Pregenerated sensors for CSF2RB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071713Ensembl transcript IDs: ENSMUST00000096355.4, ENSMUST00000229034.2, ENSMUST00000229678.2, ENSMUST00000230264.3
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGGGGCTCACCTGAGACTCCCACCTTTCACACAGAGCCAGAAATGTaGTGTATTACCAATGCCTGTGGTGGACAAGCCGACCTCAGCAGT | + |
Preference number: 1 (lower is better) Translates to: RGSPETPTFHTEPEM*CITNACGGQADLSS Trigger: ACTGCTGAGGTCGGCTTGTCCACCACAGGCATTGGTAATACAGCACATTTCTGGCTCTGTGTGAAAGGTGGGAGTCTCAGGTGAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR CCA 90 bp | CACTTACAGCAAAGACCCCTGCAAACAGGGACCCAAAGACAGGTGTaGCTCGGCAACCCATCTCATAGCAATGCAGACACGCAATGGCTG | + |
Preference number: 1 (lower is better) Translates to: HLQQRPLQTGTQRQV*LGNPSHSNADTQWL Trigger: CAGCCATTGCGTGTCTGCATTGCTATGAGATGGGTTGCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR GCA 90 bp | AAAGAACATAAACAAAGGCACGTGTGCACTTACAGCAAAGACCCCTaGAAACAGGGACCCAAAGACAGGTGTGGCTCGGCAACCCATCTC | + |
Preference number: 1 (lower is better) Translates to: KEHKQRHVCTYSKDP*KQGPKDRCGSATHL Trigger: GAGATGGGTTGCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTGCACACGTGCCTTTGTTTATGTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR GCA 90 bp | GCTCAACTTCCAAGTCTACTTCCTCGCTACCACCCAAAAAGCCAATaGTCGAGACACACACAAAGGCCATGTGCAAACGTGACCATGAAC | + |
Preference number: 1 (lower is better) Translates to: AQLPSLLPRYHPKSQ*SRHTQRPCANVTMN Trigger: GTTCATGGTCACGTTTGCACATGGCCTTTGTGTGTGTCTCGAGCATTGGCTTTTTGGGTGGTAGCGAGGAAGTAGACTTGGAAGTTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR TCA 90 bp | TCCCTCCAGCCTGGCCATAGCTGTGTCCAGCTTTGTGCACATCAGTaGTTTCTGTATATAAGGAGGGTACCAAGTACCCTCTACAAGGTT | + |
Preference number: 1 (lower is better) Translates to: SLQPGHSCVQLCAHQ*FLYIRRVPSTLYKV Trigger: AACCTTGTAGAGGGTACTTGGTACCCTCCTTATATACAGAAATCACTGATGTGCACAAAGCTGGACACAGCTATGGCCAGGCTGGAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR TCA 90 bp | GTTAGTGGTTTTCTTTGCTGCAATGAACAGAGACCAAGGGACATTTaGTCTGCCACATTCTATGTCTGCCATCATGTGAGTGAGGCCAGG | + |
Preference number: 1 (lower is better) Translates to: VSGFLCCNEQRPRDI*SATFYVCHHVSEAR Trigger: CCTGGCCTCACTCACATGATGGCAGACATAGAATGTGGCAGATCAAATGTCCCTTGGTCTCTGTTCATTGCAGCAAAGAAAACCACTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR GCA 90 bp | TTTAGACACAGAAGGAACCAGAAAGAACATAAACAAAGGCACGTGTaGACTTACAGCAAAGACCCCTGCAAACAGGGACCCAAAGACAGG | + |
Preference number: 1 (lower is better) Translates to: FRHRRNQKEHKQRHV*TYSKDPCKQGPKDR Trigger: CCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTGCACACGTGCCTTTGTTTATGTTCTTTCTGGTTCCTTCTGTGTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR TCA 90 bp | ACACAAAGGCCATGTGCAAACGTGACCATGAACAAACAACTCCAGTaGGAACAGAATGAGGTAATGGCATTGTGCATGGATTGTCAAGAG | + |
Preference number: 1 (lower is better) Translates to: TQRPCANVTMNKQLQ*EQNEVMALCMDCQE Trigger: CTCTTGACAATCCATGCACAATGCCATTACCTCATTCTGTTCTCACTGGAGTTGTTTGTTCATGGTCACGTTTGCACATGGCCTTTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR TCA 90 bp | CTCATCCCCACTCCAACAGGTCAGAGGAATAGGAAGGAAGTTCCCATAGAAGGCGTGCCAGGCTGCTGGTaGGATTGGGAGGAGACAGAC | + |
Preference number: 2 (lower is better) Translates to: LIPTPTGQRNRKEVPIEGVPGCW*DWEETD Trigger: GTCTGTCTCCTCCCAATCTCACCAGCAGCCTGGCAC...GCCTTCTATGGGAACTTCCTTCCTATTCCTCTGACCTGTTGGAGTGGGGATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR TCA 90 bp | ACTACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTAGTGCTCCTAACCTCTaGGCCATCTCTCCAGCCCTC | + |
Preference number: 2 (lower is better) Translates to: TTDGCEPPCSCWELNSEPSAPNL*AISPAL Trigger: GAGGGCTGGAGAGATGGCTCAGAGGTTAGGAGCACT...AGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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3UTR CAA 90 bp | CTAGACTTAGTATCTGGGTGTGCTGTCCAGGATCCACAACTAAGCTaGTCTGCAGTTGAGACCATGAGTTCTAGACACACAGCCTTCCCA | + |
Preference number: 2 (lower is better) Translates to: LDLVSGCAVQDPQLS*SAVETMSSRHTAFP Trigger: TGGGAAGGCTGTGTGTCTAGAACTCATGGTCTCAACTGCAGACAAGCTTAGTTGTGGATCCTGGACAGCACACCCAGATACTAAGTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR GCA 90 bp | TGCAAGGCACTTTGGCATTCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCACACAGCCTTCCCATTaGTTCTCATCCCTCCAGCCT | + |
Preference number: 2 (lower is better) Translates to: CKALWHSHLNMEATPVCFTQPSH*FSSLQP Trigger: AGGCTGGAGGGATGAGAAGCAATGGGAAGGCTGTGT...GAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGAATGCCAAAGTGCCTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR TCA 90 bp | CACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAGCACAAAACTGTTCATaGGCTCAACTTCCAAGTCTA | + |
Preference number: 2 (lower is better) Translates to: HVWPTRGHVGRAIQSHPKAQNCS*AQLPSL Trigger: TAGACTTGGAAGTTGAGCTCATGAACAGTTTTGTGC...TTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR CCA 90 bp | TCCAGGTCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTTACCAATGCCTGTGGTaGACAAGCCGACCTCAGCAG | + |
Preference number: 2 (lower is better) Translates to: SRSIEHIKTELCREIMCSYQCLW*TSRPQQ Trigger: CTGCTGAGGTCGGCTTGTCCACCACAGGCATTGGTA...AGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGACCTGGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR TCA 90 bp | TCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTAGAAAAGTGCCAGGCTGCTGGTaGGATTGGGAGGAGACAGAC | + |
Preference number: 2 (lower is better) Translates to: SIEHIKTELCREIMCSRKVPGCW*DWEETD Trigger: GTCTGTCTCCTCCCAATCTCACCAGCAGCCTGGCAC...TTTTCTAGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR GCA 90 bp | TCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCTCTAGAGTGGTCACTTTGGCCACATTCTATGTCTaGCATCATGTGAGTGAGGCC | + |
Preference number: 2 (lower is better) Translates to: SHLNMEATPVCFSRVVTLATFYV*HHVSEA Trigger: GGCCTCACTCACATGATGGCAGACATAGAATGTGGC...CAAAGTGACCACTCTAGAGAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR GCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGGTGCTGTATTACCAATaGCTGTGGTGGACAAGCCGA | + |
Preference number: 2 (lower is better) Translates to: ELCREIMCSRKLQVSHSRVLYYQ*LWWTSR Trigger: TCGGCTTGTCCACCACAGGCATTGGTAATACAGCAC...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR GCA 90 bp | ACTCAAGATGTTAGTGGTTTTCTTTGCTGCAATGAACAGAGACCAAGGGACATTACACAGCCTTCCCATTaGTTCTCATCCCTCCAGCCT | + |
Preference number: 2 (lower is better) Translates to: TQDVSGFLCCNEQRPRDITQPSH*FSSLQP Trigger: AGGCTGGAGGGATGAGAAGCAATGGGAAGGCTGTGT...AATGTCCCTTGGTCTCTGTTCATTGCAGCAAAGAAAACCACTAACATCTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR GCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGCTGACAGAGCTGGTGTaGCTCCTGCACAAAATTAGG | + |
Preference number: 2 (lower is better) Translates to: ELCREIMCSRKLQVSHSRLTELV*LLHKIR Trigger: CCTAATTTTGTGCAGGAGGCACACCAGCTCTGTCAG...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR GCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGTACAGCAAAGACCCCTaGAAACAGGGACCCAAAGAC | + |
Preference number: 2 (lower is better) Translates to: ELCREIMCSRKLQVSHSRYSKDP*KQGPKD Trigger: GTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTA...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR CCA 90 bp | TCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCTCTAGAGTGGTCACTTTGTCTAGACTTAGTATCTaGGTGTGCTGTCCAGGATCC | + |
Preference number: 2 (lower is better) Translates to: SHLNMEATPVCFSRVVTLSRLSI*VCCPGS Trigger: GGATCCTGGACAGCACACCCAGATACTAAGTCTAGA...CAAAGTGACCACTCTAGAGAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR CCA 90 bp | TCCAGGTCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTCCACAAGAGGCCATGTaGGAAGAGCTATTCAGTCTC | + |
Preference number: 2 (lower is better) Translates to: SRSIEHIKTELCREIMCSPQEAM*EELFSL Trigger: GAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGG...AGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGACCTGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR TCA 90 bp | GAGACACACACAAAGGCCATGTGCAAACGTGACCATGAACAAACAACTCCAGTGCTTTGTGCACATCAGTaGTTTCTGTATATAAGGAGG | + |
Preference number: 2 (lower is better) Translates to: ETHTKAMCKRDHEQTTPVLCAHQ*FLYIRR Trigger: CCTCCTTATATACAGAAATCACTGATGTGCACAAAG...CACTGGAGTTGTTTGTTCATGGTCACGTTTGCACATGGCCTTTGTGTGTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR TCA 90 bp | TCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCTCTAGAGTGGTCACTTTGAGACCAAGGGACATTTaGTCTGCCACATTCTATGTC | + |
Preference number: 2 (lower is better) Translates to: SHLNMEATPVCFSRVVTLRPRDI*SATFYV Trigger: GACATAGAATGTGGCAGATCAAATGTCCCTTGGTCT...CAAAGTGACCACTCTAGAGAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR CCA 90 bp | TCCAGGTCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTTCTAGACTTAGTATCTaGGTGTGCTGTCCAGGATCC | + |
Preference number: 2 (lower is better) Translates to: SRSIEHIKTELCREIMCSSRLSI*VCCPGS Trigger: GGATCCTGGACAGCACACCCAGATACTAAGTCTAGA...AGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGACCTGGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR CCA 90 bp | AAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATAAACAAAATGCAGACACGCAATaGCTGACAGAGCTGGTGTGC | + |
Preference number: 2 (lower is better) Translates to: KSLTQGFRHRRNQKEHKQNADTQ*LTELVC Trigger: GCACACCAGCTCTGTCAGCCATTGCGTGTCTGCATT...TTGTTTATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR CCA 90 bp | AATTATTTTATTTATGAGTACACTGTTGCTGTCTCCAAACACACCAGAAGAGGGGTGCCCAAGCATCCATaGGCAGAAAGGGTAGAGTCC | + |
Preference number: 2 (lower is better) Translates to: NYFIYEYTVAVSKHTRRGVPKHP*AERVES Trigger: GGACTCTACCCTTTCTGCCCATGGATGCTTGGGCAC...CCCTCTTCTGGTGTGTTTGGAGACAGCAACAGTGTACTCATAAATAAAATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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3UTR-3UTR TCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGCCAGTGAGAACAGAATaGGGTAATGGCATTGTGCAT | + |
Preference number: 2 (lower is better) Translates to: ELCREIMCSRKLQVSHSRPVRTE*GNGIVH Trigger: ATGCACAATGCCATTACCTCATTCTGTTCTCACTGG...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR GCA 90 bp | ACAATGTCCATTGACTCCAGGTCCATAGAACACATCAAGACTGAACTCTGTAGAGAGGTAATGGCATTGTaGATGGATTGTCAAGAGGGT | + |
Preference number: 2 (lower is better) Translates to: TMSIDSRSIEHIKTELCREVMAL*MDCQEG Trigger: ACCCTCTTGACAATCCATGCACAATGCCATTACCTC...TCTACAGAGTTCAGTCTTGATGTGTTCTATGGACCTGGAGTCAATGGACATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR TCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGCTTTGTGCACATCAGTaGTTTCTGTATATAAGGAGG | + |
Preference number: 2 (lower is better) Translates to: ELCREIMCSRKLQVSHSRLCAHQ*FLYIRR Trigger: CCTCCTTATATACAGAAATCACTGATGTGCACAAAG...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR TCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGAACAAACAACTCCAGTaGGAACAGAATGAGGTAATG | + |
Preference number: 2 (lower is better) Translates to: ELCREIMCSRKLQVSHSRNKQLQ*EQNEVM Trigger: CATTACCTCATTCTGTTCTCACTGGAGTTGTTTGTT...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR-3UTR GCA 90 bp | TCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTAGAAAAAAACAAAGGCACGTGTaGACTTACAGCAAAGACCCC | + |
Preference number: 2 (lower is better) Translates to: SIEHIKTELCREIMCSRKKQRHV*TYSKDP Trigger: GGGGTCTTTGCTGTAAGTGCACACGTGCCTTTGTTT...TTTTCTAGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR TCA 72 bp | TGGCCAAGGGCCACAGTCTCACAGCAGACCCTCATCTaGGGCCGGTGGGAGCACAGGTATCCAGGCTTTGCT | + |
Preference number: 3 (lower is better) Translates to: WPRATVSQQTLI*GRWEHRYPGFA Trigger: AGCAAAGCCTGGATACCTGTGCTCCCACCGGCCTCAGATGAGGGTCTGCTGTGAGACTGTGGCCCTTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR TCA 72 bp | GGTAATGGCATTGTGCATGGATTGTCAAGAGGGTGGTaGTGGCCAAGGGCCACAGTCTCACAGCAGACCCTC | + |
Preference number: 3 (lower is better) Translates to: GNGIVHGLSRGW*WPRATVSQQTL Trigger: GAGGGTCTGCTGTGAGACTGTGGCCCTTGGCCATCACCACCCTCTTGACAATCCATGCACAATGCCATTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR CCA 72 bp | CAAAGACCCCTGCAAACAGGGACCCAAAGACAGGTGTaGCTCGGCAACCCATCTCATAGCAATGCAGACACG | + |
Preference number: 3 (lower is better) Translates to: QRPLQTGTQRQV*LGNPSHSNADT Trigger: CGTGTCTGCATTGCTATGAGATGGGTTGCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR GCA 72 bp | AAACAAAGGCACGTGTGCACTTACAGCAAAGACCCCTaGAAACAGGGACCCAAAGACAGGTGTGGCTCGGCA | + |
Preference number: 3 (lower is better) Translates to: KQRHVCTYSKDP*KQGPKDRCGSA Trigger: TGCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTGCACACGTGCCTTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR GCA 72 bp | TGTAGACCAGGCTGGACTCAAACTCAGAAATCTGCCTaGCTCTGCCTCCAGAGTGCTGGGATTAAGGGAATG | + |
Preference number: 3 (lower is better) Translates to: CRPGWTQTQKSA*LCLQSAGIKGM Trigger: CATTCCCTTAATCCCAGCACTCTGGAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGTCCAGCCTGGTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR GCA 72 bp | CCTGAGACTCCCACCTTTCACACAGAGCCAGAAATGTaGTGTATTACCAATGCCTGTGGTGGACAAGCCGAC | + |
Preference number: 3 (lower is better) Translates to: PETPTFHTEPEM*CITNACGGQAD Trigger: GTCGGCTTGTCCACCACAGGCATTGGTAATACAGCACATTTCTGGCTCTGTGTGAAAGGTGGGAGTCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR GCA 72 bp | CCAAGTCTACTTCCTCGCTACCACCCAAAAAGCCAATaGTCGAGACACACACAAAGGCCATGTGCAAACGTG | + |
Preference number: 3 (lower is better) Translates to: PSLLPRYHPKSQ*SRHTQRPCANV Trigger: CACGTTTGCACATGGCCTTTGTGTGTGTCTCGAGCATTGGCTTTTTGGGTGGTAGCGAGGAAGTAGACTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR TCA 72 bp | ACATTTGATCTGCCACATTCTATGTCTGCCATCATGTaGGTGAGGCCAGGGGATAGGACAGACCAGATCCAG | + |
Preference number: 3 (lower is better) Translates to: TFDLPHSMSAIM*VRPGDRTDQIQ Trigger: CTGGATCTGGTCTGTCCTATCCCCTGGCCTCACTCACATGATGGCAGACATAGAATGTGGCAGATCAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR GCA 72 bp | CGAACAGCTCAGCTGTCTAGACTTAGTATCTGGGTGTaGTGTCCAGGATCCACAACTAAGCTTGTCTGCAGT | + |
Preference number: 3 (lower is better) Translates to: RTAQLSRLSIWV*CPGSTTKLVCS Trigger: ACTGCAGACAAGCTTAGTTGTGGATCCTGGACAGCACACCCAGATACTAAGTCTAGACAGCTGAGCTGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR TCA 72 bp | CCTGGCCATAGCTGTGTCCAGCTTTGTGCACATCAGTaGTTTCTGTATATAAGGAGGGTACCAAGTACCCTC | + |
Preference number: 3 (lower is better) Translates to: PGHSCVQLCAHQ*FLYIRRVPSTL Trigger: GAGGGTACTTGGTACCCTCCTTATATACAGAAATCACTGATGTGCACAAAGCTGGACACAGCTATGGCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR TCA 72 bp | CAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTaGACTCAGAACCTTTGGAAGAGCAGTAAGTGCTCC | + |
Preference number: 3 (lower is better) Translates to: QMVVNHHVVAGS*TQNLWKSSKCS Trigger: GGAGCACTTACTGCTCTTCCAAAGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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3UTR-3UTR CAA 90 bp | GAGACACACACAAAGGCCATGTGCAAACGTGACCATGAACAAACAACTCCAGTGAATGAGGTAATGGCATaGTGCATGGATTGTCAAGAG | + |
Preference number: 3 (lower is better) Translates to: ETHTKAMCKRDHEQTTPVNEVMA*CMDCQE Trigger: CTCTTGACAATCCATGCACAATGCCATTACCTCATT...CACTGGAGTTGTTTGTTCATGGTCACGTTTGCACATGGCCTTTGTGTGTGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR TCA 72 bp | CGTGACCATGAACAAACAACTCCAGTGAGAACAGAATaGGGTAATGGCATTGTGCATGGATTGTCAAGAGGG | + |
Preference number: 3 (lower is better) Translates to: RDHEQTTPVRTE*GNGIVHGLSRG Trigger: CCCTCTTGACAATCCATGCACAATGCCATTACCTCATTCTGTTCTCACTGGAGTTGTTTGTTCATGGTCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR GCA 72 bp | AAAAAGCCAATGCTCGAGACACACACAAAGGCCATGTaGAAACGTGACCATGAACAAACAACTCCAGTGAGA | + |
Preference number: 3 (lower is better) Translates to: KKPMLETHTKAM*KRDHEQTTPVR Trigger: TCTCACTGGAGTTGTTTGTTCATGGTCACGTTTGCACATGGCCTTTGTGTGTGTCTCGAGCATTGGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
||
3UTR TCA 72 bp | CCATGTGCAAACGTGACCATGAACAAACAACTCCAGTaGGAACAGAATGAGGTAATGGCATTGTGCATGGAT | + |
Preference number: 3 (lower is better) Translates to: PCANVTMNKQLQ*EQNEVMALCMD Trigger: ATCCATGCACAATGCCATTACCTCATTCTGTTCTCACTGGAGTTGTTTGTTCATGGTCACGTTTGCACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
||
3UTR CCA 72 bp | TCTTATGCAAGGCACTTTGGCATTCACATCTTAACATaGAGGCCACTCCTGTTTGTTTCTCTAGAGTGGTCA | + |
Preference number: 3 (lower is better) Translates to: SYARHFGIHILT*RPLLFVSLEWS Trigger: TGACCACTCTAGAGAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGAATGCCAAAGTGCCTTGCATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
||
3UTR TCA 72 bp | TTTCTTTGCTGCAATGAACAGAGACCAAGGGACATTTaGTCTGCCACATTCTATGTCTGCCATCATGTGAGT | + |
Preference number: 3 (lower is better) Translates to: FLCCNEQRPRDI*SATFYVCHHVS Trigger: ACTCACATGATGGCAGACATAGAATGTGGCAGATCAAATGTCCCTTGGTCTCTGTTCATTGCAGCAAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCAGAGTGCTGGGATTAAGGGAATGCGCCAGGCTCCCACCCACCTaGGGGGAACCCAGCTGGTCT | + |
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLRECARLPPT*GEPSWS Trigger: AGACCAGCTGGGTTCCCCCCAGGTGGGTGGGAGCCT...GGCGCATTCCCTTAATCCCAGCACTCTGGAGGCAGAGGCAGGCAGATTTCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CACAGCAGACCCTCATCTGAGGCCGGTGGGAGCACAGGTATCCAGGCTTTGCTCTGCACATCCATAGCCTaGCCCTGCCCCATCACCTGG | + |
Preference number: 4 (lower is better) Translates to: HSRPSSEAGGSTGIQALLCTSIA*PCPITW Trigger: CCAGGTGATGGGGCAGGGCCAGGCTATGGATGTGCA...GAGCAAAGCCTGGATACCTGTGCTCCCACCGGCCTCAGATGAGGGTCTGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CACAGCAGACCCTCATCTGAGGCCGGTGGGAGCACAGGTATCCAGGCTTTGCTCTATGGGCAGAGTCACTaGGTTGTCCCGTGCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: HSRPSSEAGGSTGIQALLYGQSH*VVPCLL Trigger: CAGGAGGCACGGGACAACCCAGTGACTCTGCCCATA...GAGCAAAGCCTGGATACCTGTGCTCCCACCGGCCTCAGATGAGGGTCTGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
||
CDS-3UTR TCA 90 bp | CAGGCTGGACTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCAGAGTGCTGGGAGGGCAAGTGGCACCATaGGCTGGATGCCCAGATCAC | + |
Preference number: 4 (lower is better) Translates to: QAGLKLRNLPASASRVLGGQVAP*AGCPDH Trigger: GTGATCTGGGCATCCAGCTCATGGTGCCACTTGCCC...TCCCAGCACTCTGGAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGTCCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
||
CDS-3UTR CCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCAGAGTGCTGGGATTAAGGGAATGCGCCCTGCTCTGTGGCCCCTaGAGAGCGGGGTTCTTAGTG | + |
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLRECALLCGP*RAGFLV Trigger: CACTAAGAACCCCGCTCTCCAGGGGCCACAGAGCAG...GGCGCATTCCCTTAATCCCAGCACTCTGGAGGCAGAGGCAGGCAGATTTCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | CACAGCAGACCCTCATCTGAGGCCGGTGGGAGCACAGGTATCCAGGCTTTGCTCTGTTCTTGGTCAGGTTaGGGGTTGGAGGCTCCATCT | + |
Preference number: 4 (lower is better) Translates to: HSRPSSEAGGSTGIQALLCSWSG*GLEAPS Trigger: AGATGGAGCCTCCAACCCTCAACCTGACCAAGAACA...GAGCAAAGCCTGGATACCTGTGCTCCCACCGGCCTCAGATGAGGGTCTGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | CTCATCCCCACTCCAACAGGTCAGAGGAATAGGAAGGAAGTTCCCATAGAAGGCCACAGAAGGGCTCCCTaGGGTCTCCAGGCTGGACCC | + |
Preference number: 4 (lower is better) Translates to: LIPTPTGQRNRKEVPIEGHRRAP*GLQAGP Trigger: GGGTCCAGCCTGGAGACCTCAGGGAGCCCTTCTGTG...GCCTTCTATGGGAACTTCCTTCCTATTCCTCTGACCTGTTGGAGTGGGGATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | CACTTACAGCAAAGACCCCTGCAAACAGGGACCCAAAGACAGGTGTGGCTCGGCAGGGACTTGAAAAACTaGATGGCTGGCGCCTGGGGC | + |
Preference number: 4 (lower is better) Translates to: HLQQRPLQTGTQRQVWLGRDLKN*MAGAWG Trigger: GCCCCAGGCGCCAGCCATTCAGTTTTTCAAGTCCCT...GCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | AAGAGAAAAGCACAGGTGGGGTATTGCCATGTCAGGGCTGGGAGCAAGGAGGAGCTGCTCTGTGGCCCCTaGAGAGCGGGGTTCTTAGTG | + |
Preference number: 4 (lower is better) Translates to: KRKAQVGYCHVRAGSKEELLCGP*RAGFLV Trigger: CACTAAGAACCCCGCTCTCCAGGGGCCACAGAGCAG...CTCCTCCTTGCTCCCAGCCCTGACATGGCAATACCCCACCTGTGCTTTTCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAAGGCTCCCACCCACCTaGGGGGAACCCAGCTGGTCT | + |
Preference number: 4 (lower is better) Translates to: HVWPTRGHVGRAIQSHPKRLPPT*GEPSWS Trigger: AGACCAGCTGGGTTCCCCCCAGGTGGGTGGGAGCCT...TTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CACTTACAGCAAAGACCCCTGCAAACAGGGACCCAAAGACAGGTGTGGCTCGGCCTGAGGTCTCCAGGCTaGACCCACACTGCACATCCA | + |
Preference number: 4 (lower is better) Translates to: HLQQRPLQTGTQRQVWLGLRSPG*THTAHP Trigger: TGGATGTGCAGTGTGGGTCCAGCCTGGAGACCTCAG...GCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | CACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAGGCTGGGAGTCCCAGTaGACCTCTGGGCTCCATCTG | + |
Preference number: 4 (lower is better) Translates to: HVWPTRGHVGRAIQSHPKGWESQ*TSGLHL Trigger: CAGATGGAGCCCAGAGGTTCACTGGGACTCCCAGCC...TTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | AAGAGAAAAGCACAGGTGGGGTATTGCCATGTCAGGGCTGGGAGCAAGGAGGAGAGGGACTTGAAAAACTaGATGGCTGGCGCCTGGGGC | + |
Preference number: 4 (lower is better) Translates to: KRKAQVGYCHVRAGSKEERDLKN*MAGAWG Trigger: GCCCCAGGCGCCAGCCATTCAGTTTTTCAAGTCCCT...CTCCTCCTTGCTCCCAGCCCTGACATGGCAATACCCCACCTGTGCTTTTCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | AAGAGAAAAGCACAGGTGGGGTATTGCCATGTCAGGGCTGGGAGCAAGGAGGAGAGGGACCGTTTCTTCTaGCTCTGTCACCCCGTGTCC | + |
Preference number: 4 (lower is better) Translates to: KRKAQVGYCHVRAGSKEERDRFF*LCHPVS Trigger: GGACACGGGGTGACAGAGGCAGAAGAAACGGTCCCT...CTCCTCCTTGCTCCCAGCCCTGACATGGCAATACCCCACCTGTGCTTTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | GCCCAAGCATCCATGGGCAGAAAGGGTAGAGTCCCAGATCATGTCTCCACCCATGTGTCTGGCTCCAGCTaGGAGAGGTCCATGCTATGG | + |
Preference number: 4 (lower is better) Translates to: AQASMGRKGRVPDHVSTHVSGSS*ERSMLW Trigger: CCATAGCATGGACCTCTCCCAGCTGGAGCCAGACAC...ATGGGTGGAGACATGATCTGGGACTCTACCCTTTCTGCCCATGGATGCTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CCA 90 bp | AAGAGAAAAGCACAGGTGGGGTATTGCCATGTCAGGGCTGGGAGCAAGGAGGAGGGAACCCAGCTGGTCTaGGAGATCAGGCAGAGAGTG | + |
Preference number: 4 (lower is better) Translates to: KRKAQVGYCHVRAGSKEEGTQLV*EIRQRV Trigger: CACTCTCTGCCTGATCTCCCAGACCAGCTGGGTTCC...CTCCTCCTTGCTCCCAGCCCTGACATGGCAATACCCCACCTGTGCTTTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | AAGAGAAAAGCACAGGTGGGGTATTGCCATGTCAGGGCTGGGAGCAAGGAGGAGGGCCCCCAGAGCTTATaGGCAGAGTCACTGGGTTGT | + |
Preference number: 4 (lower is better) Translates to: KRKAQVGYCHVRAGSKEEGPQSL*AESLGC Trigger: ACAACCCAGTGACTCTGCCCATAAGCTCTGGGGGCC...CTCCTCCTTGCTCCCAGCCCTGACATGGCAATACCCCACCTGTGCTTTTCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | CAGGCTGGACTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCAGAGTGCTGGGAGATAGAGGGTCATGTTaGTTAGCCCCTGGGCATCCT | + |
Preference number: 4 (lower is better) Translates to: QAGLKLRNLPASASRVLGDRGSC*LAPGHP Trigger: AGGATGCCCAGGGGCTAATCAACATGACCCTCTATC...TCCCAGCACTCTGGAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGTCCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | GCACAGGTATCCAGGCTTTGCTCTGGAGGGAGAACTAACGAACAGCTCAGCTGTAGGGACCGTTTCTTCTaGCTCTGTCACCCCGTGTCC | + |
Preference number: 4 (lower is better) Translates to: AQVSRLCSGGRTNEQLSCRDRFF*LCHPVS Trigger: GGACACGGGGTGACAGAGGCAGAAGAAACGGTCCCT...ACAGCTGAGCTGTTCGTTAGTTCTCCCTCCAGAGCAAAGCCTGGATACCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCAGAGTGCTGGGATTAAGGGAATGCGCCTATGACTCCCCCTGTTaGTCAGCAAGAAGCCTGCTC | + |
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLRECAYDSPC*SARSLL Trigger: GAGCAGGCTTCTTGCTGAGCAACAGGGGGAGTCATA...GGCGCATTCCCTTAATCCCAGCACTCTGGAGGCAGAGGCAGGCAGATTTCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAATGCACATCCATAGCCTaGCCCTGCCCCATCACCTGG | + |
Preference number: 4 (lower is better) Translates to: HVWPTRGHVGRAIQSHPKCTSIA*PCPITW Trigger: CCAGGTGATGGGGCAGGGCCAGGCTATGGATGTGCA...TTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CACTTACAGCAAAGACCCCTGCAAACAGGGACCCAAAGACAGGTGTGGCTCGGCCATGCTCAGCTCAACTaGAGGGTTCTCCTTTGGCTC | + |
Preference number: 4 (lower is better) Translates to: HLQQRPLQTGTQRQVWLGHAQLN*RVLLWL Trigger: GAGCCAAAGGAGAACCCTCCAGTTGAGCTGAGCATG...GCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | ACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAAGGGGACTTGGCAGCCTaGCTCACACTTGGAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: TCGPQEAMWEELFSLIQKGDLAA*LTLGGS Trigger: GCTGCCTCCAAGTGTGAGCCAGGCTGCCAAGTCCCC...TTTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAACAGGAGGAGCAGGATaGCCTGGAGGGGACTTGGCA | + |
Preference number: 4 (lower is better) Translates to: HVWPTRGHVGRAIQSHPKTGGAG*PGGDLA Trigger: TGCCAAGTCCCCTCCAGGCCATCCTGCTCCTCCTGT...TTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | GCCCAAGCATCCATGGGCAGAAAGGGTAGAGTCCCAGATCATGTCTCCACCCATTGTTCTTGGTCAGGTTaGGGGTTGGAGGCTCCATCT | + |
Preference number: 4 (lower is better) Translates to: AQASMGRKGRVPDHVSTHCSWSG*GLEAPS Trigger: AGATGGAGCCTCCAACCCTCAACCTGACCAAGAACA...ATGGGTGGAGACATGATCTGGGACTCTACCCTTTCTGCCCATGGATGCTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CCA 90 bp | TGCAAGGCACTTTGGCATTCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCAGCGGGTGTAGACACTaGCCCCCGGCGGCTCCTTCA | + |
Preference number: 4 (lower is better) Translates to: CKALWHSHLNMEATPVCFSGCRH*PPAAPS Trigger: TGAAGGAGCCGCCGGGGGCCAGTGTCTACACCCGCT...GAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGAATGCCAAAGTGCCTTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | ACTACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTAGCGGGTGTAGACACTaGCCCCCGGCGGCTCCTTCA | + |
Preference number: 4 (lower is better) Translates to: TTDGCEPPCSCWELNSEPSGCRH*PPAAPS Trigger: TGAAGGAGCCGCCGGGGGCCAGTGTCTACACCCGCT...AGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CCA 90 bp | CACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAACTGAGGTCTCCAGGCTaGACCCACACTGCACATCCA | + |
Preference number: 4 (lower is better) Translates to: HVWPTRGHVGRAIQSHPKLRSPG*THTAHP Trigger: TGGATGTGCAGTGTGGGTCCAGCCTGGAGACCTCAG...TTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | TCACTTTGTAGACCAGGCTGGACTCAAACTCAGAAATCTGCCTGCCTCTGCCTCTATGGGCAGAGTCACTaGGTTGTCCCGTGCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: SLCRPGWTQTQKSACLCLYGQSH*VVPCLL Trigger: CAGGAGGCACGGGACAACCCAGTGACTCTGCCCATA...GAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGTCCAGCCTGGTCTACAAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | TCACTTTGTAGACCAGGCTGGACTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCGCCCAGCTGCAGATaGTGTGGTTGGTGTAGTCAT | + |
Preference number: 4 (lower is better) Translates to: SLCRPGWTQTQKSACLCLPPSCR*CGWCSH Trigger: ATGACTACACCAACCACATCATCTGCAGCTGGGCGG...GAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGTCCAGCCTGGTCTACAAAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | CTCATCCCCACTCCAACAGGTCAGAGGAATAGGAAGGAAGTTCCCATAGAAGGCCTAGGTTCTCTGTCTTaGTGTCCTCCCAGCTGTCCG | + |
Preference number: 4 (lower is better) Translates to: LIPTPTGQRNRKEVPIEGLGSLS*CPPSCP Trigger: CGGACAGCTGGGAGGACAGCAAGACAGAGAACCTAG...GCCTTCTATGGGAACTTCCTTCCTATTCCTCTGACCTGTTGGAGTGGGGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | ACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTTTGTGGCGAAGGCTGCCATaGTGCCAGGAGGCCAGAGAC | + |
Preference number: 4 (lower is better) Translates to: TDGCEPPCSCWELNSEPLWRRLP*CQEARD Trigger: GTCTCTGGCCTCCTGGCAGCATGGCAGCCTTCGCCA...CAAAGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR GCA 90 bp | CTCATCCCCACTCCAACAGGTCAGAGGAATAGGAAGGAAGTTCCCATAGAAGGCCCTCCTGTTCCTCCATaGTCAGCTCAACTGGAGGGT | + |
Preference number: 4 (lower is better) Translates to: LIPTPTGQRNRKEVPIEGPPVPP*SAQLEG Trigger: ACCCTCCAGTTGAGCTGAGCATGGAGGAACAGGAGG...GCCTTCTATGGGAACTTCCTTCCTATTCCTCTGACCTGTTGGAGTGGGGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | ACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAAGGTGGCTGCACATTCTaGGCAAGTGGCACCATGAGC | + |
Preference number: 4 (lower is better) Translates to: TCGPQEAMWEELFSLIQKGGCTF*ASGTMS Trigger: GCTCATGGTGCCACTTGCCCAGAATGTGCAGCCACC...TTTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CACTTACAGCAAAGACCCCTGCAAACAGGGACCCAAAGACAGGTGTGGCTCGGCTTGACAGACAAGTCCTaGACTAGGTCCTCAGTCTCA | + |
Preference number: 4 (lower is better) Translates to: HLQQRPLQTGTQRQVWLGLTDKS*TRSSVS Trigger: TGAGACTGAGGACCTAGTCCAGGACTTGTCTGTCAA...GCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | ACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAACACACCTTCCCAGACTaGCTATTGTCCCAAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: TCGPQEAMWEELFSLIQKHTFPD*LLSQGG Trigger: GCCCCCTTGGGACAATAGCCAGTCTGGGAAGGTGTG...TTTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | TCACTTTGTAGACCAGGCTGGACTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCATCAAAGAAGCATTaGAGGTTCTGTGGCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: SLCRPGWTQTQKSACLCLPSKKH*RFCGWA Trigger: GGCCCAGCCACAGAACCTTCAATGCTTCTTTGATGG...GAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGTCCAGCCTGGTCTACAAAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | CACTTACAGCAAAGACCCCTGCAAACAGGGACCCAAAGACAGGTGTGGCTCGGCCTCTATAGTGAGAGGTaGCACGTTGTTGTCTTCCAA | + |
Preference number: 4 (lower is better) Translates to: HLQQRPLQTGTQRQVWLGLYSER*HVVVFQ Trigger: TTGGAAGACAACAACGTGTCACCTCTCACTATAGAG...GCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGCACAGAAGGGCTCCCTaGGGTCTCCAGGCTGGACCC | + |
Preference number: 4 (lower is better) Translates to: ELCREIMCSRKLQVSHSRHRRAP*GLQAGP Trigger: GGGTCCAGCCTGGAGACCTCAGGGAGCCCTTCTGTG...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | CTCATCCCCACTCCAACAGGTCAGAGGAATAGGAAGGAAGTTCCCATAGAAGGCCCGGATCTCCAGGAGTaGCATAATCAGAGGCCATCA | + |
Preference number: 4 (lower is better) Translates to: LIPTPTGQRNRKEVPIEGPDLQE*HNQRPS Trigger: TGATGGCCTCTGATTATGTCACTCCTGGAGATCCGG...GCCTTCTATGGGAACTTCCTTCCTATTCCTCTGACCTGTTGGAGTGGGGATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | CACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAGTTCTTGGGAAGTGGTaGCTGCACATTCTGGGCAAG | + |
Preference number: 4 (lower is better) Translates to: HVWPTRGHVGRAIQSHPKVLGKW*LHILGK Trigger: CTTGCCCAGAATGTGCAGCCACCACTTCCCAAGAAC...TTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGAGCGGGTGTAGACACTaGCCCCCGGCGGCTCCTTCA | + |
Preference number: 4 (lower is better) Translates to: ELCREIMCSRKLQVSHSRSGCRH*PPAAPS Trigger: TGAAGGAGCCGCCGGGGGCCAGTGTCTACACCCGCT...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | ACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTTTGCTGCTCTGTGGCCCCTaGAGAGCGGGGTTCTTAGTG | + |
Preference number: 4 (lower is better) Translates to: TDGCEPPCSCWELNSEPLLLCGP*RAGFLV Trigger: CACTAAGAACCCCGCTCTCCAGGGGCCACAGAGCAG...CAAAGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR TCA 90 bp | ACAATGTCCATTGACTCCAGGTCCATAGAACACATCAAGACTGAACTCTGTAGAGGCTGGGAGTCCCAGTaGACCTCTGGGCTCCATCTG | + |
Preference number: 4 (lower is better) Translates to: TMSIDSRSIEHIKTELCRGWESQ*TSGLHL Trigger: CAGATGGAGCCCAGAGGTTCACTGGGACTCCCAGCC...TCTACAGAGTTCAGTCTTGATGTGTTCTATGGACCTGGAGTCAATGGACATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | CACTTACAGCAAAGACCCCTGCAAACAGGGACCCAAAGACAGGTGTGGCTCGGCGATAGGGAAACTTTTTaGCAGACAAGTCCTGGACTA | + |
Preference number: 4 (lower is better) Translates to: HLQQRPLQTGTQRQVWLGDRETF*QTSPGL Trigger: TAGTCCAGGACTTGTCTGTCAAAAAGTTTCCCTATC...GCCGAGCCACACCTGTCTTTGGGTCCCTGTTTGCAGGGGTCTTTGCTGTAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | GCACAGGTATCCAGGCTTTGCTCTGGAGGGAGAACTAACGAACAGCTCAGCTGTGATGCTTTAGGGACTTaGAAAACTGAATGGCTGGCG | + |
Preference number: 4 (lower is better) Translates to: AQVSRLCSGGRTNEQLSCDALGT*KTEWLA Trigger: CGCCAGCCATTCAGTTTTTCAAGTCCCTAAAGCATC...ACAGCTGAGCTGTTCGTTAGTTCTCCCTCCAGAGCAAAGCCTGGATACCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | TGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTTTGGAAGAGCAGAAAGGCCACGGTCCATaGTCTTCTCCTCTTGGTCCC | + |
Preference number: 4 (lower is better) Translates to: CEPPCSCWELNSEPLEEQKGHGP*SSPLGP Trigger: GGGACCAAGAGGAGAAGATCATGGACCGTGGCCTTT...CTGCTCTTCCAAAGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR GCA 90 bp | ACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAACAGGCACAGGTAGACTaGAATGGTAGCGGGTGTAGA | + |
Preference number: 4 (lower is better) Translates to: TCGPQEAMWEELFSLIQKQAQVD*NGSGCR Trigger: TCTACACCCGCTACCATTGCAGTCTACCTGTGCCTG...TTTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | ACTCCAAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATATGGCGAAGGCTGCCATaGTGCCAGGAGGCCAGAGAC | + |
Preference number: 4 (lower is better) Translates to: TPSLSLKALDTEGTRKNIWRRLP*CQEARD Trigger: GTCTCTGGCCTCCTGGCAGCATGGCAGCCTTCGCCA...TATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTTGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | TGCAAGGCACTTTGGCATTCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCGGTGGCTGCACATTCTaGGCAAGTGGCACCATGAGC | + |
Preference number: 4 (lower is better) Translates to: CKALWHSHLNMEATPVCFGGCTF*ASGTMS Trigger: GCTCATGGTGCCACTTGCCCAGAATGTGCAGCCACC...GAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGAATGCCAAAGTGCCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | ACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTTTGGGTGGCTGCACATTCTaGGCAAGTGGCACCATGAGC | + |
Preference number: 4 (lower is better) Translates to: TDGCEPPCSCWELNSEPLGGCTF*ASGTMS Trigger: GCTCATGGTGCCACTTGCCCAGAATGTGCAGCCACC...CAAAGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CCA 90 bp | TCACTTTGTAGACCAGGCTGGACTCAAACTCAGAAATCTGCCTGCCTCTGCCTCGAGCAGTGGAGGGACTaGATCCCATCAAAGAAGCAT | + |
Preference number: 4 (lower is better) Translates to: SLCRPGWTQTQKSACLCLEQWRD*IPSKKH Trigger: ATGCTTCTTTGATGGGATCCAGTCCCTCCACTGCTC...GAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGTCCAGCCTGGTCTACAAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | ACTACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTCCGCCCAGCTGCAGATaGTGTGGTTGGTGTAGTCAT | + |
Preference number: 4 (lower is better) Translates to: TTDGCEPPCSCWELNSEPPPSCR*CGWCSH Trigger: ATGACTACACCAACCACATCATCTGCAGCTGGGCGG...AGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR TCA 90 bp | CTCAGAAATCTGCCTGCCTCTGCCTCCAGAGTGCTGGGATTAAGGGAATGCGCCAGTAGTCTTCGTTTGTaGTGGAAAATCGTGTATAGG | + |
Preference number: 4 (lower is better) Translates to: LRNLPASASRVLGLRECASSLRL*WKIVYR Trigger: CCTATACACGATTTTCCATCACAAACGAAGACTACT...GGCGCATTCCCTTAATCCCAGCACTCTGGAGGCAGAGGCAGGCAGATTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | GAGACACACACAAAGGCCATGTGCAAACGTGACCATGAACAAACAACTCCAGTGCCATCAAAGAAGCATTaGAGGTTCTGTGGCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: ETHTKAMCKRDHEQTTPVPSKKH*RFCGWA Trigger: GGCCCAGCCACAGAACCTTCAATGCTTCTTTGATGG...CACTGGAGTTGTTTGTTCATGGTCACGTTTGCACATGGCCTTTGTGTGTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | AAGAGAAAAGCACAGGTGGGGTATTGCCATGTCAGGGCTGGGAGCAAGGAGGAGGGAATGTGTGCTCAATaGATGAGTAAGCCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: KRKAQVGYCHVRAGSKEEGMCAQ*MSKPSS Trigger: AGAAGATGGCTTACTCATTCATTGAGCACACATTCC...CTCCTCCTTGCTCCCAGCCCTGACATGGCAATACCCCACCTGTGCTTTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGTGGCTTACTGTGTGGTaGGAGGGAGCCAGGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: ELCREIMCSRKLQVSHSRWLTVW*EGARSQ Trigger: CTGGGACCTGGCTCCCTCTCACCACACAGTAAGCCA...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | ACTCCAAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATATGGCTTACTGTGTGGTaGGAGGGAGCCAGGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: TPSLSLKALDTEGTRKNIWLTVW*EGARSQ Trigger: CTGGGACCTGGCTCCCTCTCACCACACAGTAAGCCA...TATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTTGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | CTCATCCCCACTCCAACAGGTCAGAGGAATAGGAAGGAAGTTCCCATAGAAGGCGATGCTTTAGGGACTTaGAAAACTGAATGGCTGGCG | + |
Preference number: 4 (lower is better) Translates to: LIPTPTGQRNRKEVPIEGDALGT*KTEWLA Trigger: CGCCAGCCATTCAGTTTTTCAAGTCCCTAAAGCATC...GCCTTCTATGGGAACTTCCTTCCTATTCCTCTGACCTGTTGGAGTGGGGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | ACTACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTCTAGGTTCTCTGTCTTaGTGTCCTCCCAGCTGTCCG | + |
Preference number: 4 (lower is better) Translates to: TTDGCEPPCSCWELNSEPLGSLS*CPPSCP Trigger: CGGACAGCTGGGAGGACAGCAAGACAGAGAACCTAG...AGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CCA 90 bp | TGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTTTGGAAGAGCAGGTTCTTGGGAAGTGGTaGCTGCACATTCTGGGCAAG | + |
Preference number: 4 (lower is better) Translates to: CEPPCSCWELNSEPLEEQVLGKW*LHILGK Trigger: CTTGCCCAGAATGTGCAGCCACCACTTCCCAAGAAC...CTGCTCTTCCAAAGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CCA 90 bp | TCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCTCTAGAGTGGTCACTTTGGTGTCTGGCTCCAGCTaGGAGAGGTCCATGCTATGG | + |
Preference number: 4 (lower is better) Translates to: SHLNMEATPVCFSRVVTLVSGSS*ERSMLW Trigger: CCATAGCATGGACCTCTCCCAGCTGGAGCCAGACAC...CAAAGTGACCACTCTAGAGAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | ACAATGTCCATTGACTCCAGGTCCATAGAACACATCAAGACTGAACTCTGTAGAAGATCAGGCAGAGAGTaGGATTGGGGAGGCCCCAGG | + |
Preference number: 4 (lower is better) Translates to: TMSIDSRSIEHIKTELCRRSGRE*DWGGPR Trigger: CCTGGGGCCTCCCCAATCCCACTCTCTGCCTGATCT...TCTACAGAGTTCAGTCTTGATGTGTTCTATGGACCTGGAGTCAATGGACATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | ACTACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTGATAGAGGGTCATGTTaGTTAGCCCCTGGGCATCCT | + |
Preference number: 4 (lower is better) Translates to: TTDGCEPPCSCWELNSEPDRGSC*LAPGHP Trigger: AGGATGCCCAGGGGCTAATCAACATGACCCTCTATC...AGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR TCA 90 bp | GCCCAAGCATCCATGGGCAGAAAGGGTAGAGTCCCAGATCATGTCTCCACCCATAGTAGTCTTCGTTTGTaGTGGAAAATCGTGTATAGG | + |
Preference number: 4 (lower is better) Translates to: AQASMGRKGRVPDHVSTHSSLRL*WKIVYR Trigger: CCTATACACGATTTTCCATCACAAACGAAGACTACT...ATGGGTGGAGACATGATCTGGGACTCTACCCTTTCTGCCCATGGATGCTTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR TCA 90 bp | ACTCAAGATGTTAGTGGTTTTCTTTGCTGCAATGAACAGAGACCAAGGGACATTGGGCAAGTGGCACCATaGGCTGGATGCCCAGATCAC | + |
Preference number: 4 (lower is better) Translates to: TQDVSGFLCCNEQRPRDIGQVAP*AGCPDH Trigger: GTGATCTGGGCATCCAGCTCATGGTGCCACTTGCCC...AATGTCCCTTGGTCTCTGTTCATTGCAGCAAAGAAAACCACTAACATCTTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | ACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTTTGCCATCAAAGAAGCATTaGAGGTTCTGTGGCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: TDGCEPPCSCWELNSEPLPSKKH*RFCGWA Trigger: GGCCCAGCCACAGAACCTTCAATGCTTCTTTGATGG...CAAAGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR GCA 90 bp | ACTACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTCAGGCACAGGTAGACTaGAATGGTAGCGGGTGTAGA | + |
Preference number: 4 (lower is better) Translates to: TTDGCEPPCSCWELNSEPQAQVD*NGSGCR Trigger: TCTACACCCGCTACCATTGCAGTCTACCTGTGCCTG...AGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CCA 90 bp | GAGACACACACAAAGGCCATGTGCAAACGTGACCATGAACAAACAACTCCAGTGGAGCAGTGGAGGGACTaGATCCCATCAAAGAAGCAT | + |
Preference number: 4 (lower is better) Translates to: ETHTKAMCKRDHEQTTPVEQWRD*IPSKKH Trigger: ATGCTTCTTTGATGGGATCCAGTCCCTCCACTGCTC...CACTGGAGTTGTTTGTTCATGGTCACGTTTGCACATGGCCTTTGTGTGTGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGCACACCTTCCCAGACTaGCTATTGTCCCAAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: ELCREIMCSRKLQVSHSRHTFPD*LLSQGG Trigger: GCCCCCTTGGGACAATAGCCAGTCTGGGAAGGTGTG...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR CAA 72 bp | GTATCTGGGTGTGCTGTCCAGGATCCACAACTAAGCTaGTCTGCAGTTGAGACCATGAGTTCTAGACACACA | + |
Preference number: 4 (lower is better) Translates to: VSGCAVQDPQLS*SAVETMSSRHT Trigger: TGTGTGTCTAGAACTCATGGTCTCAACTGCAGACAAGCTTAGTTGTGGATCCTGGACAGCACACCCAGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | AATTATTTTATTTATGAGTACACTGTTGCTGTCTCCAAACACACCAGAAGAGGGGGCTGGGAGTCCCAGTaGACCTCTGGGCTCCATCTG | + |
Preference number: 4 (lower is better) Translates to: NYFIYEYTVAVSKHTRRGGWESQ*TSGLHL Trigger: CAGATGGAGCCCAGAGGTTCACTGGGACTCCCAGCC...CCCTCTTCTGGTGTGTTTGGAGACAGCAACAGTGTACTCATAAATAAAATAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CCA 90 bp | AAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATAAACAAAGATCAGGCAGAGAGTaGGATTGGGGAGGCCCCAGG | + |
Preference number: 4 (lower is better) Translates to: KSLTQGFRHRRNQKEHKQRSGRE*DWGGPR Trigger: CCTGGGGCCTCCCCAATCCCACTCTCTGCCTGATCT...TTGTTTATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | TCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTAGAAAAGGGGACTTGGCAGCCTaGCTCACACTTGGAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: SIEHIKTELCREIMCSRKGDLAA*LTLGGS Trigger: GCTGCCTCCAAGTGTGAGCCAGGCTGCCAAGTCCCC...TTTTCTAGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | ACTCCAAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATACTGGCGCCTGGGGCATaGGCTGATAGGGAAACTTTT | + |
Preference number: 4 (lower is better) Translates to: TPSLSLKALDTEGTRKNILAPGA*ADRETF Trigger: AAAAGTTTCCCTATCAGCCCATGCCCCAGGCGCCAG...TATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTTGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGCTGGCGCCTGGGGCATaGGCTGATAGGGAAACTTTT | + |
Preference number: 4 (lower is better) Translates to: ELCREIMCSRKLQVSHSRLAPGA*ADRETF Trigger: AAAAGTTTCCCTATCAGCCCATGCCCCAGGCGCCAG...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | AATTATTTTATTTATGAGTACACTGTTGCTGTCTCCAAACACACCAGAAGAGGGGGGCAAGTGGCACCATaGGCTGGATGCCCAGATCAC | + |
Preference number: 4 (lower is better) Translates to: NYFIYEYTVAVSKHTRRGGQVAP*AGCPDH Trigger: GTGATCTGGGCATCCAGCTCATGGTGCCACTTGCCC...CCCTCTTCTGGTGTGTTTGGAGACAGCAACAGTGTACTCATAAATAAAATAATT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR GCA 90 bp | ACTCAAGATGTTAGTGGTTTTCTTTGCTGCAATGAACAGAGACCAAGGGACATTCTAGGTTCTCTGTCTTaGTGTCCTCCCAGCTGTCCG | + |
Preference number: 4 (lower is better) Translates to: TQDVSGFLCCNEQRPRDILGSLS*CPPSCP Trigger: CGGACAGCTGGGAGGACAGCAAGACAGAGAACCTAG...AATGTCCCTTGGTCTCTGTTCATTGCAGCAAAGAAAACCACTAACATCTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | ACAATGTCCATTGACTCCAGGTCCATAGAACACATCAAGACTGAACTCTGTAGATATGACTCCCCCTGTTaGTCAGCAAGAAGCCTGCTC | + |
Preference number: 4 (lower is better) Translates to: TMSIDSRSIEHIKTELCRYDSPC*SARSLL Trigger: GAGCAGGCTTCTTGCTGAGCAACAGGGGGAGTCATA...TCTACAGAGTTCAGTCTTGATGTGTTCTATGGACCTGGAGTCAATGGACATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | TCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTAGAAAAACAGGAGGAGCAGGATaGCCTGGAGGGGACTTGGCA | + |
Preference number: 4 (lower is better) Translates to: SIEHIKTELCREIMCSRKTGGAG*PGGDLA Trigger: TGCCAAGTCCCCTCCAGGCCATCCTGCTCCTCCTGT...TTTTCTAGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | TGCAAGGCACTTTGGCATTCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCTTGACAGACAAGTCCTaGACTAGGTCCTCAGTCTCA | + |
Preference number: 4 (lower is better) Translates to: CKALWHSHLNMEATPVCFLTDKS*TRSSVS Trigger: TGAGACTGAGGACCTAGTCCAGGACTTGTCTGTCAA...GAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGAATGCCAAAGTGCCTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | AAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATAAACAACCGCCCAGCTGCAGATaGTGTGGTTGGTGTAGTCAT | + |
Preference number: 4 (lower is better) Translates to: KSLTQGFRHRRNQKEHKQPPSCR*CGWCSH Trigger: ATGACTACACCAACCACATCATCTGCAGCTGGGCGG...TTGTTTATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | ACTCAAGATGTTAGTGGTTTTCTTTGCTGCAATGAACAGAGACCAAGGGACATTTGTTCTTGGTCAGGTTaGGGGTTGGAGGCTCCATCT | + |
Preference number: 4 (lower is better) Translates to: TQDVSGFLCCNEQRPRDICSWSG*GLEAPS Trigger: AGATGGAGCCTCCAACCCTCAACCTGACCAAGAACA...AATGTCCCTTGGTCTCTGTTCATTGCAGCAAAGAAAACCACTAACATCTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | ACAATGTCCATTGACTCCAGGTCCATAGAACACATCAAGACTGAACTCTGTAGACCAGGTAGGGCCCATTaGAGTCAAAGCTGGGTAATT | + |
Preference number: 4 (lower is better) Translates to: TMSIDSRSIEHIKTELCRPGRAH*SQSWVI Trigger: AATTACCCAGCTTTGACTTCAATGGGCCCTACCTGG...TCTACAGAGTTCAGTCTTGATGTGTTCTATGGACCTGGAGTCAATGGACATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | ACTCAAGATGTTAGTGGTTTTCTTTGCTGCAATGAACAGAGACCAAGGGACATTCCGGATCTCCAGGAGTaGCATAATCAGAGGCCATCA | + |
Preference number: 4 (lower is better) Translates to: TQDVSGFLCCNEQRPRDIPDLQE*HNQRPS Trigger: TGATGGCCTCTGATTATGTCACTCCTGGAGATCCGG...AATGTCCCTTGGTCTCTGTTCATTGCAGCAAAGAAAACCACTAACATCTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | AATTATTTTATTTATGAGTACACTGTTGCTGTCTCCAAACACACCAGAAGAGGGAGGGACCGTTTCTTCTaGCTCTGTCACCCCGTGTCC | + |
Preference number: 4 (lower is better) Translates to: NYFIYEYTVAVSKHTRRGRDRFF*LCHPVS Trigger: GGACACGGGGTGACAGAGGCAGAAGAAACGGTCCCT...CCCTCTTCTGGTGTGTTTGGAGACAGCAACAGTGTACTCATAAATAAAATAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR GCA 90 bp | AAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATAAACAACCTCCTGTTCCTCCATaGTCAGCTCAACTGGAGGGT | + |
Preference number: 4 (lower is better) Translates to: KSLTQGFRHRRNQKEHKQPPVPP*SAQLEG Trigger: ACCCTCCAGTTGAGCTGAGCATGGAGGAACAGGAGG...TTGTTTATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | TCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTAGAAAAGTGTCTGGCTCCAGCTaGGAGAGGTCCATGCTATGG | + |
Preference number: 4 (lower is better) Translates to: SIEHIKTELCREIMCSRKVSGSS*ERSMLW Trigger: CCATAGCATGGACCTCTCCCAGCTGGAGCCAGACAC...TTTTCTAGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | TCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTAGAAAAGGAACCCAGCTGGTCTaGGAGATCAGGCAGAGAGTG | + |
Preference number: 4 (lower is better) Translates to: SIEHIKTELCREIMCSRKGTQLV*EIRQRV Trigger: CACTCTCTGCCTGATCTCCCAGACCAGCTGGGTTCC...TTTTCTAGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | TCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTAGAAAAGGCCCCCAGAGCTTATaGGCAGAGTCACTGGGTTGT | + |
Preference number: 4 (lower is better) Translates to: SIEHIKTELCREIMCSRKGPQSL*AESLGC Trigger: ACAACCCAGTGACTCTGCCCATAAGCTCTGGGGGCC...TTTTCTAGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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3UTR CAA 72 bp | GAGGCCACTCCTGTTTGTTTCTCTAGAGTGGTCACTTaGGAAAGTATTGACAGGCTGATGTTGAACATTGCC | + |
Preference number: 4 (lower is better) Translates to: EATPVCFSRVVT*ESIDRLMLNIA Trigger: GGCAATGTTCAACATCAGCCTGTCAATACTTTCCAAAGTGACCACTCTAGAGAAACAAACAGGAGTGGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | GAGACACACACAAAGGCCATGTGCAAACGTGACCATGAACAAACAACTCCAGTGAGTAGTCTTCGTTTGTaGTGGAAAATCGTGTATAGG | + |
Preference number: 4 (lower is better) Translates to: ETHTKAMCKRDHEQTTPVSSLRL*WKIVYR Trigger: CCTATACACGATTTTCCATCACAAACGAAGACTACT...CACTGGAGTTGTTTGTTCATGGTCACGTTTGCACATGGCCTTTGTGTGTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | TGCAAGGCACTTTGGCATTCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCGGAATGTGTGCTCAATaGATGAGTAAGCCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: CKALWHSHLNMEATPVCFGMCAQ*MSKPSS Trigger: AGAAGATGGCTTACTCATTCATTGAGCACACATTCC...GAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGAATGCCAAAGTGCCTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | ACAGATGGTTGTGAACCACCATGTAGTTGCTGGGAGTTGAACTCAGAACCTTTGGGAATGTGTGCTCAATaGATGAGTAAGCCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: TDGCEPPCSCWELNSEPLGMCAQ*MSKPSS Trigger: AGAAGATGGCTTACTCATTCATTGAGCACACATTCC...CAAAGGTTCTGAGTTCAACTCCCAGCAACTACATGGTGGTTCACAACCATCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR TCA 90 bp | ACTCAAGATGTTAGTGGTTTTCTTTGCTGCAATGAACAGAGACCAAGGGACATTCCAGGTAGGGCCCATTaGAGTCAAAGCTGGGTAATT | + |
Preference number: 4 (lower is better) Translates to: TQDVSGFLCCNEQRPRDIPGRAH*SQSWVI Trigger: AATTACCCAGCTTTGACTTCAATGGGCCCTACCTGG...AATGTCCCTTGGTCTCTGTTCATTGCAGCAAAGAAAACCACTAACATCTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR GCA 90 bp | AATTATTTTATTTATGAGTACACTGTTGCTGTCTCCAAACACACCAGAAGAGGGCTCTTGGTCCCCTGTTaGTCAGCAAGAAGCCTGCTC | + |
Preference number: 4 (lower is better) Translates to: NYFIYEYTVAVSKHTRRGLLVPC*SARSLL Trigger: GAGCAGGCTTCTTGCTGAGCAACAGGGGACCAAGAG...CCCTCTTCTGGTGTGTTTGGAGACAGCAACAGTGTACTCATAAATAAAATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CCA 90 bp | AAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATAAACAACATGCTCAGCTCAACTaGAGGGTTCTCCTTTGGCTC | + |
Preference number: 4 (lower is better) Translates to: KSLTQGFRHRRNQKEHKQHAQLN*RVLLWL Trigger: GAGCCAAAGGAGAACCCTCCAGTTGAGCTGAGCATG...TTGTTTATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR TCA 90 bp | ACTCCAAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATACTCTATAGTGAGAGGTaGCACGTTGTTGTCTTCCAA | + |
Preference number: 4 (lower is better) Translates to: TPSLSLKALDTEGTRKNILYSER*HVVVFQ Trigger: TTGGAAGACAACAACGTGTCACCTCTCACTATAGAG...TATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTTGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CCA 90 bp | AATTATTTTATTTATGAGTACACTGTTGCTGTCTCCAAACACACCAGAAGAGGGGAGCAGTGGAGGGACTaGATCCCATCAAAGAAGCAT | + |
Preference number: 4 (lower is better) Translates to: NYFIYEYTVAVSKHTRRGEQWRD*IPSKKH Trigger: ATGCTTCTTTGATGGGATCCAGTCCCTCCACTGCTC...CCCTCTTCTGGTGTGTTTGGAGACAGCAACAGTGTACTCATAAATAAAATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS CCA 90 bp | TTCGGGATGTGGGGATGCTGGGCCCACTTCCTCCCTGGGCTCTCCTaGGATCACTGTGGGGCTGCTTGCCACAGGAGGAGCAGGATGGCC | + |
Preference number: 5 (lower is better) Translates to: FGMWGCWAHFLPGLS*DHCGAACHRRSRMA Trigger: GGCCATCCTGCTCCTCCTGTGGCAAGCAGCCCCACAGTGATCCCAGGAGAGCCCAGGGAGGAAGTGGGCCCAGCATCCCCACATCCCGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS GCA 90 bp | CCTTGTCCCCTGGCTGGGAGTCCCAGTGAACCTCTGGGCTCCATCTaGTGGGTCTCCCAGACAAGCTTGAACCCGGGGACAGCCGAGTGC | + |
Preference number: 5 (lower is better) Translates to: PCPLAGSPSEPLGSI*WVSQTSLNPGTAEC Trigger: GCACTCGGCTGTCCCCGGGTTCAAGCTTGTCTGGGAGACCCAGCAGATGGAGCCCAGAGGTTCACTGGGACTCCCAGCCAGGGGACAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 90 bp | TGGGATCACTGTGGGGCTGCTTGCCACAGGAGGAGCAGGATGGCCTaGAGGGGACTTGGCAGCCTGGCTCACACTTGGAGGCAGCTCCAC | + |
Preference number: 5 (lower is better) Translates to: WDHCGAACHRRSRMA*RGLGSLAHTWRQLH Trigger: GTGGAGCTGCCTCCAAGTGTGAGCCAGGCTGCCAAGTCCCCTCCAGGCCATCCTGCTCCTCCTGTGGCAAGCAGCCCCACAGTGATCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS GCA 90 bp | GGCTCCACAGAAGGGCTCCCTGAGGTCTCCAGGCTGGACCCACACTaGACATCCATAGCCTGGCCCTGCCCCATCACCTGGGACAATGGA | + |
Preference number: 5 (lower is better) Translates to: GSTEGLPEVSRLDPH*TSIAWPCPITWDNG Trigger: TCCATTGTCCCAGGTGATGGGGCAGGGCCAGGCTATGGATGTGCAGTGTGGGTCCAGCCTGGAGACCTCAGGGAGCCCTTCTGTGGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CCA 90 bp | TACTCCAAGGAGCCTGGCAGTGCTGGCTTCAGGCTCCCACCCACCTaGGGGGAACCCAGCTGGTCTGGGAGATCAGGCAGAGAGTGGGAT | + |
Preference number: 5 (lower is better) Translates to: YSKEPGSAGFRLPPT*GEPSWSGRSGREWD Trigger: ATCCCACTCTCTGCCTGATCTCCCAGACCAGCTGGGTTCCCCCCAGGTGGGTGGGAGCCTGAAGCCAGCACTGCCAGGCTCCTTGGAGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS TCA 90 bp | CCAGTGAACCTCTGGGCTCCATCTGCTGGGTCTCCCAGACAAGCTTaGACCCGGGGACAGCCGAGTGCGCACACGGGCAGCATAGATGCT | + |
Preference number: 5 (lower is better) Translates to: PVNLWAPSAGSPRQA*TRGQPSAHTGSIDA Trigger: AGCATCTATGCTGCCCGTGTGCGCACTCGGCTGTCCCCGGGTTCAAGCTTGTCTGGGAGACCCAGCAGATGGAGCCCAGAGGTTCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS GCA 90 bp | CCTGCTCTGTGGCCCCTGGAGAGCGGGGTTCTTAGTGGCGAAGGCTaGCATGCTGCCAGGAGGCCAGAGACCTTTACCTCCATCCTGGAA | + |
Preference number: 5 (lower is better) Translates to: PALWPLESGVLSGEG*HAARRPETFTSILE Trigger: TTCCAGGATGGAGGTAAAGGTCTCTGGCCTCCTGGCAGCATGGCAGCCTTCGCCACTAAGAACCCCGCTCTCCAGGGGCCACAGAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS GCA 90 bp | AGACTGTGTACTGGCTGTGTGCACTGGGCTCAGGCACAGGTAGACTaGAATGGTAGCGGGTGTAGACACTGGCCCCCGGCGGCTCCTTCA | + |
Preference number: 5 (lower is better) Translates to: RLCTGCVHWAQAQVD*NGSGCRHWPPAAPS Trigger: TGAAGGAGCCGCCGGGGGCCAGTGTCTACACCCGCTACCATTGCAGTCTACCTGTGCCTGAGCCCAGTGCACACAGCCAGTACACAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS TCA 90 bp | CCCATCGTAGTTAGAGATGGGCTTGACCCTCACCCTGGCGCAGTATaGGGTGTCTGGCTCCAGCTGGGAGAGGTCCATGCTATGGGCTCG | + |
Preference number: 5 (lower is better) Translates to: PIVVRDGLDPHPGAV*GVWLQLGEVHAMGS Trigger: CGAGCCCATAGCATGGACCTCTCCCAGCTGGAGCCAGACACCTCATACTGCGCCAGGGTGAGGGTCAAGCCCATCTCTAACTACGATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS GCA 90 bp | CCCTGGCGCAGTATGAGGTGTCTGGCTCCAGCTGGGAGAGGTCCATaGTATGGGCTCGATCTAGGTTCTCTGTCTTGCTGTCCTCCCAGC | + |
Preference number: 5 (lower is better) Translates to: PWRSMRCLAPAGRGP*YGLDLGSLSCCPPS Trigger: GCTGGGAGGACAGCAAGACAGAGAACCTAGATCGAGCCCATAGCATGGACCTCTCCCAGCTGGAGCCAGACACCTCATACTGCGCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 90 bp | GCGCAGTATGAGGTGTCTGGCTCCAGCTGGGAGAGGTCCATGCTATaGGCTCGATCTAGGTTCTCTGTCTTGCTGTCCTCCCAGCTGTCC | + |
Preference number: 5 (lower is better) Translates to: AQYEVSGSSWERSML*ARSRFSVLLSSQLS Trigger: GGACAGCTGGGAGGACAGCAAGACAGAGAACCTAGATCGAGCCCATAGCATGGACCTCTCCCAGCTGGAGCCAGACACCTCATACTGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 90 bp | GGCTTGACCCTCACCCTGGCGCAGTATGAGGTGTCTGGCTCCAGCTaGGAGAGGTCCATGCTATGGGCTCGATCTAGGTTCTCTGTCTTG | + |
Preference number: 5 (lower is better) Translates to: GLTLTLAQYEVSGSS*ERSMLWARSRFSVL Trigger: CAAGACAGAGAACCTAGATCGAGCCCATAGCATGGACCTCTCCCAGCTGGAGCCAGACACCTCATACTGCGCCAGGGTGAGGGTCAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 90 bp | ACACTGCACATCCATAGCCTGGCCCTGCCCCATCACCTGGGACAATaGAACCAGTTGCGCTTGACCTCCAGGGGGCAGACACATGTACTC | + |
Preference number: 5 (lower is better) Translates to: TLHIHSLALPHHLGQ*NQLRLTSRGQTHVL Trigger: GAGTACATGTGTCTGCCCCCTGGAGGTCAAGCGCAACTGGTTCCATTGTCCCAGGTGATGGGGCAGGGCCAGGCTATGGATGTGCAGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CCA 90 bp | CATAATCAGAGGCCATCATACTGCCCTCAGGGCCCCCAGAGCTTATaGGCAGAGTCACTGGGTTGTCCCGTGCCTCCTGTTCCTCCATGC | + |
Preference number: 5 (lower is better) Translates to: HNQRPSYCPQGPQSL*AESLGCPVPPVPPC Trigger: GCATGGAGGAACAGGAGGCACGGGACAACCCAGTGACTCTGCCCATAAGCTCTGGGGGCCCTGAGGGCAGTATGATGGCCTCTGATTATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | CACAGCAGACCCTCATCTGAGGCCGGTGGGAGCACAGGTATCCAGGCTTTGCTCCTGATGCTGACGTTCTaGGGAAGTGGTGGCTGCACA | + |
Preference number: 5 (lower is better) Translates to: HSRPSSEAGGSTGIQALLLMLTF*GSGGCT Trigger: TGTGCAGCCACCACTTCCCAAGAACGTCAGCATCAG...GAGCAAAGCCTGGATACCTGTGCTCCCACCGGCCTCAGATGAGGGTCTGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS GCA 90 bp | TTATGGGCAGAGTCACTGGGTTGTCCCGTGCCTCCTGTTCCTCCATaGTCAGCTCAACTGGAGGGTTCTCCTTTGGCTCCACAGAAGGGC | + |
Preference number: 5 (lower is better) Translates to: LWAESLGCPVPPVPP*SAQLEGSPLAPQKG Trigger: GCCCTTCTGTGGAGCCAAAGGAGAACCCTCCAGTTGAGCTGAGCATGGAGGAACAGGAGGCACGGGACAACCCAGTGACTCTGCCCATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | GCACAGGTATCCAGGCTTTGCTCTGGAGGGAGAACTAACGAACAGCTCAGCTGTATGAGGCAGCTGGGGTaGTATCAGGCCCGGATGGTG | + |
Preference number: 5 (lower is better) Translates to: AQVSRLCSGGRTNEQLSCMRQLG*YQARMV Trigger: CACCATCCGGGCCTGATACAACCCCAGCTGCCTCAT...ACAGCTGAGCTGTTCGTTAGTTCTCCCTCCAGAGCAAAGCCTGGATACCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | GCCCAAGCATCCATGGGCAGAAAGGGTAGAGTCCCAGATCATGTCTCCACCCATTCTAGGTTCTCTGTCTaGCTGTCCTCCCAGCTGTCC | + |
Preference number: 5 (lower is better) Translates to: AQASMGRKGRVPDHVSTHSRFSV*LSSQLS Trigger: GGACAGCTGGGAGGACAGCAAGACAGAGAACCTAGA...ATGGGTGGAGACATGATCTGGGACTCTACCCTTTCTGCCCATGGATGCTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CAA 90 bp | ACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAATGGCCTGGAGGGGACTaGGCAGCCTGGCTCACACTT | + |
Preference number: 5 (lower is better) Translates to: TCGPQEAMWEELFSLIQKWPGGD*AAWLTL Trigger: AAGTGTGAGCCAGGCTGCCAAGTCCCCTCCAGGCCA...TTTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | GCACAGGTATCCAGGCTTTGCTCTGGAGGGAGAACTAACGAACAGCTCAGCTGTCTGATGCTGACGTTCTaGGGAAGTGGTGGCTGCACA | + |
Preference number: 5 (lower is better) Translates to: AQVSRLCSGGRTNEQLSCLMLTF*GSGGCT Trigger: TGTGCAGCCACCACTTCCCAAGAACGTCAGCATCAG...ACAGCTGAGCTGTTCGTTAGTTCTCCCTCCAGAGCAAAGCCTGGATACCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | ACGTGTGGCCCACAAGAGGCCATGTGGGAAGAGCTATTCAGTCTCATCCAAAAATGGAACCAGTTGCGCTaGACCTCCAGGGGGCAGACA | + |
Preference number: 5 (lower is better) Translates to: TCGPQEAMWEELFSLIQKWNQLR*TSRGQT Trigger: TGTCTGCCCCCTGGAGGTCAAGCGCAACTGGTTCCA...TTTTTGGATGAGACTGAATAGCTCTTCCCACATGGCCTCTTGTGGGCCACACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS TCA 90 bp | ACTGAATGGCTGGCGCCTGGGGCATGGGCTGATAGGGAAACTTTTTaGCAGACAAGTCCTGGACTAGGTCCTCAGTCTCAGAACACAGAC | + |
Preference number: 5 (lower is better) Translates to: TEWLAPGAWADRETF*QTSPGLGPQSQNTD Trigger: GTCTGTGTTCTGAGACTGAGGACCTAGTCCAGGACTTGTCTGTCAAAAAGTTTCCCTATCAGCCCATGCCCCAGGCGCCAGCCATTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | TGCAAGGCACTTTGGCATTCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCCTGGAGGGTTCTCCTTaGGCTCCACAGAAGGGCTCC | + |
Preference number: 5 (lower is better) Translates to: CKALWHSHLNMEATPVCFLEGSP*APQKGS Trigger: GGAGCCCTTCTGTGGAGCCAAAGGAGAACCCTCCAG...GAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGAATGCCAAAGTGCCTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CCA 90 bp | AGAGACCTTTACCTCCATCCTGGAACAGGAGGCTCTTGCTGGGGTTaGGGATCTTTTCCTTCCACTTCCTGTACGTCCTGTATACAGAGA | + |
Preference number: 5 (lower is better) Translates to: RDLYLHPGTGGSCWG*GSFPSTSCTSCIQR Trigger: TCTCTGTATACAGGACGTACAGGAAGTGGAAGGAAAAGATCCCCAACCCCAGCAAGAGCCTCCTGTTCCAGGATGGAGGTAAAGGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | TCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCTCTAGAGTGGTCACTTTGTGGAACCAGTTGCGCTaGACCTCCAGGGGGCAGACA | + |
Preference number: 5 (lower is better) Translates to: SHLNMEATPVCFSRVVTLWNQLR*TSRGQT Trigger: TGTCTGCCCCCTGGAGGTCAAGCGCAACTGGTTCCA...CAAAGTGACCACTCTAGAGAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | TGCAAGGCACTTTGGCATTCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCCAGCCTGGCTCACACTaGGAGGCAGCTCCACATAGT | + |
Preference number: 5 (lower is better) Translates to: CKALWHSHLNMEATPVCFQPGSH*EAAPHS Trigger: ACTATGTGGAGCTGCCTCCAAGTGTGAGCCAGGCTG...GAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGAATGCCAAAGTGCCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | CTCATCCCCACTCCAACAGGTCAGAGGAATAGGAAGGAAGTTCCCATAGAAGGCGTGAGAGGTGACACGTaGTTGTCTTCCAAATGTGCA | + |
Preference number: 5 (lower is better) Translates to: LIPTPTGQRNRKEVPIEGVRGDT*LSSKCA Trigger: TGCACATTTGGAAGACAACAACGTGTCACCTCTCAC...GCCTTCTATGGGAACTTCCTTCCTATTCCTCTGACCTGTTGGAGTGGGGATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | ACTCAAGATGTTAGTGGTTTTCTTTGCTGCAATGAACAGAGACCAAGGGACATTTGGCCTGGAGGGGACTaGGCAGCCTGGCTCACACTT | + |
Preference number: 5 (lower is better) Translates to: TQDVSGFLCCNEQRPRDIWPGGD*AAWLTL Trigger: AAGTGTGAGCCAGGCTGCCAAGTCCCCTCCAGGCCA...AATGTCCCTTGGTCTCTGTTCATTGCAGCAAAGAAAACCACTAACATCTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | TCCAGGTCCATAGAACACATCAAGACTGAACTCTGTAGAGAGATCATGTGTTCTTCTAGGTTCTCTGTCTaGCTGTCCTCCCAGCTGTCC | + |
Preference number: 5 (lower is better) Translates to: SRSIEHIKTELCREIMCSSRFSV*LSSQLS Trigger: GGACAGCTGGGAGGACAGCAAGACAGAGAACCTAGA...AGAACACATGATCTCTCTACAGAGTTCAGTCTTGATGTGTTCTATGGACCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | TCACTTTGTAGACCAGGCTGGACTCAAACTCAGAAATCTGCCTGCCTCTGCCTCAGAGGTGACACGTTGTaGTCTTCCAAATGTGCATAT | + |
Preference number: 5 (lower is better) Translates to: SLCRPGWTQTQKSACLCLRGDTL*SSKCAY Trigger: ATATGCACATTTGGAAGACAACAACGTGTCACCTCT...GAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGTCCAGCCTGGTCTACAAAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | AAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATAAACAAATGAGGCAGCTGGGGTaGTATCAGGCCCGGATGGTG | + |
Preference number: 5 (lower is better) Translates to: KSLTQGFRHRRNQKEHKQMRQLG*YQARMV Trigger: CACCATCCGGGCCTGATACAACCCCAGCTGCCTCAT...TTGTTTATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | AAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATAAACAACTGGAGGGTTCTCCTTaGGCTCCACAGAAGGGCTCC | + |
Preference number: 5 (lower is better) Translates to: KSLTQGFRHRRNQKEHKQLEGSP*APQKGS Trigger: GGAGCCCTTCTGTGGAGCCAAAGGAGAACCCTCCAG...TTGTTTATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS TCA 90 bp | GTCCGATTTCTTCTTGTACTGGACCTGGAATGTGTGCTCAATGAATaGGTAAGCCATCTTCTGAGTTTCCCAATGCAGGCTGTAGCTGTC | + |
Preference number: 5 (lower is better) Translates to: VRFLLVLDLECVLNE*VSHLLSFPMQAVAV Trigger: GACAGCTACAGCCTGCATTGGGAAACTCAGAAGATGGCTTACTCATTCATTGAGCACACATTCCAGGTCCAGTACAAGAAGAAATCGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS TCA 90 bp | AGCTGTCCGATTTCTTCTTGTACTGGACCTGGAATGTGTGCTCAATaGATGAGTAAGCCATCTTCTGAGTTTCCCAATGCAGGCTGTAGC | + |
Preference number: 5 (lower is better) Translates to: SCPISSCTGPGMCAQ*MSKPSSEFPNAGCS Trigger: GCTACAGCCTGCATTGGGAAACTCAGAAGATGGCTTACTCATTCATTGAGCACACATTCCAGGTCCAGTACAAGAAGAAATCGGACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | AAGTCTCTCACTCAAGGCTTTAGACACAGAAGGAACCAGAAAGAACATAAACAACAGCCTGGCTCACACTaGGAGGCAGCTCCACATAGT | + |
Preference number: 5 (lower is better) Translates to: KSLTQGFRHRRNQKEHKQQPGSH*EAAPHS Trigger: ACTATGTGGAGCTGCCTCCAAGTGTGAGCCAGGCTG...TTGTTTATGTTCTTTCTGGTTCCTTCTGTGTCTAAAGCCTTGAGTGAGAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | TCACATCTTAACATGGAGGCCACTCCTGTTTGTTTCTCTAGAGTGGTCACTTTGGTGAGAGGTGACACGTaGTTGTCTTCCAAATGTGCA | + |
Preference number: 5 (lower is better) Translates to: SHLNMEATPVCFSRVVTLVRGDT*LSSKCA Trigger: TGCACATTTGGAAGACAACAACGTGTCACCTCTCAC...CAAAGTGACCACTCTAGAGAAACAAACAGGAGTGGCCTCCATGTTAAGATGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS-3UTR CAA 90 bp | AATTATTTTATTTATGAGTACACTGTTGCTGTCTCCAAACACACCAGAAGAGGGCTGATGCTGACGTTCTaGGGAAGTGGTGGCTGCACA | + |
Preference number: 5 (lower is better) Translates to: NYFIYEYTVAVSKHTRRGLMLTF*GSGGCT Trigger: TGTGCAGCCACCACTTCCCAAGAACGTCAGCATCAG...CCCTCTTCTGGTGTGTTTGGAGACAGCAACAGTGTACTCATAAATAAAATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS-3UTR CAA 90 bp | GAACTCTGTAGAGAGATCATGTGTTCTAGAAAACTCCAAGTCTCTCACTCAAGGAGAGGTGACACGTTGTaGTCTTCCAAATGTGCATAT | + |
Preference number: 5 (lower is better) Translates to: ELCREIMCSRKLQVSHSRRGDTL*SSKCAY Trigger: ATATGCACATTTGGAAGACAACAACGTGTCACCTCT...CCTTGAGTGAGAGACTTGGAGTTTTCTAGAACACATGATCTCTCTACAGAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS TCA 72 bp | CTCTGGGCTCCATCTGCTGGGTCTCCCAGACAAGCTTaGACCCGGGGACAGCCGAGTGCGCACACGGGCAGC | + |
Preference number: 6 (lower is better) Translates to: LWAPSAGSPRQA*TRGQPSAHTGS Trigger: GCTGCCCGTGTGCGCACTCGGCTGTCCCCGGGTTCAAGCTTGTCTGGGAGACCCAGCAGATGGAGCCCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | GAGCCTGGCAGTGCTGGCTTCAGGCTCCCACCCACCTaGGGGGAACCCAGCTGGTCTGGGAGATCAGGCAGA | + |
Preference number: 6 (lower is better) Translates to: EPGSAGFRLPPT*GEPSWSGRSGR Trigger: TCTGCCTGATCTCCCAGACCAGCTGGGTTCCCCCCAGGTGGGTGGGAGCCTGAAGCCAGCACTGCCAGGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS GCA 72 bp | ACTGGCTGTGTGCACTGGGCTCAGGCACAGGTAGACTaGAATGGTAGCGGGTGTAGACACTGGCCCCCGGCG | + |
Preference number: 6 (lower is better) Translates to: TGCVHWAQAQVD*NGSGCRHWPPA Trigger: CGCCGGGGGCCAGTGTCTACACCCGCTACCATTGCAGTCTACCTGTGCCTGAGCCCAGTGCACACAGCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS GCA 72 bp | TGGCCCCTGGAGAGCGGGGTTCTTAGTGGCGAAGGCTaGCATGCTGCCAGGAGGCCAGAGACCTTTACCTCC | + |
Preference number: 6 (lower is better) Translates to: WPLESGVLSGEG*HAARRPETFTS Trigger: GGAGGTAAAGGTCTCTGGCCTCCTGGCAGCATGGCAGCCTTCGCCACTAAGAACCCCGCTCTCCAGGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | GCCCTCAGGGCCCCCAGAGCTTATGGGCAGAGTCACTaGGTTGTCCCGTGCCTCCTGTTCCTCCATGCTCAG | + |
Preference number: 6 (lower is better) Translates to: ALRAPRAYGQSH*VVPCLLFLHAQ Trigger: CTGAGCATGGAGGAACAGGAGGCACGGGACAACCCAGTGACTCTGCCCATAAGCTCTGGGGGCCCTGAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 90 bp | AGCCTGGCCCTGCCCCATCACCTGGGACAATGGAACCAGTTGCGCTaGACCTCCAGGGGGCAGACACATGTACTCCAAGGAGCCTGGCAG | + |
Preference number: 6 (lower is better) Translates to: SLALPHHLGQWNQLR*TSRGQTHVLQGAWQ Trigger: CTGCCAGGCTCCTTGGAGTACATGTGTCTGCCCCCTGGAGGTCAAGCGCAACTGGTTCCATTGTCCCAGGTGATGGGGCAGGGCCAGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS GCA 72 bp | CTGGCTGGGAGTCCCAGTGAACCTCTGGGCTCCATCTaGTGGGTCTCCCAGACAAGCTTGAACCCGGGGACA | + |
Preference number: 6 (lower is better) Translates to: LAGSPSEPLGSI*WVSQTSLNPGT Trigger: TGTCCCCGGGTTCAAGCTTGTCTGGGAGACCCAGCAGATGGAGCCCAGAGGTTCACTGGGACTCCCAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | GCACAGGTAGACTGCAATGGTAGCGGGTGTAGACACTaGCCCCCGGCGGCTCCTTCACCACCGGAGAGCATT | + |
Preference number: 6 (lower is better) Translates to: AQVDCNGSGCRH*PPAAPSPPESI Trigger: AATGCTCTCCGGTGGTGAAGGAGCCGCCGGGGGCCAGTGTCTACACCCGCTACCATTGCAGTCTACCTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | CCCTGTTGCTCAGCAAGAAGCCTGCTCTGTGGCCCCTaGAGAGCGGGGTTCTTAGTGGCGAAGGCTGCCATG | + |
Preference number: 6 (lower is better) Translates to: PCCSARSLLCGP*RAGFLVAKAAM Trigger: CATGGCAGCCTTCGCCACTAAGAACCCCGCTCTCCAGGGGCCACAGAGCAGGCTTCTTGCTGAGCAACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | ATCACTGTGGGGCTGCTTGCCACAGGAGGAGCAGGATaGCCTGGAGGGGACTTGGCAGCCTGGCTCACACTT | + |
Preference number: 6 (lower is better) Translates to: ITVGLLATGGAG*PGGDLAAWLTL Trigger: AAGTGTGAGCCAGGCTGCCAAGTCCCCTCCAGGCCATCCTGCTCCTCCTGTGGCAAGCAGCCCCACAGTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 90 bp | GTGCCTCCTGTTCCTCCATGCTCAGCTCAACTGGAGGGTTCTCCTTaGGCTCCACAGAAGGGCTCCCTGAGGTCTCCAGGCTGGACCCAC | + |
Preference number: 6 (lower is better) Translates to: VPPVPPCSAQLEGSP*APQKGSLRSPGWTH Trigger: GTGGGTCCAGCCTGGAGACCTCAGGGAGCCCTTCTGTGGAGCCAAAGGAGAACCCTCCAGTTGAGCTGAGCATGGAGGAACAGGAGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 90 bp | ATACTGCCCTCAGGGCCCCCAGAGCTTATGGGCAGAGTCACTGGGTaGTCCCGTGCCTCCTGTTCCTCCATGCTCAGCTCAACTGGAGGG | + |
Preference number: 6 (lower is better) Translates to: ILPSGPPELMGRVTG*SRASCSSMLSSTGG Trigger: CCCTCCAGTTGAGCTGAGCATGGAGGAACAGGAGGCACGGGACAACCCAGTGACTCTGCCCATAAGCTCTGGGGGCCCTGAGGGCAGTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CCA 72 bp | GTCTCCAGGCTGGACCCACACTGCACATCCATAGCCTaGCCCTGCCCCATCACCTGGGACAATGGAACCAGT | + |
Preference number: 6 (lower is better) Translates to: VSRLDPHCTSIA*PCPITWDNGTS Trigger: ACTGGTTCCATTGTCCCAGGTGATGGGGCAGGGCCAGGCTATGGATGTGCAGTGTGGGTCCAGCCTGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CCA 72 bp | GTCCCGTGCCTCCTGTTCCTCCATGCTCAGCTCAACTaGAGGGTTCTCCTTTGGCTCCACAGAAGGGCTCCC | + |
Preference number: 6 (lower is better) Translates to: VPCLLFLHAQLN*RVLLWLHRRAP Trigger: GGGAGCCCTTCTGTGGAGCCAAAGGAGAACCCTCCAGTTGAGCTGAGCATGGAGGAACAGGAGGCACGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CCA 72 bp | AGGCCATCATACTGCCCTCAGGGCCCCCAGAGCTTATaGGCAGAGTCACTGGGTTGTCCCGTGCCTCCTGTT | + |
Preference number: 6 (lower is better) Translates to: RPSYCPQGPQSL*AESLGCPVPPV Trigger: AACAGGAGGCACGGGACAACCCAGTGACTCTGCCCATAAGCTCTGGGGGCCCTGAGGGCAGTATGATGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 72 bp | CTGGCCCTGCCCCATCACCTGGGACAATGGAACCAGTaGCGCTTGACCTCCAGGGGGCAGACACATGTACTC | + |
Preference number: 6 (lower is better) Translates to: LALPHHLGQWNQ*RLTSRGQTHVL Trigger: GAGTACATGTGTCTGCCCCCTGGAGGTCAAGCGCAACTGGTTCCATTGTCCCAGGTGATGGGGCAGGGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS TCA 72 bp | TGGAGGGTTCTCCTTTGGCTCCACAGAAGGGCTCCCTaGGGTCTCCAGGCTGGACCCACACTGCACATCCAT | + |
Preference number: 6 (lower is better) Translates to: WRVLLWLHRRAP*GLQAGPTLHIH Trigger: ATGGATGTGCAGTGTGGGTCCAGCCTGGAGACCTCAGGGAGCCCTTCTGTGGAGCCAAAGGAGAACCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS GCA 72 bp | GCCACGGTCCATGATCTTCTCCTCTTGGTCCCCTGTTaGTCAGCAAGAAGCCTGCTCTGTGGCCCCTGGAGA | + |
Preference number: 6 (lower is better) Translates to: ATVHDLLLLVPC*SARSLLCGPWR Trigger: TCTCCAGGGGCCACAGAGCAGGCTTCTTGCTGAGCAACAGGGGACCAAGAGGAGAAGATCATGGACCGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS CCA 72 bp | CTCACCCTGGCGCAGTATGAGGTGTCTGGCTCCAGCTaGGAGAGGTCCATGCTATGGGCTCGATCTAGGTTC | + |
Preference number: 6 (lower is better) Translates to: LTLAQYEVSGSS*ERSMLWARSRF Trigger: GAACCTAGATCGAGCCCATAGCATGGACCTCTCCCAGCTGGAGCCAGACACCTCATACTGCGCCAGGGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CAA 72 bp | GTTCCTCCATGCTCAGCTCAACTGGAGGGTTCTCCTTaGGCTCCACAGAAGGGCTCCCTGAGGTCTCCAGGC | + |
Preference number: 6 (lower is better) Translates to: VPPCSAQLEGSP*APQKGSLRSPG Trigger: GCCTGGAGACCTCAGGGAGCCCTTCTGTGGAGCCAAAGGAGAACCCTCCAGTTGAGCTGAGCATGGAGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS TCA 72 bp | TGCCCCATCACCTGGGACAATGGAACCAGTTGCGCTTaGCCTCCAGGGGGCAGACACATGTACTCCAAGGAG | + |
Preference number: 6 (lower is better) Translates to: CPITWDNGTSCA*PPGGRHMYSKE Trigger: CTCCTTGGAGTACATGTGTCTGCCCCCTGGAGGTCAAGCGCAACTGGTTCCATTGTCCCAGGTGATGGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS GCA 72 bp | GTAGCACTGCAGAGTCTTCAGAGGGACCGTTTCTTCTaGCTCTGTCACCCCGTGTCCCCAACAGAGAGCCAC | + |
Preference number: 6 (lower is better) Translates to: VALQSLQRDRFF*LCHPVSPTESH Trigger: GTGGCTCTCTGTTGGGGACACGGGGTGACAGAGGCAGAAGAAACGGTCCCTCTGAAGACTCTGCAGTGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000096355.4 ENSMUST00000229034.2 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS GCA 72 bp | GAGTCACTGGGTTGTCCCGTGCCTCCTGTTCCTCCATaGTCAGCTCAACTGGAGGGTTCTCCTTTGGCTCCA | + |
Preference number: 6 (lower is better) Translates to: ESLGCPVPPVPP*SAQLEGSPLAP Trigger: TGGAGCCAAAGGAGAACCCTCCAGTTGAGCTGAGCATGGAGGAACAGGAGGCACGGGACAACCCAGTGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 72 bp | CTGCCCCATCACCTGGGACAATGGAACCAGTTGCGCTaGACCTCCAGGGGGCAGACACATGTACTCCAAGGA | + |
Preference number: 6 (lower is better) Translates to: LPHHLGQWNQLR*TSRGQTHVLQG Trigger: TCCTTGGAGTACATGTGTCTGCCCCCTGGAGGTCAAGCGCAACTGGTTCCATTGTCCCAGGTGATGGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 90 bp | CACTCCAGCAGGAAACGATCCTCAGAGGAGCTGATGCTGACGTTCTaGGGAAGTGGTGGCTGCACATTCTGGGCAAGTGGCACCATGAGC | + |
Preference number: 6 (lower is better) Translates to: HSSRKRSSEELMLTF*GSGGCTFWASGTMS Trigger: GCTCATGGTGCCACTTGCCCAGAATGTGCAGCCACCACTTCCCAAGAACGTCAGCATCAGCTCCTCTGAGGATCGTTTCCTGCTGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS GCA 72 bp | GAGGAGCTGATGCTGACGTTCTTGGGAAGTGGTGGCTaGACATTCTGGGCAAGTGGCACCATGAGCTGGATG | + |
Preference number: 6 (lower is better) Translates to: EELMLTFLGSGG*TFWASGTMSWM Trigger: CATCCAGCTCATGGTGCCACTTGCCCAGAATGTGCAGCCACCACTTCCCAAGAACGTCAGCATCAGCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | CTCAGAGGAGCTGATGCTGACGTTCTTGGGAAGTGGTaGCTGCACATTCTGGGCAAGTGGCACCATGAGCTG | + |
Preference number: 6 (lower is better) Translates to: LRGADADVLGKW*LHILGKWHHEL Trigger: CAGCTCATGGTGCCACTTGCCCAGAATGTGCAGCCACCACTTCCCAAGAACGTCAGCATCAGCTCCTCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS TCA 72 bp | CTGGCGCCTGGGGCATGGGCTGATAGGGAAACTTTTTaGCAGACAAGTCCTGGACTAGGTCCTCAGTCTCAG | + |
Preference number: 6 (lower is better) Translates to: LAPGAWADRETF*QTSPGLGPQSQ Trigger: CTGAGACTGAGGACCTAGTCCAGGACTTGTCTGTCAAAAAGTTTCCCTATCAGCCCATGCCCCAGGCGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CCA 72 bp | GTTCTTGGGAAGTGGTGGCTGCACATTCTGGGCAAGTaGCACCATGAGCTGGATGCCCAGATCACTATCTGG | + |
Preference number: 6 (lower is better) Translates to: VLGKWWLHILGK*HHELDAQITIW Trigger: CCAGATAGTGATCTGGGCATCCAGCTCATGGTGCCACTTGCCCAGAATGTGCAGCCACCACTTCCCAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | ATGCTGACGTTCTTGGGAAGTGGTGGCTGCACATTCTaGGCAAGTGGCACCATGAGCTGGATGCCCAGATCA | + |
Preference number: 6 (lower is better) Translates to: MLTFLGSGGCTF*ASGTMSWMPRS Trigger: TGATCTGGGCATCCAGCTCATGGTGCCACTTGCCCAGAATGTGCAGCCACCACTTCCCAAGAACGTCAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | ATCCTCAGAGGAGCTGATGCTGACGTTCTTGGGAAGTaGTGGCTGCACATTCTGGGCAAGTGGCACCATGAG | + |
Preference number: 6 (lower is better) Translates to: ILRGADADVLGK*WLHILGKWHHE Trigger: CTCATGGTGCCACTTGCCCAGAATGTGCAGCCACCACTTCCCAAGAACGTCAGCATCAGCTCCTCTGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | GAGGTTCAAAGGCCACGGTCCATGATCTTCTCCTCTTaGTCCCCTGTTGCTCAGCAAGAAGCCTGCTCTGTG | + |
Preference number: 6 (lower is better) Translates to: EVQRPRSMIFSS*SPVAQQEACSV Trigger: CACAGAGCAGGCTTCTTGCTGAGCAACAGGGGACCAAGAGGAGAAGATCATGGACCGTGGCCTTTGAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229678.2 |
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CDS CAA 72 bp | AGGAAACGATCCTCAGAGGAGCTGATGCTGACGTTCTaGGGAAGTGGTGGCTGCACATTCTGGGCAAGTGGC | + |
Preference number: 6 (lower is better) Translates to: RKRSSEELMLTF*GSGGCTFWASG Trigger: GCCACTTGCCCAGAATGTGCAGCCACCACTTCCCAAGAACGTCAGCATCAGCTCCTCTGAGGATCGTTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CAA 72 bp | AGTCCTGGACTAGGTCCTCAGTCTCAGAACACAGACTaGGAGAGGGTGGCTTACTGTGTGGTGAGAGGGAGC | + |
Preference number: 6 (lower is better) Translates to: SPGLGPQSQNTD*ERVAYCVVRGS Trigger: GCTCCCTCTCACCACACAGTAAGCCACCCTCTCCAAGTCTGTGTTCTGAGACTGAGGACCTAGTCCAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 90 bp | AGCTGGGAGAGGTCCATGCTATGGGCTCGATCTAGGTTCTCTGTCTaGCTGTCCTCCCAGCTGTCCGATTTCTTCTTGTACTGGACCTGG | + |
Preference number: 6 (lower is better) Translates to: SWERSMLWARSRFSV*LSSQLSDFFLYWTW Trigger: CCAGGTCCAGTACAAGAAGAAATCGGACAGCTGGGAGGACAGCAAGACAGAGAACCTAGATCGAGCCCATAGCATGGACCTCTCCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS GCA 72 bp | AGTATGAGGTGTCTGGCTCCAGCTGGGAGAGGTCCATaGTATGGGCTCGATCTAGGTTCTCTGTCTTGCTGT | + |
Preference number: 6 (lower is better) Translates to: SMRCLAPAGRGP*YGLDLGSLSCC Trigger: ACAGCAAGACAGAGAACCTAGATCGAGCCCATAGCATGGACCTCTCCCAGCTGGAGCCAGACACCTCATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | TCAAACTCTATGTCCTTTGATGAAAGCCAGGAGACCTaGGCATCCCCAAGGGACACACTCCACTCCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: SNSMSFDESQET*ASPRDTLHSSR Trigger: CCTGCTGGAGTGGAGTGTGTCCCTTGGGGATGCCCAGGTCTCCTGGCTTTCATCAAAGGACATAGAGTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CAA 90 bp | AGGAGTCCTGAAGCCGCTTATAAGCCACCTCAAACTCTATGTCCTTaGATGAAAGCCAGGAGACCTGGGCATCCCCAAGGGACACACTCC | + |
Preference number: 6 (lower is better) Translates to: RSPEAAYKPPQTLCP*MKARRPGHPQGTHS Trigger: GGAGTGTGTCCCTTGGGGATGCCCAGGTCTCCTGGCTTTCATCAAAGGACATAGAGTTTGAGGTGGCTTATAAGCGGCTTCAGGACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS GCA 72 bp | TTGTTGTCTTCCAAATGTGCATATGACTCCCCCTGTTaGTCAGCAAGAAGCCTGCTCTGTGGCCCCTGGAGA | + |
Preference number: 6 (lower is better) Translates to: LLSSKCAYDSPC*SARSLLCGPWR Trigger: TCTCCAGGGGCCACAGAGCAGGCTTCTTGCTGAGCAACAGGGGGAGTCATATGCACATTTGGAAGACAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS TCA 72 bp | AATGCAGGCTGTAGCTGTCTCTGTTCTTGGTCAGGTTaGGGGTTGGAGGCTCCATCTGGATGTGGTTATAGC | + |
Preference number: 6 (lower is better) Translates to: NAGCSCLCSWSG*GLEAPSGCGYS Trigger: GCTATAACCACATCCAGATGGAGCCTCCAACCCTCAACCTGACCAAGAACAGAGACAGCTACAGCCTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CCA 72 bp | AAGTGGCACCATGAGCTGGATGCCCAGATCACTATCTaGCCGGAAGGAGTAGTAGTCTTCGTTTGTGATGGA | + |
Preference number: 6 (lower is better) Translates to: KWHHELDAQITI*PEGVVVFVCDG Trigger: TCCATCACAAACGAAGACTACTACTCCTTCCGGCCAGATAGTGATCTGGGCATCCAGCTCATGGTGCCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CAA 72 bp | AGGTCCATGCTATGGGCTCGATCTAGGTTCTCTGTCTaGCTGTCCTCCCAGCTGTCCGATTTCTTCTTGTAC | + |
Preference number: 6 (lower is better) Translates to: RSMLWARSRFSV*LSSQLSDFFLY Trigger: GTACAAGAAGAAATCGGACAGCTGGGAGGACAGCAAGACAGAGAACCTAGATCGAGCCCATAGCATGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CAA 72 bp | GAAGTTGCTCTGTGGATTCGGATGAGGCAGCTGGGGTaGTATCAGGCCCGGATGGTGGAACTCGAATTATAT | + |
Preference number: 6 (lower is better) Translates to: EVALWIRMRQLG*YQARMVELELY Trigger: ATATAATTCGAGTTCCACCATCCGGGCCTGATACAACCCCAGCTGCCTCATCCGAATCCACAGAGCAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 72 bp | TCTGTCTTGCTGTCCTCCCAGCTGTCCGATTTCTTCTaGTACTGGACCTGGAATGTGTGCTCAATGAATGAG | + |
Preference number: 6 (lower is better) Translates to: SVLLSSQLSDFF*YWTWNVCSMNE Trigger: CTCATTCATTGAGCACACATTCCAGGTCCAGTACAAGAAGAAATCGGACAGCTGGGAGGACAGCAAGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CAA 90 bp | GGAACTCGAATTATATTAGGGTCCTCTATAGTGAGAGGTGACACGTaGTTGTCTTCCAAATGTGCATATGACTCCCCCTGTTGCTCAGCA | + |
Preference number: 6 (lower is better) Translates to: GTRIILGSSIVRGDT*LSSKCAYDSPCCSA Trigger: TGCTGAGCAACAGGGGGAGTCATATGCACATTTGGAAGACAACAACGTGTCACCTCTCACTATAGAGGACCCTAATATAATTCGAGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS TCA 72 bp | CTTCTTGTACTGGACCTGGAATGTGTGCTCAATGAATaGGTAAGCCATCTTCTGAGTTTCCCAATGCAGGCT | + |
Preference number: 6 (lower is better) Translates to: LLVLDLECVLNE*VSHLLSFPMQA Trigger: AGCCTGCATTGGGAAACTCAGAAGATGGCTTACTCATTCATTGAGCACACATTCCAGGTCCAGTACAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CAA 72 bp | CATCTGGATGTGGTTATAGCTCATGATGAACTTCCCTaGTTCCAGGTGCTTAACAGAGACTGTGTACTGGCT | + |
Preference number: 6 (lower is better) Translates to: HLDVVIAHDELP*FQVLNRDCVLA Trigger: AGCCAGTACACAGTCTCTGTTAAGCACCTGGAACAAGGGAAGTTCATCATGAGCTATAACCACATCCAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |
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CDS CAA 72 bp | ATATTAGGGTCCTCTATAGTGAGAGGTGACACGTTGTaGTCTTCCAAATGTGCATATGACTCCCCCTGTTGC | + |
Preference number: 6 (lower is better) Translates to: ILGSSIVRGDTL*SSKCAYDSPCC Trigger: GCAACAGGGGGAGTCATATGCACATTTGGAAGACAACAACGTGTCACCTCTCACTATAGAGGACCCTAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 90 bp | ACTCGAATTATATTAGGGTCCTCTATAGTGAGAGGTGACACGTTGTaGTCTTCCAAATGTGCATATGACTCCCCCTGTTGCTCAGCAAGA | + |
Preference number: 6 (lower is better) Translates to: TRIILGSSIVRGDTL*SSKCAYDSPCCSAR Trigger: TCTTGCTGAGCAACAGGGGGAGTCATATGCACATTTGGAAGACAACAACGTGTCACCTCTCACTATAGAGGACCCTAATATAATTCGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS CAA 72 bp | ATTATATTAGGGTCCTCTATAGTGAGAGGTGACACGTaGTTGTCTTCCAAATGTGCATATGACTCCCCCTGT | + |
Preference number: 6 (lower is better) Translates to: IILGSSIVRGDT*LSSKCAYDSPC Trigger: ACAGGGGGAGTCATATGCACATTTGGAAGACAACAACGTGTCACCTCTCACTATAGAGGACCCTAATATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096355.4 ENSMUST00000230264.3 |
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CDS TCA 72 bp | ATTTCTTCTTGTACTGGACCTGGAATGTGTGCTCAATaGATGAGTAAGCCATCTTCTGAGTTTCCCAATGCA | + |
Preference number: 6 (lower is better) Translates to: ISSCTGPGMCAQ*MSKPSSEFPNA Trigger: TGCATTGGGAAACTCAGAAGATGGCTTACTCATTCATTGAGCACACATTCCAGGTCCAGTACAAGAAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096355.4 ENSMUST00000229678.2 ENSMUST00000230264.3 |