Pregenerated sensors for CSE1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002718Ensembl transcript IDs: ENSMUST00000002790.14, ENSMUST00000163437.2, ENSMUST00000164974.2, ENSMUST00000168599.8, ENSMUST00000169290.8
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCTGCCTGCAGGTAACCTTGGAGATACTGCAAGGCTTCTGCATTaGGGCTGGTGCTCACCATCGAGGGAACCCTTCCAGGACAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: WLPAGNLGDTARLLH*GWCSPSREPFQDKQ Trigger: CTGCTTGTCCTGGAAGGGTTCCCTCGATGGTGAGCACCAGCCTCAATGCAGAAGCCTTGCAGTATCTCCAAGGTTACCTGCAGGCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR CCA 90 bp | AGCCGCTGCATGGTCAGGAAGATGGAGTTCACAACAGGGTCACACTaGCTGCCTGCAGGTAACCTTGGAGATACTGCAAGGCTTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: SRCMVRKMEFTTGSH*LPAGNLGDTARLLH Trigger: ATGCAGAAGCCTTGCAGTATCTCCAAGGTTACCTGCAGGCAGCCAGTGTGACCCTGTTGTGAACTCCATCTTCCTGACCATGCAGCGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR GCA 90 bp | GCTGCATGGTCAGGAAGATGGAGTTCACAACAGGGTCACACTGGCTaGCTGCAGGTAACCTTGGAGATACTGCAAGGCTTCTGCATTGAG | + |
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Preference number: 1 (lower is better) Translates to: AAWSGRWSSQQGHTG*LQVTLEILQGFCIE Trigger: CTCAATGCAGAAGCCTTGCAGTATCTCCAAGGTTACCTGCAGGCAGCCAGTGTGACCCTGTTGTGAACTCCATCTTCCTGACCATGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR CCA 90 bp | CTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATaGTCAGGAAGATGGAGTTCACAACAGGGTCACACTGGCTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: LRSPHGSKKPSSAAA*SGRWSSQQGHTGCL Trigger: CAGGCAGCCAGTGTGACCCTGTTGTGAACTCCATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR CCA 90 bp | GCTGCAGCAGTTGCTATTGTACTTGAGCCTCGTTCTAAGAATGCCTaGAGCAGCCTCACTAGAGCAGGGATGTTTCCTGTCCTTTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: AAAVAIVLEPRSKNA*SSLTRAGMFPVLSH Trigger: GTGGGAAAGGACAGGAAACATCCCTGCTCTAGTGAGGCTGCTCCAGGCATTCTTAGAACGAGGCTCAAGTACAATAGCAACTGCTGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR TCA 90 bp | TCTTGCAGGAGGGAGAAACTTCTCATGATAGAGAGTGGTATTGTTTaGCCCTCTCATAGTGAACAGCCTTTCGAGAGCATGTGCGGCATA | + |
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Preference number: 1 (lower is better) Translates to: SCRREKLLMIESGIV*PSHSEQPFESMCGI Trigger: TATGCCGCACATGCTCTCGAAAGGCTGTTCACTATGAGAGGGTCAAACAATACCACTCTCTATCATGAGAAGTTTCTCCCTCCTGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR TCA 90 bp | CTGACCTACAGGATCATGTTCCTTTTTACCAGCAAATGCCAGCTGTaGGAAGGCAGTCTGGTATCCTGGTGTATCTTCTATGTCAATGAA | + |
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Preference number: 1 (lower is better) Translates to: LTYRIMFLFTSKCQL*EGSLVSWCIFYVNE Trigger: TTCATTGACATAGAAGATACACCAGGATACCAGACTGCCTTCTCACAGCTGGCATTTGCTGGTAAAAAGGAACATGATCCTGTAGGTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR GCA 90 bp | GTGGTCTTGGAGTTTTGCAGTCTCTGGAATAGTAGAATGAAGATCTaGTTCCTATACTGGTCAACTGATTCAGGAGGCATGTGTTCGATT | + |
|
Preference number: 1 (lower is better) Translates to: VVLEFCSLWNSRMKI*FLYWSTDSGGMCSI Trigger: AATCGAACACATGCCTCCTGAATCAGTTGACCAGTATAGGAAGCAGATCTTCATTCTACTATTCCAGAGACTGCAAAACTCCAAGACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR CCA 90 bp | GACAAGCAGTTGACAGTTTGTGAAGTGACTGTGCCAGATGGATTTTaGGGTTGTTTACCATCTGACCTACAGGATCATGTTCCTTTTTAC | + |
|
Preference number: 1 (lower is better) Translates to: DKQLTVCEVTVPDGF*GCLPSDLQDHVPFY Trigger: GTAAAAAGGAACATGATCCTGTAGGTCAGATGGTAAACAACCCCAAAATCCATCTGGCACAGTCACTTCACAAACTGTCAACTGCTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR CCA 90 bp | AAGAAACTCTTGATAAACTTGGTGGTCTTGGAGTTTTGCAGTCTCTaGAATAGTAGAATGAAGATCTGCTTCCTATACTGGTCAACTGAT | + |
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Preference number: 1 (lower is better) Translates to: KKLLINLVVLEFCSL*NSRMKICFLYWSTD Trigger: ATCAGTTGACCAGTATAGGAAGCAGATCTTCATTCTACTATTCCAGAGACTGCAAAACTCCAAGACCACCAAGTTTATCAAGAGTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR GCA 90 bp | AGCAGCAGGGTTAGCTTTGCAGGTTATTCTTATAGACAAGCATATTaGTTCAAACATGTAGTGATTGAAATGAGGTTTACTGGGATTCTT | + |
|
Preference number: 1 (lower is better) Translates to: SSRVSFAGYSYRQAY*FKHVVIEMRFTGIL Trigger: AAGAATCCCAGTAAACCTCATTTCAATCACTACATGTTTGAAGCAATATGCTTGTCTATAAGAATAACCTGCAAAGCTAACCCTGCTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR GCA 90 bp | ATAAACACTAAGAAACTCTTGATAAACTTGGTGGTCTTGGAGTTTTaGAGTCTCTGGAATAGTAGAATGAAGATCTGCTTCCTATACTGG | + |
|
Preference number: 1 (lower is better) Translates to: INTKKLLINLVVLEF*SLWNSRMKICFLYW Trigger: CCAGTATAGGAAGCAGATCTTCATTCTACTATTCCAGAGACTGCAAAACTCCAAGACCACCAAGTTTATCAAGAGTTTCTTAGTGTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCACCATCCTCAGCCGCTaGATGGTCAGGAAGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: FSRAVLRSPHGSKKPSSATILSR*MVRKME Trigger: CTCCATCTTCCTGACCATGCAGCGGCTGAGGATGGT...GGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCAGGAAGATACCATCCTCAGCCGCTaGATGGTCAGGAAGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: EVHMVLRNHPQPLHGQEDTILSR*MVRKME Trigger: CTCCATCTTCCTGACCATGCAGCGGCTGAGGATGGT...ATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATCCTCAGCCGCTGCATGGTCAGGAAGATGGAGTTCACAACAGGGTCACACGGTGATCGTTTGCCTTaGATGCAATCAGCTTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TILSRCMVRKMEFTTGSHGDRLP*MQSASG Trigger: TCCAGAAGCTGATTGCATCCAAGGCAAACGATCACC...GTGTGACCCTGTTGTGAACTCCATCTTCCTGACCATGCAGCGGCTGAGGATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGTAATCCAGGAATTTTGTCAGCTGCAGCAGTTGCTATTGTACTTGAGCCTCTCCCACAGTACTGGCTaGAGGAGGTGGGGAAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: PVIQEFCQLQQLLLYLSLSHSTG*RRWGNK Trigger: CTTGTTTCCCCACCTCCTTCAGCCAGTACTGTGGGA...GAGGCTCAAGTACAATAGCAACTGCTGCAGCTGACAAAATTCCTGGATTACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR-3UTR TCA 90 bp | GCAATCAGCTTCTGGAAGACACCCAGTAATCCAGGAATTTTGTCAGCTGCAGCACTCTCAGCCTCCAGGTaGCTGATCAAGAGGGGAATA | + |
|
Preference number: 2 (lower is better) Translates to: AISFWKTPSNPGILSAAALSASR*LIKRGI Trigger: TATTCCCCTCTTGATCAGTCACCTGGAGGCTGAGAG...TGCTGCAGCTGACAAAATTCCTGGATTACTGGGTGTCTTCCAGAAGCTGATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR CAA 90 bp | CCAGTAATCCAGGAATTTTGTCAGCTGCAGCAGTTGCTATTGTACTaGAGCCTCGTTCTAAGAATGCCTGGAGCAGCCTCACTAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PVIQEFCQLQQLLLY*SLVLRMPGAASLEQ Trigger: CTGCTCTAGTGAGGCTGCTCCAGGCATTCTTAGAACGAGGCTCAAGTACAATAGCAACTGCTGCAGCTGACAAAATTCCTGGATTACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR CAA 90 bp | TCTGGAAGACACCCAGTAATCCAGGAATTTTGTCAGCTGCAGCAGTaGCTATTGTACTTGAGCCTCGTTCTAAGAATGCCTGGAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SGRHPVIQEFCQLQQ*LLYLSLVLRMPGAA Trigger: GGCTGCTCCAGGCATTCTTAGAACGAGGCTCAAGTACAATAGCAACTGCTGCAGCTGACAAAATTCCTGGATTACTGGGTGTCTTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR CAA 90 bp | TGTGAGCTGCGTGATGAGAGTGGGGATATAGGGGATGATGGCCTCTaGCAGGAGGGAGAAACTTCTCATGATAGAGAGTGGTATTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: CELRDESGDIGDDGL*QEGETSHDREWYCL Trigger: CAAACAATACCACTCTCTATCATGAGAAGTTTCTCCCTCCTGCAAGAGGCCATCATCCCCTATATCCCCACTCTCATCACGCAGCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATCAGCTTCTGGAAGACACCCAGTAATCCAGGAATTTTGTCAGCTGCAGCACGTTCTAAGAATGCCTaGAGCAGCCTCACTAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AISFWKTPSNPGILSAAARSKNA*SSLTRA Trigger: TGCTCTAGTGAGGCTGCTCCAGGCATTCTTAGAACG...TGCTGCAGCTGACAAAATTCCTGGATTACTGGGTGTCTTCCAGAAGCTGATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTCAGCTGCAGCAGTTGCTATTGTACTTGAGCCTCGTTCTAAGAATGCCTCCTTTCCCACAGTACTaGCTGAAGGAGGTGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FCQLQQLLLYLSLVLRMPPFPQY*LKEVGK Trigger: TTTCCCCACCTCCTTCAGCCAGTACTGTGGGAAAGG...AGGCATTCTTAGAACGAGGCTCAAGTACAATAGCAACTGCTGCAGCTGACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR-3UTR CCA 90 bp | GTACTGGCTGAAGGAGGTGGGGAAACAAGGCCATATAGGAAGACGGGATATCATATCTGCTTCCTATACTaGTCAACTGATTCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: VLAEGGGETRPYRKTGYHICFLY*STDSGG Trigger: GCCTCCTGAATCAGTTGACCAGTATAGGAAGCAGAT...ATGATATCCCGTCTTCCTATATGGCCTTGTTTCCCCACCTCCTTCAGCCAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR CAA 90 bp | CAATATTTTCTGTCCTCTGTAAGAGTTTGTGACAAGTTCAAGAGGTaGGAAACCTGTGTTGCTTCAGCAGGGCCGTGCTCAGAAGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: QYFLSSVRVCDKFKR*ETCVASAGPCSEVH Trigger: GTGGACTTCTGAGCACGGCCCTGCTGAAGCAACACAGGTTTCCAACCTCTTGAACTTGTCACAAACTCTTACAGAGGACAGAAAATATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAATGAAGATCTGCTTCCTATACTGGTCAACTGATTCAGGAGGCATGTGTCCTTTCCCACAGTACTaGCTGAAGGAGGTGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SRMKICFLYWSTDSGGMCPFPQY*LKEVGK Trigger: TTTCCCCACCTCCTTCAGCCAGTACTGTGGGAAAGG...ACACATGCCTCCTGAATCAGTTGACCAGTATAGGAAGCAGATCTTCATTCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR CAA 90 bp | TTCAGGAGGCATGTGTTCGATTATACTGTTGAGAAGATAGAAACCTaGGTGATCGTTTGCCTTGGATGCAATCAGCTTCTGGAAGACACC | + |
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Preference number: 2 (lower is better) Translates to: FRRHVFDYTVEKIET*VIVCLGCNQLLEDT Trigger: GGTGTCTTCCAGAAGCTGATTGCATCCAAGGCAAACGATCACCAAGGTTTCTATCTTCTCAACAGTATAATCGAACACATGCCTCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTAATCCAGGAATTTTGTCAGCTGCAGCAGTTGCTATTGTACTTGAGCCTCTCTGTAAGAGTTTGTaGCAAGTTCAAGAGGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: PSNPGILSAAAVAIVLEPLCKSL*QVQEVG Trigger: TCCAACCTCTTGAACTTGTCACAAACTCTTACAGAG...AGGCTCAAGTACAATAGCAACTGCTGCAGCTGACAAAATTCCTGGATTACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAATGAAGATCTGCTTCCTATACTGGTCAACTGATTCAGGAGGCATGTGTGATGCAATCAGCTTCTaGAAGACACCCAGTAATCCA | + |
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Preference number: 2 (lower is better) Translates to: SRMKICFLYWSTDSGGMCDAISF*KTPSNP Trigger: TGGATTACTGGGTGTCTTCCAGAAGCTGATTGCATC...ACACATGCCTCCTGAATCAGTTGACCAGTATAGGAAGCAGATCTTCATTCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAATCAGCTTCTGGAAGACACCCAGTAATCCAGGAATTTTGTCAGCTGCAGGACAAACAACCTCATTaGCTTACAGCAATATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: MQSASGRHPVIQEFCQLQDKQPH*LTAIFS Trigger: AGAAAATATTGCTGTAAGCCAATGAGGTTGTTTGTC...CTGCAGCTGACAAAATTCCTGGATTACTGGGTGTCTTCCAGAAGCTGATTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR-3UTR CAA 90 bp | ACCATCCTCAGCCGCTGCATGGTCAGGAAGATGGAGTTCACAACAGGGTCACACGGGGATGATGGCCTCTaGCAGGAGGGAGAAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: TILSRCMVRKMEFTTGSHGDDGL*QEGETS Trigger: AGAAGTTTCTCCCTCCTGCAAGAGGCCATCATCCCC...GTGTGACCCTGTTGTGAACTCCATCTTCCTGACCATGCAGCGGCTGAGGATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR TCA 72 bp | GCAGGTAACCTTGGAGATACTGCAAGGCTTCTGCATTaGGGCTGGTGCTCACCATCGAGGGAACCCTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: AGNLGDTARLLH*GWCSPSREPFQ Trigger: CTGGAAGGGTTCCCTCGATGGTGAGCACCAGCCTCAATGCAGAAGCCTTGCAGTATCTCCAAGGTTACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR GCA 72 bp | TCAGGAAGATGGAGTTCACAACAGGGTCACACTGGCTaGCTGCAGGTAACCTTGGAGATACTGCAAGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: SGRWSSQQGHTG*LQVTLEILQGF Trigger: GAAGCCTTGCAGTATCTCCAAGGTTACCTGCAGGCAGCCAGTGTGACCCTGTTGTGAACTCCATCTTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR-3UTR CAA 90 bp | ACCATCCTCAGCCGCTGCATGGTCAGGAAGATGGAGTTCACAACAGGGTCACACAGTAATCCAGGAATTTaGTCAGCTGCAGCAGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: TILSRCMVRKMEFTTGSHSNPGI*SAAAVA Trigger: AGCAACTGCTGCAGCTGACAAAATTCCTGGATTACT...GTGTGACCCTGTTGTGAACTCCATCTTCCTGACCATGCAGCGGCTGAGGATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCAACCTTGGTGATCGTTaGCCTTGGATGCAATCAGCT | + |
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Preference number: 3 (lower is better) Translates to: FSRAVLRSPHGSKKPSSANLGDR*PWMQSA Trigger: AGCTGATTGCATCCAAGGCAAACGATCACCAAGGTT...GGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR CCA 72 bp | CCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATaGTCAGGAAGATGGAGTTCACAACAGGGTCACACT | + |
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Preference number: 3 (lower is better) Translates to: PHGSKKPSSAAA*SGRWSSQQGHT Trigger: AGTGTGACCCTGTTGTGAACTCCATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR GCA 72 bp | AAGAGGTTGGAAACCTGTGTTGCTTCAGCAGGGCCGTaGTCAGAAGTCCACATGGTTCTAAGAAACCATCCT | + |
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Preference number: 3 (lower is better) Translates to: KRLETCVASAGP*SEVHMVLRNHP Trigger: AGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAAGCAACACAGGTTTCCAACCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
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| 3UTR CCA 72 bp | GTTGCTATTGTACTTGAGCCTCGTTCTAAGAATGCCTaGAGCAGCCTCACTAGAGCAGGGATGTTTCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VAIVLEPRSKNA*SSLTRAGMFPV Trigger: GACAGGAAACATCCCTGCTCTAGTGAGGCTGCTCCAGGCATTCTTAGAACGAGGCTCAAGTACAATAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR-3UTR CAA 90 bp | GTACTGGCTGAAGGAGGTGGGGAAACAAGGCCATATAGGAAGACGGGATATCATAACCTTGGTGATCGTTaGCCTTGGATGCAATCAGCT | + |
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Preference number: 3 (lower is better) Translates to: VLAEGGGETRPYRKTGYHNLGDR*PWMQSA Trigger: AGCTGATTGCATCCAAGGCAAACGATCACCAAGGTT...ATGATATCCCGTCTTCCTATATGGCCTTGTTTCCCCACCTCCTTCAGCCAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGCTATTGTACTTGAGCCTCGTTCTAAGAATGCCTGGAGCAGCCTCACTAGAGCAGCAGGGTTAGCTTaGCAGGTTATTCTTATAGAC | + |
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Preference number: 3 (lower is better) Translates to: VAIVLEPRSKNAWSSLTRAAGLA*QVILID Trigger: GTCTATAAGAATAACCTGCAAAGCTAACCCTGCTGC...TCTAGTGAGGCTGCTCCAGGCATTCTTAGAACGAGGCTCAAGTACAATAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR-3UTR CAA 90 bp | AGAAACCTTGGTGATCGTTTGCCTTGGATGCAATCAGCTTCTGGAAGACACCCAGCAGCAGGGTTAGCTTaGCAGGTTATTCTTATAGAC | + |
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Preference number: 3 (lower is better) Translates to: RNLGDRLPWMQSASGRHPAAGLA*QVILID Trigger: GTCTATAAGAATAACCTGCAAAGCTAACCCTGCTGC...TGGGTGTCTTCCAGAAGCTGATTGCATCCAAGGCAAACGATCACCAAGGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR TCA 72 bp | CAACTGATTCAGGAGGCATGTGTTCGATTATACTGTTaGGAAGATAGAAACCTTGGTGATCGTTTGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: QLIQEACVRLYC*EDRNLGDRLPW Trigger: CCAAGGCAAACGATCACCAAGGTTTCTATCTTCTCAACAGTATAATCGAACACATGCCTCCTGAATCAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
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| 3UTR GCA 72 bp | GAGTTTTGCAGTCTCTGGAATAGTAGAATGAAGATCTaGTTCCTATACTGGTCAACTGATTCAGGAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: EFCSLWNSRMKI*FLYWSTDSGGM Trigger: CATGCCTCCTGAATCAGTTGACCAGTATAGGAAGCAGATCTTCATTCTACTATTCCAGAGACTGCAAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR CCA 72 bp | TTGACAGTTTGTGAAGTGACTGTGCCAGATGGATTTTaGGGTTGTTTACCATCTGACCTACAGGATCATGTT | + |
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Preference number: 3 (lower is better) Translates to: LTVCEVTVPDGF*GCLPSDLQDHV Trigger: AACATGATCCTGTAGGTCAGATGGTAAACAACCCCAAAATCCATCTGGCACAGTCACTTCACAAACTGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR TCA 72 bp | TGGTCTTGGAGTTTTGCAGTCTCTGGAATAGTAGAATaGAGATCTGCTTCCTATACTGGTCAACTGATTCAG | + |
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Preference number: 3 (lower is better) Translates to: WSWSFAVSGIVE*RSASYTGQLIQ Trigger: CTGAATCAGTTGACCAGTATAGGAAGCAGATCTTCATTCTACTATTCCAGAGACTGCAAAACTCCAAGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR TCA 72 bp | CTTACAGCAATATTTTCTGTCCTCTGTAAGAGTTTGTaGCAAGTTCAAGAGGTTGGAAACCTGTGTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LTAIFSVLCKSL*QVQEVGNLCCF Trigger: GAAGCAACACAGGTTTCCAACCTCTTGAACTTGTCACAAACTCTTACAGAGGACAGAAAATATTGCTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
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| 3UTR GCA 72 bp | GTCTGGTATCCTGGTGTATCTTCTATGTCAATGAAATaGTCTTCATCAGGAATGCTGTCATCTTCAGGTAAT | + |
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Preference number: 3 (lower is better) Translates to: VWYPGVSSMSMK*SSSGMLSSSGN Trigger: ATTACCTGAAGATGACAGCATTCCTGATGAAGAGCATTTCATTGACATAGAAGATACACCAGGATACCAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| 3UTR CCA 72 bp | CTCTGGAATAGTAGAATGAAGATCTGCTTCCTATACTaGTCAACTGATTCAGGAGGCATGTGTTCGATTATA | + |
|
Preference number: 3 (lower is better) Translates to: LWNSRMKICFLY*STDSGGMCSII Trigger: TATAATCGAACACATGCCTCCTGAATCAGTTGACCAGTATAGGAAGCAGATCTTCATTCTACTATTCCAGAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| 3UTR CCA 72 bp | TTGATAAACTTGGTGGTCTTGGAGTTTTGCAGTCTCTaGAATAGTAGAATGAAGATCTGCTTCCTATACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LINLVVLEFCSL*NSRMKICFLYW Trigger: CCAGTATAGGAAGCAGATCTTCATTCTACTATTCCAGAGACTGCAAAACTCCAAGACCACCAAGTTTATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| 3UTR GCA 72 bp | AAGAAACTCTTGATAAACTTGGTGGTCTTGGAGTTTTaGAGTCTCTGGAATAGTAGAATGAAGATCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KKLLINLVVLEF*SLWNSRMKICF Trigger: GAAGCAGATCTTCATTCTACTATTCCAGAGACTGCAAAACTCCAAGACCACCAAGTTTATCAAGAGTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| 3UTR CCA 72 bp | ATCAGTTATATTGATGATCAAGACAAACAACCTCATTaGCTTACAGCAATATTTTCTGTCCTCTGTAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ISYIDDQDKQPH*LTAIFSVLCKS Trigger: ACTCTTACAGAGGACAGAAAATATTGCTGTAAGCCAATGAGGTTGTTTGTCTTGATCATCAATATAACTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCACAGGGTCACACTGGCTaGCTGCAGGTAACCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFSRAVLRSPHGSKKPSSQGHTG*LQVTLE Trigger: CTCCAAGGTTACCTGCAGGCAGCCAGTGTGACCCTG...TGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTCCTTTCCCACAGTACTaGCTGAAGGAGGTGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRAVLRSPHGSKKPSSAAPFPQY*LKEVGK Trigger: TTTCCCCACCTCCTTCAGCCAGTACTGTGGGAAAGG...AGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | TTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCCTCTCAGCCTCCAGGTaGCTGATCAAGAGGGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: FSRAVLRSPHGSKKPSSALSASR*LIKRGI Trigger: TATTCCCCTCTTGATCAGTCACCTGGAGGCTGAGAG...GGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | GAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCAGGAAGATGCAAGGCTTCTGCATTaGGGCTGGTGCTCACCATCG | + |
|
Preference number: 4 (lower is better) Translates to: EVHMVLRNHPQPLHGQEDARLLH*GWCSPS Trigger: CGATGGTGAGCACCAGCCTCAATGCAGAAGCCTTGC...ATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGAGAAACTTCTCAGCTaGCCGTCTAATGGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SRAVLRSPHGSKKPSSAAEKLLS*PSNGRI Trigger: GATCCTGCCATTAGACGGCCAGCTGAGAAGTTTCTC...AGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGATACTGCAAGGCTTCTGCATTGAGGCTGGTGCTCACCATCGAGGGAACCGAGAAACTTCTCAGCTaGCCGTCTAATGGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: WRYCKASALRLVLTIEGTEKLLS*PSNGRI Trigger: GATCCTGCCATTAGACGGCCAGCTGAGAAGTTTCTC...GGTTCCCTCGATGGTGAGCACCAGCCTCAATGCAGAAGCCTTGCAGTATCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGTTCATTGGCTTGCGTaGTTCCATGCTTCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAVLRSPHGSKKPSSAAVHWLA*FHASVS Trigger: AGACACAGAAGCATGGAATCACGCAAGCCAATGAAC...AGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | CCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTAGCTTCTGTGTGAGCTaGGTGATGAGAGTGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PCSEVHMVLRNHPQPLHGSFCVS*VMRVGI Trigger: TATCCCCACTCTCATCACGCAGCTCACACAGAAGCT...ACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCCATGCTTCTGTGTCTaGGCTTTTGATGCCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGPCSEVHMVLRNHPQPLPCFCV*AFDAKD Trigger: ATCTTTGGCATCAAAAGCCCAGACACAGAAGCATGG...CAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | CCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTGCTTGCGTGATTCCATaGTTCTGTGTCTGGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PCSEVHMVLRNHPQPLHGACVIP*FCVWAF Trigger: AAAAGCCCAGACACAGAAGCATGGAATCACGCAAGC...ACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| 3UTR CAA 72 bp | GAGTTTGTGACAAGTTCAAGAGGTTGGAAACCTGTGTaGCTTCAGCAGGGCCGTGCTCAGAAGTCCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: EFVTSSRGWKPV*LQQGRAQKSTW Trigger: CCATGTGGACTTCTGAGCACGGCCCTGCTGAAGCAACACAGGTTTCCAACCTCTTGAACTTGTCACAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| 3UTR CAA 72 bp | CGTGATGAGAGTGGGGATATAGGGGATGATGGCCTCTaGCAGGAGGGAGAAACTTCTCATGATAGAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDESGDIGDDGL*QEGETSHDREW Trigger: CCACTCTCTATCATGAGAAGTTTCTCCCTCCTGCAAGAGGCCATCATCCCCTATATCCCCACTCTCATCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR TCA 90 bp | CCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTTGGCCTTTCACAAACTaGAGCCAGAAACTGAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCSEVHMVLRNHPQPLHGWPFTN*SQKLNC Trigger: GCAATTCAGTTTCTGGCTTCAGTTTGTGAAAGGCCA...ACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGAATCTGCTCTGGACTaGTCAGCATCAGATGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: CFSRAVLRSPHGSKKPSSESALD*SASDAL Trigger: TAGTGCATCTGATGCTGAGCAGTCCAGAGCAGATTC...TGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGCCTCGTTCTAAGAATGCCTGGAGCAGCCTCACTAGAGCAGGGATGTTTCGCTTGCGTGATTCCATaGTTCTGTGTCTGGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLVLRMPGAASLEQGCFACVIP*FCVWAF Trigger: AAAAGCCCAGACACAGAAGCATGGAATCACGCAAGC...GAAACATCCCTGCTCTAGTGAGGCTGCTCCAGGCATTCTTAGAACGAGGCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCACCTTGGTGATCGTTTaGCTTGGATGCAATCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSRAVLRSPHGSKKPSSATLVIV*LGCNQL Trigger: AAGCTGATTGCATCCAAGGCAAACGATCACCAAGGT...GGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | AGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGTGGTCTTGGAGTTTTaGAGTCTCTGGAATAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRAVLRSPHGSKKPSSAAVVLEF*SLWNSR Trigger: TCTACTATTCCAGAGACTGCAAAACTCCAAGACCAC...AGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | CCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTGATGCAATCAGCTTCTaGAAGACACCCAGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCSEVHMVLRNHPQPLHGDAISF*KTPSNP Trigger: TGGATTACTGGGTGTCTTCCAGAAGCTGATTGCATC...ACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | GCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGGTTCGATTATACTGTTaGGAAGATAGAAACCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPCSEVHMVLRNHPQPLVRLYC*EDRNLG Trigger: ACCAAGGTTTCTATCTTCTCAACAGTATAATCGAAC...CAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | GCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGTCTGGAATAGTAGAATaGAGATCTGCTTCCTATACT | + |
|
Preference number: 4 (lower is better) Translates to: AGPCSEVHMVLRNHPQPLSGIVE*RSASYT Trigger: AGTATAGGAAGCAGATCTTCATTCTACTATTCCAGA...CAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | CCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTAAACGGTGCGATTTCTaGAGCTGTAAAAAGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PCSEVHMVLRNHPQPLHGKRCDF*SCKKSG Trigger: ACCACTCTTTTTACAGCTGCAGAAATCGCACCGTTT...ACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | AGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTAATCTCAACAAACGGTaGGATTTCTGCAGCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRAVLRSPHGSKKPSSAANLNKR*DFCSCK Trigger: TTTACAGCTGCAGAAATCGCACCGTTTGTTGAGATT...AGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | TGCTTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAATCGTTTGCCTTGGATaGAATCAGCTTCTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CFSRAVLRSPHGSKKPSSIVCLG*NQLLED Trigger: GTCTTCCAGAAGCTGATTGCATCCAAGGCAAACGAT...TGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | TTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCCTTGTCAGCGTGTTCTaGTCCTCAAACAGATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FSRAVLRSPHGSKKPSSALVSVF*SSNRFL Trigger: TAAGAATCTGTTTGAGGACCAGAACACGCTGACAAG...GGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCATGTGAGAAGGCAGTCTaGTATCCTGGTGTATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFSRAVLRSPHGSKKPSSCEKAV*YPGVSS Trigger: AGAAGATACACCAGGATACCAGACTGCCTTCTCACA...TGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| 3UTR CAA 72 bp | CAGGAATTTTGTCAGCTGCAGCAGTTGCTATTGTACTaGAGCCTCGTTCTAAGAATGCCTGGAGCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEFCQLQQLLLY*SLVLRMPGAAS Trigger: TGAGGCTGCTCCAGGCATTCTTAGAACGAGGCTCAAGTACAATAGCAACTGCTGCAGCTGACAAAATTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
||
| CDS-3UTR TCA 90 bp | CCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTAGTGTCAGGAGGGTATaGAAATTGTTCATCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCSEVHMVLRNHPQPLHGSVRRV*KLFIQV Trigger: AACTTGGATGAACAATTTTCATACCCTCCTGACACT...ACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCTATTGTACTTGAGCCTCGTTCTAAGAATGCCTGGAGCAGCCTCACTAGACTGTGTCTGGGCTTTTaGTGCCAAAGATGTGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAIVLEPRSKNAWSSLTRLCLGF*CQRCDK Trigger: CTTGTCACATCTTTGGCATCAAAAGCCCAGACACAG...TCTAGTGAGGCTGCTCCAGGCATTCTTAGAACGAGGCTCAAGTACAATAGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR TCA 90 bp | CAAACCGTGCAAATGTTCAACAGAGACCATGGCCATACATGGGATTGTAAATACTCCCACAGTACTGGCTaGAGGAGGTGGGGAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTVQMFNRDHGHTWDCKYSHSTG*RRWGNK Trigger: CTTGTTTCCCCACCTCCTTCAGCCAGTACTGTGGGA...GTATTTACAATCCCATGTATGGCCATGGTCTCTGTTGAACATTTGCACGGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | TGCTTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCATTGGTGGACACTCTGTaGGTAATTTGGTTATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CFSRAVLRSPHGSKKPSSLVDTL*VIWLCQ Trigger: TTGGCATAACCAAATTACTCACAGAGTGTCCACCAA...TGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | CCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTATTCAAACAGGCCAATaGGAGATTGTAACAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCSEVHMVLRNHPQPLHGIQTGQ*EIVTKE Trigger: CTCCTTTGTTACAATCTCTCATTGGCCTGTTTGAAT...ACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | CCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCTGCTCAGCATCAGATaGACTATGTTGGCTTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: PCSEVHMVLRNHPQPLHGLLSIR*TMLALI Trigger: TATTAAAGCCAACATAGTGCATCTGATGCTGAGCAG...ACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | CCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTAGGAATTTTGTCAGCTaGAGCAGTTGCTATTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PCSEVHMVLRNHPQPLHGRNFVS*SSCYCT Trigger: AGTACAATAGCAACTGCTGCAGCTGACAAAATTCCT...ACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGAGTTTTGCAGTCTCTaGAATAGTAGAATGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SRAVLRSPHGSKKPSSAAEFCSL*NSRMKI Trigger: GATCTTCATTCTACTATTCCAGAGACTGCAAAACTC...AGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCAGGAAGATGTGCCAGATGGATTTTaGGGTTGTTTACCATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EVHMVLRNHPQPLHGQEDVPDGF*GCLPSD Trigger: GTCAGATGGTAAACAACCCCAAAATCCATCTGGCAC...ATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCAGGAAGATAGTGACTGTGCCAGATaGATTTTGGGGTTGTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: EVHMVLRNHPQPLHGQEDSDCAR*ILGLFT Trigger: GGTAAACAACCCCAAAATCCATCTGGCACAGTCACT...ATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | CAAACCGTGCAAATGTTCAACAGAGACCATGGCCATACATGGGATTGTAAATACAGCAAATGCCAGCTGTaGGAAGGCAGTCTGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QTVQMFNRDHGHTWDCKYSKCQL*EGSLVS Trigger: GGATACCAGACTGCCTTCTCACAGCTGGCATTTGCT...GTATTTACAATCCCATGTATGGCCATGGTCTCTGTTGAACATTTGCACGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | CAAACCGTGCAAATGTTCAACAGAGACCATGGCCATACATGGGATTGTAAATACGGGATGATGGCCTCTTaGAGGAGGGAGAAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTVQMFNRDHGHTWDCKYGMMAS*RREKLL Trigger: GAGAAGTTTCTCCCTCCTGCAAGAGGCCATCATCCC...GTATTTACAATCCCATGTATGGCCATGGTCTCTGTTGAACATTTGCACGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | GCTGAAGGAGGTGGGGAAACAAGGCCATATAGGAAGACGGGATATCATTTTTATGAATCTGCTCTGGACTaGTCAGCATCAGATGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: AEGGGETRPYRKTGYHFYESALD*SASDAL Trigger: TAGTGCATCTGATGCTGAGCAGTCCAGAGCAGATTC...ATAAAAATGATATCCCGTCTTCCTATATGGCCTTGTTTCCCCACCTCCTTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | GCAATCAGCTTCTGGAAGACACCCAGTAATCCAGGAATTTTGTCAGCTGCAGCAAAACGGTGCGATTTCTaGAGCTGTAAAAAGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AISFWKTPSNPGILSAAAKRCDF*SCKKSG Trigger: ACCACTCTTTTTACAGCTGCAGAAATCGCACCGTTT...TGCTGCAGCTGACAAAATTCCTGGATTACTGGGTGTCTTCCAGAAGCTGATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164974.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACCTTGGTGATCGTTTGCCTTGGATGCAATCAGCTTCTGGAAGACACCCACTTGTCAGCGTGTTCTaGTCCTCAAACAGATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RNLGDRLPWMQSASGRHPLVSVF*SSNRFL Trigger: TAAGAATCTGTTTGAGGACCAGAACACGCTGACAAG...TGGGTGTCTTCCAGAAGCTGATTGCATCCAAGGCAAACGATCACCAAGGTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| 3UTR CAA 72 bp | CACCCAGTAATCCAGGAATTTTGTCAGCTGCAGCAGTaGCTATTGTACTTGAGCCTCGTTCTAAGAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPVIQEFCQLQQ*LLYLSLVLRMP Trigger: AGGCATTCTTAGAACGAGGCTCAAGTACAATAGCAACTGCTGCAGCTGACAAAATTCCTGGATTACTGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCAGGAAGATAATATATTCATTTTCTaGAGAGCCAGGAAGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVHMVLRNHPQPLHGQEDNIFIF*RARKCE Trigger: CTCACACTTCCTGGCTCTTCAGAAAATGAATATATT...ATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | CAAACCGTGCAAATGTTCAACAGAGACCATGGCCATACATGGGATTGTAAATACGGTGATCGTTTGCCTTaGATGCAATCAGCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTVQMFNRDHGHTWDCKYGDRLP*MQSASG Trigger: TCCAGAAGCTGATTGCATCCAAGGCAAACGATCACC...GTATTTACAATCCCATGTATGGCCATGGTCTCTGTTGAACATTTGCACGGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | CCCAGTAATCCAGGAATTTTGTCAGCTGCAGCAGTTGCTATTGTACTTGAGCCTAGTGTCAGGAGGGTATaGAAATTGTTCATCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSNPGILSAAAVAIVLEPSVRRV*KLFIQV Trigger: AACTTGGATGAACAATTTTCATACCCTCCTGACACT...AGGCTCAAGTACAATAGCAACTGCTGCAGCTGACAAAATTCCTGGATTACTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR TCA 90 bp | GCAATCAGCTTCTGGAAGACACCCAGTAATCCAGGAATTTTGTCAGCTGCAGCAAATATATTCATTTTCTaGAGAGCCAGGAAGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AISFWKTPSNPGILSAAANIFIF*RARKCE Trigger: CTCACACTTCCTGGCTCTTCAGAAAATGAATATATT...TGCTGCAGCTGACAAAATTCCTGGATTACTGGGTGTCTTCCAGAAGCTGATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164974.2 |
||
| CDS-3UTR CCA 90 bp | CAAACCGTGCAAATGTTCAACAGAGACCATGGCCATACATGGGATTGTAAATACATCTGCTTCCTATACTaGTCAACTGATTCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVQMFNRDHGHTWDCKYICFLY*STDSGG Trigger: GCCTCCTGAATCAGTTGACCAGTATAGGAAGCAGAT...GTATTTACAATCCCATGTATGGCCATGGTCTCTGTTGAACATTTGCACGGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | GCCTTGGATGCAATCAGCTTCTGGAAGACACCCAGTAATCCAGGAATTTTGTCAGTTCTTGAAGGTTACTaGAGCACATACTTTAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALDAISFWKTPSNPGILSVLEGY*STYFND Trigger: GTCATTAAAGTATGTGCTTCAGTAACCTTCAAGAAC...TGACAAAATTCCTGGATTACTGGGTGTCTTCCAGAAGCTGATTGCATCCAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR TCA 90 bp | CAAACCGTGCAAATGTTCAACAGAGACCATGGCCATACATGGGATTGTAAATACACTGAAGCCAGAAACTaGATTGCATTGCTAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QTVQMFNRDHGHTWDCKYTEARN*IALLTN Trigger: GTTGGTTAGCAATGCAATTCAGTTTCTGGCTTCAGT...GTATTTACAATCCCATGTATGGCCATGGTCTCTGTTGAACATTTGCACGGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | CTGATTACAGACTTTAACTACGAAATGTGCATTGCAAGTCAACAAGACTTTTTCGGCAGAGGCGTCATTTaGATGGGTACTGCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LITDFNYEMCIASQQDFFGRGVI*MGTAQF Trigger: GAACTGTGCAGTACCCATGCAAATGACGCCTCTGCC...GAAAAAGTCTTGTTGACTTGCAATGCACATTTCGTAGTTAAAGTCTGTAATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | GGGATAAACTCTTGTACATCATTTTGTAAGATCTCAGTGAACACTAGAAACAGAGGCAGAGGCGTCATTTaGATGGGTACTGCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GINSCTSFCKISVNTRNRGRGVI*MGTAQF Trigger: GAACTGTGCAGTACCCATGCAAATGACGCCTCTGCC...TCTGTTTCTAGTGTTCACTGAGATCTTACAAAATGATGTACAAGAGTTTATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCTTCATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACAACAACAGGGTCACACTaGCTGCCTGCAGGTAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KFFISSKFQKAPNPVLKTTTGSH*LPAGNL Trigger: AAGGTTACCTGCAGGCAGCCAGTGTGACCCTGTTGT...TGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAATGAAGAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| 3UTR CAA 72 bp | GCCTCCTCAAAATTCACAACAGCAGCAGGGTTAGCTTaGCAGGTTATTCTTATAGACAAGCATATTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSKFTTAAGLA*QVILIDKHIAS Trigger: TGAAGCAATATGCTTGTCTATAAGAATAACCTGCAAAGCTAACCCTGCTGCTGTTGTGAATTTTGAGGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
||
| 3UTR CAA 72 bp | CATGTGTTCGATTATACTGTTGAGAAGATAGAAACCTaGGTGATCGTTTGCCTTGGATGCAATCAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HVFDYTVEKIET*VIVCLGCNQLL Trigger: CAGAAGCTGATTGCATCCAAGGCAAACGATCACCAAGGTTTCTATCTTCTCAACAGTATAATCGAACACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164974.2 ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | CAAACCGTGCAAATGTTCAACAGAGACCATGGCCATACATGGGATTGTAAATACCTGCTCAGCATCAGATaGACTATGTTGGCTTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: QTVQMFNRDHGHTWDCKYLLSIR*TMLALI Trigger: TATTAAAGCCAACATAGTGCATCTGATGCTGAGCAG...GTATTTACAATCCCATGTATGGCCATGGTCTCTGTTGAACATTTGCACGGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGAATGAAGATCTGCTTCCTATACTGGTCAACTGATTCAGGAGGCATGTGTAATCTCAACAAACGGTaGGATTTCTGCAGCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRMKICFLYWSTDSGGMCNLNKR*DFCSCK Trigger: TTTACAGCTGCAGAAATCGCACCGTTTGTTGAGATT...ACACATGCCTCCTGAATCAGTTGACCAGTATAGGAAGCAGATCTTCATTCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164974.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACACTTTTAGATCGTTCTAAGAATGCCTaGAGCAGCCTCACTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISSKFQKAPNPVLKTLLDRSKNA*SSLTRA Trigger: TGCTCTAGTGAGGCTGCTCCAGGCATTCTTAGAACG...ATCTAAAAGTGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | CTGATTACAGACTTTAACTACGAAATGTGCATTGCAAGTCAACAAGACTTTTTCCTGTGTCTGGGCTTTTaGTGCCAAAGATGTGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LITDFNYEMCIASQQDFFLCLGF*CQRCDK Trigger: CTTGTCACATCTTTGGCATCAAAAGCCCAGACACAG...GAAAAAGTCTTGTTGACTTGCAATGCACATTTCGTAGTTAAAGTCTGTAATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | CTGATTACAGACTTTAACTACGAAATGTGCATTGCAAGTCAACAAGACTTTTTCGGGTTGTTTACCATCTaGCCTACAGGATCATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LITDFNYEMCIASQQDFFGLFTI*PTGSCS Trigger: GGAACATGATCCTGTAGGTCAGATGGTAAACAACCC...GAAAAAGTCTTGTTGACTTGCAATGCACATTTCGTAGTTAAAGTCTGTAATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | CAAGTTATCAGTTATATTGATGATCAAGACAAACAACCTCATTGGCTTACAGCACATTTGCATGGGTACTaGACAGTTCAATGGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVISYIDDQDKQPHWLTAHLHGY*TVQWWP Trigger: AGGCCACCATTGAACTGTGCAGTACCCATGCAAATG...TGCTGTAAGCCAATGAGGTTGTTTGTCTTGATCATCAATATAACTGATAACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR TCA 90 bp | AAATTCTTCATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACATGGCCTTTCACAAACTaGAGCCAGAAACTGAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KFFISSKFQKAPNPVLKTWPFTN*SQKLNC Trigger: GCAATTCAGTTTCTGGCTTCAGTTTGTGAAAGGCCA...TGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAATGAAGAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | AAATTCTTCATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACAACAAGTTCATTGGCTTaGGTGATTCCATGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KFFISSKFQKAPNPVLKTTSSLA*VIPCFC Trigger: ACAGAAGCATGGAATCACGCAAGCCAATGAACTTGT...TGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAATGAAGAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CCA 90 bp | AAATTCTTCATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACAGGCAGTCTGGTATCCTaGTGTATCTTCTATGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KFFISSKFQKAPNPVLKTGSLVS*CIFYVN Trigger: ATTGACATAGAAGATACACCAGGATACCAGACTGCC...TGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAATGAAGAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | CAAGTTATCAGTTATATTGATGATCAAGACAAACAACCTCATTGGCTTACAGCAGCTCTTCATCAGGAATaGTGTCATCTTCAGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: QVISYIDDQDKQPHWLTAALHQE*CHLQVI Trigger: AATTACCTGAAGATGACAGCATTCCTGATGAAGAGC...TGCTGTAAGCCAATGAGGTTGTTTGTCTTGATCATCAATATAACTGATAACTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | CTGATTACAGACTTTAACTACGAAATGTGCATTGCAAGTCAACAAGACTTTTTCGTTCTTGAAGGTTACTaGAGCACATACTTTAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LITDFNYEMCIASQQDFFVLEGY*STYFND Trigger: GTCATTAAAGTATGTGCTTCAGTAACCTTCAAGAAC...GAAAAAGTCTTGTTGACTTGCAATGCACATTTCGTAGTTAAAGTCTGTAATCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR TCA 90 bp | CTGATTACAGACTTTAACTACGAAATGTGCATTGCAAGTCAACAAGACTTTTTCCAAACATGTAGTGATTaGAATGAGGTTTACTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LITDFNYEMCIASQQDFFQTCSD*NEVYWD Trigger: ATCCCAGTAAACCTCATTTCAATCACTACATGTTTG...GAAAAAGTCTTGTTGACTTGCAATGCACATTTCGTAGTTAAAGTCTGTAATCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | CTGATTACAGACTTTAACTACGAAATGTGCATTGCAAGTCAACAAGACTTTTTCAGTAGAATGAAGATCTaGTTCCTATACTGGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LITDFNYEMCIASQQDFFSRMKI*FLYWST Trigger: AGTTGACCAGTATAGGAAGCAGATCTTCATTCTACT...GAAAAAGTCTTGTTGACTTGCAATGCACATTTCGTAGTTAAAGTCTGTAATCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR GCA 90 bp | ATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACACTTTTAGATTCTATGTCAATGAAATaGTCTTCATCAGGAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISSKFQKAPNPVLKTLLDSMSMK*SSSGML Trigger: CAGCATTCCTGATGAAGAGCATTTCATTGACATAGA...ATCTAAAAGTGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| 3UTR CAA 72 bp | CCCATTAAGGACAAAGTAGACAAGTTATCAGTTATATaGATGATCAAGACAAACAACCTCATTGGCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PIKDKVDKLSVI*MIKTNNLIGLQ Trigger: CTGTAAGCCAATGAGGTTGTTTGTCTTGATCATCAATATAACTGATAACTTGTCTACTTTGTCCTTAATGGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| 3UTR CAA 72 bp | ATAAACACTAAGAAACTCTTGATAAACTTGGTGGTCTaGGAGTTTTGCAGTCTCTGGAATAGTAGAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: INTKKLLINLVV*EFCSLWNSRMK Trigger: CTTCATTCTACTATTCCAGAGACTGCAAAACTCCAAGACCACCAAGTTTATCAAGAGTTTCTTAGTGTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTTGCAAGGCTTCTGCATaGAGGCTGGTGCTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: SRAVLRSPHGSKKPSSAACKASA*RLVLTI Trigger: GATGGTGAGCACCAGCCTCAATGCAGAAGCCTTGCA...AGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGGGCAGAGGCGTCATTaGCATGGGTACTGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CFSRAVLRSPHGSKKPSSGQRRH*HGYCTV Trigger: AACTGTGCAGTACCCATGCAAATGACGCCTCTGCCC...TGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCAGGAAGATGGGGATGATGGCCTCTaGCAGGAGGGAGAAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EVHMVLRNHPQPLHGQEDGDDGL*QEGETS Trigger: AGAAGTTTCTCCCTCCTGCAAGAGGCCATCATCCCC...ATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTCTGCAGCAGTTGCTATaGTACTTGAGCCTCGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SRAVLRSPHGSKKPSSAALQQLL*YLSLVL Trigger: TAGAACGAGGCTCAAGTACAATAGCAACTGCTGCAG...AGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCACTCTGTGAGTAATTaGGTTATGCCAACTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AGPCSEVHMVLRNHPQPLHSVSN*VMPTAQ Trigger: CTGTGCAGTTGGCATAACCAAATTACTCACAGAGTG...CAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CAA 90 bp | TTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCCTTTTTCACAGATACTaGTCAGCGTGTTCTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSRAVLRSPHGSKKPSSALFHRY*SACSGP Trigger: AGGACCAGAACACGCTGACAAGTATCTGTGAAAAAG...GGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
||
| CDS TCA 90 bp | AGAATCTCAACAAACGGTGCGATTTCTGCAGTCTCAGCCTCCAGGTaGCTGATCAAGAGGGGAATAGAGACTAGGAGGTGCTCTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RISTNGAISAVSASR*LIKRGIETRRCSFG Trigger: ACCAAAAGAGCACCTCCTAGTCTCTATTCCCCTCTTGATCAGTCACCTGGAGGCTGAGACTGCAGAAATCGCACCGTTTGTTGAGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163437.2 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCAGGAAGATTACAAGTTCATTGGCTaGCGTGATTCCATGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVHMVLRNHPQPLHGQEDYKFIG*RDSMLL Trigger: CAGAAGCATGGAATCACGCAAGCCAATGAACTTGTA...ATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CAA 90 bp | TTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGTAAAAAGAGTGGTATaGTTTGACCCTCTCATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSRAVLRSPHGSKKPSSAVKRVV*FDPLIV Trigger: CACTATGAGAGGGTCAAACAATACCACTCTTTTTAC...GGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCAGGAAGATATAAACTTGGTGGTCTaGGAGTTTTGCAGTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EVHMVLRNHPQPLHGQEDINLVV*EFCSLW Trigger: CCAGAGACTGCAAAACTCCAAGACCACCAAGTTTAT...ATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGCTGCATGGTCAGGAAGATTTCCAGGACAAGCAGTaGACAGTTTGTGAAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EVHMVLRNHPQPLHGQEDFQDKQ*TVCEVT Trigger: AGTCACTTCACAAACTGTCAACTGCTTGTCCTGGAA...ATCTTCCTGACCATGCAGCGGCTGAGGATGGTTTCTTAGAACCATGTGGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS-3UTR CAA 90 bp | CCAGTAATCCAGGAATTTTGTCAGCTGCAGCAGTTGCTATTGTACTTGAGCCTCCACAGCTCATTTGACTaGAACTCATGCCGGTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: PVIQEFCQLQQLLLYLSLHSSFD*NSCRYL Trigger: GAGATACCGGCATGAGTTCAAGTCAAATGAGCTGTG...GAGGCTCAAGTACAATAGCAACTGCTGCAGCTGACAAAATTCCTGGATTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGCAGGGCCGTGCTCAGAAGTCCACATGGTTCTAAGAAACCATCCTCAGCCGTTCCCAGATACCTTTaGAATCTCTGGAATAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: FSRAVLRSPHGSKKPSSAVPRYL*NLWNND Trigger: ATCATTATTCCAGAGATTCAAAAGGTATCTGGGAAC...GGCTGAGGATGGTTTCTTAGAACCATGTGGACTTCTGAGCACGGCCCTGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
||
| CDS TCA 90 bp | AACAAACGGTGCGATTTCTGCAGCTGTAAAAAGAGTGGTATTGTTTaGCCCTCTCATAGTGAACAGCCTTTCGAGAGCATGTGCGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: NKRCDFCSCKKSGIV*PSHSEQPFESMCGI Trigger: TATGCCGCACATGCTCTCGAAAGGCTGTTCACTATGAGAGGGTCAAACAATACCACTCTTTTTACAGCTGCAGAAATCGCACCGTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000164974.2 ENSMUST00000168599.8 |
||
| CDS CCA 90 bp | GCCAATGATGCTAATAGCATCACTCAGCTGCTTCTGAATCTGCTCTaGACTGCTCAGCATCAGATGCACTATGTTGGCTTTAATAGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ANDANSITQLLLNLL*TAQHQMHYVGFNSY Trigger: GTAGCTATTAAAGCCAACATAGTGCATCTGATGCTGAGCAGTCCAGAGCAGATTCAGAAGCAGCTGAGTGATGCTATTAGCATCATTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000168599.8 ENSMUST00000169290.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAATCAGCTTCTGGAAGACACCCAGTAATCCAGGAATTTTGTCAGCTGCAGGTAAAAAGAGTGGTATaGTTTGACCCTCTCATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MQSASGRHPVIQEFCQLQVKRVV*FDPLIV Trigger: CACTATGAGAGGGTCAAACAATACCACTCTTTTTAC...CTGCAGCTGACAAAATTCCTGGATTACTGGGTGTCTTCCAGAAGCTGATTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164974.2 |
||
| CDS-3UTR CAA 90 bp | CAAACCGTGCAAATGTTCAACAGAGACCATGGCCATACATGGGATTGTAAATACAGTAATCCAGGAATTTaGTCAGCTGCAGCAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTVQMFNRDHGHTWDCKYSNPGI*SAAAVA Trigger: AGCAACTGCTGCAGCTGACAAAATTCCTGGATTACT...GTATTTACAATCCCATGTATGGCCATGGTCTCTGTTGAACATTTGCACGGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS GCA 90 bp | AAGACAAGTTTAATTTCAGTCCACAGCTCATTTGACTTGAACTCATaGCGGTATCTCTTAAATAGTGAGTGCGCTGTACGAAGGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: KTSLISVHSSFDLNS*RYLLNSECAVRRTP Trigger: TGGAGTCCTTCGTACAGCGCACTCACTATTTAAGAGATACCGGCATGAGTTCAAGTCAAATGAGCTGTGGACTGAAATTAAACTTGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000168599.8 ENSMUST00000169290.8 |
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| CDS-3UTR CAA 90 bp | AAATTCTTCATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACATGCCTGCAGGTAACCTaGGAGATACTGCAAGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: KFFISSKFQKAPNPVLKTCLQVT*EILQGF Trigger: GAAGCCTTGCAGTATCTCCAAGGTTACCTGCAGGCA...TGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAATGAAGAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS-3UTR CAA 90 bp | GCAGCAGGGTTAGCTTTGCAGGTTATTCTTATAGACAAGCATATTGCTTCAAACGGAAGTGTGAGAGCTTaGAAAAGGTTTGTTAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: AAGLALQVILIDKHIASNGSVRA*KRFVSR Trigger: TCTGCTAACAAACCTTTTCAAAGCTCTCACACTTCC...GTTTGAAGCAATATGCTTGTCTATAAGAATAACCTGCAAAGCTAACCCTGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164974.2 |
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| CDS-3UTR CAA 90 bp | AAATTCTTCATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACATGTCAGCTGCAGCAGTaGCTATTGTACTTGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: KFFISSKFQKAPNPVLKTCQLQQ*LLYLSL Trigger: GAGGCTCAAGTACAATAGCAACTGCTGCAGCTGACA...TGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAATGAAGAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS TCA 90 bp | GTTCTGGTCCTCAAACAGATTCTTATAATGTGGCCTTTCACAAACTaGAGCCAGAAACTGAATTGCATTGCTAACCAAATCAGTCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: VLVLKQILIMWPFTN*SQKLNCIANQISLQ Trigger: TTGCAGACTGATTTGGTTAGCAATGCAATTCAGTTTCTGGCTTCAGTTTGTGAAAGGCCACATTATAAGAATCTGTTTGAGGACCAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168599.8 |
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| CDS-3UTR CAA 90 bp | CTGATTACAGACTTTAACTACGAAATGTGCATTGCAAGTCAACAAGACTTTTTCCACAGCTCATTTGACTaGAACTCATGCCGGTATCTC | + |
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Preference number: 5 (lower is better) Translates to: LITDFNYEMCIASQQDFFHSSFD*NSCRYL Trigger: GAGATACCGGCATGAGTTCAAGTCAAATGAGCTGTG...GAAAAAGTCTTGTTGACTTGCAATGCACATTTCGTAGTTAAAGTCTGTAATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS-3UTR CAA 90 bp | ATTCACAACAGCAGCAGGGTTAGCTTTGCAGGTTATTCTTATAGACAAGCATATATCAGATGCACTATGTaGGCTTTAATAGCTACTCGA | + |
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Preference number: 5 (lower is better) Translates to: IHNSSRVSFAGYSYRQAYIRCTM*ALIATR Trigger: TCGAGTAGCTATTAAAGCCAACATAGTGCATCTGAT...ATATGCTTGTCTATAAGAATAACCTGCAAAGCTAACCCTGCTGCTGTTGTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169290.8 |
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| CDS-3UTR CAA 90 bp | CTGATTACAGACTTTAACTACGAAATGTGCATTGCAAGTCAACAAGACTTTTTCCTTTTTCACAGATACTaGTCAGCGTGTTCTGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LITDFNYEMCIASQQDFFLFHRY*SACSGP Trigger: AGGACCAGAACACGCTGACAAGTATCTGTGAAAAAG...GAAAAAGTCTTGTTGACTTGCAATGCACATTTCGTAGTTAAAGTCTGTAATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS-3UTR CAA 90 bp | CAAGTTATCAGTTATATTGATGATCAAGACAAACAACCTCATTGGCTTACAGCAAGGTTTACAAGTTCATaGGCTTGCGTGATTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: QVISYIDDQDKQPHWLTARFTSS*ACVIPC Trigger: GCATGGAATCACGCAAGCCAATGAACTTGTAAACCT...TGCTGTAAGCCAATGAGGTTGTTTGTCTTGATCATCAATATAACTGATAACTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS-3UTR CAA 90 bp | CTGATTACAGACTTTAACTACGAAATGTGCATTGCAAGTCAACAAGACTTTTTCGCAGCAGGGTTAGCTTaGCAGGTTATTCTTATAGAC | + |
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Preference number: 5 (lower is better) Translates to: LITDFNYEMCIASQQDFFAAGLA*QVILID Trigger: GTCTATAAGAATAACCTGCAAAGCTAACCCTGCTGC...GAAAAAGTCTTGTTGACTTGCAATGCACATTTCGTAGTTAAAGTCTGTAATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS TCA 90 bp | GTTCTGGTCCTCAAACAGATTCTTATAATGTGGCCTTTCACAAACTaGAGCCAGAAACTGAATTGCATTGCTAACCAACAAGTCATATTT | + |
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Preference number: 5 (lower is better) Translates to: VLVLKQILIMWPFTN*SQKLNCIANQQVIF Trigger: AAATATGACTTGTTGGTTAGCAATGCAATTCAGTTTCTGGCTTCAGTTTGTGAAAGGCCACATTATAAGAATCTGTTTGAGGACCAGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000163437.2 ENSMUST00000169290.8 |
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| CDS-3UTR CAA 90 bp | AAATTCTTCATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACAGGAAGTGTGAGAGCTTaGAAAAGGTTTGTTAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: KFFISSKFQKAPNPVLKTGSVRA*KRFVSR Trigger: TCTGCTAACAAACCTTTTCAAAGCTCTCACACTTCC...TGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAATGAAGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS-3UTR CAA 90 bp | ATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACACTTTTAGATCAGTTGCTATTGTACTaGAGCCTCGTTCTAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: ISSKFQKAPNPVLKTLLDQLLLY*SLVLRM Trigger: CATTCTTAGAACGAGGCTCAAGTACAATAGCAACTG...ATCTAAAAGTGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS-3UTR CAA 90 bp | AAATTCTTCATTTCATCAAAGTTTCAGAAAGCACCAAATCCTGTCCTGAAGACAATCAGATGCACTATGTaGGCTTTAATAGCTACTCGA | + |
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Preference number: 5 (lower is better) Translates to: KFFISSKFQKAPNPVLKTIRCTM*ALIATR Trigger: TCGAGTAGCTATTAAAGCCAACATAGTGCATCTGAT...TGTCTTCAGGACAGGATTTGGTGCTTTCTGAAACTTTGATGAAATGAAGAATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002790.14 |
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| CDS TCA 90 bp | TCATCATCAGTCTGCAAGAGCTTATTATCCAGTGTCAGGAGGGTATaGAAATTGTTCATCCAAGTTTCCATATTATCTTCAAAGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: SSSVCKSLLSSVRRV*KLFIQVSILSSKNS Trigger: TGAATTCTTTGAAGATAATATGGAAACTTGGATGAACAATTTTCATACCCTCCTGACACTGGATAATAAGCTCTTGCAGACTGATGATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002790.14 ENSMUST00000169290.8 |
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| CDS TCA 90 bp | ACCAAATCAGTCTGCAAGAGCTTATTATCCAGTGTCAGGAGGGTATaGAAATTGTTCATCCAAGTTTCCATATTATCTTCAAAGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: TKSVCKSLLSSVRRV*KLFIQVSILSSKNS Trigger: TGAATTCTTTGAAGATAATATGGAAACTTGGATGAACAATTTTCATACCCTCCTGACACTGGATAATAAGCTCTTGCAGACTGATTTGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168599.8 |
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| CDS TCA 72 bp | ACAAACGGTGCGATTTCTGCAGTCTCAGCCTCCAGGTaGCTGATCAAGAGGGGAATAGAGACTAGGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: TNGAISAVSASR*LIKRGIETRRC Trigger: GCACCTCCTAGTCTCTATTCCCCTCTTGATCAGTCACCTGGAGGCTGAGACTGCAGAAATCGCACCGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163437.2 |
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| CDS CCA 72 bp | GCTAATAGCATCACTCAGCTGCTTCTGAATCTGCTCTaGACTGCTCAGCATCAGATGCACTATGTTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ANSITQLLLNLL*TAQHQMHYVGF Trigger: AAAGCCAACATAGTGCATCTGATGCTGAGCAGTCCAGAGCAGATTCAGAAGCAGCTGAGTGATGCTATTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000168599.8 ENSMUST00000169290.8 |
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| CDS CAA 90 bp | ATCTCAACAAACGGTGCGATTTCTGCAGCTGTAAAAAGAGTGGTATaGTTTGACCCTCTCATAGTGAACAGCCTTTCGAGAGCATGTGCG | + |
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Preference number: 6 (lower is better) Translates to: ISTNGAISAAVKRVV*FDPLIVNSLSRACA Trigger: CGCACATGCTCTCGAAAGGCTGTTCACTATGAGAGGGTCAAACAATACCACTCTTTTTACAGCTGCAGAAATCGCACCGTTTGTTGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000164974.2 ENSMUST00000168599.8 |
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| CDS TCA 72 bp | TGCGATTTCTGCAGCTGTAAAAAGAGTGGTATTGTTTaGCCCTCTCATAGTGAACAGCCTTTCGAGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: CDFCSCKKSGIV*PSHSEQPFESM Trigger: CATGCTCTCGAAAGGCTGTTCACTATGAGAGGGTCAAACAATACCACTCTTTTTACAGCTGCAGAAATCGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000164974.2 ENSMUST00000168599.8 |
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| CDS CAA 72 bp | ATCTGCTCTGGACTGCTCAGCATCAGATGCACTATGTaGGCTTTAATAGCTACTCGATCAGCTTCGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: ICSGLLSIRCTM*ALIATRSASQI Trigger: AATTTGCGAAGCTGATCGAGTAGCTATTAAAGCCAACATAGTGCATCTGATGCTGAGCAGTCCAGAGCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000168599.8 ENSMUST00000169290.8 |
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| CDS CAA 72 bp | AACGGTGCGATTTCTGCAGCTGTAAAAAGAGTGGTATaGTTTGACCCTCTCATAGTGAACAGCCTTTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: NGAISAAVKRVV*FDPLIVNSLSR Trigger: TCTCGAAAGGCTGTTCACTATGAGAGGGTCAAACAATACCACTCTTTTTACAGCTGCAGAAATCGCACCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000164974.2 ENSMUST00000168599.8 |
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| CDS CAA 90 bp | AAGGCATCCAAGACAAGTTTAATTTCAGTCCACAGCTCATTTGACTaGAACTCATGCCGGTATCTCTTAAATAGTGAGTGCGCTGTACGA | + |
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Preference number: 6 (lower is better) Translates to: KASKTSLISVHSSFD*NSCRYLLNSECAVR Trigger: TCGTACAGCGCACTCACTATTTAAGAGATACCGGCATGAGTTCAAGTCAAATGAGCTGTGGACTGAAATTAAACTTGTCTTGGATGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000168599.8 ENSMUST00000169290.8 |
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| CDS GCA 72 bp | TTAATTTCAGTCCACAGCTCATTTGACTTGAACTCATaGCGGTATCTCTTAAATAGTGAGTGCGCTGTACGA | + |
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Preference number: 6 (lower is better) Translates to: LISVHSSFDLNS*RYLLNSECAVR Trigger: TCGTACAGCGCACTCACTATTTAAGAGATACCGGCATGAGTTCAAGTCAAATGAGCTGTGGACTGAAATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000168599.8 ENSMUST00000169290.8 |
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| CDS GCA 72 bp | ACGAAAAATTCAGTTAGGTTTACAAGTTCATTGGCTTaGGTGATTCCATGCTTCTGTGTCTGGGCTTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: TKNSVRFTSSLA*VIPCFCVWAFD Trigger: ATCAAAAGCCCAGACACAGAAGCATGGAATCACGCAAGCCAATGAACTTGTAAACCTAACTGAATTTTTCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000163437.2 ENSMUST00000168599.8 |
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| CDS CAA 72 bp | TTGGCTTTAATAGCTACTCGATCAGCTTCGCAAATTTaGTTTGGTTCATCTTCAACAATTCTCCAATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LALIATRSASQI*FGSSSTILQFL Trigger: AAGGAATTGGAGAATTGTTGAAGATGAACCAAACAAAATTTGCGAAGCTGATCGAGTAGCTATTAAAGCCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002790.14 ENSMUST00000168599.8 ENSMUST00000169290.8 |
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