPV Trigger: CACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTGA...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGGATGGGCCTTCAGGGGAATTCTaGGGTAAGGCACTCGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSANTGDRGNTGHGTRDGPSGEF*GKALAR Trigger: TCGGGCGAGTGCCTTACCCAAGAATTCCCCTGAAGG...CCCATCCCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCCCTTCAGGGGAATTCTaGGGTAAGGCACTCGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FSGHPKPYRWVHERRCQAPSGEF*GKALAR Trigger: TCGGGCGAGTGCCTTACCCAAGAATTCCCCTGAAGG...GGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAAACAGCTTGGCTTTGTACCAGTaGGGGTCCTTGGTGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHEIQAPDRRLPWAHANSLALYQ*GSLVTA Trigger: GGCTGTCACCAAGGACCCCAACTGGTACAAAGCCAA...GCTGTTTGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCACGGCCCACTTTGTTTTaGGCTTTGTACCAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATAHEIQAPDRRLPWAHARPTLF*ALYQLG Trigger: CCCCAACTGGTACAAAGCCAAAAACAAAGTGGGCCG...TGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGATGCTCCCGTGTGATCTaGCCGTGGAACCAGGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SATWSSANTGDRGNTGHGCSRVI*PWNQGI Trigger: TATGCCCTGGTTCCACGGCAAGATCACACGGGAGCA...TCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GAGCGGCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACCCATGGAAGTTGTACTaGGCAATACATTCTGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: ERPQHMKSKPPTDACLGHPWKLY*AIHSVP Trigger: CGGTACAGAATGTATTGCCAAGTACAACTTCCATGG...GTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGCCGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAACCATGGAAGTTGTACTaGGCAATACATTCTGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: GTGRSEARGLPAGWGSVQPWKLY*AIHSVP Trigger: CGGTACAGAATGTATTGCCAAGTACAACTTCCATGG...TTGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS-3UTR CAA 90 bp | TTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCGTGAGCACATCTCCTTaGCAGAAGGGAAGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSGHPKPYRWVHERRCQAVSTSP*QKGRSC Trigger: GCAAGACCTTCCCTTCTGCAAAGGAGATGTGCTCAC...GGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGTGAGCACATCTCCTTaGCAGAAGGGAAGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PFSGHPKPYRWVHERRCQVSTSP*QKGRSC Trigger: GCAAGACCTTCCCTTCTGCAAAGGAGATGTGCTCAC...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTTCAACGTCTAATGAGAATTaGAGGAGACAGTCTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: RDRQVRGKRPTSRLGLSSTSNEN*RRQSPP Trigger: AGGTGGAGACTGTCTCCTCAAATTCTCATTAGACGT...TGAACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
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| CDS GCA 90 bp | TGCCCTCACAGCTCACACACAGTGTGTAGTCTCCAGGGTAGTTGGTaGTTTCCCGCACGAGGAACAGGCCTGTCTCTGGTGGGTAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CPHSSHTVCSLQGSW*FPARGTGLSLVGKE Trigger: TTCTTTACCCACCAGAGACAGGCCTGTTCCTCGTGCGGGAAAGCACCAACTACCCTGGAGACTACACACTGTGTGTGAGCTGTGAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGGATGGGGGACGGGCCCATGGAAGTTGTACTaGGCAATACATTCTGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: KHRRPRQHWTWNTGWGTGPWKLY*AIHSVP Trigger: CGGTACAGAATGTATTGCCAAGTACAACTTCCATGG...GCCCGTCCCCCATCCCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCCCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATCGGCCCACTTTGTTTTaGGCTTTGTACCAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAPSVGTPSPIGGSMREDRPTLF*ALYQLG Trigger: CCCCAACTGGTACAAAGCCAAAAACAAAGTGGGCCG...ATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCGGCCCACTTTGTTTTaGGCTTTGTACCAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGTCKQRNMVKRKHRRPRRPTLF*ALYQLG Trigger: CCCCAACTGGTACAAAGCCAAAAACAAAGTGGGCCG...CCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGCCCTCACGGCCCACTTaGTTTTTGGCTTTGTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TWSSANTGDRGNTGHGTRPSRPT*FLALYQ Trigger: CTGGTACAAAGCCAAAAACAAAGTGGGCCGTGAGGG...CCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGACTGACTTTGGCCACGTaGTCTTCAGACACCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SATWSSANTGDRGNTGHGLTLAT*SSDTST Trigger: TGTGCTGGTGTCTGAAGACAACGTGGCCAAAGTCAG...TCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | ACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGCTGACTTTGGCCACGTaGTCTTCAGACACCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TWSSANTGDRGNTGHGTRLTLAT*SSDTST Trigger: TGTGCTGGTGTCTGAAGACAACGTGGCCAAAGTCAG...CCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCTAGGTGGGGTCCAAAGTCACTGACTTaGGCCACGTTGTCTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TPSPIGGSMREDARPRWGPKSLT*ATLSSD Trigger: GTCTGAAGACAACGTGGCCAAAGTCAGTGACTTTGG...ACCCCACCTAGGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGACAGGCAGGTCAGAGGCAAGAGGCCTACCAGCCGGCTGGGGCTCAGTCTCCACACATCAGACTaGGTGGAAAATTTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRDRQVRGKRPTSRLGLSLHTSD*VENFFS Trigger: AGAGAAGAAATTTTCCACCAAGTCTGATGTGTGGAG...ACTGAGCCCCAGCCGGCTGGTAGGCCTCTTGCCTCTGACCTGCCTGTCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS TCA 90 bp | TGCCTGCCTTCACACCCTCACGCTTCTGGACATAGTTGGCTGGGATaGTGCCCTCACGGCCCACTTTGTTTTTGGCTTTGTACCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLPSHPHASGHSWLG*CPHGPLCFWLCTSW Trigger: CCAACTGGTACAAAGCCAAAAACAAAGTGGGCCGTGAGGGCATCATCCCAGCCAACTATGTCCAGAAGCGTGAGGGTGTGAAGGCAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS TCA 90 bp | AAGGCTTCAGGCGCTGTCCATTTGACTGGCAGCTTGCCTGTGTCCTaGGTGCTGGAGGCTTCCTTAGTGAGGCCAAAGTCACTGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KASGAVHLTGSLPVS*VLEASLVRPKSLTL Trigger: CAAAGTCAGTGACTTTGGCCTCACTAAGGAAGCCTCCAGCACTCAGGACACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTGAAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS GCA 90 bp | TGTGATCTTGCCGTGGAACCAGGGCATAAGGCTGAGTTTGGTGCCTaGCTTCACACCCTCACGCTTCTGGACATAGTTGGCTGGGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: CDLAVEPGHKAEFGA*LHTLTLLDIVGWDD Trigger: ATCATCCCAGCCAACTATGTCCAGAAGCGTGAGGGTGTGAAGGCAGGCACCAAACTCAGCCTTATGCCCTGGTTCCACGGCAAGATCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CCA 90 bp | TGCAGAAGGGAAGGTCTTGCTCAGCAGTGCCATGGAAGTTGTACTTaGCAATACATTCTGTACCGGATGGCCAGGCGGCCTGTATTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CRREGLAQQCHGSCT*QYILYRMARRPVLP Trigger: CGGCAATACAGGCCGCCTGGCCATCCGGTACAGAATGTATTGCCAAGTACAACTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCCCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATACTCCCCCTTCCCTATaGTCTGTAGCAGCTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SAPSVGTPSPIGGSMREDTPPSL*SVAASV Trigger: AACTGAAGCTGCTACAGACAATAGGGAAGGGGGAGT...ATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | GCCACAGCACATGAAATCCAAGCCCCCGACAGACGCCTGCCTTGGGCACATGCAACGTCTAATGAGAATTaGAGGAGACAGTCTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ATAHEIQAPDRRLPWAHATSNEN*RRQSPP Trigger: AGGTGGAGACTGTCTCCTCAAATTCTCATTAGACGT...TGCATGTGCCCAAGGCAGGCGTCTGTCGGGGGCTTGGATTTCATGTGCTGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCCAAAGTCACTGACTTaGGCCACGTTGTCTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGTCKQRNMVKRKHRRPRPKSLT*ATLSSD Trigger: GTCTGAAGACAACGTGGCCAAAGTCAGTGACTTTGG...CCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS TCA 90 bp | GTGATCGAAGATAGTCCACCAAACTCCCCTTGGCCATGTACTCTGTaGCGATGTAGAGCCCACCCTTCTCCTCCACAATCACACCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VIEDSPPNSPWPCTL*RCRAHPSPPQSHPA Trigger: TGCTGGGTGTGATTGTGGAGGAGAAGGGTGGGCTCTACATCGTCACAGAGTACATGGCCAAGGGGAGTTTGGTGGACTATCTTCGATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CCA 90 bp | TTTGGTGCCTGCCTTCACACCCTCACGCTTCTGGACATAGTTGGCTaGGATGATGCCCTCACGGCCCACTTTGTTTTTGGCTTTGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: FGACLHTLTLLDIVG*DDALTAHFVFGFVP Trigger: TGGTACAAAGCCAAAAACAAAGTGGGCCGTGAGGGCATCATCCCAGCCAACTATGTCCAGAAGCGTGAGGGTGTGAAGGCAGGCACCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACAACTCCCCCTTCCCTATaGTCTGTAGCAGCTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KQRNMVKRKHRRPRQHWTTPPSL*SVAASV Trigger: AACTGAAGCTGCTACAGACAATAGGGAAGGGGGAGT...TGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACATGGAACACGGGATGGGACGTCTAATGAGAATTaGAGGAGACAGTCTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SSANTGDRGNTGHGTRDGTSNEN*RRQSPP Trigger: AGGTGGAGACTGTCTCCTCAAATTCTCATTAGACGT...CCCATCCCGTGTTCCATGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGCAACACTGGACACCAAAGTCACTGACTTaGGCCACGTTGTCTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KQRNMVKRKHRRPRQHWTPKSLT*ATLSSD Trigger: GTCTGAAGACAACGTGGCCAAAGTCAGTGACTTTGG...TGTCCAGTGTTGCCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS TCA 90 bp | CAAAGTACACCTCCTCATCAATGCTCAGCTTGCTCGCATGATACATaGTGCGGTAGTGCTCCACCTTGCCCTCACAGCTCACACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QSTPPHQCSACSHDT*CGSAPPCPHSSHTV Trigger: CACTGTGTGTGAGCTGTGAGGGCAAGGTGGAGCACTACCGCATCATGTATCATGCGAGCAAGCTGAGCATTGATGAGGAGGTGTACTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CCA 90 bp | AGCACATCTCCTTTGCAGAAGGGAAGGTCTTGCTCAGCAGTGCCATaGAAGTTGTACTTGGCAATACATTCTGTACCGGATGGCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: STSPLQKGRSCSAVP*KLYLAIHSVPDGQA Trigger: CGCCTGGCCATCCGGTACAGAATGTATTGCCAAGTACAACTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTGCAAAGGAGATGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CCA 90 bp | GGAAAATTTCTTCTCTCTCAAGGCTTCAGGCGCTGTCCATTTGACTaGCAGCTTGCCTGTGTCCTGAGTGCTGGAGGCTTCCTTAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GKFLLSQGFRRCPFD*QLACVLSAGGFLSE Trigger: CTCACTAAGGAAGCCTCCAGCACTCAGGACACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTGAAGCCTTGAGAGAGAAGAAATTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGCACATGCAAACAGCGCAACATGGTCAAGCGCAAACACAGGCGACCGAGGGCAGTGCCATGGAAGTaGTACTTGGCAATACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGTCKQRNMVKRKHRRPRAVPWK*YLAIHS Trigger: AGAATGTATTGCCAAGTACAACTTCCATGGCACTGC...CCTCGGTCGCCTGTGTTTGCGCTTGACCATGTTGCGCTGTTTGCATGTGCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCCCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCAGTGCCATGGAAGTaGTACTTGGCAATACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAPSVGTPSPIGGSMREDAVPWK*YLAIHS Trigger: AGAATGTATTGCCAAGTACAACTTCCATGGCACTGC...ATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTCAGTGGGCACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGCTCCACACATCAGACTaGGTGGAAAATTTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFSGHPKPYRWVHERRCQLHTSD*VENFFS Trigger: AGAGAAGAAATTTTCCACCAAGTCTGATGTGTGGAG...CTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGTGCCCACTGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAGCCCTATAGGTGGGTCCATGAGAGAAGATGCCAGGCCTAGGTGGGGTCTCCACACATCAGACTaGGTGGAAAATTTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TPSPIGGSMREDARPRWGLHTSD*VENFFS Trigger: AGAGAAGAAATTTTCCACCAAGTCTGATGTGTGGAG...ACCCCACCTAGGCCTGGCATCTTCTCTCATGGACCCACCTATAGGGCTTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS-3UTR CAA 90 bp | AGGACAGGAAAAATAAGATTCGTACTTCTTGTAAAATGCCCATTTGCTGGGTACTCCATGACCTTTGGTTaGATGAGGCGAGTGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RTGKIRFVLLVKCPFAGYSMTFG*MRRVQS Trigger: ACTCTGCACTCGCCTCATCAAACCAAAGGTCATGGA...GTACCCAGCAAATGGGCATTTTACAAGAAGTACGAATCTTATTTTTCCTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034863.8 ENSMUST00000217314.2 |
||
| CDS GCA 72 bp | ACACCCAGCAGCTGGACGAGGTTGCTGTGCCGAAGTTaGGTCATGACGGAGGCTTCAGCCAGGAAGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TPSSWTRLLCRS*VMTEASARKAW Trigger: CCAGGCCTTCCTGGCTGAAGCCTCCGTCATGACGCAACTTCGGCACAGCAACCTCGTCCAGCTGCTGGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CCA 72 bp | GTTGGTGCTTTCCCGCACGAGGAACAGGCCTGTCTCTaGTGGGTAAAGAAGCCGCTCGGCCTGCTCCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: VGAFPHEEQACL*WVKKPLGLLPC Trigger: ACACGGGAGCAGGCCGAGCGGCTTCTTTACCCACCAGAGACAGGCCTGTTCCTCGTGCGGGAAAGCACCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CCA 72 bp | CTCATCCTGGGCCGCCACGGTGCCCTCCATGACCTTTaGTTTGATGAGGCGAGTGCAGAGTCCATCGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LILGRHGALHDL*FDEASAESIGI Trigger: GATGCCGATGGACTCTGCACTCGCCTCATCAAACCAAAGGTCATGGAGGGCACCGTGGCGGCCCAGGATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CAA 72 bp | TCCTGGGCCGCCACGGTGCCCTCCATGACCTTTGGTTaGATGAGGCGAGTGCAGAGTCCATCGGCATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SWAATVPSMTFG*MRRVQSPSASV Trigger: CACAGATGCCGATGGACTCTGCACTCGCCTCATCAAACCAAAGGTCATGGAGGGCACCGTGGCGGCCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS GCA 72 bp | TCCACAATCACACCCAGCAGCTGGACGAGGTTGCTGTaGCGAAGTTGCGTCATGACGGAGGCTTCAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STITPSSWTRLL*RSCVMTEASAR Trigger: CCTGGCTGAAGCCTCCGTCATGACGCAACTTCGGCACAGCAACCTCGTCCAGCTGCTGGGTGTGATTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS GCA 72 bp | GCCGTGGAACCAGGGCATAAGGCTGAGTTTGGTGCCTaGCTTCACACCCTCACGCTTCTGGACATAGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AVEPGHKAEFGA*LHTLTLLDIVG Trigger: GCCAACTATGTCCAGAAGCGTGAGGGTGTGAAGGCAGGCACCAAACTCAGCCTTATGCCCTGGTTCCACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS GCA 72 bp | ATCCAGGTGCCAGCAGTTCTTCATCACCTCGTAGACTaGGGGCGGGCAGCCATCCGGAGCGTCCATCTTATA | + |
|
Preference number: 6 (lower is better) Translates to: IQVPAVLHHLVD*GRAAIRSVHLI Trigger: TATAAGATGGACGCTCCGGATGGCTGCCCGCCCGCAGTCTACGAGGTGATGAAGAACTGCTGGCACCTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS GCA 72 bp | TCATGGGTCTTGATGTGCTCGAGCTGTTCCCGAAGCTaGAAAAACGTGGGCCGTGTGGCAGCATCCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SWVLMCSSCSRS*KNVGRVAASRC Trigger: GCACCTGGATGCTGCCACACGGCCCACGTTTTTGCAGCTTCGGGAACAGCTCGAGCACATCAAGACCCATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CCA 72 bp | CGAGCTGTTCCCGAAGCTGCAAAAACGTGGGCCGTGTaGCAGCATCCAGGTGCCAGCAGTTCTTCATCACCT | + |
|
Preference number: 6 (lower is better) Translates to: RAVPEAAKTWAV*QHPGASSSSSP Trigger: AGGTGATGAAGAACTGCTGGCACCTGGATGCTGCCACACGGCCCACGTTTTTGCAGCTTCGGGAACAGCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS TCA 72 bp | GGCGCTGTCCATTTGACTGGCAGCTTGCCTGTGTCCTaGGTGCTGGAGGCTTCCTTAGTGAGGCCAAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GAVHLTGSLPVS*VLEASLVRPKS Trigger: TGACTTTGGCCTCACTAAGGAAGCCTCCAGCACTCAGGACACAGGCAAGCTGCCAGTCAAATGGACAGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS GCA 72 bp | AGCTCACACACAGTGTGTAGTCTCCAGGGTAGTTGGTaGTTTCCCGCACGAGGAACAGGCCTGTCTCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSHTVCSLQGSW*FPARGTGLSLV Trigger: CACCAGAGACAGGCCTGTTCCTCGTGCGGGAAAGCACCAACTACCCTGGAGACTACACACTGTGTGTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CCA 72 bp | CACAGCTCACACACAGTGTGTAGTCTCCAGGGTAGTTaGTGCTTTCCCGCACGAGGAACAGGCCTGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSSHTVCSLQGS*CFPARGTGLSL Trigger: CAGAGACAGGCCTGTTCCTCGTGCGGGAAAGCACCAACTACCCTGGAGACTACACACTGTGTGTGAGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
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| CDS CCA 72 bp | CTTCTCTCTCAAGGCTTCAGGCGCTGTCCATTTGACTaGCAGCTTGCCTGTGTCCTGAGTGCTGGAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSQGFRRCPFD*QLACVLSAGGF Trigger: GAAGCCTCCAGCACTCAGGACACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTGAAGCCTTGAGAGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CAA 72 bp | TTCTCCTCCACAATCACACCCAGCAGCTGGACGAGGTaGCTGTGCCGAAGTTGCGTCATGACGGAGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSSTITPSSWTR*LCRSCVMTEAS Trigger: TGAAGCCTCCGTCATGACGCAACTTCGGCACAGCAACCTCGTCCAGCTGCTGGGTGTGATTGTGGAGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS GCA 72 bp | GGCCTGGGCAGTTGCGTCATTCTTGATGCACTTGACTaGAACTTTGTTGCCCCGGTAATCCCCCAGCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLGSCVILDALD*NFVAPVIPQHH Trigger: GTGATGCTGGGGGATTACCGGGGCAACAAAGTTGCAGTCAAGTGCATCAAGAATGACGCAACTGCCCAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CCA 72 bp | TGCCTTCACACCCTCACGCTTCTGGACATAGTTGGCTaGGATGATGCCCTCACGGCCCACTTTGTTTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CLHTLTLLDIVG*DDALTAHFVFG Trigger: GCCAAAAACAAAGTGGGCCGTGAGGGCATCATCCCAGCCAACTATGTCCAGAAGCGTGAGGGTGTGAAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
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| CDS CAA 72 bp | GGGATGATGCCCTCACGGCCCACTTTGTTTTTGGCTTaGTACCAGTTGGGGTCCTTGGTGACAGCCACGATG | + |
|
Preference number: 6 (lower is better) Translates to: GMMPSRPTLFLA*YQLGSLVTATM Trigger: CATCGTGGCTGTCACCAAGGACCCCAACTGGTACAAAGCCAAAAACAAAGTGGGCCGTGAGGGCATCATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
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| CDS CAA 72 bp | TTGGCTGGGATGATGCCCTCACGGCCCACTTTGTTTTaGGCTTTGTACCAGTTGGGGTCCTTGGTGACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LAGMMPSRPTLF*ALYQLGSLVTA Trigger: GGCTGTCACCAAGGACCCCAACTGGTACAAAGCCAAAAACAAAGTGGGCCGTGAGGGCATCATCCCAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
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| CDS CAA 90 bp | CAGTTGGGGTCCTTGGTGACAGCCACGATGGTGAGCACATCTCCTTaGCAGAAGGGAAGGTCTTGCTCAGCAGTGCCATGGAAGTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: QLGSLVTATMVSTSP*QKGRSCSAVPWKLY Trigger: GTACAACTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTGCAAAGGAGATGTGCTCACCATCGTGGCTGTCACCAAGGACCCCAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
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| CDS TCA 72 bp | ATTTCTTCTCTCTCAAGGCTTCAGGCGCTGTCCATTTaGCTGGCAGCTTGCCTGTGTCCTGAGTGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ISSLSRLQALSI*LAACLCPECWR Trigger: CCTCCAGCACTCAGGACACAGGCAAGCTGCCAGTCAAATGGACAGCGCCTGAAGCCTTGAGAGAGAAGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CCA 72 bp | GAAGGTCTTGCTCAGCAGTGCCATGGAAGTTGTACTTaGCAATACATTCTGTACCGGATGGCCAGGCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: EGLAQQCHGSCT*QYILYRMARRP Trigger: AGGCCGCCTGGCCATCCGGTACAGAATGTATTGCCAAGTACAACTTCCATGGCACTGCTGAGCAAGACCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CAA 90 bp | TTGCAGAAGGGAAGGTCTTGCTCAGCAGTGCCATGGAAGTTGTACTaGGCAATACATTCTGTACCGGATGGCCAGGCGGCCTGTATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQKGRSCSAVPWKLY*AIHSVPDGQAACIA Trigger: GGCAATACAGGCCGCCTGGCCATCCGGTACAGAATGTATTGCCAAGTACAACTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CAA 90 bp | TCTCCTTTGCAGAAGGGAAGGTCTTGCTCAGCAGTGCCATGGAAGTaGTACTTGGCAATACATTCTGTACCGGATGGCCAGGCGGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPLQKGRSCSAVPWK*YLAIHSVPDGQAAC Trigger: ACAGGCCGCCTGGCCATCCGGTACAGAATGTATTGCCAAGTACAACTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTGCAAAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS TCA 72 bp | TCACACCCTCACGCTTCTGGACATAGTTGGCTGGGATaGTGCCCTCACGGCCCACTTTGTTTTTGGCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SHPHASGHSWLG*CPHGPLCFWLC Trigger: ACAAAGCCAAAAACAAAGTGGGCCGTGAGGGCATCATCCCAGCCAACTATGTCCAGAAGCGTGAGGGTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS TCA 72 bp | GGTACTCCATGGCTTCACAGACGTCTAATGAGAATTTaGGGAGACAGTCTCCACCTAGCACCGAACGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: GTPWLHRRLMRI*GDSLHLAPNDH Trigger: GTGGTCGTTCGGTGCTAGGTGGAGACTGTCTCCTCAAATTCTCATTAGACGTCTGTGAAGCCATGGAGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS CAA 72 bp | CAGAAGGGAAGGTCTTGCTCAGCAGTGCCATGGAAGTaGTACTTGGCAATACATTCTGTACCGGATGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QKGRSCSAVPWK*YLAIHSVPDGQ Trigger: CTGGCCATCCGGTACAGAATGTATTGCCAAGTACAACTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CAA 90 bp | GACAGCCACGATGGTGAGCACATCTCCTTTGCAGAAGGGAAGGTCTaGCTCAGCAGTGCCATGGAAGTTGTACTTGGCAATACATTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DSHDGEHISFAEGKV*LSSAMEVVLGNTFC Trigger: ACAGAATGTATTGCCAAGTACAACTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTGCAAAGGAGATGTGCTCACCATCGTGGCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CAA 72 bp | GATGGTGAGCACATCTCCTTTGCAGAAGGGAAGGTCTaGCTCAGCAGTGCCATGGAAGTTGTACTTGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: DGEHISFAEGKV*LSSAMEVVLGN Trigger: ATTGCCAAGTACAACTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTGCAAAGGAGATGTGCTCACCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
||
| CDS CAA 72 bp | AGGTACTCCATGGCTTCACAGACGTCTAATGAGAATTaGAGGAGACAGTCTCCACCTAGCACCGAACGACCA | + |
|
Preference number: 6 (lower is better) Translates to: RYSMASQTSNEN*RRQSPPSTERP Trigger: TGGTCGTTCGGTGCTAGGTGGAGACTGTCTCCTCAAATTCTCATTAGACGTCTGTGAAGCCATGGAGTACCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000217314.2 |
||
| CDS GCA 72 bp | CATCTCCTTTGCAGAAGGGAAGGTCTTGCTCAGCAGTaGCATGGAAGTTGTACTTGGCAATACATTCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: HLLCRREGLAQQ*HGSCTWQYILY Trigger: GTACAGAATGTATTGCCAAGTACAACTTCCATGGCACTGCTGAGCAAGACCTTCCCTTCTGCAAAGGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000034863.8 ENSMUST00000215396.2 ENSMUST00000216934.2 ENSMUST00000216979.2 ENSMUST00000217128.2 ENSMUST00000217314.2 |
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