Pregenerated sensors for CSDE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068823Ensembl transcript IDs: ENSMUST00000029446.13, ENSMUST00000195889.5, ENSMUST00000197488.5, ENSMUST00000197827.5, ENSMUST00000198174.2, ENSMUST00000198180.5, ENSMUST00000199240.5, ENSMUST00000199420.5, ENSMUST00000199571.5
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCTCCTCCACAATCTCAATCATTCCTTGGTACTCAATCTGTGTTaGATCAACACCTCTCAGAGGGCGAATGACTTTACCAGAGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: PLLHNLNHSLVLNLC*INTSQRANDFTRVD Trigger: ATCTACTCTGGTAAAGTCATTCGCCCTCTGAGAGGTGTTGATCCAACACAGATTGAGTACCAAGGAATGATTGAGATTGTGGAGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CCA 90 bp | ACTTCACCTTTCATATCCCCCTCCTCCACAATCTCAATCATTCCTTaGTACTCAATCTGTGTTGGATCAACACCTCTCAGAGGGCGAATG | + |
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Preference number: 1 (lower is better) Translates to: TSPFISPSSTISIIP*YSICVGSTPLRGRM Trigger: CATTCGCCCTCTGAGAGGTGTTGATCCAACACAGATTGAGTACCAAGGAATGATTGAGATTGTGGAGGAGGGGGATATGAAAGGTGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR TCA 90 bp | AACCTCTATGTTGGTTGCTCGTTCCAATTTGTCACGTCGGTCTGTTaGAATATTAAACCTAACATGGTCACCTTCCAGCAGGGTCACTTT | + |
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Preference number: 1 (lower is better) Translates to: NLYVGCSFQFVTSVC*NIKPNMVTFQQGHF Trigger: AAAGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATTTCAACAGACCGACGTGACAAATTGGAACGAGCAACCAACATAGAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR CCA 90 bp | CGTTCCAATTTGTCACGTCGGTCTGTTGAAATATTAAACCTAACATaGTCACCTTCCAGCAGGGTCACTTTGGATTTTGTGTCTTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: RSNLSRRSVEILNLT*SPSSRVTLDFVSLS Trigger: AGACAAAGACACAAAATCCAAAGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATTTCAACAGACCGACGTGACAAATTGGAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR GCA 90 bp | TTGGAGTTAGAATTACGACCTAAAAGTCTCACGCAAGTTGCAATCTaGTGTCCAGGCCTCTGTTTGTCACTAATACTAAATTCAACCTTA | + |
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Preference number: 1 (lower is better) Translates to: LELELRPKSLTQVAI*CPGLCLSLILNSTL Trigger: TAAGGTTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCAACTTGCGTGAGACTTTTAGGTCGTAATTCTAACTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CCA 90 bp | AAAGGGAAGTTCTTTAGGAATCACAAAGTCAACTTTGATTCGTCCTaGCAATGGGTCATTCTGATGAGAAGGAAAAACGATTTTAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: KGKFFRNHKVNFDSS*QWVILMRRKNDFSW Trigger: CCAGCTAAAATCGTTTTTCCTTCTCATCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR CCA 90 bp | AAGTTCTTTAGGAATCACAAAGTCAACTTTGATTCGTCCTGGCAATaGGTCATTCTGATGAGAAGGAAAAACGATTTTAGCTGGAGATTT | + |
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Preference number: 1 (lower is better) Translates to: KFFRNHKVNFDSSWQ*VILMRRKNDFSWRF Trigger: AAATCTCCAGCTAAAATCGTTTTTCCTTCTCATCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAATAAAGCTCCTAAATTaGCACTATAAGGCGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: LHQGSSACIEQGTGTTGLIKLLN*HYKAPP Trigger: AGGTGGCGCCTTATAGTGTCAATTTAGGAGCTTTAT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| 3UTR-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACACACTTCATTTGCATaGAATTCTGCACCACACATA | + |
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Preference number: 2 (lower is better) Translates to: LHQGSSACIEQGTGTTGLHTSFA*NSAPHI Trigger: TATGTGTGGTGCAGAATTTCATGCAAATGAAGTGTG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| 3UTR-3UTR GCA 90 bp | GCAATCCCCTTTGTTGGCCATCCCAACTATGCCAAAAGGATACACTTCACCTTTACGCAAGTTGCAATCTaGTGTCCAGGCCTCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: AIPFVGHPNYAKRIHFTFTQVAI*CPGLCL Trigger: CAAACAGAGGCCTGGACAGCAGATTGCAACTTGCGT...AAAGGTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCCAACAAAGGGGATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAACATGGTCACCTTCCAGCAGGGTCACTTTGGATTTTGTGTCTTTGTCTCCTCACAAAGTCAACTTTaGTTCGTCCTGGCAATGGGT | + |
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Preference number: 2 (lower is better) Translates to: PNMVTFQQGHFGFCVFVSSQSQL*FVLAMG Trigger: ACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGA...GGAGACAAAGACACAAAATCCAAAGTGACCCTGCTGGAAGGTGACCATGTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR-3UTR CCA 90 bp | CGTCGGTCTGTTGAAATATTAAACCTAACATGGTCACCTTCCAGCAGGGTCACTGATTCGTCCTGGCAATaGGTCATTCTGATGAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RRSVEILNLTWSPSSRVTDSSWQ*VILMRR Trigger: CCTTCTCATCAGAATGACCCATTGCCAGGACGAATC...AGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATTTCAACAGACCGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR CAA 90 bp | ATCTCACTGAAGTGGAAGAACATACGAGCATCACGATCCACACACTaGATGAAACCAAAACCATCTCTCATGGCAGCAATCACACCCATC | + |
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Preference number: 2 (lower is better) Translates to: ISLKWKNIRASRSTH*MKPKPSLMAAITPI Trigger: GATGGGTGTGATTGCTGCCATGAGAGATGGTTTTGGTTTCATCAAGTGTGTGGATCGTGATGCTCGTATGTTCTTCCACTTCAGTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR TCA 90 bp | GCAATCCCCTTTGTTGGCCATCCCAACTATGCCAAAAGGATACACTTCACCTTTTCCACATCCTTGGCTTaGAAAGCAATCGTCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: AIPFVGHPNYAKRIHFTFSTSLA*KAIVSF Trigger: GAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGA...AAAGGTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCCAACAAAGGGGATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTTAAATTATCACACTaGTGGCACACTTCATTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LHQGSSACIEQGTGTTGLFKLSH*WHTSFA Trigger: TGCAAATGAAGTGTGCCAGCAGTGTGATAATTTAAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| 3UTR-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGCAGCAGCAATTTTGTaGATTCGTCTTTTGTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: LHQGSSACIEQGTGTTGLAAAIL*IRLLFK Trigger: TTTAAACAAAAGACGAATGCACAAAATTGCTGCTGC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCCACATCCTTGGCTTGAAAAGCAATCGTCAGTTTCACCCCACAGTCGTCATCTTCTTTTTCTACGGTaGCCAGAAAACGATGATCTG | + |
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Preference number: 2 (lower is better) Translates to: LPHPWLEKQSSVSPHSRHLLFLR*PENDDL Trigger: CAGATCATCGTTTTCTGGGCACCGTAGAAAAAGAAG...ATGACGACTGTGGGGTGAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CAA 90 bp | TGGGCTTTGTTTACTTTCTCAGCACTGACTTTATTGCCTTTGCCTTaGGACAAGCTGTATTCAACCATGTCTCCCAGTTCCAGGCTATCA | + |
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Preference number: 2 (lower is better) Translates to: WALFTFSALTLLPLP*DKLYSTMSPSSRLS Trigger: TGATAGCCTGGAACTGGGAGACATGGTTGAATACAGCTTGTCCAAAGGCAAAGGCAATAAAGTCAGTGCTGAGAAAGTAAACAAAGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CAA 90 bp | CCATTCACTGAGTGGGCTTTGTTTACTTTCTCAGCACTGACTTTATaGCCTTTGCCTTTGGACAAGCTGTATTCAACCATGTCTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PFTEWALFTFSALTL*PLPLDKLYSTMSPS Trigger: ACTGGGAGACATGGTTGAATACAGCTTGTCCAAAGGCAAAGGCAATAAAGTCAGTGCTGAGAAAGTAAACAAAGCCCACTCAGTGAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR TCA 90 bp | GCAATCCCCTTTGTTGGCCATCCCAACTATGCCAAAAGGATACACTTCACCTTTATAAAGCTCCTAAATTaGCACTATAAGGCGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: AIPFVGHPNYAKRIHFTFIKLLN*HYKAPP Trigger: AGGTGGCGCCTTATAGTGTCAATTTAGGAGCTTTAT...AAAGGTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCCAACAAAGGGGATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTTGGATCAACACCTCTCAGAGGGCGAATGACTTTACCAGAGTAGATGGTATTATCTTTCAGAGTTaGCACATAACCCAAGAGACG | + |
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Preference number: 2 (lower is better) Translates to: LCWINTSQRANDFTRVDGIIFQS*HITQET Trigger: CGTCTCTTGGGTTATGTGGCAACTCTGAAAGATAAT...ACCATCTACTCTGGTAAAGTCATTCGCCCTCTGAGAGGTGTTGATCCAACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR CCA 90 bp | CGTCGGTCTGTTGAAATATTAAACCTAACATGGTCACCTTCCAGCAGGGTCACTAACTTTGATTCGTCCTaGCAATGGGTCATTCTGATG | + |
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Preference number: 2 (lower is better) Translates to: RRSVEILNLTWSPSSRVTNFDSS*QWVILM Trigger: CATCAGAATGACCCATTGCCAGGACGAATCAAAGTT...AGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATTTCAACAGACCGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR-3UTR CCA 90 bp | GCAATCCCCTTTGTTGGCCATCCCAACTATGCCAAAAGGATACACTTCACCTTTATCCTTCCACATCCTTaGCTTGAAAAGCAATCGTCA | + |
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Preference number: 2 (lower is better) Translates to: AIPFVGHPNYAKRIHFTFILPHP*LEKQSS Trigger: TGACGATTGCTTTTCAAGCCAAGGATGTGGAAGGAT...AAAGGTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCCAACAAAGGGGATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CAA 90 bp | CTTATCTCCTATTTGAGGAGAAGTAGATCCTTCCACATCCTTGGCTaGAAAAGCAATCGTCAGTTTCACCCCACAGTCGTCATAAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LISYLRRSRSFHILG*KSNRQFHPTVVISY Trigger: ATAGCTTATGACGACTGTGGGGTGAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTACTTCTCCTCAAATAGGAGATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACGCAAGTTGCAATCTGCTGTCCAGGCCTCTGTTTGTCACTAATACTAAATCATCTAGAATCTCACTaGAGTGGAAGAACATACGAG | + |
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Preference number: 2 (lower is better) Translates to: LTQVAICCPGLCLSLILNHLESH*SGRTYE Trigger: CTCGTATGTTCTTCCACTTCAGTGAGATTCTAGATG...ATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCAACTTGCGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACGCAAGTTGCAATCTGCTGTCCAGGCCTCTGTTTGTCACTAATACTAAATACCTTATCTCCTATTTaGGGAGAAGTAGATCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LTQVAICCPGLCLSLILNTLSPI*GEVDPS Trigger: GGAAGGATCTACTTCTCCTCAAATAGGAGATAAGGT...ATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCAACTTGCGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CAA 90 bp | CTAACATGGTCACCTTCCAGCAGGGTCACTTTGGATTTTGTGTCTTaGTCTCCAAAGGGAAGTTCTTTAGGAATCACAAAGTCAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: LTWSPSSRVTLDFVS*SPKGSSLGITKSTL Trigger: CAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTTTGGAGACAAAGACACAAAATCCAAAGTGACCCTGCTGGAAGGTGACCATGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAAGTAGATCCTTCCACATCCTTGGCTTGAAAAGCAATCGTCAGTTTCACTTAATCCTAATAGCATaGTTTCTTTGGGCAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: RRSRSFHILGLKSNRQFHLILIA*FLWAES Trigger: GCTCTCTGCCCAAAGAAATCATGCTATTAGGATTAA...GTGAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTACTTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAATCTGCTGTCCAGGCCTCTGTTTGTCACTAATACTAAATTCAACCTTATCGTGCCCAGAAAACGATaGTCTGAATGGGAATGGAAT | + |
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Preference number: 2 (lower is better) Translates to: CNLLSRPLFVTNTKFNLIVPRKR*SEWEWN Trigger: ATTCCATTCCCATTCAGATCATCGTTTTCTGGGCAC...GATAAGGTTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAATCTGCTGTCCAGGCCTCTGTTTGTCACTAATACTAAATTCAACCTTATCACTTCATCTGCAATGTaGAGCTGGTTCCCATCTAGA | + |
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Preference number: 2 (lower is better) Translates to: CNLLSRPLFVTNTKFNLITSSAM*SWFPSR Trigger: TCTAGATGGGAACCAGCTCCACATTGCAGATGAAGT...GATAAGGTTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTTGGATCAACACCTCTCAGAGGGCGAATGACTTTACCAGAGTAGATGGTAAAGTCTCACGCAAGTaGCAATCTGCTGTCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: LCWINTSQRANDFTRVDGKVSRK*QSAVQA Trigger: GGCCTGGACAGCAGATTGCAACTTGCGTGAGACTTT...ACCATCTACTCTGGTAAAGTCATTCGCCCTCTGAGAGGTGTTGATCCAACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR TCA 72 bp | CTGCAATGTGGAGCTGGTTCCCATCTAGAATCTCACTaGAGTGGAAGAACATACGAGCATCACGATCCACAC | + |
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Preference number: 3 (lower is better) Translates to: LQCGAGSHLESH*SGRTYEHHDPH Trigger: GTGTGGATCGTGATGCTCGTATGTTCTTCCACTTCAGTGAGATTCTAGATGGGAACCAGCTCCACATTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTTGGATCAACACCTCTCAGAGGGCGAATGACTTTACCAGAGTAGATGGTTCAGCACTGACTTTATaGCCTTTGCCTTTGGACAAG | + |
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Preference number: 3 (lower is better) Translates to: LCWINTSQRANDFTRVDGSALTL*PLPLDK Trigger: CTTGTCCAAAGGCAAAGGCAATAAAGTCAGTGCTGA...ACCATCTACTCTGGTAAAGTCATTCGCCCTCTGAGAGGTGTTGATCCAACACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTTGGATCAACACCTCTCAGAGGGCGAATGACTTTACCAGAGTAGATGGTTCACGATCCACACACTaGATGAAACCAAAACCATCT | + |
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Preference number: 3 (lower is better) Translates to: LCWINTSQRANDFTRVDGSRSTH*MKPKPS Trigger: AGATGGTTTTGGTTTCATCAAGTGTGTGGATCGTGA...ACCATCTACTCTGGTAAAGTCATTCGCCCTCTGAGAGGTGTTGATCCAACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCCACATCCTTGGCTTGAAAAGCAATCGTCAGTTTCACCCCACAGTCGTCATAATAGCATGATTTCTTaGGGCAGAGAGCATATCAGG | + |
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Preference number: 3 (lower is better) Translates to: LPHPWLEKQSSVSPHSRHNSMIS*GREHIR Trigger: CCTGATATGCTCTCTGCCCAAAGAAATCATGCTATT...ATGACGACTGTGGGGTGAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR TCA 72 bp | AAAGTGGCTTCTTTTTCTACGGTGCCCAGAAAACGATaGTCTGAATGGGAATGGAATGAAACCGTGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: KVASFSTVPRKR*SEWEWNETVPL Trigger: CAAGGGCACGGTTTCATTCCATTCCCATTCAGATCATCGTTTTCTGGGCACCGTAGAAAAAGAAGCCACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CCA 72 bp | TCAGGAACCACAGTAAACTCTACTTCATCTGCAATGTaGAGCTGGTTCCCATCTAGAATCTCACTGAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: SGTTVNSTSSAM*SWFPSRISLKW Trigger: CCACTTCAGTGAGATTCTAGATGGGAACCAGCTCCACATTGCAGATGAAGTAGAGTTTACTGTGGTTCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAGAAGTAGATCCTTCCACATCCTTGGCTTGAAAAGCAATCGTCAGTTTCACTCTGCCTCCTTGTCTTaGCCTTTATTTGGGCTTGTA | + |
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Preference number: 3 (lower is better) Translates to: RRSRSFHILGLKSNRQFHSASLS*PLFGLV Trigger: TACAAGCCCAAATAAAGGCAAAGACAAGGAGGCAGA...GTGAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTACTTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR TCA 72 bp | GTTGGTTGCTCGTTCCAATTTGTCACGTCGGTCTGTTaGAATATTAAACCTAACATGGTCACCTTCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: VGCSFQFVTSVC*NIKPNMVTFQQ Trigger: CTGCTGGAAGGTGACCATGTTAGGTTTAATATTTCAACAGACCGACGTGACAAATTGGAACGAGCAACCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR CCA 72 bp | ACCACAGTAAACTCTACTTCATCTGCAATGTGGAGCTaGTTCCCATCTAGAATCTCACTGAAGTGGAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: TTVNSTSSAMWS*FPSRISLKWKN Trigger: GTTCTTCCACTTCAGTGAGATTCTAGATGGGAACCAGCTCCACATTGCAGATGAAGTAGAGTTTACTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR CAA 90 bp | AAGAGACGTTTGGAGTTAGAATTACGACCTAAAAGTCTCACGCAAGTTGCAATCCCATCTTCTGCCTCCTaGTCTTTGCCTTTATTTGGG | + |
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Preference number: 3 (lower is better) Translates to: KRRLELELRPKSLTQVAIPSSAS*SLPLFG Trigger: CCCAAATAAAGGCAAAGACAAGGAGGCAGAAGATGG...GATTGCAACTTGCGTGAGACTTTTAGGTCGTAATTCTAACTCCAAACGTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CCA 72 bp | TTGTCACGTCGGTCTGTTGAAATATTAAACCTAACATaGTCACCTTCCAGCAGGGTCACTTTGGATTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: LSRRSVEILNLT*SPSSRVTLDFV Trigger: CACAAAATCCAAAGTGACCCTGCTGGAAGGTGACCATGTTAGGTTTAATATTTCAACAGACCGACGTGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR-3UTR CAA 90 bp | GTTGCTCGTTCCAATTTGTCACGTCGGTCTGTTGAAATATTAAACCTAACATGGTCCAGCAGGGTCACTTaGGATTTTGTGTCTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: VARSNLSRRSVEILNLTWSSRVT*DFVSLS Trigger: AGACAAAGACACAAAATCCAAAGTGACCCTGCTGGA...CCATGTTAGGTTTAATATTTCAACAGACCGACGTGACAAATTGGAACGAGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR GCA 72 bp | GAATTACGACCTAAAAGTCTCACGCAAGTTGCAATCTaGTGTCCAGGCCTCTGTTTGTCACTAATACTAAAT | + |
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Preference number: 3 (lower is better) Translates to: ELRPKSLTQVAI*CPGLCLSLILN Trigger: ATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCAACTTGCGTGAGACTTTTAGGTCGTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAATCTGCTGTCCAGGCCTCTGTTTGTCACTAATACTAAATTCAACCTTATCTTCCACATCCTTGGCTaGAAAAGCAATCGTCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: CNLLSRPLFVTNTKFNLIFHILG*KSNRQF Trigger: AAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAA...GATAAGGTTGAATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CCA 72 bp | AGGAATCACAAAGTCAACTTTGATTCGTCCTGGCAATaGGTCATTCTGATGAGAAGGAAAAACGATTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RNHKVNFDSSWQ*VILMRRKNDFS Trigger: GCTAAAATCGTTTTTCCTTCTCATCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
||
| 3UTR CCA 72 bp | TTCTTTAGGAATCACAAAGTCAACTTTGATTCGTCCTaGCAATGGGTCATTCTGATGAGAAGGAAAAACGAT | + |
|
Preference number: 3 (lower is better) Translates to: FFRNHKVNFDSS*QWVILMRRKND Trigger: ATCGTTTTTCCTTCTCATCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACTCCCTGTTGGACTCTaGCCCGGGGCAGCTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLPVGL*PGAAGD Trigger: ATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029446.13 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGCATACACTCCCTGTTaGACTCTGACCCGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLAYTPC*TLTRGS Trigger: GCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029446.13 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACTCTCAGAGGGCGAATaGCTTTACCAGAGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLSEGE*LYQSRW Trigger: CCATCTACTCTGGTAAAGTCATTCGCCCTCTGAGAG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAACGCAAGTTGCAATCTaGTGTCCAGGCCTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLTQVAI*CPGLCL Trigger: CAAACAGAGGCCTGGACAGCAGATTGCAACTTGCGT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAAGTCTCACGCAAGTTaGAATCTGCTGTCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLKSHAS*NLLSRP Trigger: AGGCCTGGACAGCAGATTGCAACTTGCGTGAGACTT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACACTTCCCAGTGCGCTaGTTAAGGATCACTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLHFPVR*LRITEN Trigger: ATTCTCAGTGATCCTTAATCAGCGCACTGGGAAGTG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACTGCTGAAGTACCATTaGGGTACCCATTGTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLLKYH*GTHCVH Trigger: ATGGACACAATGGGTACCCCAATGGTACTTCAGCAG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACAAACGCCTCCTTCATaGCACAAACTACTCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLQTPPS*HKLLLD Trigger: GTCAAGGAGTAGTTTGTGCCATGAAGGAGGCGTTTG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATCTAGCTTGCCGTTCTaGACACTGAATGAATCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSSLPF*TLNESV Trigger: TACGGATTCATTCAGTGTTCAGAACGGCAAGCTAGA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTACTCTCTAAGTTGTaGGGAACAGCGCACACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLLSKL*GTAHTT Trigger: AGTTGTGTGCGCTGTTCCTCACAACTTAGAGAGTAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029446.13 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATCACAAAGTCAACTTTaGTTCGTCCTGGCAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSQSQL*FVLAMG Trigger: ACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGTGCCCAGAAAACGATaGTCTGAATGGGAATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLVPRKR*SEWEWN Trigger: ATTCCATTCCCATTCAGATCATCGTTTTCTGGGCAC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATCCACATCCTTGGCTTaGAAAGCAATCGTCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSTSLA*KAIVSF Trigger: GAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAGCTCAACGCCATCCTaGACTTCTTTCACATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSSTPS*TSFTWK Trigger: TTTCCATGTGAAAGAAGTTCAGGATGGCGTTGAGCT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATGGCCATCCCAACTATaGCAAAAGGATACACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLWPSQL*QKDTLH Trigger: GTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCCA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACAAAACCATCTCTCATaGCAGCAATCACACCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLQNHLS*QQSHPS Trigger: AGATGGGTGTGATTGCTGCCATGAGAGATGGTTTTG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAACTTCATCTGCAATGTaGAGCTGGTTCCCATCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLTSSAM*SWFPSR Trigger: TCTAGATGGGAACCAGCTCCACATTGCAGATGAAGT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGTACTCAATCTGTGTTaGATCAACACCTCTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLVLNLC*INTSQR Trigger: CCTCTGAGAGGTGTTGATCCAACACAGATTGAGTAC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAGTCCTCCGGTCAGATaGTACTTCAAATTCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSPPVR*YFKFNI Trigger: GATGTTGAATTTGAAGTATCATCTGACCGGAGGACT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACTTGAGGCAATAGTCTaGCATCTGTTGCAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLEAIV*HLLQLL Trigger: AAGAAGTTGCAACAGATGTCAGACTATTGCCTCAAG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACATCTAGAATCTCACTaGAGTGGAAGAACATACGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLHLESH*SGRTYE Trigger: CTCGTATGTTCTTCCACTTCAGTGAGATTCTAGATG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAACCTTATCTCCTATTTaGGGAGAAGTAGATCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLTLSPI*GEVDPS Trigger: GGAAGGATCTACTTCTCCTCAAATAGGAGATAAGGT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAACCTCTATGTTGGTTaGTCGTTCCAATTTGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLNLYVG*SFQFVT Trigger: CGTGACAAATTGGAACGAGCAACCAACATAGAGGTT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACTTCTTTTTCTACGGTaGCCAGAAAACGATGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLLFLR*PENDDL Trigger: CAGATCATCGTTTTCTGGGCACCGTAGAAAAAGAAG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGATTCGTCCTGGCAATaGGTCATTCTGGTTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLDSSWQ*VILVFT Trigger: AGTAAAAACCAGAATGACCCATTGCCAGGACGAATC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAACTTTGATTCGTCCTaGCAATGGGTCATTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLNFDSS*QWVILV Trigger: AACCAGAATGACCCATTGCCAGGACGAATCAAAGTT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAATATTAAACCTAACATaGTCACCTTCCAGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLILNLT*SPSSRV Trigger: GACCCTGCTGGAAGGTGACCATGTTAGGTTTAATAT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAATCCTTCCACATCCTTaGCTTGAAAAGCAATCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLILPHP*LEKQSS Trigger: TGACGATTGCTTTTCAAGCCAAGGATGTGGAAGGAT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAAAATGACTGTTCCTTaGGGCAATAGTCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLKMTVP*GNSLTS Trigger: AGATGTCAGACTATTGCCTCAAGGAACAGTCATTTT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGTCACGTCGGTCTGTTaGAATATTAAACCTAACATG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLVTSVC*NIKPNM Trigger: CATGTTAGGTTTAATATTTCAACAGACCGACGTGAC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTAATCCTAATAGCATaGTTTCTTTGGGCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLILIA*FLWAES Trigger: GCTCTCTGCCCAAAGAAATCATGCTATTAGGATTAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAGTAATGCCATTCACTaGGTGGGCTTTGTTTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSNAIH*VGFVYF Trigger: AAAGTAAACAAAGCCCACTCAGTGAATGGCATTACT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATATAATGCCATCTTCTaGCTCCTTGTCTTTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLYNAIF*LLVFAF Trigger: AAAGGCAAAGACAAGGAGGCAGAAGATGGCATTATA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAATTATCTTTCAGAGTTaGCACATAACCCAAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLIIFQS*HITQET Trigger: CGTCTCTTGGGTTATGTGGCAACTCTGAAAGATAAT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTGTGTCCATTGTTGTaGAGAAGGTTTGGATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLCPLL*RRFGSK Trigger: CTTTGATCCAAACCTTCTCCACAACAATGGACACAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGGCAATGGGTCATTCTaGTTTTTACTGGGTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLGNGSF*FLLGTF Trigger: AAAAGTACCCAGTAAAAACCAGAATGACCCATTGCC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATATTGCCTTTGCCTTTaGACAAGCTGTATTCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLYCLCL*TSCIQP Trigger: TGGTTGAATACAGCTTGTCCAAAGGCAAAGGCAATA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAATGCCATTCACTGAGTaGGCTTTGTTTACTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLMPFTE*ALFTFS Trigger: TGAGAAAGTAAACAAAGCCCACTCAGTGAATGGCAT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR TCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTAATAAAGCCAAACTaGTCTTTCACACACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLIKPN*SFTHST Trigger: TGTGGAGTGTGTGAAAGATCAGTTTGGCTTTATTAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAATCTCAATCATTCCTTaGTACTCAATCTGTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLISIIP*YSICVG Trigger: TCCAACACAGATTGAGTACCAAGGAATGATTGAGAT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR GCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTAAGTCTTGGAGGTTaGCATTATATTGTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLSLGG*HYIVNS Trigger: ACTGTTCACAATATAATGGCAACCTCCAAGACTTAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CCA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTTACTGGGTACTTTTaGGATAACTTTGGTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHQGSSACIEQGTGTTGLFTGYF*DNFGYS Trigger: ACTGTAACCAAAGTTATCCCAAAAGTACCCAGTAAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| 3UTR CAA 72 bp | TATTTGAGGAGAAGTAGATCCTTCCACATCCTTGGCTaGAAAAGCAATCGTCAGTTTCACCCCACAGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLRRSRSFHILG*KSNRQFHPTVV Trigger: GACGACTGTGGGGTGAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAAGGATCTACTTCTCCTCAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| 3UTR CAA 72 bp | AAGTGGAAGAACATACGAGCATCACGATCCACACACTaGATGAAACCAAAACCATCTCTCATGGCAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: KWKNIRASRSTH*MKPKPSLMAAI Trigger: GATTGCTGCCATGAGAGATGGTTTTGGTTTCATCAAGTGTGTGGATCGTGATGCTCGTATGTTCTTCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| CDS-3UTR TCA 90 bp | GCAATCCCCTTTGTTGGCCATCCCAACTATGCCAAAAGGATACACTTCACCTTTAAAATGACTGTTCCTTaGGGCAATAGTCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: AIPFVGHPNYAKRIHFTFKMTVP*GNSLTS Trigger: AGATGTCAGACTATTGCCTCAAGGAACAGTCATTTT...AAAGGTGAAGTGTATCCTTTTGGCATAGTTGGGATGGCCAACAAAGGGGATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGGGAAGTTCTTTAGGAATCACAAAGTCAACTTTGATTCGTCCTGGCAACAAACGCCTCCTTCATaGCACAAACTACTCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SKGKFFRNHKVNFDSSWQQTPPS*HKLLLD Trigger: GTCAAGGAGTAGTTTGTGCCATGAAGGAGGCGTTTG...TTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| 3UTR CAA 72 bp | GCTTTGTTTACTTTCTCAGCACTGACTTTATTGCCTTaGCCTTTGGACAAGCTGTATTCAACCATGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALFTFSALTLLP*PLDKLYSTMSP Trigger: GGGAGACATGGTTGAATACAGCTTGTCCAAAGGCAAAGGCAATAAAGTCAGTGCTGAGAAAGTAAACAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| CDS-3UTR TCA 90 bp | ACCTCTATGTTGGTTGCTCGTTCCAATTTGTCACGTCGGTCTGTTGAAATATTAAAAATGACTGTTCCTTaGGGCAATAGTCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TSMLVARSNLSRRSVEILKMTVP*GNSLTS Trigger: AGATGTCAGACTATTGCCTCAAGGAACAGTCATTTT...TAATATTTCAACAGACCGACGTGACAAATTGGAACGAGCAACCAACATAGAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGACGTTTGGAGTTAGAATTACGACCTAAAAGTCTCACGCAAGTTGCAATCTTTGTCACGTCGGTCTaGTTTTTACTGGGTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRRLELELRPKSLTQVAIFVTSV*FLLGTF Trigger: AAAAGTACCCAGTAAAAACCAGACCGACGTGACAAA...GATTGCAACTTGCGTGAGACTTTTAGGTCGTAATTCTAACTCCAAACGTCTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
||
| CDS-3UTR CCA 90 bp | AAGAACATACGAGCATCACGATCCACACACTTGATGAAACCAAAACCATCTCTCTTTACTGGGTACTTTTaGGATAACTTTGGTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNIRASRSTHLMKPKPSLFTGYF*DNFGYS Trigger: ACTGTAACCAAAGTTATCCCAAAAGTACCCAGTAAA...GAGAGATGGTTTTGGTTTCATCAAGTGTGTGGATCGTGATGCTCGTATGTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| CDS-3UTR CCA 90 bp | CCAAAGGGAAGTTCTTTAGGAATCACAAAGTCAACTTTGATTCGTCCTGGCAATTTTACTGGGTACTTTTaGGATAACTTTGGTTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKGSSLGITKSTLIRPGNFTGYF*DNFGYS Trigger: ACTGTAACCAAAGTTATCCCAAAAGTACCCAGTAAA...ATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
||
| 3UTR CAA 72 bp | TTTGATAGAACCTCTATGTTGGTTGCTCGTTCCAATTaGTCACGTCGGTCTGTTGAAATATTAAACCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: FDRTSMLVARSN*SRRSVEILNLT Trigger: TGTTAGGTTTAATATTTCAACAGACCGACGTGACAAATTGGAACGAGCAACCAACATAGAGGTTCTATCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAGCATACACTCCCTGTaGGACTCTGACCCGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSIHSL*DSDPGQ Trigger: CTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029446.13 |
||
| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGCTGCTGAAGTACCATaGGGGTACCCATTGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLAAEVP*GYPLCP Trigger: TGGACACAATGGGTACCCCAATGGTACTTCAGCAGC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGGCACAAACTACTCCTaGACAGCGAGCCTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLGTNYS*TASLLL Trigger: AAGAAGCAGGCTCGCTGTCAAGGAGTAGTTTGTGCC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAAAGTCTCACGCAAGTaGCAATCTGCTGTCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLKVSRK*QSAVQA Trigger: GGCCTGGACAGCAGATTGCAACTTGCGTGAGACTTT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAGGCAATCCCCTTTGTaGGCCATCCCAACTATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLRQSPL*AIPTMP Trigger: TGGCATAGTTGGGATGGCCAACAAAGGGGATTGCCT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACCATTGGGGTACCCATaGTGTCCATTGTTGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLPLGYP*CPLLWR Trigger: TCTCCACAACAATGGACACAATGGGTACCCCAATGG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATGTAGGCAATCCCCTTaGTTGGCCATCCCAACTATG | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLCRQSP*LAIPTM Trigger: CATAGTTGGGATGGCCAACAAAGGGGATTGCCTACA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAACAGCGCACACAACTaGTCCGTTCATTCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLNSAHN*SVHSFF Trigger: GAAGAACGAATGAACGGACAAGTTGTGTGCGCTGTT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029446.13 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAGTTGCTCGTTCCAATTaGTCACGTCGGTCTGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLVARSN*SRRSVE Trigger: TTCAACAGACCGACGTGACAAATTGGAACGAGCAAC...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACCATCTTCTGCCTCCTaGTCTTTGCCTTTATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLPSSAS*SLPLFG Trigger: CCCAAATAAAGGCAAAGACAAGGAGGCAGAAGATGG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAACACACAACTGGAACTaGACACTCTCCCCTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLTHNWN*TLSPFC Trigger: ACAGAAAGGGGAGAGTGTCAAGTTCCAGTTGTGTGT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACCATTGTGTCCATTGTaGTGGAGAAGGTTTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLPLCPL*WRRFGS Trigger: TGATCCAAACCTTCTCCACAACAATGGACACAATGG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATACCCATTGTGTCCATaGTTGTGGAGAAGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLYPLCP*LWRRFG Trigger: TCCAAACCTTCTCCACAACAATGGACACAATGGGTA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAATCACAAAGTCAACTTaGATTCGTCCTGGCAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLITKST*IRPGNG Trigger: CCCATTGCCAGGACGAATCAAAGTTGACTTTGTGAT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATCCAGCAGGGTCACTTaGGATTTTGTGTCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSSRVT*DFVSLS Trigger: AGACAAAGACACAAAATCCAAAGTGACCCTGCTGGA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATCTGCCTCCTTGTCTTaGCCTTTATTTGGGCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSASLS*PLFGLV Trigger: TACAAGCCCAAATAAAGGCAAAGACAAGGAGGCAGA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATCAGCACTGACTTTATaGCCTTTGCCTTTGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSALTL*PLPLDK Trigger: CTTGTCCAAAGGCAAAGGCAATAAAGTCAGTGCTGA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATCACGATCCACACACTaGATGAAACCAAAACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLSRSTH*MKPKPS Trigger: AGATGGTTTTGGTTTCATCAAGTGTGTGGATCGTGA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAATAGCATGATTTCTTaGGGCAGAGAGCATATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLNSMIS*GREHIR Trigger: CCTGATATGCTCTCTGCCCAAAGAAATCATGCTATT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTCCACATCCTTGGCTaGAAAAGCAATCGTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLFHILG*KSNRQF Trigger: AAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTATTGCCTTTGCCTTaGGACAAGCTGTATTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLLPLP*DKLYST Trigger: GGTTGAATACAGCTTGTCCAAAGGCAAAGGCAATAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTACTGACTTTATTGCCTTaGCCTTTGGACAAGCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLTLLP*PLDKLY Trigger: ATACAGCTTGTCCAAAGGCAAAGGCAATAAAGTCAG...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTACCATTTCTGTCCTaGATTGTGAATTCCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLPFLS*IVNSTS Trigger: TGACGTGGAATTCACAATCAAGGACAGAAATGGTAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATTGGATTTTGTGTCTTaGTCTCCAAAGGGAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLLDFVS*SPKGSS Trigger: AGAACTTCCCTTTGGAGACAAAGACACAAAATCCAA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
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| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTATGTCCAGGCCTCTGTTaGTCACTAATACTAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLCPGLC*SLILNS Trigger: TGAATTTAGTATTAGTGACAAACAGAGGCCTGGACA...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CAA 90 bp | CTACACCAAGGATCAAGTGCCTGTATTGAACAGGGCACTGGAACCACGGGGCTAAATTATCTTTCAGAGTaGCCACATAACCCAAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSACIEQGTGTTGLNYLSE*PHNPRD Trigger: GTCTCTTGGGTTATGTGGCAACTCTGAAAGATAATT...TAGCCCCGTGGTTCCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029446.13 ENSMUST00000198180.5 ENSMUST00000199420.5 |
||
| CDS-3UTR CAA 90 bp | AAGGGAAGTTCTTTAGGAATCACAAAGTCAACTTTGATTCGTCCTGGCAATGGGGGCACAAACTACTCCTaGACAGCGAGCCTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KGSSLGITKSTLIRPGNGGTNYS*TASLLL Trigger: AAGAAGCAGGCTCGCTGTCAAGGAGTAGTTTGTGCC...CCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGACGTTTGGAGTTAGAATTACGACCTAAAAGTCTCACGCAAGTTGCAATCGGCACAAACTACTCCTaGACAGCGAGCCTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KRRLELELRPKSLTQVAIGTNYS*TASLLL Trigger: AAGAAGCAGGCTCGCTGTCAAGGAGTAGTTTGTGCC...GATTGCAACTTGCGTGAGACTTTTAGGTCGTAATTCTAACTCCAAACGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
||
| CDS-3UTR CAA 90 bp | CTCACGCAAGTTGCAATCTGCTGTCCAGGCCTCTGTTTGTCACTAATACTAAATGTTGCTCGTTCCAATTaGTCACGTCGGTCTGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LTQVAICCPGLCLSLILNVARSN*SRRSGF Trigger: AAAACCAGACCGACGTGACAAATTGGAACGAGCAAC...ATTTAGTATTAGTGACAAACAGAGGCCTGGACAGCAGATTGCAACTTGCGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
||
| CDS TCA 90 bp | CTTTCGATAAAGCCAAACGCCTCCTTCATGGCACAAACTACTCCTTaGCAGCGAGCCTGCTTCTTTTTCAACAGCATAATATTACGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSIKPNASFMAQTTP*QRACFFFNSIILRA Trigger: TGCTCGTAATATTATGCTGTTGAAAAAGAAGCAGGCTCGCTGTCAAGGAGTAGTTTGTGCCATGAAGGAGGCGTTTGGCTTTATCGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000029446.13 ENSMUST00000195889.5 ENSMUST00000197488.5 ENSMUST00000197827.5 ENSMUST00000198180.5 ENSMUST00000199240.5 ENSMUST00000199420.5 ENSMUST00000199571.5 |
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| CDS-3UTR CAA 90 bp | CTTCCACATCCTTGGCTTGAAAAGCAATCGTCAGTTTCACCCCACAGTCGTCATTTACCATTTCTGTCCTaGATTGTGAATTCCACGTCA | + |
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Preference number: 5 (lower is better) Translates to: LPHPWLEKQSSVSPHSRHLPFLS*IVNSTS Trigger: TGACGTGGAATTCACAATCAAGGACAGAAATGGTAA...ATGACGACTGTGGGGTGAAACTGACGATTGCTTTTCAAGCCAAGGATGTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198174.2 |
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| CDS-3UTR CAA 90 bp | AAGGGAAGTTCTTTAGGAATCACAAAGTCAACTTTGATTCGTCCTGGCAATGGGTTACCATTTCTGTCCTaGATTGTGAATTCCACGTCA | + |
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Preference number: 5 (lower is better) Translates to: KGSSLGITKSTLIRPGNGLPFLS*IVNSTS Trigger: TGACGTGGAATTCACAATCAAGGACAGAAATGGTAA...CCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195889.5 |
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| CDS CCA 72 bp | TACTTCCCCATTACGTTCGTAGCATACACTCCCTGTTaGACTCTGACCCGGGGCAGCTGGAGATTTACTCTC | + |
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Preference number: 6 (lower is better) Translates to: YFPITFVAYTPC*TLTRGSWRFTL Trigger: GAGAGTAAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTAATGGGGAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029446.13 ENSMUST00000197827.5 |
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| CDS CAA 72 bp | ATACTTCCCCATTACGTTCGTAGCATACACTCCCTGTaGGACTCTGACCCGGGGCAGCTGGAGATTTACTCT | + |
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Preference number: 6 (lower is better) Translates to: ILPHYVRSIHSL*DSDPGQLEIYS Trigger: AGAGTAAATCTCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTAATGGGGAAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029446.13 ENSMUST00000197827.5 |
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| CDS CAA 72 bp | ATAACCCCAGTTTCACGAAGTGCTGCTGAAGTACCATaGGGGTACCCATTGTGTCCATTGTTGTGGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: ITPVSRSAAEVP*GYPLCPLLWRR Trigger: CCTTCTCCACAACAATGGACACAATGGGTACCCCAATGGTACTTCAGCAGCACTTCGTGAAACTGGGGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000029446.13 ENSMUST00000197488.5 ENSMUST00000197827.5 ENSMUST00000198180.5 ENSMUST00000199420.5 ENSMUST00000199571.5 |
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| CDS CAA 72 bp | TCACGAAGTGCTGCTGAAGTACCATTGGGGTACCCATaGTGTCCATTGTTGTGGAGAAGGTTTGGATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SRSAAEVPLGYP*CPLLWRRFGSK Trigger: CTTTGATCCAAACCTTCTCCACAACAATGGACACAATGGGTACCCCAATGGTACTTCAGCAGCACTTCGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029446.13 ENSMUST00000197488.5 ENSMUST00000197827.5 ENSMUST00000198180.5 ENSMUST00000199420.5 ENSMUST00000199571.5 |
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| CDS CAA 72 bp | AAAGCCAAACGCCTCCTTCATGGCACAAACTACTCCTaGACAGCGAGCCTGCTTCTTTTTCAACAGCATAAT | + |
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Preference number: 6 (lower is better) Translates to: KAKRLLHGTNYS*TASLLLFQQHN Trigger: ATTATGCTGTTGAAAAAGAAGCAGGCTCGCTGTCAAGGAGTAGTTTGTGCCATGAAGGAGGCGTTTGGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000029446.13 ENSMUST00000195889.5 ENSMUST00000197488.5 ENSMUST00000197827.5 ENSMUST00000198180.5 ENSMUST00000199240.5 ENSMUST00000199420.5 ENSMUST00000199571.5 |
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| CDS CAA 90 bp | TCTTTCGATAAAGCCAAACGCCTCCTTCATGGCACAAACTACTCCTaGACAGCGAGCCTGCTTCTTTTTCAACAGCATAATATTACGAGC | + |
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Preference number: 6 (lower is better) Translates to: SFDKAKRLLHGTNYS*TASLLLFQQHNITS Trigger: GCTCGTAATATTATGCTGTTGAAAAAGAAGCAGGCTCGCTGTCAAGGAGTAGTTTGTGCCATGAAGGAGGCGTTTGGCTTTATCGAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000029446.13 ENSMUST00000195889.5 ENSMUST00000197488.5 ENSMUST00000197827.5 ENSMUST00000198180.5 ENSMUST00000199240.5 ENSMUST00000199420.5 ENSMUST00000199571.5 |
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| CDS CAA 90 bp | TCTTTGTCTCCAAAGGGAAGTTCTTTAGGAATCACAAAGTCAACTTaGATTCGTCCTGGCAATGGGTCATTCTGGTTTTTACTGGGTACT | + |
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Preference number: 6 (lower is better) Translates to: SLSPKGSSLGITKST*IRPGNGSFWFLLGT Trigger: AGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTTTGGAGACAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000029446.13 ENSMUST00000197488.5 ENSMUST00000197827.5 ENSMUST00000198180.5 ENSMUST00000199240.5 ENSMUST00000199420.5 ENSMUST00000199571.5 |
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| CDS CAA 72 bp | CCAAAGGGAAGTTCTTTAGGAATCACAAAGTCAACTTaGATTCGTCCTGGCAATGGGTCATTCTGGTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: PKGSSLGITKST*IRPGNGSFWFL Trigger: TAAAAACCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAACTTCCCTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000029446.13 ENSMUST00000197488.5 ENSMUST00000197827.5 ENSMUST00000198180.5 ENSMUST00000199240.5 ENSMUST00000199420.5 ENSMUST00000199571.5 |
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| CDS CCA 72 bp | TTCTTTAGGAATCACAAAGTCAACTTTGATTCGTCCTaGCAATGGGTCATTCTGGTTTTTACTGGGTACTTT | + |
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Preference number: 6 (lower is better) Translates to: FFRNHKVNFDSS*QWVILVFTGYF Trigger: AAAGTACCCAGTAAAAACCAGAATGACCCATTGCCAGGACGAATCAAAGTTGACTTTGTGATTCCTAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000029446.13 ENSMUST00000197488.5 ENSMUST00000197827.5 ENSMUST00000198180.5 ENSMUST00000199240.5 ENSMUST00000199420.5 ENSMUST00000199571.5 |
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| CDS CAA 72 bp | AATTCAACATCATCTCCTACTTTTAAGTCTTGGAGGTaGCCATTATATTGTGAACAGTGGAAGAAAAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: NSTSSPTFKSWR*PLYCEQWKKSL Trigger: TAGACTTTTCTTCCACTGTTCACAATATAATGGCAACCTCCAAGACTTAAAAGTAGGAGATGATGTTGAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000029446.13 ENSMUST00000197488.5 ENSMUST00000197827.5 ENSMUST00000198180.5 ENSMUST00000199420.5 ENSMUST00000199571.5 |
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