Pregenerated sensors for CSF2RA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059326

Ensembl transcript IDs: ENSMUST00000076046.7, ENSMUST00000237386.2

Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	ATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCCACGAGTACACCAGACGTGGGGGTaGGGAGCGGTCACGATGACG	+
Preference number: 2 (lower is better) Translates to: MHAVPAIPGTEAGGWPRVHQTWG*GAVTMT Trigger: CGTCATCGTGACCGCTCCCCACCCCCACGTCTGGTG...TACTCGTGGCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR-3UTR CCA 90 bp	ATATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCCACGAGCACCAGACGTGGGGGTaGGGAGCGGTCACGATGACG	+
Preference number: 2 (lower is better) Translates to: ICTLSLPSLELRQEDGHEHQTWG*GAVTMT Trigger: CGTCATCGTGACCGCTCCCCACCCCCACGTCTGGTG...CTCGTGGCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR-3UTR TCA 90 bp	ACAGTGGCAGGCTTCCCAGTCACCTGTGCTTCCTGTCGGGGTGGGCGGGGCTATGGGGAGCGGTCACGATaGCGTCTATCAGCATCGCTT	+
Preference number: 2 (lower is better) Translates to: TVAGFPVTCASCRGGRGYGERSR*RLSASL Trigger: AAGCGATGCTGATAGACGTCATCGTGACCGCTCCCC...ATAGCCCCGCCCACCCCGACAGGAAGCACAGGTGACTGGGAAGCCTGCCACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR-3UTR TCA 90 bp	GGGGATATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCCAATGGGCGGCCTTGATTaGCAGTGGCAGGCTTCCCAG	+
Preference number: 2 (lower is better) Translates to: GDMHAVPAIPGTEAGGWPMGGLD*QWQASQ Trigger: CTGGGAAGCCTGCCACTGTCAATCAAGGCCGCCCAT...TGGCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATATCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR-3UTR TCA 90 bp	GTGGGGATATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCATGGGCGGCCTTGATTaGCAGTGGCAGGCTTCCCAG	+
Preference number: 2 (lower is better) Translates to: VGICTLSLPSLELRQEDGMGGLD*QWQASQ Trigger: CTGGGAAGCCTGCCACTGTCAATCAAGGCCGCCCAT...GCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATATCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR-3UTR TCA 90 bp	ATATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCCACGAGGGGGAGCGGTCACGATaGCGTCTATCAGCATCGCTT	+
Preference number: 2 (lower is better) Translates to: ICTLSLPSLELRQEDGHEGERSR*RLSASL Trigger: AAGCGATGCTGATAGACGTCATCGTGACCGCTCCCC...CTCGTGGCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR-3UTR TCA 90 bp	GGCTTCCCAGTCACCTGTGCTTCCTGTCGGGGTGGGCGGGGCTATAGAGGAGGAACACGCCCACTTTGGTaGTTGATGAACAGGGCAACA	+
Preference number: 2 (lower is better) Translates to: GFPVTCASCRGGRGYRGGTRPLW*LMNRAT Trigger: TGTTGCCCTGTTCATCAATCACCAAAGTGGGCGTGT...TCCTCCTCTATAGCCCCGCCCACCCCGACAGGAAGCACAGGTGACTGGGAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR-3UTR TCA 90 bp	GTCCAGTCACACCAGACGTGGGGGTGGGGAGCGGTCACGATGACGTCTATCAGCCATCAGTTGATGTCATaGAGTTTAAGTCCTTCCTGT	+
Preference number: 2 (lower is better) Translates to: VQSHQTWGWGAVTMTSISHQLMS*SLSPSC Trigger: ACAGGAAGGACTTAAACTTCATGACATCAACTGATG...GCTGATAGACGTCATCGTGACCGCTCCCCACCCCCACGTCTGGTGTGACTGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR-3UTR TCA 90 bp	ATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCCACGAGTACATCAGTTGATGTCATaGAGTTTAAGTCCTTCCTGT	+
Preference number: 2 (lower is better) Translates to: MHAVPAIPGTEAGGWPRVHQLMS*SLSPSC Trigger: ACAGGAAGGACTTAAACTTCATGACATCAACTGATG...TACTCGTGGCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR-3UTR CAA 90 bp	ATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCCACGAGTATTGGGATGGGCGGCCTaGATTGACAGTGGCAGGCTT	+
Preference number: 3 (lower is better) Translates to: MHAVPAIPGTEAGGWPRVLGWAA*IDSGRL Trigger: AAGCCTGCCACTGTCAATCAAGGCCGCCCATCCCAA...TACTCGTGGCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR GCA 72 bp	TTGTTAAGAACTGAGCAAACTATTACGGTGGGGATATaGACGCTGTCCCTGCCATCCCTGGAACTGAGGCAG	+
Preference number: 3 (lower is better) Translates to: LLRTEQTITVGI*TLSLPSLELRQ Trigger: CTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATATCCCCACCGTAATAGTTTGCTCAGTTCTTAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR GCA 90 bp	GTCCAGTCACACCAGACGTGGGGGTGGGGAGCGGTCACGATGACGTCTATCAGCAAGCTCAGCCTCCAGTaGGCGGCCGCGCCCCCGACC	+
Preference number: 4 (lower is better) Translates to: VQSHQTWGWGAVTMTSISKLSLQ*AAAPPT Trigger: GGTCGGGGGCGCGGCCGCGCACTGGAGGCTGAGCTT...GCTGATAGACGTCATCGTGACCGCTCCCCACCCCCACGTCTGGTGTGACTGGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR TCA 90 bp	GTGGGGATATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCGGTCGAAGGTCAGGTTaGGGGCGGAGCCGGCGTCCG	+
Preference number: 4 (lower is better) Translates to: VGICTLSLPSLELRQEDGGRRSG*GRSRRP Trigger: CGGACGCCGGCTCCGCCCTCAACCTGACCTTCGACC...GCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATATCCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR TCA 90 bp	ATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCCACGAGTAGGTCGAAGGTCAGGTTaGGGGCGGAGCCGGCGTCCG	+
Preference number: 4 (lower is better) Translates to: MHAVPAIPGTEAGGWPRVGRRSG*GRSRRP Trigger: CGGACGCCGGCTCCGCCCTCAACCTGACCTTCGACC...TACTCGTGGCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR TCA 90 bp	GGCTTCCCAGTCACCTGTGCTTCCTGTCGGGGTGGGCGGGGCTATAGAGGAGGACGGACACCTTGTCCCTaGTCCCTGGGATGGGCGGGA	+
Preference number: 4 (lower is better) Translates to: GFPVTCASCRGGRGYRGGRTPCP*SLGWAG Trigger: TCCCGCCCATCCCAGGGATCAGGGACAAGGTGTCCG...TCCTCCTCTATAGCCCCGCCCACCCCGACAGGAAGCACAGGTGACTGGGAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR CCA 90 bp	GGCTTCCCAGTCACCTGTGCTTCCTGTCGGGGTGGGCGGGGCTATAGAGGAGGACCGGGGTGTGCTTCCTaGCTCTGCGCTCTGCCACTG	+
Preference number: 4 (lower is better) Translates to: GFPVTCASCRGGRGYRGGPGCAS*LCALPL Trigger: CAGTGGCAGAGCGCAGAGCCAGGAAGCACACCCCGG...TCCTCCTCTATAGCCCCGCCCACCCCGACAGGAAGCACAGGTGACTGGGAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR TCA 90 bp	CAGTGGCAGGCTTCCCAGTCACCTGTGCTTCCTGTCGGGGTGGGCGGGGCTATAGCGCCATCATCCTCCTaGACCAGCAGCGGCAACCGA	+
Preference number: 4 (lower is better) Translates to: QWQASQSPVLPVGVGGAIAPSSS*TSSGNR Trigger: TCGGTTGCCGCTGCTGGTTCAGGAGGATGATGGCGC...TATAGCCCCGCCCACCCCGACAGGAAGCACAGGTGACTGGGAAGCCTGCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR TCA 90 bp	GGGGATATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCCAGCGCCATCATCCTCCTaGACCAGCAGCGGCAACCGA	+
Preference number: 4 (lower is better) Translates to: GDMHAVPAIPGTEAGGWPAPSSS*TSSGNR Trigger: TCGGTTGCCGCTGCTGGTTCAGGAGGATGATGGCGC...TGGCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATATCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR GCA 90 bp	ACAGTGGCAGGCTTCCCAGTCACCTGTGCTTCCTGTCGGGGTGGGCGGGGCTATGGGCCCACGAGACGGTaGAGTGGGAAGAGTTACAGG	+
Preference number: 4 (lower is better) Translates to: TVAGFPVTCASCRGGRGYGPTRR*SGKSYR Trigger: CCTGTAACTCTTCCCACTGCACCGTCTCGTGGGCCC...ATAGCCCCGCCCACCCCGACAGGAAGCACAGGTGACTGGGAAGCCTGCCACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR GCA 90 bp	GTGGGGATATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCTGTGCTTCCTGGCTCTaGGCTCTGCCACTGGACCTC	+
Preference number: 4 (lower is better) Translates to: VGICTLSLPSLELRQEDGCASWL*ALPLDL Trigger: GAGGTCCAGTGGCAGAGCGCAGAGCCAGGAAGCACA...GCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATATCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR CCA 90 bp	GGCTTCCCAGTCACCTGTGCTTCCTGTCGGGGTGGGCGGGGCTATAGAGGAGGACACGAGACGGTGCAGTaGGAAGAGTTACAGGACGCG	+
Preference number: 4 (lower is better) Translates to: GFPVTCASCRGGRGYRGGHETVQ*EELQDA Trigger: CGCGTCCTGTAACTCTTCCCACTGCACCGTCTCGTG...TCCTCCTCTATAGCCCCGCCCACCCCGACAGGAAGCACAGGTGACTGGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR GCA 90 bp	ATATGCACGCTGTCCCTGCCATCCCTGGAACTGAGGCAGGAGGATGGCCACGAGGGGCCCACGAGACGGTaGAGTGGGAAGAGTTACAGG	+
Preference number: 4 (lower is better) Translates to: ICTLSLPSLELRQEDGHEGPTRR*SGKSYR Trigger: CCTGTAACTCTTCCCACTGCACCGTCTCGTGGGCCC...CTCGTGGCCATCCTCCTGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR CCA 90 bp	GTCCAGTCACACCAGACGTGGGGGTGGGGAGCGGTCACGATGACGTCTATCAGCCACTGGACCTCAAACTaGAAGTCCCGGGCCGTCAAG	+
Preference number: 4 (lower is better) Translates to: VQSHQTWGWGAVTMTSISHWTSN*KSRAVK Trigger: CTTGACGGCCCGGGACTTCCAGTTTGAGGTCCAGTG...GCTGATAGACGTCATCGTGACCGCTCCCCACCCCCACGTCTGGTGTGACTGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR GCA 90 bp	TCCAGGGTGATTGACAGGATGAGACTGGACACGCCCACTTTGGTGATTGATGAAAAGCTCAGCCTCCAGTaGGCGGCCGCGCCCCCGACC	+
Preference number: 4 (lower is better) Translates to: SRVIDRMRLDTPTLVIDEKLSLQ*AAAPPT Trigger: GGTCGGGGGCGCGGCCGCGCACTGGAGGCTGAGCTT...TTCATCAATCACCAAAGTGGGCGTGTCCAGTCTCATCCTGTCAATCACCCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS-3UTR CCA 90 bp	CACCAGACGTGGGGGTGGGGAGCGGTCACGATGACGTCTATCAGCATCGCTTCACACGAGACGGTGCAGTaGGAAGAGTTACAGGACGCG	+
Preference number: 4 (lower is better) Translates to: HQTWGWGAVTMTSISIASHETVQ*EELQDA Trigger: CGCGTCCTGTAACTCTTCCCACTGCACCGTCTCGTG...TGAAGCGATGCTGATAGACGTCATCGTGACCGCTCCCCACCCCCACGTCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
3UTR CAA 72 bp	AGGGTGATTGACAGGATGAGACTGGACACGCCCACTTaGGTGATTGATGAACAGGGCAACAGGGGTCCAGTC	+
Preference number: 4 (lower is better) Translates to: RVIDRMRLDTPT*VIDEQGNRGPV Trigger: GACTGGACCCCTGTTGCCCTGTTCATCAATCACCAAAGTGGGCGTGTCCAGTCTCATCCTGTCAATCACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS TCA 90 bp	TCTCGCAGGTCAGGTTCTCCGCCCCCGAGCCCGCCGCGCCTTCGTTaGCGAAGCTCAGCCTCCAGTGCGCGGCCGCGCCCCCGACCGTGC	+
Preference number: 5 (lower is better) Translates to: SRRSGSPPPSPPRLR*RSSASSARPRPRPC Trigger: GCACGGTCGGGGGCGCGGCCGCGCACTGGAGGCTGAGCTTCGTCAACGAAGGCGCGGCGGGCTCGGGGGCGGAGAACCTGACCTGCGAGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS TCA 90 bp	CGCAGGCCCAGGTCAGCGTCCGAGTCCAGGGGTCGAAGGTCAGGTTaGGGGCGGAGCCGGCGTCCGGTGTGGTCGGAGCCAGAAGGGCCT	+
Preference number: 5 (lower is better) Translates to: RRPRSASESRGRRSG*GRSRRPVWSEPEGP Trigger: AGGCCCTTCTGGCTCCGACCACACCGGACGCCGGCTCCGCCCTCAACCTGACCTTCGACCCCTGGACTCGGACGCTGACCTGGGCCTGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS GCA 90 bp	GCCGCGCCCCCGACCGTGCCATTGACATCCAGCGTGACACCGTGGTaGAGCGCCATCATCCTCCTGAACCAGCAGCGGCAACCGAAGGGC	+
Preference number: 5 (lower is better) Translates to: AAPPTVPLTSSVTPW*SAIILLNQQRQPKG Trigger: GCCCTTCGGTTGCCGCTGCTGGTTCAGGAGGATGATGGCGCTGCACCACGGTGTCACGCTGGATGTCAATGGCACGGTCGGGGGCGCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS CCA 90 bp	GCGGCCGCGCCCCCGACCGTGCCATTGACATCCAGCGTGACACCGTaGTGCAGCGCCATCATCCTCCTGAACCAGCAGCGGCAACCGAAG	+
Preference number: 5 (lower is better) Translates to: AAAPPTVPLTSSVTP*CSAIILLNQQRQPK Trigger: CTTCGGTTGCCGCTGCTGGTTCAGGAGGATGATGGCGCTGCACCACGGTGTCACGCTGGATGTCAATGGCACGGTCGGGGGCGCGGCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS GCA 90 bp	GCTCTGCCACTGGACCTCAAACTGGAAGTCCCGGGCCGTCAAGGATaGCCAGGTCGAGGGCGGGGCCCACGAGACGGTGCAGTGGGAAGA	+
Preference number: 5 (lower is better) Translates to: ALPLDLKLEVPGRQG*PGRGRGPRDGAVGR Trigger: TCTTCCCACTGCACCGTCTCGTGGGCCCCGCCCTCGACCTGGGCATCCTTGACGGCCCGGGACTTCCAGTTTGAGGTCCAGTGGCAGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS CCA 90 bp	ACGAGCACCTTCCGGGGTGTGCTTCCTGGCTCTGCGCTCTGCCACTaGACCTCAAACTGGAAGTCCCGGGCCGTCAAGGATGCCCAGGTC	+
Preference number: 5 (lower is better) Translates to: TSTFRGVLPGSALCH*TSNWKSRAVKDAQV Trigger: GACCTGGGCATCCTTGACGGCCCGGGACTTCCAGTTTGAGGTCCAGTGGCAGAGCGCAGAGCCAGGAAGCACACCCCGGAAGGTGCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS CAA 90 bp	ATCTCGCAGGTCAGGTTCTCCGCCCCCGAGCCCGCCGCGCCTTCGTaGACGAAGCTCAGCCTCCAGTGCGCGGCCGCGCCCCCGACCGTG	+
Preference number: 6 (lower is better) Translates to: ISQVRFSAPEPAAPS*TKLSLQCAAAPPTV Trigger: CACGGTCGGGGGCGCGGCCGCGCACTGGAGGCTGAGCTTCGTCAACGAAGGCGCGGCGGGCTCGGGGGCGGAGAACCTGACCTGCGAGAT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS TCA 72 bp	CCGGTGTATCCCCGCCTCCCGCGAGGTCACGGTGCATaGCGTCACCGTGACGTTCCCCGCGGCGGTGTCGCA	+
Preference number: 6 (lower is better) Translates to: PVYPRLPRGHGA*RHRDVPRGGVA Trigger: TGCGACACCGCCGCGGGGAACGTCACGGTGACGTCATGCACCGTGACCTCGCGGGAGGCGGGGATACACCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS TCA 72 bp	AGGTCAGCGTCCGAGTCCAGGGGTCGAAGGTCAGGTTaGGGGCGGAGCCGGCGTCCGGTGTGGTCGGAGCCA	+
Preference number: 6 (lower is better) Translates to: RSASESRGRRSG*GRSRRPVWSEP Trigger: TGGCTCCGACCACACCGGACGCCGGCTCCGCCCTCAACCTGACCTTCGACCCCTGGACTCGGACGCTGACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS CCA 72 bp	GCCCAGGTCGAGGGCGGGGCCCACGAGACGGTGCAGTaGGAAGAGTTACAGGACGCGGTGACGTCACGTGGG	+
Preference number: 6 (lower is better) Translates to: AQVEGGAHETVQ*EELQDAVTSRG Trigger: CCCACGTGACGTCACCGCGTCCTGTAACTCTTCCCACTGCACCGTCTCGTGGGCCCCGCCCTCGACCTGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS TCA 72 bp	GAGCCGGCGTCCGGTGTGGTCGGAGCCAGAAGGGCCTaGGTTCCCGGAAGCAGTAGCGTGGAGAAGAGCAGG	+
Preference number: 6 (lower is better) Translates to: EPASGVVGARRA*VPGSSSVEKSR Trigger: CCTGCTCTTCTCCACGCTACTGCTTCCGGGAACTCAGGCCCTTCTGGCTCCGACCACACCGGACGCCGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS TCA 72 bp	CAGGGTTCACTCGCACGTCGTCGGACACCTTGTCCCTaGTCCCTGGGATGGGCGGGAAGAGTCGGCGCGTCA	+
Preference number: 6 (lower is better) Translates to: QGSLARRRTPCP*SLGWAGRVGAS Trigger: TGACGCGCCGACTCTTCCCGCCCATCCCAGGGATCAGGGACAAGGTGTCCGACGACGTGCGAGTGAACCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS CCA 72 bp	CCCCCGACCGTGCCATTGACATCCAGCGTGACACCGTaGTGCAGCGCCATCATCCTCCTGAACCAGCAGCGG	+
Preference number: 6 (lower is better) Translates to: PPTVPLTSSVTP*CSAIILLNQQR Trigger: CCGCTGCTGGTTCAGGAGGATGATGGCGCTGCACCACGGTGTCACGCTGGATGTCAATGGCACGGTCGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2
CDS GCA 72 bp	CCGACCGTGCCATTGACATCCAGCGTGACACCGTGGTaGAGCGCCATCATCCTCCTGAACCAGCAGCGGCAA	+
Preference number: 6 (lower is better) Translates to: PTVPLTSSVTPW*SAIILLNQQRQ Trigger: TTGCCGCTGCTGGTTCAGGAGGATGATGGCGCTGCACCACGGTGTCACGCTGGATGTCAATGGCACGGTCGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076046.7 ENSMUST00000237386.2

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