Pregenerated sensors for CSAD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023044Ensembl transcript IDs: ENSMUST00000023805.3, ENSMUST00000229043.2, ENSMUST00000229252.2, ENSMUST00000229345.2, ENSMUST00000229470.2, ENSMUST00000229514.2, ENSMUST00000229938.2, ENSMUST00000230288.2, ENSMUST00000230322.2, ENSMUST00000230342.2, ENSMUST00000230656.2, ENSMUST00000230687.2, ENSMUST00000230708.2, ENSMUST00000231029.2, ENSMUST00000231030.2, ENSMUST00000231048.2
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGCCAAGGGCGGCAGGGCCCGGAGGCCCCTCTGCTTGCAGTCTaGGTAGCGCTGAAAGCGGGCCAGGTTCATGGCGTACATGTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: ESQGRQGPEAPLLAV*VALKAGQVHGVHVG Trigger: TCCAACATGTACGCCATGAACCTGGCCCGCTTTCAGCGCTACCCAGACTGCAAGCAGAGGGGCCTCCGGGCCCTGCCGCCCTTGGCTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR TCA 90 bp | TGTCTTGCTGGAAGAGGTAGCTGGCCTGGGATCCATGGCAGCGCTTaGGCAGGTTCGAGGTGTCCCGGAGAAGAAGAGCGGAGCACTGCA | + |
|
Preference number: 1 (lower is better) Translates to: CLAGRGSWPGIHGSA*AGSRCPGEEERSTA Trigger: TGCAGTGCTCCGCTCTTCTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAGCTACCTCTTCCAGCAAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR CCA 90 bp | TGTGTCCGAGACAGCAGGACGCTCCCACCCCAGGCAGCATCCACATaGAACCACAGTCCGTGTCGCTGGCAAACATCGGCAATTGCATCC | + |
|
Preference number: 1 (lower is better) Translates to: CVRDSRTLPPQAAST*NHSPCRWQTSAIAS Trigger: GGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTCCATGTGGATGCTGCCTGGGGTGGGAGCGTCCTGCTGTCTCGGACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 |
||
| 3UTR CCA 90 bp | GCTCCAGCTCGCCCAGAAGGAAATCTATATCGGCCTGGGCCAGTATaGGGTTGGCCACCACCATTCGGAAGAAGTTGGCCCGGGTCCCAT | + |
|
Preference number: 1 (lower is better) Translates to: APARPEGNLYRPGPV*GWPPPFGRSWPGSH Trigger: ATGGGACCCGGGCCAACTTCTTCCGAATGGTGGTGGCCAACCCCATACTGGCCCAGGCCGATATAGATTTCCTTCTGGGCGAGCTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| 3UTR CCA 90 bp | TGGCCCAGGAGCTCCAGCTCGCCCAGAAGGAAATCTATATCGGCCTaGGCCAGTATGGGGTTGGCCACCACCATTCGGAAGAAGTTGGCC | + |
|
Preference number: 1 (lower is better) Translates to: WPRSSSSPRRKSISA*ASMGLATTIRKKLA Trigger: GGCCAACTTCTTCCGAATGGTGGTGGCCAACCCCATACTGGCCCAGGCCGATATAGATTTCCTTCTGGGCGAGCTGGAGCTCCTGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| 3UTR TCA 90 bp | GCCTCTCCAGGTCCTCAGGGATCATCCTCCCTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGGTGCCAAGTCCCAGAAAAGCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: ASPGPQGSSSLSHQP*PLGHCRCQVPEKQL Trigger: GAGCTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAGGATGATCCCTGAGGACCTGGAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR CCA 90 bp | AGGCCACAGAGTCAGCCATCCACATGGAACCACAGTCCGTGTCGCTaGCAAACATCGGCAATTGCATCCAGGGGGTCAAAGGCCCCTAGC | + |
|
Preference number: 1 (lower is better) Translates to: RPQSQPSTWNHSPCR*QTSAIASRGSKAPS Trigger: GCTAGGGGCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTCCATGTGGATGGCTGACTCTGTGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| 3UTR CCA 90 bp | CTCCTTGAGCACAGGGGCCACCTGAGACAGCCTTTGGCTGTAATCTaGACTCTCCTTCTTCCCCCGAAGGCTGGGAGGCACAAACCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: LLEHRGHLRQPLAVI*TLLLPPKAGRHKPE Trigger: TTCTGGTTTGTGCCTCCCAGCCTTCGGGGGAAGAAGGAGAGTCCAGATTACAGCCAAAGGCTGTCTCAGGTGGCCCCTGTGCTCAAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTGCCCCGCCGCTCCAACCCCTaGCCACCCTGTGCCTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QVPGESKGLVDAPLQPLPRRSNP*PPCAFH Trigger: GTGGAAGGCACAGGGTGGGCAGGGGTTGGAGCGGCG...GGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTACTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCACCAAGTACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCCAAAGGCCTGGTCGATaGGCCGCTCCAACCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: STKYRVRAKAWSMRRSNPQRPGR*AAPTPA Trigger: GGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTG...GGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTACTTGGTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTGCCCACCCCTGGCCTGGGATCCATaGCAGCGCTTGAGCAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: YRVRAKAWSMRRSNPCPPLAWDP*QRLSRF Trigger: GAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAG...GGGTGGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGCCTGGGATCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGGCGGCGAGAAGCTTGTaGGGGTTCCAGGCCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: AGLGSMAALEQVRGVPEKAARSL*GFQATE Trigger: CTCTGTGGCCTGGAACCCTCACAAGCTTCTCGCCGC...CTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGATCCCATCCAGGAGATGCCTGTGTGTCCGAGACAGCAGGACGCTCCCACGCGGCGAGAAGCTTGTaGGGGTTCCAGGCCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SGSHPGDACVSETAGRSHAARSL*GFQATE Trigger: CTCTGTGGCCTGGAACCCTCACAAGCTTCTCGCCGC...GTGGGAGCGTCCTGCTGTCTCGGACACACAGGCATCTCCTGGATGGGATCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGACGCTCCCACCCCAGGCAGCATCCACATGGAACCACAGTCCGTGTCGCTGGCAGCCTCTGCCAGAATaGTCTGCCTCTCCAGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RTLPPQAASTWNHSPCRWQPLPE*SASPGP Trigger: AGGACCTGGAGAGGCAGATCATTCTGGCAGAGGCTG...CCAGCGACACGGACTGTGGTTCCATGTGGATGCTGCCTGGGGTGGGAGCGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 |
||
| 3UTR-3UTR TCA 90 bp | AACCCCTGCCCACCCTGTGCCTTCCACATGAGCCATAGCTTCAGACAGTCCACGGCGGCGAGAAGCTTGTaGGGGTTCCAGGCCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NPCPPCAFHMSHSFRQSTAARSL*GFQATE Trigger: CTCTGTGGCCTGGAACCCTCACAAGCTTCTCGCCGC...CGTGGACTGTCTGAAGCTATGGCTCATGTGGAAGGCACAGGGTGGGCAGGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCCTGGGATCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGAGAGCCCTCAGCCTCTaGCAGAATGATCTGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: AGLGSMAALEQVRGVPEKRALSL*QNDLPL Trigger: GAGAGGCAGATCATTCTGGCAGAGGCTGAGGGCTCT...CTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGATCCCATCCAGGAGATGCCTGTGTGTCCGAGACAGCAGGACGCTCCCACGCTGGAAGAGGTAGCTaGCCTGGGATCCATGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SGSHPGDACVSETAGRSHAGRGS*PGIHGS Trigger: GCTGCCATGGATCCCAGGCCAGCTACCTCTTCCAGC...GTGGGAGCGTCCTGCTGTCTCGGACACACAGGCATCTCCTGGATGGGATCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGAAGAGCGGAGCAGTGAGAGCAAAGGCCTaGTCGATGCGCCGCTCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: SMAALEQVRGVPEKKSGAVRAKA*SMRRSN Trigger: GTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCAC...TGCTCCGCTCTTCTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCCCTAGCACGGTGGTACCAGAGGTGGCACTGACCAGAAATGGCACAGAGCCCTCTGCCAGAATGATCTaGCTCTCCAGGTCCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: APSTVVPEVALTRNGTEPSARMI*LSRSSG Trigger: CCCTGAGGACCTGGAGAGGCAGATCATTCTGGCAGA...GGGCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTACCACCGTGCTAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAGCGGAGCACTGCAGCCCTGCGGCGAGAAGCTTGTGAGGGTTCCAGGCCAGCAAACATCGGCAATTaGATCCAGGGGGTCAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: EERSTAALRREACEGSRPANIGN*IQGVKG Trigger: GCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGC...TGGCCTGGAACCCTCACAAGCTTCTCGCCGCAGGGCTGCAGTGCTCCGCTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CCA 90 bp | CATCCTCCCTCTCTCATCAGCCTTGACCACTCGGACACTGTCGGTGCCAAGTCCCCTCTGCTTGCAGTCTaGGTAGCGCTGAAAGCGGGC | + |
|
Preference number: 2 (lower is better) Translates to: HPPSLISLDHSDTVGAKSPLLAV*VALKAG Trigger: GCCCGCTTTCAGCGCTACCCAGACTGCAAGCAGAGG...GGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR CAA 90 bp | CATCCACATGGAACCACAGTCCGTGTCGCTGGCAAACATCGGCAATaGCATCCAGGGGGTCAAAGGCCCCTAGCACGGTGGTACCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HPHGTTVRVAGKHRQ*HPGGQRPLARWYQR Trigger: CCTCTGGTACCACCGTGCTAGGGGCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTCCATGTGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTCCCTCTCTCATCAGCCTTGACCACTCGGACACTGTCGGTGCCAAGTCCCAGCCTCTGCCAGAATaGTCTGCCTCTCCAGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HPPSLISLDHSDTVGAKSQPLPE*SASPGP Trigger: AGGACCTGGAGAGGCAGATCATTCTGGCAGAGGCTG...GGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR-3UTR GCA 90 bp | GGATCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGAAGAGCGGATCTGCCAGAATGATCTaGCTCTCCAGGTCCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GSMAALEQVRGVPEKKSGSARMI*LSRSSG Trigger: CCCTGAGGACCTGGAGAGGCAGATCATTCTGGCAGA...TCCGCTCTTCTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | TCGGCAATTGCATCCAGGGGGTCAAAGGCCCCTAGCACGGTGGTACCAGAGGTGTCTGCCAGAATGATCTaGCTCTCCAGGTCCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SAIASRGSKAPSTVVPEVSARMI*LSRSSG Trigger: CCCTGAGGACCTGGAGAGGCAGATCATTCTGGCAGA...CACCTCTGGTACCACCGTGCTAGGGGCCTTTGACCCCCTGGATGCAATTGCCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGATCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGAAGAGCAGAGCCCTCAGCCTCTaGCAGAATGATCTGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LGSMAALEQVRGVPEKKSRALSL*QNDLPL Trigger: GAGAGGCAGATCATTCTGGCAGAGGCTGAGGGCTCT...GCTCTTCTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGCCTTGACCACTCGGACACTGTCGGTGCCAAGTCCCAGAAAAGCAGCTCCGGAGGCCCCTCTGCTTaGAGTCTGGGTAGCGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ISLDHSDTVGAKSQKSSSGGPSA*SLGSAE Trigger: TTCAGCGCTACCCAGACTGCAAGCAGAGGGGCCTCC...GGAGCTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCGTACATGTTGGAGATGGAGCCACATACCAGGACAGAAGACCCCATCCCCAGGCACCTCCTCTTCCATaGGCACAAACACGGGGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GVHVGDGATYQDRRPHPQAPPLP*AQTRGQ Trigger: TTGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGC...CTGGGGATGGGGTCTTCTGTCCTGGTATGTGGCTCCATCTCCAACATGTACGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTCCCTCTCTCATCAGCCTTGACCACTCGGACACTGTCGGTGCCAAGTCCGACACTCCTTTGAAGTaGAGAGAGCCAAGGGCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: HPPSLISLDHSDTVGAKSDTPLK*REPRAA Trigger: TGCCGCCCTTGGCTCTCTTCACTTCAAAGGAGTGTC...GGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGCCTTGACCACTCGGACACTGTCGGTGCCAAGTCCCAGAAAAGCAGCTCCTCTGCCAGAATGATCTaGCTCTCCAGGTCCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: ISLDHSDTVGAKSQKSSSSARMI*LSRSSG Trigger: CCCTGAGGACCTGGAGAGGCAGATCATTCTGGCAGA...GGAGCTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR-3UTR GCA 90 bp | CATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTCGCCGCTCCAACCCCTaGCCACCCTGTGCCTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: HYQLKSFPLFNLLHQVPGRRSNP*PPCAFH Trigger: GTGGAAGGCACAGGGTGGGCAGGGGTTGGAGCGGCG...ACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | GAACCACAGTCCGTGTCGCTGGCAAACATCGGCAATTGCATCCAGGGGGTCAAAAGAGCCCTCAGCCTCTaGCAGAATGATCTGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: EPQSVSLANIGNCIQGVKRALSL*QNDLPL Trigger: GAGAGGCAGATCATTCTGGCAGAGGCTGAGGGCTCT...TTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGGCGGCGAGAAGCTTGTaGGGGTTCCAGGCCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SNPSRFLISSTKYRVRAKAARSL*GFQATE Trigger: CTCTGTGGCCTGGAACCCTCACAAGCTTCTCGCCGC...CTTTGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGGCATCCATGGCAGCGCTTaGGCAGGTTCGAGGTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: KSFPLFNLLHQVPGESKGIHGSA*AGSRCP Trigger: GGGACACCTCGAACCTGCTCAAGCGCTGCCATGGAT...GCCTTTGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGGCCTGGCCTGTGCCTTCCACATaGGCCATAGCTTCAGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: PSRFLISSTKYRVRAKAWPVPST*AIASDS Trigger: ACTGTCTGAAGCTATGGCTCATGTGGAAGGCACAGG...CCAGGCCTTTGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGACGCGGCGGCCACACTaGACCACTTTGTCTCCGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SNPSRFLISSTKYRVRAKTRRPH*TTLSPV Trigger: CACCGGAGACAAAGTGGTGCAGTGTGGCCGCCGCGT...CTTTGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CCA 90 bp | AATATCCCGTTCCAGGGAAAACTGCTGACCTTTGGCACAGTTCCACCGACAGCCGGGAGAGTGAGTGTGTaGGAGCACACACAGTCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: NIPFQGKLLTFGTVPPTAGRVSV*EHTQSR Trigger: CCTTGACTGTGTGTGCTCCCACACACTCACTCTCCC...GGCTGTCGGTGGAACTGTGCCAAAGGTCAGCAGTTTTCCCTGGAACGGGATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023805.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCCTTGACCACTCGGACACTGTCGGTGCCAAGTCCCAGAAAAGCAGCTCCCTCATGGCGTACATGTTaGAGATGGAGCCACATACCA | + |
|
Preference number: 2 (lower is better) Translates to: SALTTRTLSVPSPRKAAPSWRTC*RWSHIP Trigger: TGGTATGTGGCTCCATCTCCAACATGTACGCCATGA...GGGAGCTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGACGCGGCGGCCACACTaGACCACTTTGTCTCCGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ITNSNPSRFLISSTKYRVTRRPH*TTLSPV Trigger: CACCGGAGACAAAGTGGTGCAGTGTGGCCGCCGCGT...CACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGGCTGGAAGAGGTAGCTaGCCTGGGATCCATGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SNPSRFLISSTKYRVRAKAGRGS*PGIHGS Trigger: GCTGCCATGGATCCCAGGCCAGCTACCTCTTCCAGC...CTTTGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGAACCCATACGCAGAGCTTGGGTaGGGCAGAGAGCAGAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: EHTQSRPLFPRKVDFENPYAELG*GREQKQ Trigger: CTGCTTCTGCTCTCTGCCCCACCCAAGCTCTGCGTA...TGGGTTCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGATACGCAGAGCTTGGGTaGGGCAGAGAGCAGAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CGSTHSQGHCFLERSILRYAELG*GREQKQ Trigger: CTGCTTCTGCTCTCTGCCCCACCCAAGCTCTGCGTA...TCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGCTGGCCTGGGATCCATaGCAGCGCTTGAGCAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SITNSNPSRFLISSTKYRLAWDP*QRLSRF Trigger: GAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAG...CCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CCA 90 bp | CACGTTGACGAACTCGGGCTCCATTACCAACTCAAATCCTTCCCGCTTTTTAATGTGAGAGCAAAGGCCTaGTCGATGCGCCGCTCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: HVDELGLHYQLKSFPLFNVRAKA*SMRRSN Trigger: GTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCAC...ATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGCCCGAGTTCGTCAACGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR TCA 90 bp | CACGTTGACGAACTCGGGCTCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCAGCCTCTGCCAGAATaGTCTGCCTCTCCAGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HVDELGLHYQLKSFPLFNQPLPE*SASPGP Trigger: AGGACCTGGAGAGGCAGATCATTCTGGCAGAGGCTG...ATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGCCCGAGTTCGTCAACGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCATACCAGAGGTGGCACTaGCCAGAAATGGCACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: NSNPSRFLISSTKYRVRAYQRWH*PEMAQS Trigger: GCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTA...TGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTAGACTACGCAGAGCTTaGGTGGGGCAGAGAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SVWEHTQSRPLFPRKVDFRLRRA*VGQRAE Trigger: TTCTGCTCTCTGCCCCACCCAAGCTCTGCGTAGTCT...AAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CCA 90 bp | AACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAACAGAGTCAGCCCTCTaGATCCCATCCAGGAGATGC | + |
|
Preference number: 2 (lower is better) Translates to: NSNPSRFLISSTKYRVRATESAL*IPSRRC Trigger: GCATCTCCTGGATGGGATCCAGAGGGCTGACTCTGT...TGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCACCTGTGCCTTCCACATaGGCCATAGCTTCAGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: NSNPSRFLISSTKYRVRAPVPST*AIASDS Trigger: ACTGTCTGAAGCTATGGCTCATGTGGAAGGCACAGG...TGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTTACCAGAGGTGGCACTaGCCAGAAATGGCACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: HYQLKSFPLFNLLHQVPGYQRWH*PEMAQS Trigger: GCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTA...ACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTAATCCCATCCAGGAGATaGCTGTGTGTCCGAGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: GLHYQLKSFPLFNLLHQVIPSRR*LCVRDS Trigger: GCTGTCTCGGACACACAGGCATCTCCTGGATGGGAT...TACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGCTCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTAGCAAACATCGGCAATTaGATCCAGGGGGTCAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: GLHYQLKSFPLFNLLHQVANIGN*IQGVKG Trigger: GCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGC...TACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTGGTAGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCTACGCAGAGCTTGGGTaGGGCAGAGAGCAGAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: MLVVKVCAPVPNLIKAYFYAELG*GREQKQ Trigger: CTGCTTCTGCTCTCTGCCCCACCCAAGCTCTGCGTA...GAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACTACCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACAAGACTACGCAGAGCTTaGGTGGGGCAGAGAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VKVCAPVPNLIKAYFVRTRLRRA*VGQRAE Trigger: TTCTGCTCTCTGCCCCACCCAAGCTCTGCGTAGTCT...TGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTTCCACCGACAGCCTTTTCCTATGTGATTTTTAGCCTAACTCAGATACTGCAGCCAATACTTAGCTaGGAGAGTGAGTGTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: TVPPTAFSYVIFSLTQILQPILS*ESECVG Trigger: TCCCACACACTCACTCTCCCAGCTAAGTATTGGCTG...CAGTATCTGAGTTAGGCTAAAAATCACATAGGAAAAGGCTGTCGGTGGAACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023805.3 |
||
| 3UTR-3UTR CCA 90 bp | GTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACACAGCCAATACTTAGCTaGGAGAGTGAGTGTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VKVCAPVPNLIKAYFVRTQPILS*ESECVG Trigger: TCCCACACACTCACTCTCCCAGCTAAGTATTGGCTG...TGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR CCA 72 bp | GGGCGGCAGGGCCCGGAGGCCCCTCTGCTTGCAGTCTaGGTAGCGCTGAAAGCGGGCCAGGTTCATGGCGTA | + |
|
Preference number: 3 (lower is better) Translates to: GRQGPEAPLLAV*VALKAGQVHGV Trigger: TACGCCATGAACCTGGCCCGCTTTCAGCGCTACCCAGACTGCAAGCAGAGGGGCCTCCGGGCCCTGCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| 3UTR CCA 72 bp | ATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGGCCTaGTCGATGCGCCGCTCCAACCCCTGCCCACCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ISSTKYRVRAKA*SMRRSNPCPPC Trigger: ACAGGGTGGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTACTTGGTGGAGGAGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR GCA 72 bp | AGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTaGCCACCCTGTGCCTTCCACATGAGCCATAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RAKAWSMRRSNP*PPCAFHMSHSF Trigger: GAAGCTATGGCTCATGTGGAAGGCACAGGGTGGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR CCA 72 bp | GACAGCAGGACGCTCCCACCCCAGGCAGCATCCACATaGAACCACAGTCCGTGTCGCTGGCAAACATCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: DSRTLPPQAAST*NHSPCRWQTSA Trigger: TGCCGATGTTTGCCAGCGACACGGACTGTGGTTCCATGTGGATGCTGCCTGGGGTGGGAGCGTCCTGCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 |
||
| 3UTR TCA 72 bp | CAAAGGCCCCTAGCACGGTGGTACCAGAGGTGGCACTaGCCAGAAATGGCACAGAGCCCTCAGCCTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QRPLARWYQRWH*PEMAQSPQPLP Trigger: TGGCAGAGGCTGAGGGCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTACCACCGTGCTAGGGGCCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCACCAAGTACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCATCGTAGAACTTGTCTaGCTGGAAGAGGTAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: STKYRVRAKAWSMRRSNPIVELV*LEEVAG Trigger: GCCAGCTACCTCTTCCAGCAAGACAAGTTCTACGAT...GGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTACTTGGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR GCA 72 bp | AATGGCACAGAGCCCTCAGCCTCTGCCAGAATGATCTaGCTCTCCAGGTCCTCAGGGATCATCCTCCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: NGTEPSASARMI*LSRSSGIILPL Trigger: GAGAGGGAGGATGATCCCTGAGGACCTGGAGAGGCAGATCATTCTGGCAGAGGCTGAGGGCTCTGTGCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR GCA 72 bp | GGCACTGACCAGAAATGGCACAGAGCCCTCAGCCTCTaGCAGAATGATCTGCCTCTCCAGGTCCTCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GTDQKWHRALSL*QNDLPLQVLRD Trigger: ATCCCTGAGGACCTGGAGAGGCAGATCATTCTGGCAGAGGCTGAGGGCTCTGTGCCATTTCTGGTCAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR CCA 72 bp | GAAGGAAATCTATATCGGCCTGGGCCAGTATGGGGTTaGCCACCACCATTCGGAAGAAGTTGGCCCGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EGNLYRPGPVWG*PPPFGRSWPGS Trigger: GGACCCGGGCCAACTTCTTCCGAATGGTGGTGGCCAACCCCATACTGGCCCAGGCCGATATAGATTTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| 3UTR CCA 72 bp | AGCTCCAGCTCGCCCAGAAGGAAATCTATATCGGCCTaGGCCAGTATGGGGTTGGCCACCACCATTCGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSSPRRKSISA*ASMGLATTIRK Trigger: CTTCCGAATGGTGGTGGCCAACCCCATACTGGCCCAGGCCGATATAGATTTCCTTCTGGGCGAGCTGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGCCATAGCTTCAGACAGTCCACGCGGCGGCCACACTGCACCACTTTGTCTGGCAAACATCGGCAATaGCATCCAGGGGGTCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MSHSFRQSTRRPHCTTLSGKHRQ*HPGGQR Trigger: CCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCC...AGACAAAGTGGTGCAGTGTGGCCGCCGCGTGGACTGTCTGAAGCTATGGCTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR CCA 72 bp | CAGGCAGCATCCACATGGAACCACAGTCCGTGTCGCTaGCAAACATCGGCAATTGCATCCAGGGGGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QAASTWNHSPCR*QTSAIASRGSK Trigger: CTTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTCCATGTGGATGCTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTGAGACTACGCAGAGCTaGGGTGGGGCAGAGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILSWESECVGAHTVKATVETTQS*GGAESR Trigger: TCTGCTCTCTGCCCCACCCAAGCTCTGCGTAGTCTC...AACAGTGGCCTTGACTGTGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACTGCACCACTTTGTCTCCGGTGTCCAGAGCCACATCGTAGAACTTGTCTTGCCACACTGCACCACTTaGTCTCCGGTGTCCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TLHHFVSGVQSHIVELVLPHCTT*SPVSRA Trigger: GGCTCTGGACACCGGAGACAAAGTGGTGCAGTGTGG...CAAGACAAGTTCTACGATGTGGCTCTGGACACCGGAGACAAAGTGGTGCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR CCA 72 bp | AGTCAGCCATCCACATGGAACCACAGTCCGTGTCGCTaGCAAACATCGGCAATTGCATCCAGGGGGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQPSTWNHSPCR*QTSAIASRGSK Trigger: CTTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTCCATGTGGATGGCTGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACACGTTGACGAACTCGGGCTCCATTACCAACTCAAATCCTTCCCGCTTTTTGATCCATGGCAGCGCTaGAGCAGGTTCGAGGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: AHVDELGLHYQLKSFPLFDPWQR*SRFEVS Trigger: GGACACCTCGAACCTGCTCAAGCGCTGCCATGGATC...AAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGCCCGAGTTCGTCAACGTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR TCA 72 bp | CCCGAAGGCTGGGAGGCACAAACCAGAAGCACACGTTaGCGAACTCGGGCTCCATTACCAACTCAAATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PEGWEAQTRSTR*RTRAPLPTQIL Trigger: AAGGATTTGAGTTGGTAATGGAGCCCGAGTTCGTCAACGTGTGCTTCTGGTTTGTGCCTCCCAGCCTTCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR CCA 72 bp | CCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTaGGAGCACACACAGTCAAGGCCACTGTTTCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PDSQYLAGRVSV*EHTQSRPLFPR Trigger: TCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACGATCCATGGCAGCGCTaGAGCAGGTTCGAGGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSITNSNPSRFLISSTKYDPWQR*SRFEVS Trigger: GGACACCTCGAACCTGCTCAAGCGCTGCCATGGATC...GTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGCCACACTGCACCACTTaGTCTCCGGTGTCCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SITNSNPSRFLISSTKYRPHCTT*SPVSRA Trigger: GGCTCTGGACACCGGAGACAAAGTGGTGCAGTGTGG...CCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACTGCACCACTTTGTCTCCGGTGTCCAGAGCCACATCGTAGAACTTGTCTTGATCGTAGAACTTGTCTaGCTGGAAGAGGTAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TLHHFVSGVQSHIVELVLIVELV*LEEVAG Trigger: GCCAGCTACCTCTTCCAGCAAGACAAGTTCTACGAT...CAAGACAAGTTCTACGATGTGGCTCTGGACACCGGAGACAAAGTGGTGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGGGCAAACATCGGCAATaGCATCCAGGGGGTCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SNPSRFLISSTKYRVRAKGKHRQ*HPGGQR Trigger: CCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCC...CTTTGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| 3UTR TCA 72 bp | GGGAATAACCTAATATCCCGTTCCAGGGAAAACTGCTaGCCTTTGGCACAGTTCCACCGACAGCCTTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GNNLISRSRENC*PLAQFHRQPFP Trigger: AGGAAAAGGCTGTCGGTGGAACTGTGCCAAAGGTCAGCAGTTTTCCCTGGAACGGGATATTAGGTTATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023805.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACAGAGACTACGCAGAGCTaGGGTGGGGCAGAGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VKVCAPVPNLIKAYFVRTETTQS*GGAESR Trigger: TCTGCTCTCTGCCCCACCCAAGCTCTGCGTAGTCTC...TGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CAA 90 bp | TATTTCGTAAGAACATACTGTAGTGTGTTTAGACACCTTCCTGACAGCCAATACGAGACTACGCAGAGCTaGGGTGGGGCAGAGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YFVRTYCSVFRHLPDSQYETTQS*GGAESR Trigger: TCTGCTCTCTGCCCCACCCAAGCTCTGCGTAGTCTC...GTATTGGCTGTCAGGAAGGTGTCTAAACACACTACAGTATGTTCTTACGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGGTAGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCCTAGAAAGGTCGATTTaGAGAACCCAGGAGACTACG | + |
|
Preference number: 3 (lower is better) Translates to: MLVVKVCAPVPNLIKAYFLERSI*RTQETT Trigger: CGTAGTCTCCTGGGTTCTCAAAATCGACCTTTCTAG...GAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACTACCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACACTAGAAAGGTCGATTTaGAGAACCCAGGAGACTACG | + |
|
Preference number: 3 (lower is better) Translates to: VKVCAPVPNLIKAYFVRTLERSI*RTQETT Trigger: CGTAGTCTCCTGGGTTCTCAAAATCGACCTTTCTAG...TGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| CDS-3UTR CCA 90 bp | GCGGCAGGGCCCGGAGGCCCCTCTGCTTGCAGTCTGGGTAGCGCTGAAAGCGGGCCTTCTCAGAGGCACTaGTCCCCTTCAGAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGPGGPSACSLGSAESGPSQRH*SPSEWP Trigger: AGGCCATTCTGAAGGGGACCAGTGCCTCTGAGAAGG...CCCGCTTTCAGCGCTACCCAGACTGCAAGCAGAGGGGCCTCCGGGCCCTGCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTGCCCCCTCTGCTTGCAGTCTaGGTAGCGCTGAAAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVPGESKGLVDAPLQPLPPLLAV*VALKAG Trigger: GCCCGCTTTCAGCGCTACCCAGACTGCAAGCAGAGG...GGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTACTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTGCCCCTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QVPGESKGLVDAPLQPLPLSHQP*PLGHCR Trigger: CCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAG...GGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS-3UTR GCA 90 bp | GTACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTGCCCACCAGAGCCCTCAGCCTCTaGCAGAATGATCTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPGESKGLVDAPLQPLPTRALSL*QNDLPL Trigger: GAGAGGCAGATCATTCTGGCAGAGGCTGAGGGCTCT...GGTGGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS-3UTR CCA 90 bp | GTACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTGCCCACCTCATGGCGTACATGTTaGAGATGGAGCCACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPGESKGLVDAPLQPLPTSWRTC*RWSHQD Trigger: GTCCTGGTGGCTCCATCTCCAACATGTACGCCATGA...GGTGGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CCA 90 bp | TACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTGCCCACCCTCATGGCGTACATGTTaGAGATGGAGCCACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YRVRAKAWSMRRSNPCPPSWRTC*RWSHQD Trigger: GTCCTGGTGGCTCCATCTCCAACATGTACGCCATGA...GGGTGGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCTGGGATCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGTACCAGAGGTGGCACTaGCCAGAAATGGCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLGSMAALEQVRGVPEKYQRWH*PEMAQS Trigger: GCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTA...CTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS-3UTR GCA 90 bp | CTCCACCAAGTACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTCGGACACTGTCGGTaGCAAGTCCCAGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHQVPGESKGLVDAPLQPLGHCR*QVPEKQ Trigger: CTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAG...GGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTACTTGGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| 3UTR CAA 72 bp | GGAACCACAGTCCGTGTCGCTGGCAAACATCGGCAATaGCATCCAGGGGGTCAAAGGCCCCTAGCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTTVRVAGKHRQ*HPGGQRPLARW Trigger: CCACCGTGCTAGGGGCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 ENSMUST00000231048.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGATCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGAAGACAGCCTCTGCCAGAATaGTCTGCCTCTCCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AWDPWQRLSRFEVSRRRRQPLPE*SASPGP Trigger: AGGACCTGGAGAGGCAGATCATTCTGGCAGAGGCTG...TCTTCTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATCCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCTGCCCACCCTGTGCCTTCCACATGAGCCATAGCTTCAGACAGTCCACGGGAGGCCCCTCTGCTTaGAGTCTGGGTAGCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NPCPPCAFHMSHSFRQSTGGPSA*SLGSAE Trigger: TTCAGCGCTACCCAGACTGCAAGCAGAGGGGCCTCC...CGTGGACTGTCTGAAGCTATGGCTCATGTGGAAGGCACAGGGTGGGCAGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| CDS-3UTR GCA 90 bp | GCCATAGCTTCAGACAGTCCACGCGGCGGCCACACTGCACCACTTTGTCTCCGGCTCGGACACTGTCGGTaGCAAGTCCCAGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIASDSPRGGHTAPLCLRLGHCR*QVPEKQ Trigger: CTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAG...CCGGAGACAAAGTGGTGCAGTGTGGCCGCCGCGTGGACTGTCTGAAGCTATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| CDS-3UTR GCA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACCGCCGCTCCAACCCCTaGCCACCCTGTGCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHRRSNP*PPCAFH Trigger: GTGGAAGGCACAGGGTGGGCAGGGGTTGGAGCGGCG...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | TGTCGCTGGCAAACATCGGCAATTGCATCCAGGGGGTCAAAGGCCCCTAGCACGCTGAGAAGAGCTGGTTaGAGAACCGGGGGTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRWQTSAIASRGSKAPSTLRRAG*RTGGDQ Trigger: CTGGTCACCCCCGGTTCTTCAACCAGCTCTTCTCAG...CGTGCTAGGGGCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGATCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGAAGAGCGACACTCCTTTGAAGTaGAGAGAGCCAAGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSMAALEQVRGVPEKKSDTPLK*REPRAA Trigger: TGCCGCCCTTGGCTCTCTTCACTTCAAAGGAGTGTC...GCTCTTCTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCAAAGGCCCCTAGCACGGTGGTACCAGAGGTGGCACTGACCAGAAATGGCCTCGGACACTGTCGGTaGCAAGTCCCAGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSKAPSTVVPEVALTRNGLGHCR*QVPEKQ Trigger: CTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAG...GCCATTTCTGGTCAGTGCCACCTCTGGTACCACCGTGCTAGGGGCCTTTGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230342.2 ENSMUST00000231048.2 |
||
| CDS-3UTR GCA 90 bp | AATATCCCGTTCCAGGGAAAACTGCTGACCTTTGGCACAGTTCCACCGACAGCCCAAAGGCCTGGTCGATaGGCCGCTCCAACCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NIPFQGKLLTFGTVPPTAQRPGR*AAPTPA Trigger: GGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTG...GGCTGTCGGTGGAACTGTGCCAAAGGTCAGCAGTTTTCCCTGGAACGGGATATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023805.3 |
||
| CDS-3UTR GCA 90 bp | CACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACAAAGGCCTGGTCGATaGGCCGCTCCAACCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLPDSQYLAGRVSVWEHTQRPGR*AAPTPA Trigger: GGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTG...TGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGAAGAGCGGAGCACTGCCTTCTCAGAGGCACTaGTCCCCTTCAGAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MAALEQVRGVPEKKSGALPSQRH*SPSEWP Trigger: AGGCCATTCTGAAGGGGACCAGTGCCTCTGAGAAGG...CAGTGCTCCGCTCTTCTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CCA 90 bp | GATCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGAAGAGCGGAGCCTTCTCAGAGGCACTaGTCCCCTTCAGAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPWQRLSRFEVSRRRRAEPSQRH*SPSEWP Trigger: AGGCCATTCTGAAGGGGACCAGTGCCTCTGAGAAGG...CTCCGCTCTTCTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGTAGCCCAGCTCTGTAGTCCAGGCTGGCCTCAAACTGGCTGCTTCTGTCCTCTGCTTGCAGTCTaGGTAGCGCTGAAAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCVAQLCSPGWPQTGCFCPLLAV*VALKAG Trigger: GCCCGCTTTCAGCGCTACCCAGACTGCAAGCAGAGG...ACAGAAGCAGCCAGTTTGAGGCCAGCCTGGACTACAGAGCTGGGCTACACAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGTGTAGCCCAGCTCTGTAGTCCAGGCTGGCCTCAAACTGGCTGCTTCTGTCAGCCTCTGCCAGAATaGTCTGCCTCTCCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCVAQLCSPGWPQTGCFCQPLPE*SASPGP Trigger: AGGACCTGGAGAGGCAGATCATTCTGGCAGAGGCTG...ACAGAAGCAGCCAGTTTGAGGCCAGCCTGGACTACAGAGCTGGGCTACACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | AATATCCCGTTCCAGGGAAAACTGCTGACCTTTGGCACAGTTCCACCGACAGCCACGCGGCGGCCACACTaGACCACTTTGTCTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NIPFQGKLLTFGTVPPTATRRPH*TTLSPV Trigger: CACCGGAGACAAAGTGGTGCAGTGTGGCCGCCGCGT...GGCTGTCGGTGGAACTGTGCCAAAGGTCAGCAGTTTTCCCTGGAACGGGATATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023805.3 |
||
| CDS-3UTR GCA 90 bp | ATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTCAAAGGCCTGGTCGATaGGCCGCTCCAACCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSWESECVGAHTVKATVQRPGR*AAPTPA Trigger: GGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTG...AACAGTGGCCTTGACTGTGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR CAA 72 bp | AGGTCCTCAGGGATCATCCTCCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCGGTGCCAAGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSSGIILPLSSA*TTRTLSVPSPR Trigger: TCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAGGATGATCCCTGAGGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGGCACTGACCAGAAATGGCACAGAGCCCTCAGCCTCTGCCAGAATGATCTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGGTDQKWHRALSLCQNDLSHQP*PLGHCR Trigger: CCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAG...ATCATTCTGGCAGAGGCTGAGGGCTCTGTGCCATTTCTGGTCAGTGCCACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230342.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGAGTCAGCCATCCACATGGAACCACAGTCCGTGTCGCTGGCAAACATCGCTACCTCCTTTGAAGTaGAGAGAGCCAAGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQSQPSTWNHSPCRWQTSLPPLK*REPRAA Trigger: TGCCGCCCTTGGCTCTCTTCACTTCAAAGGAGGTAG...CGATGTTTGCCAGCGACACGGACTGTGGTTCCATGTGGATGGCTGACTCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS-3UTR GCA 90 bp | ACGGTGGTACCAGAGGTGGCACTGACCAGAAATGGCACAGAGCCCTCAGCCTCTTCCAAGTCCAGCAGCTaGTTGAGTTCTTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVVPEVALTRNGTEPSASSKSSS*LSSSGS Trigger: GGAGCCTGAAGAACTCAAGCAGCTGCTGGACTTGGA...AGAGGCTGAGGGCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTACCACCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR GCA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACGGAGGCCCCTCTGCTTaGAGTCTGGGTAGCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHGGPSA*SLGSAE Trigger: TTCAGCGCTACCCAGACTGCAAGCAGAGGGGCCTCC...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTAGCCCAGCTCTGTAGTCCAGGCTGGCCTCAAACTGGCTGCTTCTGTTCTGCCAGAATGATCTaGCTCTCCAGGTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCVAQLCSPGWPQTGCFCSARMI*LSRSSG Trigger: CCCTGAGGACCTGGAGAGGCAGATCATTCTGGCAGA...ACAGAAGCAGCCAGTTTGAGGCCAGCCTGGACTACAGAGCTGGGCTACACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTCGCCGCTCCAACCCCTaGCCACCCTGTGCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVWEHTQSRPLFPRKVDFRRSNP*PPCAFH Trigger: GTGGAAGGCACAGGGTGGGCAGGGGTTGGAGCGGCG...AAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCTAGCACGGTGGTACCAGAGGTGGCACTGACCAGAAATGGCACAGAGCCCTGGTCCCCTTCAGAATaGCCTCATCTACAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: APSTVVPEVALTRNGTEPWSPSE*PHLQQS Trigger: GGATTGTTGTAGATGAGGCCATTCTGAAGGGGACCA...GGGCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTACCACCGTGCTAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCTCTGTGTAGCCCAGCTCTGTAGTCCAGGCTGGCCTCAAACTGGCTGCCCTTCTCAGAGGCACTaGTCCCCTTCAGAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFLCVAQLCSPGWPQTGCPSQRH*SPSEWP Trigger: AGGCCATTCTGAAGGGGACCAGTGCCTCTGAGAAGG...GCAGCCAGTTTGAGGCCAGCCTGGACTACAGAGCTGGGCTACACAGAGAAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACCACTTTGTCTCCGGTGTCCAGAGCCACATCGTAGAACTTGTCTTGCTGCCTCTGCTTGCAGTCTaGGTAGCGCTGAAAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHHFVSGVQSHIVELVLLPLLAV*VALKAG Trigger: GCCCGCTTTCAGCGCTACCCAGACTGCAAGCAGAGG...CAGCAAGACAAGTTCTACGATGTGGCTCTGGACACCGGAGACAAAGTGGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACAGCTGGAAGAGGTAGCTaGCCTGGGATCCATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPDSQYLAGRVSVWEHTAGRGS*PGIHGS Trigger: GCTGCCATGGATCCCAGGCCAGCTACCTCTTCCAGC...TGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACGTGAGAGCAAAGGCCTaGTCGATGCGCCGCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHVRAKA*SMRRSN Trigger: GTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCAC...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| 3UTR CAA 72 bp | AGAAGGAAATCTATATCGGCCTGGGCCAGTATGGGGTaGGCCACCACCATTCGGAAGAAGTTGGCCCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRKSISAWASMG*ATTIRKKLARV Trigger: GACCCGGGCCAACTTCTTCCGAATGGTGGTGGCCAACCCCATACTGGCCCAGGCCGATATAGATTTCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| CDS-3UTR TCA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACCTGAGAAGAGCTGGTTaGAGAACCGGGGGTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHLRRAG*RTGGDQ Trigger: CTGGTCACCCCCGGTTCTTCAACCAGCTCTTCTCAG...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | CACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACAGCACCTCCTCTTCCATaGGCACAAACACGGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLPDSQYLAGRVSVWEHTAPPLP*AQTRGQ Trigger: TTGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGC...TGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACCTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHLSHQP*PLGHCR Trigger: CCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAG...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACCAGCCTCTGCCAGAATaGTCTGCCTCTCCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHQPLPE*SASPGP Trigger: AGGACCTGGAGAGGCAGATCATTCTGGCAGAGGCTG...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | TACTGTAGTGTGTTTAGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGCAGCGCTCCAGGATCTaGTCCCGGGACTCGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YCSVFRHLPDSQYLAGRVQRSRI*SRDSPW Trigger: CCAGGGCGAGTCCCGGGAGCAGATCCTGGAGCGCTG...CACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCTAAACACACTACAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTAGCCCAGCTCTGTAGTCCAGGCTGGCCTCAAACTGGCTGCTTCTGTGCAAACATCGGCAATTaGATCCAGGGGGTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCVAQLCSPGWPQTGCFCANIGN*IQGVKG Trigger: GCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGC...ACAGAAGCAGCCAGTTTGAGGCCAGCCTGGACTACAGAGCTGGGCTACACAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| 3UTR CAA 72 bp | CCCCGAAGGCTGGGAGGCACAAACCAGAAGCACACGTaGACGAACTCGGGCTCCATTACCAACTCAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRRLGGTNQKHT*TNSGSITNSNP Trigger: AGGATTTGAGTTGGTAATGGAGCCCGAGTTCGTCAACGTGTGCTTCTGGTTTGTGCCTCCCAGCCTTCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR TCA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACTACCAGAGGTGGCACTaGCCAGAAATGGCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHYQRWH*PEMAQS Trigger: GCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTA...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | CACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGAACCCAGGAGCGGCGAGAAGCTTGTaGGGGTTCCAGGCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTQSRPLFPRKVDFENPGAARSL*GFQATE Trigger: CTCTGTGGCCTGGAACCCTCACAAGCTTCTCGCCGC...TCCTGGGTTCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTTTAGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTCACCATGCGCTCCTTaGGCACAGGGGCCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVFRHLPDSQYLAGRVSVSPCAP*AQGPPE Trigger: CTCAGGTGGCCCCTGTGCTCAAGGAGCGCATGGTGA...CACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCTAAACACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000231029.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTTCACCATGCGCTCCTTaGGCACAGGGGCCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVWEHTQSRPLFPRKVDFSPCAP*AQGPPP Trigger: TGGAGGTGGCCCCTGTGCTCAAGGAGCGCATGGTGA...AAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGGCCTGGTCCAAGTCCAGCAGCTaGTTGAGTTCTTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSRFLISSTKYRVRAKAWSKSSS*LSSSGS Trigger: GGAGCCTGAAGAACTCAAGCAGCTGCTGGACTTGGA...CCAGGCCTTTGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR GCA 90 bp | CACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACTCGGACACTGTCGGTaGCAAGTCCCAGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLPDSQYLAGRVSVWEHTLGHCR*QVPEKQ Trigger: CTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAG...TGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACAGAGCCCTCAGCCTCTaGCAGAATGATCTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHRALSL*QNDLPL Trigger: GAGAGGCAGATCATTCTGGCAGAGGCTGAGGGCTCT...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | AATATCCCGTTCCAGGGAAAACTGCTGACCTTTGGCACAGTTCCACCGACAGCCATCCCATCCAGGAGATaGCTGTGTGTCCGAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NIPFQGKLLTFGTVPPTAIPSRR*LCVRDS Trigger: GCTGTCTCGGACACACAGGCATCTCCTGGATGGGAT...GGCTGTCGGTGGAACTGTGCCAAAGGTCAGCAGTTTTCCCTGGAACGGGATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023805.3 |
||
| CDS-3UTR CCA 90 bp | CACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACCTTCTCAGAGGCACTaGTCCCCTTCAGAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLPDSQYLAGRVSVWEHTPSQRH*SPSEWP Trigger: AGGCCATTCTGAAGGGGACCAGTGCCTCTGAGAAGG...TGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAGACAGCCTTTGGCTGTAATCTGGACTCTCCTTCTTCCCCCGAAGGCTGGCGTACATGTTGGAGATaGAGCCACCAGGACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PETAFGCNLDSPSSPEGWRTCWR*SHQDRR Trigger: TCTTCTGTCCTGGTGGCTCCATCTCCAACATGTACG...CCAGCCTTCGGGGGAAGAAGGAGAGTCCAGATTACAGCCAAAGGCTGTCTCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCTCTGTGTAGCCCAGCTCTGTAGTCCAGGCTGGCCTCAAACTGGCTGCGGTAGCCAATCATCATaGTCCCCTTCTTCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QFLCVAQLCSPGWPQTGCGSQSS*SPSSPC Trigger: GCATGGTGAAGAAGGGGACCATGATGATTGGCTACC...GCAGCCAGTTTGAGGCCAGCCTGGACTACAGAGCTGGGCTACACAGAGAAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| CDS-3UTR TCA 90 bp | ATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTGACACTCCTTTGAAGTaGAGAGAGCCAAGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILSWESECVGAHTVKATVDTPLK*REPRAA Trigger: TGCCGCCCTTGGCTCTCTTCACTTCAAAGGAGTGTC...AACAGTGGCCTTGACTGTGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | ATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTTACCAGAGGTGGCACTaGCCAGAAATGGCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILSWESECVGAHTVKATVYQRWH*PEMAQS Trigger: GCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTA...AACAGTGGCCTTGACTGTGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGAATCCATGGCAGCGCTTaGGCAGGTTCGAGGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CGSTHSQGHCFLERSILRIHGSA*AGSRCP Trigger: GGGACACCTCGAACCTGCTCAAGCGCTGCCATGGAT...TCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | ATGCTGGTAGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCCAGCGCTCCAGGATCTaGTCCCGGGACTCGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLVVKVCAPVPNLIKAYFQRSRI*SRDSPW Trigger: CCAGGGCGAGTCCCGGGAGCAGATCCTGGAGCGCTG...GAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACTACCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | AACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAGGAGGCCCCTCTGCTTaGAGTCTGGGTAGCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NSNPSRFLISSTKYRVRAGGPSA*SLGSAE Trigger: TTCAGCGCTACCCAGACTGCAAGCAGAGGGGCCTCC...TGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGATCATCCTCCCTCTCTCATCAGCCTTGACCACTCGGACACTGTCGGTGTGGTCCCCTTCAGAATaGCCTCATCTACAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGIILPLSSALTTRTLSVWSPSE*PHLQQS Trigger: GGATTGTTGTAGATGAGGCCATTCTGAAGGGGACCA...CACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAGGATGATCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGTAGCCCAGCTCTGTAGTCCAGGCTGGCCTCAAACTGGCTGCTTCTGTTGGTCCCCTTCAGAATaGCCTCATCTACAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LCVAQLCSPGWPQTGCFCWSPSE*PHLQQS Trigger: GGATTGTTGTAGATGAGGCCATTCTGAAGGGGACCA...ACAGAAGCAGCCAGTTTGAGGCCAGCCTGGACTACAGAGCTGGGCTACACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | GGAACCACAGTCCGTGTCGCTGGCAAACATCGGCAATTGCATCCAGGGGGTCAATGGTCCCCTTCAGAATaGCCTCATCTACAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GTTVRVAGKHRQLHPGGQWSPSE*PHLQQS Trigger: GGATTGTTGTAGATGAGGCCATTCTGAAGGGGACCA...TTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CCA 90 bp | GAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGAACCCACTGGCCTGGGATCCATaGCAGCGCTTGAGCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EHTQSRPLFPRKVDFENPLAWDP*QRLSRF Trigger: GAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAG...TGGGTTCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | CACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGAACCCAGGAGCTGGAAGAGGTAGCTaGCCTGGGATCCATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTQSRPLFPRKVDFENPGAGRGS*PGIHGS Trigger: GCTGCCATGGATCCCAGGCCAGCTACCTCTTCCAGC...TCCTGGGTTCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTTTAGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGCTGAGAAGAGCTGGTTaGAGAACCGGGGGTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVFRHLPDSQYLAGRVSVLRRAG*RTGGDQ Trigger: CTGGTCACCCCCGGTTCTTCAACCAGCTCTTCTCAG...CACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCTAAACACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | ATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTTCCAAGTCCAGCAGCTaGTTGAGTTCTTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSWESECVGAHTVKATVSKSSS*LSSSGS Trigger: GGAGCCTGAAGAACTCAAGCAGCTGCTGGACTTGGA...AACAGTGGCCTTGACTGTGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACGTACATGTTGGAGATaGAGCCACCAGGACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLPDSQYLAGRVSVWEHTRTCWR*SHQDRR Trigger: TCTTCTGTCCTGGTGGCTCCATCTCCAACATGTACG...TGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACCACTTTGTCTCCGGTGTCCAGAGCCACATCGTAGAACTTGTCTTGCTGCGTACATGTTGGAGATaGAGCCACCAGGACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHHFVSGVQSHIVELVLLRTCWR*SHQDRR Trigger: TCTTCTGTCCTGGTGGCTCCATCTCCAACATGTACG...CAGCAAGACAAGTTCTACGATGTGGCTCTGGACACCGGAGACAAAGTGGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CCA 90 bp | ATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTTCATGGCGTACATGTTaGAGATGGAGCCACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILSWESECVGAHTVKATVSWRTC*RWSHQD Trigger: GTCCTGGTGGCTCCATCTCCAACATGTACGCCATGA...AACAGTGGCCTTGACTGTGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGACAGAGTCAGCCCTCTaGATCCCATCCAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VWEHTQSRPLFPRKVDFETESAL*IPSRRC Trigger: GCATCTCCTGGATGGGATCCAGAGGGCTGACTCTGT...CTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACGGTAGCCAATCATCATaGTCCCCTTCTTCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHGSQSS*SPSSPC Trigger: GCATGGTGAAGAAGGGGACCATGATGATTGGCTACC...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCTGAGAAGAGCTGGTTaGAGAACCGGGGGTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSITNSNPSRFLISSTKYLRRAG*RTGGDQ Trigger: CTGGTCACCCCCGGTTCTTCAACCAGCTCTTCTCAG...GTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR TCA 90 bp | GAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGAACCCAGACACTCCTTTGAAGTaGAGAGAGCCAAGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHTQSRPLFPRKVDFENPDTPLK*REPRAA Trigger: TGCCGCCCTTGGCTCTCTTCACTTCAAAGGAGTGTC...TGGGTTCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | ATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTGTAGTGACACTCCTTTaGAGTGAAGAGAGCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILSWESECVGAHTVKATVVVTLL*SEESQG Trigger: CCCTTGGCTCTCTTCACTTCAAAGGAGTGTCACTAC...AACAGTGGCCTTGACTGTGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | AAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGGCGCAAACATCGGCAATTaGATCCAGGGGGTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFPLFNLLHQVPGESKGANIGN*IQGVKG Trigger: GCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGC...GCCTTTGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGAATCCCATCCAGGAGATaGCTGTGTGTCCGAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGSTHSQGHCFLERSILRIPSRR*LCVRDS Trigger: GCTGTCTCGGACACACAGGCATCTCCTGGATGGGAT...TCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | GTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACAGCGGCGAGAAGCTTGTaGGGGTTCCAGGCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKVCAPVPNLIKAYFVRTAARSL*GFQATE Trigger: CTCTGTGGCCTGGAACCCTCACAAGCTTCTCGCCGC...TGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTTTAGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGCCTGTGCCTTCCACATaGGCCATAGCTTCAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVFRHLPDSQYLAGRVSVPVPST*AIASDS Trigger: ACTGTCTGAAGCTATGGCTCATGTGGAAGGCACAGG...CACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCTAAACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | CACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGAACCCAGGACCTGTGCCTTCCACATaGGCCATAGCTTCAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTQSRPLFPRKVDFENPGPVPST*AIASDS Trigger: ACTGTCTGAAGCTATGGCTCATGTGGAAGGCACAGG...TCCTGGGTTCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | TCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGCTCGGACACTGTCGGTaGCAAGTCCCAGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SITNSNPSRFLISSTKYRLGHCR*QVPEKQ Trigger: CTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAG...CCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000230322.2 ENSMUST00000230708.2 ENSMUST00000231048.2 |
||
| CDS-3UTR GCA 90 bp | ACGTTGACGAACTCGGGCTCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCTGCCAGAATGATCTaGCTCTCCAGGTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLTNSGSITNSNPSRFLISARMI*LSRSSG Trigger: CCCTGAGGACCTGGAGAGGCAGATCATTCTGGCAGA...GATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGCCCGAGTTCGTCAACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGGGTAGCCAATCATCATaGTCCCCTTCTTCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VWEHTQSRPLFPRKVDFEGSQSS*SPSSPC Trigger: GCATGGTGAAGAAGGGGACCATGATGATTGGCTACC...CTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| CDS-3UTR TCA 90 bp | TCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGTACCGGGTGAGAGCAAAGGTAGTGACACTCCTTTaGAGTGAAGAGAGCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNPSRFLISSTKYRVRAKVVTLL*SEESQG Trigger: CCCTTGGCTCTCTTCACTTCAAAGGAGTGTCACTAC...CTTTGCTCTCACCCGGTACTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS-3UTR TCA 90 bp | TATTTCGTAAGAACATACTGTAGTGTGTTTAGACACCTTCCTGACAGCCAATACTCACCATGCGCTCCTTaGGCACAGGGGCCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFVRTYCSVFRHLPDSQYSPCAP*AQGPPE Trigger: CTCAGGTGGCCCCTGTGCTCAAGGAGCGCATGGTGA...GTATTGGCTGTCAGGAAGGTGTCTAAACACACTACAGTATGTTCTTACGAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000231029.2 |
||
| CDS-3UTR GCA 90 bp | GTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACAGGAGGCCCCTCTGCTTaGAGTCTGGGTAGCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKVCAPVPNLIKAYFVRTGGPSA*SLGSAE Trigger: TTCAGCGCTACCCAGACTGCAAGCAGAGGGGCCTCC...TGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACATACTGTAGTACGCGGCGGCCACACTaGACCACTTTGTCTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CAPVPNLIKAYFVRTYCSTRRPH*TTLSPV Trigger: CACCGGAGACAAAGTGGTGCAGTGTGGCCGCCGCGT...ACTACAGTATGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTGTTTAGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGCGTACATGTTGGAGATaGAGCCACCAGGACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVFRHLPDSQYLAGRVSVRTCWR*SHQDRR Trigger: TCTTCTGTCCTGGTGGCTCCATCTCCAACATGTACG...CACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCTAAACACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACGTGAGAGCAAAGGCCTaGTCGATGCGCCGCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKGVCPCAQLNKSIFRKNVRAKA*SMRRSN Trigger: GTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCAC...GTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| CDS-3UTR TCA 90 bp | GTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACACTCTCTCATCAGCCTTaGCCACTCGGACACTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VKVCAPVPNLIKAYFVRTLSHQP*PLGHCR Trigger: CCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAG...TGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | TATTTCGTAAGAACATACTGTAGTGTGTTTAGACACCTTCCTGACAGCCAATACATCCATGGCAGCGCTTaGGCAGGTTCGAGGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YFVRTYCSVFRHLPDSQYIHGSA*AGSRCP Trigger: GGGACACCTCGAACCTGCTCAAGCGCTGCCATGGAT...GTATTGGCTGTCAGGAAGGTGTCTAAACACACTACAGTATGTTCTTACGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTAGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTACTCGGACACTGTCGGTaGCAAGTCCCAGAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVVKVCAPVPNLIKAYFVLGHCR*QVPEKQ Trigger: CTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAG...TACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACTACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | TATTTCGTAAGAACATACTGTAGTGTGTTTAGACACCTTCCTGACAGCCAATACCCTCTGCTTGCAGTCTaGGTAGCGCTGAAAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFVRTYCSVFRHLPDSQYPLLAV*VALKAG Trigger: GCCCGCTTTCAGCGCTACCCAGACTGCAAGCAGAGG...GTATTGGCTGTCAGGAAGGTGTCTAAACACACTACAGTATGTTCTTACGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | TATTTCGTAAGAACATACTGTAGTGTGTTTAGACACCTTCCTGACAGCCAATACCTGGCCTGGGATCCATaGCAGCGCTTGAGCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFVRTYCSVFRHLPDSQYLAWDP*QRLSRF Trigger: GAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAG...GTATTGGCTGTCAGGAAGGTGTCTAAACACACTACAGTATGTTCTTACGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACATACTGTAGTGTGAGAGCAAAGGCCTaGTCGATGCGCCGCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CAPVPNLIKAYFVRTYCSVRAKA*SMRRSN Trigger: GTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCAC...ACTACAGTATGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 ENSMUST00000231029.2 |
||
| CDS-3UTR GCA 90 bp | GTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACATCTGCCAGAATGATCTaGCTCTCCAGGTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKVCAPVPNLIKAYFVRTSARMI*LSRSSG Trigger: CCCTGAGGACCTGGAGAGGCAGATCATTCTGGCAGA...TGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | GTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACAACAGAGTCAGCCCTCTaGATCCCATCCAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VKVCAPVPNLIKAYFVRTTESAL*IPSRRC Trigger: GCATCTCCTGGATGGGATCCAGAGGGCTGACTCTGT...TGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACATACTGTAGTAGAGCCCTCAGCCTCTaGCAGAATGATCTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CAPVPNLIKAYFVRTYCSRALSL*QNDLPL Trigger: GAGAGGCAGATCATTCTGGCAGAGGCTGAGGGCTCT...ACTACAGTATGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR GCA 90 bp | AGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACGCAAACATCGGCAATTaGATCCAGGGGGTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKGVCPCAQLNKSIFRKNANIGN*IQGVKG Trigger: GCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGC...GTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACATACTGTAGTTCATGGCGTACATGTTaGAGATGGAGCCACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CAPVPNLIKAYFVRTYCSSWRTC*RWSHQD Trigger: GTCCTGGTGGCTCCATCTCCAACATGTACGCCATGA...ACTACAGTATGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACATACTGTAGTGTAGTGACACTCCTTTaGAGTGAAGAGAGCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CAPVPNLIKAYFVRTYCSVVTLL*SEESQG Trigger: CCCTTGGCTCTCTTCACTTCAAAGGAGTGTCACTAC...ACTACAGTATGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACATACTGTAGTTGGTCCCCTTCAGAATaGCCTCATCTACAACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CAPVPNLIKAYFVRTYCSWSPSE*PHLQQS Trigger: GGATTGTTGTAGATGAGGCCATTCTGAAGGGGACCA...ACTACAGTATGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS TCA 90 bp | GGAGTCCCCGGTCAGGCCTGTGACTCTTCCCTACCTCCTTTGAAGTaGAGAGAGCCAAGGGCGGCAGGGCCCGGAGGCCCCTCTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVPGQACDSSLPPLK*REPRAAGPGGPSAC Trigger: GCAAGCAGAGGGGCCTCCGGGCCCTGCCGCCCTTGGCTCTCTTCACTTCAAAGGAGGTAGGGAAGAGTCACAGGCCTGACCGGGGACTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS TCA 90 bp | CTGGGAGGCACAAACCAGAAGCACACGTTGACGAACTCGGGCGGGTaGGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCCTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGGTNQKHTLTNSGG*EQRPGRCAAPTPAH Trigger: GTGGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGCCCGAGTTCGTCAACGTGTGCTTCTGGTTTGTGCCTCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231029.2 |
||
| CDS TCA 90 bp | ACTCAGGAGTCCCCGGTCAGGCCTGTGACTCTTCCCTACCTCCTTTaGAGTGAAGAGAGCCAAGGGCGGCAGGGCCCGGAGGCCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQESPVRPVTLPYLL*SEESQGRQGPEAPL Trigger: CAGAGGGGCCTCCGGGCCCTGCCGCCCTTGGCTCTCTTCACTTCAAAGGAGGTAGGGAAGAGTCACAGGCCTGACCGGGGACTCCTGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS TCA 90 bp | CCTTCTTCCCCCGAAGGCTGGGAGGCACAAACCAGAAGCACACGTTaGCGAACTCGGGCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSSPEGWEAQTRSTR*RTRAGESKGLVDAP Trigger: CGGCGCATCGACCAGGCCTTTGCTCTCACCCGCCCGAGTTCGTCAACGTGTGCTTCTGGTTTGTGCCTCCCAGCCTTCGGGGGAAGAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231029.2 |
||
| CDS-3UTR CAA 90 bp | CTCCACCAAGTACCGGGTGAGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACCCGTGTACTGGCTAGTGTaGAGGCTCTCCGTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: LHQVPGESKGLVDAPLQPVYWLV*RLSVMM Trigger: CATCATCACGGAGAGCCTCAACACTAGCCAGTACAC...GGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTACTTGGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCCTGGGATCCATGGCAGCGCTTGAGCAGGTTCGAGGTGTCCCGGAGAAGAGGCAAACATCGGCAATaGCATCCAGGGGGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAWDPWQRLSRFEVSRRRGKHRQ*HPGGQR Trigger: CCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCC...TCTTCTCCGGGACACCTCGAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS TCA 90 bp | ATGAGCCGGAGGAAGATCACACTCAGGAGTCCCCGGTCAGGCCTGTaGCTCTTCCCTACCTCCTTTGAAGTGAAGAGAGCCAAGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: MSRRKITLRSPRSGL*LFPTSFEVKRAKGG Trigger: GCCGCCCTTGGCTCTCTTCACTTCAAAGGAGGTAGGGAAGAGTCACAGGCCTGACCGGGGACTCCTGAGTGTGATCTTCCTCCGGCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS-3UTR CAA 90 bp | TGTCGCTGGCAAACATCGGCAATTGCATCCAGGGGGTCAAAGGCCCCTAGCACGCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CRWQTSAIASRGSKAPSTPLSSA*TTRTLS Trigger: CGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGG...CGTGCTAGGGGCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230342.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGTAGCCCAGCTCTGTAGTCCAGGCTGGCCTCAAACTGGCTGCTTCTGTGATCCATGGCAGCGCTaGAGCAGGTTCGAGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCVAQLCSPGWPQTGCFCDPWQR*SRFEVS Trigger: GGACACCTCGAACCTGCTCAAGCGCTGCCATGGATC...ACAGAAGCAGCCAGTTTGAGGCCAGCCTGGACTACAGAGCTGGGCTACACAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS TCA 90 bp | GCCAAGTCCCAGAAAAGCAGCTCCCTTGGTGATGGAGTAGTGACATaGGCCGGAGGAAGATCACACTCAGGAGTCCCCGGTCAGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AKSQKSSSLGDGVVT*AGGRSHSGVPGQAC Trigger: ACAGGCCTGACCGGGGACTCCTGAGTGTGATCTTCCTCCGGCTCATGTCACTACTCCATCACCAAGGGAGCTGCTTTTCTGGGACTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS-3UTR CAA 90 bp | CGCTGGCAAACATCGGCAATTGCATCCAGGGGGTCAAAGGCCCCTAGCACGGTGGTGACATGGCTAGTGTaGAGGCTCTCCGTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RWQTSAIASRGSKAPSTVVTWLV*RLSVMM Trigger: CATCATCACGGAGAGCCTCAACACTAGCCATGTCAC...CACCGTGCTAGGGGCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230342.2 |
||
| CDS-3UTR CAA 90 bp | CACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACAGATCCATGGCAGCGCTaGAGCAGGTTCGAGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLPDSQYLAGRVSVWEHTDPWQR*SRFEVS Trigger: GGACACCTCGAACCTGCTCAAGCGCTGCCATGGATC...TGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS TCA 90 bp | GCTGGTAGCCAATCATCATGGTCCCCTTCTTCACCATGCGCTCCTTaGGCACAGGGGCCACCTCCATTACCAACTCAAATCCTTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGSQSSWSPSSPCAP*AQGPPPLPTQILPA Trigger: AGCGGGAAGGATTTGAGTTGGTAATGGAGGTGGCCCCTGTGCTCAAGGAGCGCATGGTGAAGAAGGGGACCATGATGATTGGCTACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230288.2 |
||
| CDS TCA 90 bp | CTCGGACACTGTCGGTGCCAAGTCCCAGAAAAGCAGCTCCCTTGGTaGTGGAGTAGTGACATGAGCCGGAGGAAGATCACACTCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGHCRCQVPEKQLPW*WSSDMSRRKITLRS Trigger: ACTCCTGAGTGTGATCTTCCTCCGGCTCATGTCACTACTCCATCACCAAGGGAGCTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS-3UTR CAA 90 bp | AGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RHLPDSQYLAGRVSVWEHPLSSA*TTRTLS Trigger: CGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGG...GTGCTCCCACACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS CCA 90 bp | CCTTCCATTCGCAGACCTTCTCAGAGGCACTGGTCCCCTTCAGAATaGCCTCATCTACAACAATCCCAAACACGTCCTGGAGCAAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSIRRPSQRHWSPSE*PHLQQSQTRPGARP Trigger: AGGCCTTGCTCCAGGACGTGTTTGGGATTGTTGTAGATGAGGCCATTCTGAAGGGGACCAGTGCCTCTGAGAAGGTCTGCGAATGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000023805.3 ENSMUST00000229043.2 ENSMUST00000229252.2 ENSMUST00000229345.2 ENSMUST00000229470.2 ENSMUST00000229514.2 ENSMUST00000230288.2 ENSMUST00000230322.2 ENSMUST00000230656.2 ENSMUST00000230687.2 ENSMUST00000231030.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CAA 90 bp | GAACCACAGTCCGTGTCGCTGGCAAACATCGGCAATTGCATCCAGGGGGTCAAAGTGTACTGGCTAGTGTaGAGGCTCTCCGTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: EPQSVSLANIGNCIQGVKVYWLV*RLSVMM Trigger: CATCATCACGGAGAGCCTCAACACTAGCCAGTACAC...TTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000230322.2 ENSMUST00000231048.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTTTCACCATGCGCTCCTaGAGCACAGGGGCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVWEHTQSRPLFPRKVDFFTMRS*STGATS Trigger: GGAGGTGGCCCCTGTGCTCAAGGAGCGCATGGTGAA...AAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACACACT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | ATACTTAGCTGGGAGAGTGAGTGTGTGGGAGCACACACAGTCAAGGCCACTGTTGGCAAACATCGGCAATaGCATCCAGGGGGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ILSWESECVGAHTVKATVGKHRQ*HPGGQR Trigger: CCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCC...AACAGTGGCCTTGACTGTGTGTGCTCCCACACACTCACTCTCCCAGCTAAGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | TCGGGCTCCATTACCAACTCAAATCCTTCCCGCTTTTTAATCTCCTCCACCAAGCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGSITNSNPSRFLISSTKPLSSA*TTRTLS Trigger: CGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGG...CTTGGTGGAGGAGATTAAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGCCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230708.2 |
||
| CDS-3UTR CAA 90 bp | TACTGTAGTGTGTTTAGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGCCACACTGCACCACTTaGTCTCCGGTGTCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YCSVFRHLPDSQYLAGRVPHCTT*SPVSRA Trigger: GGCTCTGGACACCGGAGACAAAGTGGTGCAGTGTGG...CACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCTAAACACACTACAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGGTGTACTGGCTAGTGTaGAGGCTCTCCGTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: VWEHTQSRPLFPRKVDFEVYWLV*RLSVMM Trigger: CATCATCACGGAGAGCCTCAACACTAGCCAGTACAC...CTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTTTAGACACCTTCCTGACAGCCAATACTTAGCTGGGAGAGTGAGTGTGGGCAAACATCGGCAATaGCATCCAGGGGGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVFRHLPDSQYLAGRVSVGKHRQ*HPGGQR Trigger: CCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCC...CACACTCACTCTCCCAGCTAAGTATTGGCTGTCAGGAAGGTGTCTAAACACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTAGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTACCACACTGCACCACTTaGTCTCCGGTGTCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVVKVCAPVPNLIKAYFVPHCTT*SPVSRA Trigger: GGCTCTGGACACCGGAGACAAAGTGGTGCAGTGTGG...TACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACTACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGGAGCACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGACACCTGAGACAGCCTTaGGCTGTAATCTGGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CGSTHSQGHCFLERSILRHLRQP*AVIWTL Trigger: GAGAGTCCAGATTACAGCCAAAGGCTGTCTCAGGTG...TCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTGCTCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000231029.2 |
||
| CDS-3UTR CAA 90 bp | ATGCTGGTAGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCCCTCTCTCATCAGCCTaGACCACTCGGACACTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MLVVKVCAPVPNLIKAYFPLSSA*TTRTLS Trigger: CGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGG...GAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACTACCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | CACACACAGTCAAGGCCACTGTTTCCTAGAAAGGTCGATTTTGAGAACCCAGGAATCGTAGAACTTGTCTaGCTGGAAGAGGTAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HTQSRPLFPRKVDFENPGIVELV*LEEVAG Trigger: GCCAGCTACCTCTTCCAGCAAGACAAGTTCTACGAT...TCCTGGGTTCTCAAAATCGACCTTTCTAGGAAACAGTGGCCTTGACTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACGTGTACTGGCTAGTGTaGAGGCTCTCCGTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: SKGVCPCAQLNKSIFRKNVYWLV*RLSVMM Trigger: CATCATCACGGAGAGCCTCAACACTAGCCAGTACAC...GTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | TATTTCGTAAGAACATACTGTAGTGTGTTTAGACACCTTCCTGACAGCCAATACTTCATGGCGTACATGTaGGAGATGGAGCCACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YFVRTYCSVFRHLPDSQYFMAYM*EMEPPG Trigger: TCCTGGTGGCTCCATCTCCAACATGTACGCCATGAA...GTATTGGCTGTCAGGAAGGTGTCTAAACACACTACAGTATGTTCTTACGAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | AGTAAAGGTGTGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACATCGTAGAACTTGTCTaGCTGGAAGAGGTAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKGVCPCAQLNKSIFRKNIVELV*LEEVAG Trigger: GCCAGCTACCTCTTCCAGCAAGACAAGTTCTACGAT...GTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACACACCTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000230288.2 |
||
| CDS-3UTR CAA 90 bp | TGTGCCCCTGTGCCCAACTTAATAAAAGCATATTTCGTAAGAACATACTGTAGTCACCTGAGACAGCCTTaGGCTGTAATCTGGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CAPVPNLIKAYFVRTYCSHLRQP*AVIWTL Trigger: GAGAGTCCAGATTACAGCCAAAGGCTGTCTCAGGTG...ACTACAGTATGTTCTTACGAAATATGCTTTTATTAAGTTGGGCACAGGGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023805.3 ENSMUST00000231029.2 |
||
| CDS CCA 72 bp | CACGTTGACGAACTCGGGCGGGTGAGAGCAAAGGCCTaGTCGATGCGCCGCTCCAACCCCTGCCCACCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HVDELGRVRAKA*SMRRSNPCPPC Trigger: ACAGGGTGGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGCCCGAGTTCGTCAACGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231029.2 |
||
| CDS TCA 72 bp | GGTCAGGCCTGTGACTCTTCCCTACCTCCTTTGAAGTaGAGAGAGCCAAGGGCGGCAGGGCCCGGAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GQACDSSLPPLK*REPRAAGPGGP Trigger: GGGGCCTCCGGGCCCTGCCGCCCTTGGCTCTCTTCACTTCAAAGGAGGTAGGGAAGAGTCACAGGCCTGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS TCA 72 bp | CCCGAAGGCTGGGAGGCACAAACCAGAAGCACACGTTaGCGAACTCGGGCGGGTGAGAGCAAAGGCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PEGWEAQTRSTR*RTRAGESKGLV Trigger: GACCAGGCCTTTGCTCTCACCCGCCCGAGTTCGTCAACGTGTGCTTCTGGTTTGTGCCTCCCAGCCTTCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231029.2 |
||
| CDS TCA 72 bp | ACAAACCAGAAGCACACGTTGACGAACTCGGGCGGGTaGGAGCAAAGGCCTGGTCGATGCGCCGCTCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: TNQKHTLTNSGG*EQRPGRCAAPT Trigger: GGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGCCCGAGTTCGTCAACGTGTGCTTCTGGTTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231029.2 |
||
| CDS CAA 72 bp | AGCTCCCTTGGTGATGGAGTAGTGACATGGCTAGTGTaGAGGCTCTCCGTGATGATGCGCCCAGCCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLGDGVVTWLV*RLSVMMRPARA Trigger: TGCTCTGGCTGGGCGCATCATCACGGAGAGCCTCAACACTAGCCATGTCACTACTCCATCACCAAGGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230342.2 |
||
| CDS TCA 72 bp | TGTCGGTGCCAAGTCCCAGAAAAGCAGCTCCCTTGGTaGTGGAGTAGTGACACAGGACAGAAGACCCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: CRCQVPEKQLPW*WSSDTGQKTPS Trigger: GGATGGGGTCTTCTGTCCTGTGTCACTACTCCATCACCAAGGGAGCTGCTTTTCTGGGACTTGGCACCGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230322.2 |
||
| CDS TCA 72 bp | AGGAAGATCACACTCAGGAGTCCCCGGTCAGGCCTGTaGCTCTTCCCTACCTCCTTTGAAGTGAAGAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RKITLRSPRSGL*LFPTSFEVKRA Trigger: GGCTCTCTTCACTTCAAAGGAGGTAGGGAAGAGTCACAGGCCTGACCGGGGACTCCTGAGTGTGATCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS TCA 72 bp | CAGAAAAGCAGCTCCCTTGGTGATGGAGTAGTGACATaGGCCGGAGGAAGATCACACTCAGGAGTCCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: QKSSSLGDGVVT*AGGRSHSGVPG Trigger: ACCGGGGACTCCTGAGTGTGATCTTCCTCCGGCTCATGTCACTACTCCATCACCAAGGGAGCTGCTTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS CAA 72 bp | AACACGGGGGCAATCTCATATGTGTACTGGCTAGTGTaGAGGCTCTCCGTGATGATGCGCCCAGCCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: NTGAISYVYWLV*RLSVMMRPARA Trigger: TGCTCTGGCTGGGCGCATCATCACGGAGAGCCTCAACACTAGCCAGTACACATATGAGATTGCCCCCGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000023805.3 ENSMUST00000229043.2 ENSMUST00000229470.2 ENSMUST00000229514.2 ENSMUST00000230288.2 ENSMUST00000230322.2 ENSMUST00000230687.2 ENSMUST00000231030.2 ENSMUST00000231048.2 |
||
| CDS TCA 72 bp | TGTCGGTGCCAAGTCCCAGAAAAGCAGCTCCCTTGGTaGTGGAGTAGTGACATGAGCCGGAGGAAGATCACA | + |
|
Preference number: 6 (lower is better) Translates to: CRCQVPEKQLPW*WSSDMSRRKIT Trigger: TGTGATCTTCCTCCGGCTCATGTCACTACTCCATCACCAAGGGAGCTGCTTTTCTGGGACTTGGCACCGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231048.2 |
||
| CDS CCA 72 bp | CGCAGACCTTCTCAGAGGCACTGGTCCCCTTCAGAATaGCCTCATCTACAACAATCCCAAACACGTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RRPSQRHWSPSE*PHLQQSQTRPG Trigger: TCCAGGACGTGTTTGGGATTGTTGTAGATGAGGCCATTCTGAAGGGGACCAGTGCCTCTGAGAAGGTCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENSMUST00000023805.3 ENSMUST00000229043.2 ENSMUST00000229252.2 ENSMUST00000229345.2 ENSMUST00000229470.2 ENSMUST00000229514.2 ENSMUST00000230288.2 ENSMUST00000230322.2 ENSMUST00000230656.2 ENSMUST00000230687.2 ENSMUST00000231030.2 ENSMUST00000231048.2 |
||
| CDS TCA 72 bp | CCAGGGCACGGAGTTTCTTCAGCACCTCCTCTTCCATaGGCACAAACACGGGGGCAATCTCATATGTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: PGHGVSSAPPLP*AQTRGQSHMCT Trigger: AGTACACATATGAGATTGCCCCCGTGTTTGTGCTCATGGAAGAGGAGGTGCTGAAGAAACTCCGTGCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000023805.3 ENSMUST00000229043.2 ENSMUST00000229470.2 ENSMUST00000229514.2 ENSMUST00000230288.2 ENSMUST00000230322.2 ENSMUST00000230687.2 ENSMUST00000231030.2 ENSMUST00000231048.2 |
||
| CDS TCA 72 bp | CAATCATCATGGTCCCCTTCTTCACCATGCGCTCCTTaGGCACAGGGGCCACCTCCATTACCAACTCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: QSSWSPSSPCAP*AQGPPPLPTQI Trigger: GATTTGAGTTGGTAATGGAGGTGGCCCCTGTGCTCAAGGAGCGCATGGTGAAGAAGGGGACCATGATGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230288.2 |
||
| CDS CCA 72 bp | TGTGTACCTTCTCAGAGGCACTGGTCCCCTTCAGAATaGCCTCATCTACAACAATCCCAAACACGTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CVPSQRHWSPSE*PHLQQSQTRPG Trigger: TCCAGGACGTGTTTGGGATTGTTGTAGATGAGGCCATTCTGAAGGGGACCAGTGCCTCTGAGAAGGTACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229938.2 |
||