Pregenerated sensors for CRYZL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033488Ensembl transcript IDs: ENSMUST00000046743.11, ENSMUST00000119891.7, ENSMUST00000193791.6, ENSMUST00000194220.2, ENSMUST00000195702.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAAGTCGAGAATGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGGTaGAGAGGCTATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GSREWNSSRSGSRSW*RGYGGMFFTGLLPL Trigger: CAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATAGCCTCTGCACCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCATTCTCGACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR CCA 90 bp | ATGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGGTGCAGAGGCTATaGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTACTCAGC | + |
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Preference number: 1 (lower is better) Translates to: MELKQVRKQELVQRL*RDVLYWLASPGLLS Trigger: GCTGAGTAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATAGCCTCTGCACCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR TCA 90 bp | CGCTTGGAGAAAAAGACATGTGCAAGTAGACCAGTCGGCCATCACTaGAAAGGCAGGGCCATGGGAGTGATTTCTGCAGCAGCCAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: RLEKKTCASRPVGHH*KGRAMGVISAAASL Trigger: GAGACTGGCTGCTGCAGAAATCACTCCCATGGCCCTGCCTTTTCAGTGATGGCCGACTGGTCTACTTGCACATGTCTTTTTCTCCAAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR CCA 90 bp | GTCACTAAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTaGGAGTCTGCCCAGGGTAGGGTTTACTTGAGGGACAAGAGCACC | + |
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Preference number: 1 (lower is better) Translates to: VTKDEPFKMQEGQQT*ESAQGRVYLRDKST Trigger: GGTGCTCTTGTCCCTCAAGTAAACCCTACCCTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119891.7 |
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| 3UTR CCA 90 bp | GCAAGAAAGCAGAAGCAAGGAGAACTGACACCAAGACACGGCACCTaGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ARKQKQGELTPRHGT*VTKDEPFKMQEGQQ Trigger: CTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTTCTGCTTTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
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| 3UTR CCA 90 bp | AAAGGAAGTCGAGAATGGAACTCAAGCAGGTCAGGAAGCAGGAGCTaGTGCAGAGGCTATGGAGGGATGTTCTTTACTGGCTTGCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: KGSREWNSSRSGSRS*CRGYGGMFFTGLLP Trigger: GGGAAGCAAGCCAGTAAAGAACATCCCTCCATAGCCTCTGCACCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCATTCTCGACTTCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR TCA 90 bp | GGCCACAATGATTACAGGCAGCAAGAAAGCAGAAGCAAGGAGAACTaGCACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: GHNDYRQQESRSKEN*HQDTAPGSLRMSPL Trigger: TAAAGGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTTCTGCTTTCTTGCTGCCTGTAATCATTGTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR GCA 90 bp | GTAGGTCATCTATGCTCCGTGAAGAGGCAGCTCCTGGCTAGAATGTaGACACTCTTTCCCAATTCTGCTTCACCTTCCTTCTCTTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: VGHLCSVKRQLLARM*TLFPNSASPSFSSR Trigger: CCTGGAAGAGAAGGAAGGTGAAGCAGAATTGGGAAAGAGTGTGCACATTCTAGCCAGGAGCTGCCTCTTCACGGAGCATAGATGACCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR CCA 90 bp | GCTTACACTTCCACATTGCTGTTCATCACTAAAGGAAGTCGAGAATaGAACTCAAGCAGGTCAGGAAGCAGGAGCTGGTGCAGAGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: AYTSTLLFITKGSRE*NSSRSGSRSWCRGY Trigger: ATAGCCTCTGCACCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCATTCTCGACTTCCTTTAGTGATGAACAGCAATGTGGAAGTGTAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR TCA 90 bp | TTTGAACTCAGGACCTTTAGAAGAGCAGTCAGTGCTCTTACCCGCTaGGCCATCTCATCAGCCCTATTCCTTCACTTGTTAAGCAACACA | + |
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Preference number: 1 (lower is better) Translates to: FELRTFRRAVSALTR*AISSALFLHLLSNT Trigger: TGTGTTGCTTAACAAGTGAAGGAATAGGGCTGATGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTCTAAAGGTCCTGAGTTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR GCA 90 bp | CTAGCCAGTACAGTACCTATTTCTCAAGGAACTCACAGTACCTTTTaGTCACAGAAGGGGTTAAGTTTAGGCAGGAATGTCTGTGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LASTVPISQGTHSTF*SQKGLSLGRNVCGH Trigger: GTGGCCACAGACATTCCTGCCTAAACTTAACCCCTTCTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGAAATAGGTACTGTACTGGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR TCA 90 bp | TCAACTGAAGCTCCTTTCTCTGTGGTAACTCCAGCTGTGTCAAGTTaGCACAAAACTAGCCAGTACAGTACCTATTTCTCAAGGAACTCA | + |
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Preference number: 1 (lower is better) Translates to: STEAPFSVVTPAVSS*HKTSQYSTYFSRNS Trigger: TGAGTTCCTTGAGAAATAGGTACTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTACCACAGAGAAAGGAGCTTCAGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR GCA 90 bp | TACCATAGATCAAATAGAAAAGGTTGCTTTCTAGATTCACACAAGTaGATAGGAAGGAATATTACCAAGCACACTGACTGGGAGCAGATA | + |
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Preference number: 1 (lower is better) Translates to: YHRSNRKGCFLDSHK*IGRNITKHTDWEQI Trigger: TATCTGCTCCCAGTCAGTGTGCTTGGTAATATTCCTTCCTATGCACTTGTGTGAATCTAGAAAGCAACCTTTTCTATTTGATCTATGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCGAGGGACAGCAGACTTaGGAGTCTGCCCAGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: KQGELTPRHGTWVTKDEPEGQQT*ESAQGR Trigger: CCTACCCTGGGCAGACTCCCAAGTCTGCTGTCCCTC...GGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTTATAGAACCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGACGAGGGACAGCAGACTTaGGAGTCTGCCCAGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: LSYRTKTTSPEMVPPTRDEGQQT*ESAQGR Trigger: CCTACCCTGGGCAGACTCCCAAGTCTGCTGTCCCTC...GTCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR-3UTR GCA 90 bp | CGGCCATCACTGAAAAGGCAGGGCCATGGGAGTGATTTCTGCAGCAGCCAGTCTCTCCTGGCTAGAATGTaGACACTCTTTCCCAATTCT | + |
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Preference number: 2 (lower is better) Translates to: RPSLKRQGHGSDFCSSQSLLARM*TLFPNS Trigger: AGAATTGGGAAAGAGTGTGCACATTCTAGCCAGGAG...AGACTGGCTGCTGCAGAAATCACTCCCATGGCCCTGCCTTTTCAGTGATGGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAGTTTAGGCAGGAATGTCTGTGGCCACAATGATTACAGGCAGCAAGAAAGCGAGGGACAGCAGACTTaGGAGTCTGCCCAGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: LSLGRNVCGHNDYRQQESEGQQT*ESAQGR Trigger: CCTACCCTGGGCAGACTCCCAAGTCTGCTGTCCCTC...GCTTTCTTGCTGCCTGTAATCATTGTGGCCACAGACATTCCTGCCTAAACTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR-3UTR TCA 90 bp | ACTAAAGGAAGTCGAGAATGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGGTGCTGTCTGTGGCCACAATaGTTACAGGCAGCAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: TKGSREWNSSRSGSRSWCCLWPQ*LQAARK Trigger: CTTTCTTGCTGCCTGTAATCATTGTGGCCACAGACA...GCACCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCATTCTCGACTTCCTTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR-3UTR TCA 90 bp | AATATTACCAAGCACACTGACTGGGAGCAGATAGCATCGTTCCTTGGATCAGAGGCCAGTGTTAGGGACTaGACCCAAGACCTGACAAGT | + |
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Preference number: 2 (lower is better) Translates to: NITKHTDWEQIASFLGSEASVRD*TQDLTS Trigger: ACTTGTCAGGTCTTGGGTTCAGTCCCTAACACTGGC...CTCTGATCCAAGGAACGATGCTATCTGCTCCCAGTCAGTGTGCTTGGTAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR CAA 90 bp | CAGCTTGCCTTCAGTGATGCCAAAAGGGTTCAGGAAATGCTGAAATaGCCCTCAAGGTTGAGTTTCATGAGAGCTGGGAAAACCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: QLAFSDAKRVQEMLK*PSRLSFMRAGKTIW Trigger: CCAGATGGTTTTCCCAGCTCTCATGAAACTCAACCTTGAGGGCAATTTCAGCATTTCCTGAACCCTTTTGGCATCACTGAAGGCAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR CAA 90 bp | ACTAGCCAGTACAGTACCTATTTCTCAAGGAACTCACAGTACCTTTaGCTCACAGAAGGGGTTAAGTTTAGGCAGGAATGTCTGTGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: TSQYSTYFSRNSQYL*LTEGVKFRQECLWP Trigger: TGGCCACAGACATTCCTGCCTAAACTTAACCCCTTCTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGAAATAGGTACTGTACTGGCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR CAA 90 bp | AGTGATGCCAAAAGGGTTCAGGAAATGCTGAAATTGCCCTCAAGGTaGAGTTTCATGAGAGCTGGGAAAACCATCTGGGTCACTAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SDAKRVQEMLKLPSR*SFMRAGKTIWVTKD Trigger: ATCCTTAGTGACCCAGATGGTTTTCCCAGCTCTCATGAAACTCAACCTTGAGGGCAATTTCAGCATTTCCTGAACCCTTTTGGCATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACTAAAGGAAGAAGCAAGGAGAACTaGCACCAAGACACGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: EERVYSAYTSTLLFITKGRSKEN*HQDTAP Trigger: AGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTTCT...TCCTTTAGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR-3UTR GCA 90 bp | GCCATCATGTTGTTACTGGGATTTGAACTCAGGACCTTTAGAAGAGCAGTCAGTACTCTTTCCCAATTCTaGTTCACCTTCCTTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: AIMLLLGFELRTFRRAVSTLSQF*FTFLLF Trigger: GAAGAGAAGGAAGGTGAAGCAGAATTGGGAAAGAGT...ACTGACTGCTCTTCTAAAGGTCCTGAGTTCAAATCCCAGTAACAACATGATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACTAAAGGAACTGGTGCAGAGGCTATaGAGGGATGTTCTTTACTGG | + |
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Preference number: 2 (lower is better) Translates to: RKGFIQLTLPHCCSSLKELVQRL*RDVLYW Trigger: CCAGTAAAGAACATCCCTCCATAGCCTCTGCACCAG...TTCCTTTAGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACTAAAGGAAGTTGTTCTTTACTGGCTTaGTTCCCCTGGCTTACTCAG | + |
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Preference number: 2 (lower is better) Translates to: ERVYSAYTSTLLFITKGSCSLLA*FPWLTQ Trigger: CTGAGTAAGCCAGGGGAAGCAAGCCAGTAAAGAACA...ACTTCCTTTAGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR TCA 72 bp | AGCAGACTTGGGAGTCTGCCCAGGGTAGGGTTTACTTaGGGGACAAGAGCACCTTGCCCGTGGATTTGCGCT | + |
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Preference number: 3 (lower is better) Translates to: SRLGSLPRVGFT*GTRAPCPWICA Trigger: AGCGCAAATCCACGGGCAAGGTGCTCTTGTCCCTCAAGTAAACCCTACCCTGGGCAGACTCCCAAGTCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119891.7 |
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| 3UTR GCA 72 bp | ACGGCACCTGGGTCACTAAGGATGAGCCCTTTAAAATaGAGGAGGGACAGCAGACTTGGGAGTCTGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: TAPGSLRMSPLK*RRDSRLGSLPR Trigger: CCTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCAGGTGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
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| 3UTR TCA 72 bp | CAGTCGGCCATCACTGAAAAGGCAGGGCCATGGGAGTaGTTTCTGCAGCAGCCAGTCTCTGAGGAAGAATTG | + |
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Preference number: 3 (lower is better) Translates to: QSAITEKAGPWE*FLQQPVSEEEL Trigger: CAATTCTTCCTCAGAGACTGGCTGCTGCAGAAATCACTCCCATGGCCCTGCCTTTTCAGTGATGGCCGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR GCA 72 bp | GAATGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGGTaGAGAGGCTATGGAGGGATGTTCTTTACTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: EWNSSRSGSRSW*RGYGGMFFTGL Trigger: CAAGCCAGTAAAGAACATCCCTCCATAGCCTCTGCACCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR GCA 72 bp | AAACCATCTGGGTCACTAAGGATGAGCCCTTTAAAATaGAGGAGGGACAGCAGACTTGGGAGTCTGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: KPSGSLRMSPLK*RRDSRLGSLPR Trigger: CCTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCAGATGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR TCA 72 bp | TCCTTCTCTTCCAGGCGCCATCCAGCTTGCCTTCAGTaGTGCCAAAAGGGTTCAGGAAATGCTGAAATTGCC | + |
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Preference number: 3 (lower is better) Translates to: SFSSRRHPACLQ*CQKGSGNAEIA Trigger: GGCAATTTCAGCATTTCCTGAACCCTTTTGGCATCACTGAAGGCAAGCTGGATGGCGCCTGGAAGAGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR GCA 72 bp | CTATGCTCCGTGAAGAGGCAGCTCCTGGCTAGAATGTaGACACTCTTTCCCAATTCTGCTTCACCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LCSVKRQLLARM*TLFPNSASPSF Trigger: GAAGGAAGGTGAAGCAGAATTGGGAAAGAGTGTGCACATTCTAGCCAGGAGCTGCCTCTTCACGGAGCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR TCA 72 bp | AAAAAGACATGTGCAAGTAGACCAGTCGGCCATCACTaGAAAGGCAGGGCCATGGGAGTGATTTCTGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: KKTCASRPVGHH*KGRAMGVISAA Trigger: TGCTGCAGAAATCACTCCCATGGCCCTGCCTTTTCAGTGATGGCCGACTGGTCTACTTGCACATGTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR CCA 72 bp | TCCACATTGCTGTTCATCACTAAAGGAAGTCGAGAATaGAACTCAAGCAGGTCAGGAAGCAGGAGCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: STLLFITKGSRE*NSSRSGSRSWC Trigger: GCACCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCATTCTCGACTTCCTTTAGTGATGAACAGCAATGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR TCA 72 bp | CAGAGATGGTCCCACCCACAAGGGACCTTTCCCCCTTaGTCACTAATTAAGAAAATGCCTTACAGCTGGATC | + |
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Preference number: 3 (lower is better) Translates to: QRWSHPQGTFPP*SLIKKMPYSWI Trigger: GATCCAGCTGTAAGGCATTTTCTTAATTAGTGATCAAGGGGGAAAGGTCCCTTGTGGGTGGGACCATCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR TCA 72 bp | AGGACCTTTAGAAGAGCAGTCAGTGCTCTTACCCGCTaGGCCATCTCATCAGCCCTATTCCTTCACTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: RTFRRAVSALTR*AISSALFLHLL Trigger: TAACAAGTGAAGGAATAGGGCTGATGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTCTAAAGGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR CCA 72 bp | TCAAGGTTGAGTTTCATGAGAGCTGGGAAAACCATCTaGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SRLSFMRAGKTI*VTKDEPFKMQE Trigger: CTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCAGATGGTTTTCCCAGCTCTCATGAAACTCAACCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| 3UTR GCA 72 bp | GGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATTaGTGTTCATCACTAAAGGAAGTCGAGAATGGAACT | + |
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Preference number: 3 (lower is better) Translates to: GRKGFIQLTLPH*CSSLKEVENGT Trigger: AGTTCCATTCTCGACTTCCTTTAGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR GCA 72 bp | TCAAATAGAAAAGGTTGCTTTCTAGATTCACACAAGTaGATAGGAAGGAATATTACCAAGCACACTGACTGG | + |
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Preference number: 3 (lower is better) Translates to: SNRKGCFLDSHK*IGRNITKHTDW Trigger: CCAGTCAGTGTGCTTGGTAATATTCCTTCCTATGCACTTGTGTGAATCTAGAAAGCAACCTTTTCTATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| CDS-3UTR CCA 90 bp | CAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCTTTAACTCTGACCTCCTGTaGCCCGACGGGGCGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QGELTPRHGTWVTKDEPFNSDLL*PDGAGS Trigger: GCTCCCCGCCCCGTCGGGCCACAGGAGGTCAGAGTT...AAAGGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
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| CDS-3UTR TCA 90 bp | GCTGGTGCAGAGGCTATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTCCGTGTGGGGGTGGATaGGCCCTTGCTGGCAGTACT | + |
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Preference number: 4 (lower is better) Translates to: AGAEAMEGCSLLACFPWLPCGGG*ALAGST Trigger: AGTACTGCCAGCAAGGGCTCATCCACCCCCACACGG...AAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATAGCCTCTGCACCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
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| CDS-3UTR GCA 90 bp | CAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCTTTCCTGCCAGGCTTGCCTaGAGAGCCACACCGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QGELTPRHGTWVTKDEPFPARLA*RATPEG Trigger: TCCCTCCGGTGTGGCTCTGCAGGCAAGCCTGGCAGG...AAAGGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
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| CDS-3UTR GCA 90 bp | GCAAGAAAGCAGAAGCAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACTCCTGCCAGGCTTGCCTaGAGAGCCACACCGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: ARKQKQGELTPRHGTWVTPARLA*RATPEG Trigger: TCCCTCCGGTGTGGCTCTGCAGGCAAGCCTGGCAGG...AGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTTCTGCTTTCTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
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| CDS-3UTR GCA 90 bp | GGCACCTGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGCCCTGCCAGGCTTaGCTGCAGAGCCACACCGGA | + |
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Preference number: 4 (lower is better) Translates to: GTWVTKDEPFKMQEGQQTWPCQA*LQSHTG Trigger: TCCGGTGTGGCTCTGCAGGCAAGCCTGGCAGGGCCA...AGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCAGGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
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| CDS-3UTR GCA 90 bp | GATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGTCTGCCCAGGGTCGCCACGTCTATCACTaGGAGGCCTGTGGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DEPFKMQEGQQTWESAQGRHVYH*EACGSS Trigger: GCTGGAGCCACAGGCCTCGCAGTGATAGACGTGGCG...ACCCTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000193791.6 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCTGTCAATGGCTACGTTaGCCCCACCGCTGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQGELTPRHGTWVTKDEPCQWLR*PHRCLP Trigger: TGGCAGGCAGCGGTGGGGTCAACGTAGCCATTGACA...GGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGTGGCCCTGCCAGGCTTaGCTGCAGAGCCACACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVTKDEPFKMQEGQQTWEWPCQA*LQSHTG Trigger: TCCGGTGTGGCTCTGCAGGCAAGCCTGGCAGGGCCA...CTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR GCA 90 bp | AGTCGGCCATCACTGAAAAGGCAGGGCCATGGGAGTGATTTCTGCAGCAGCCAGGGGTGGATGAGCCCTTaGTGGCAGTACTGCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRPSLKRQGHGSDFCSSQGWMSP*WQYCMA Trigger: AGCCATGCAGTACTGCCAGCAAGGGCTCATCCACCC...CTGGCTGCTGCAGAAATCACTCCCATGGCCCTGCCTTTTCAGTGATGGCCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
||
| CDS-3UTR GCA 90 bp | ACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGCGCCACGTCTATCACTaGGAGGCCTGTGGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPRHGTWVTKDEPFKMQERHVYH*EACGSS Trigger: GCTGGAGCCACAGGCCTCGCAGTGATAGACGTGGCG...CTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000193791.6 |
||
| CDS-3UTR GCA 90 bp | AGTCGGCCATCACTGAAAAGGCAGGGCCATGGGAGTGATTTCTGCAGCAGCCAGCCTTGCTGGCAGTACTaGATGGCTGTGGACATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRPSLKRQGHGSDFCSSQPCWQY*MAVDML Trigger: GAGCATGTCCACAGCCATGCAGTACTGCCAGCAAGG...CTGGCTGCTGCAGAAATCACTCCCATGGCCCTGCCTTTTCAGTGATGGCCGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGCCGTGTGGGGGTGGATaGGCCCTTGCTGGCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IWVTKDEPFKMQEGQQTWPCGGG*ALAGST Trigger: AGTACTGCCAGCAAGGGCTCATCCACCCCCACACGG...CCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
||
| CDS-3UTR CCA 90 bp | AGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGTCTGCCCAGGTGGATGAGCCCTTGCTaGCAGTACTGCATGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RMSPLKCRRDSRLGSLPRWMSPC*QYCMAV Trigger: CACAGCCATGCAGTACTGCCAGCAAGGGCTCATCCA...CCTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000194220.2 |
||
| CDS-3UTR TCA 90 bp | AAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGTCTGCCCAGAATGAACATCAACTCTaGCCTCCTGTGGCCCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: KDEPFKMQEGQQTWESAQNEHQL*PPVARR Trigger: CCGTCGGGCCACAGGAGGTCAGAGTTGATGTTCATT...CTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR GCA 90 bp | GCAAGAAAGCAGAAGCAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACTGCTGCTTCAACTCGGTaGAGAGTGCAGCTCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARKQKQGELTPRHGTWVTAASTR*RVQLGS Trigger: ACTACCGAGCTGCACTCTGCACCGAGTTGAAGCAGC...AGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTTCTGCTTTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR GCA 90 bp | AGCAAGAAAGCAGAAGCAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACGCTGCTTCAACTCGGTaGAGAGTGCAGCTCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKKAEARRTDTKTRHLGHAASTR*RVQLGS Trigger: ACTACCGAGCTGCACTCTGCACCGAGTTGAAGCAGC...GTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTTCTGCTTTCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR GCA 90 bp | TGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGAACTGTGCTCCCCTCTaGACCGCCAGCTTGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVTKDEPFKMQEGQQTWENCAPL*TASLHF Trigger: GAAGTGCAAGCTGGCGGTGCAGAGGGGAGCACAGTT...CTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| CDS-3UTR GCA 90 bp | GGCTTGCTTCCCCTGGCTTACTCAGCTTGCTCTCTTATAGAACCAAGACTACCAGACCCCACCGCTGCCTaGCAGCTTCTTCACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLLPLAYSACSLIEPRLPDPTAA*QLLHCI Trigger: GATGCAGTGAAGAAGCTGGCAGGCAGCGGTGGGGTC...TGGTAGTCTTGGTTCTATAAGAGAGCAAGCTGAGTAAGCCAGGGGAAGCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGGGGTGGATGAGCCCTTaGTGGCAGTACTGCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WVTKDEPFKMQEGQQTWEGWMSP*WQYCMA Trigger: AGCCATGCAGTACTGCCAGCAAGGGCTCATCCACCC...CTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000194220.2 |
||
| CDS-3UTR CCA 90 bp | AGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGTCTGCCCAGGGAGCCACCTCTTGAATaGTCAGGGGCTGCTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RMSPLKCRRDSRLGSLPREPPLE*SGAAST Trigger: AGTTGAAGCAGCCCCTGACCATTCAAGAGGTGGCTC...CCTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR CCA 90 bp | AGTACAGTACCTATTTCTCAAGGAACTCACAGTACCTTTTGCTCACAGAAGGGGAACTCTGACCTCCTGTaGCCCGACGGGGCGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STVPISQGTHSTFCSQKGNSDLL*PDGAGS Trigger: GCTCCCCGCCCCGTCGGGCCACAGGAGGTCAGAGTT...CCCCTTCTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGAAATAGGTACTGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
||
| CDS-3UTR CCA 90 bp | GAACTGACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCTTTAAAATGTCACTGCGAGGCCTGTaGCTCCAGCAGCTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELTPRHGTWVTKDEPFKMSLRGL*LQQLLS Trigger: TGACAGCAGCTGCTGGAGCCACAGGCCTCGCAGTGA...CATTTTAAAGGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000193791.6 |
||
| CDS-3UTR TCA 90 bp | ACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGAATGAACATCAACTCTaGCCTCCTGTGGCCCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: TPRHGTWVTKDEPFKMQENEHQL*PPVARR Trigger: CCGTCGGGCCACAGGAGGTCAGAGTTGATGTTCATT...CTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR TCA 90 bp | AAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGTCTGCCCAGGAAGGAAGGCATCGTTaGTCTTGGCGCGGAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: KDEPFKMQEGQQTWESAQEGRHR*SWRGTH Trigger: ATGTGTTCCGCGCCAAGATCAACGATGCCTTCCTTC...CTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193791.6 |
||
| CDS-3UTR GCA 90 bp | CTAGCCAGTACAGTACCTATTTCTCAAGGAACTCACAGTACCTTTTGCTCACAGCCTGCCAGGCTTGCCTaGAGAGCCACACCGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LASTVPISQGTHSTFCSQPARLA*RATPEG Trigger: TCCCTCCGGTGTGGCTCTGCAGGCAAGCCTGGCAGG...CTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGAAATAGGTACTGTACTGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTACTCAGCTTGCTCTCTGCTGCTTCAACTCGGTaGAGAGTGCAGCTCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WRDVLYWLASPGLLSLLSAASTR*RVQLGS Trigger: ACTACCGAGCTGCACTCTGCACCGAGTTGAAGCAGC...AGAGAGCAAGCTGAGTAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
||
| CDS-3UTR GCA 90 bp | AGTCGGCCATCACTGAAAAGGCAGGGCCATGGGAGTGATTTCTGCAGCAGCCAGGCATGGCTGTGGACATaGTCTTGGAAAACACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRPSLKRQGHGSDFCSSQAWLWT*SWKTLQ Trigger: TTGCAGTGTTTTCCAAGAGCATGTCCACAGCCATGC...CTGGCTGCTGCAGAAATCACTCCCATGGCCCTGCCTTTTCAGTGATGGCCGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCAGTACAGTCCCATaGCCGAGATGTTCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKQGELTPRHGTWVTKDEPSTVP*PRCSSG Trigger: TCCTGAAGAACATCTCGGCCATGGGACTGTACTGGG...CTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| 3UTR CAA 72 bp | TGCTTCACCTTCCTTCTCTTCCAGGCGCCATCCAGCTaGCCTTCAGTGATGCCAAAAGGGTTCAGGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: CFTFLLFQAPSS*PSVMPKGFRKC Trigger: GCATTTCCTGAACCCTTTTGGCATCACTGAAGGCAAGCTGGATGGCGCCTGGAAGAGAAGGAAGGTGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAACTCACAGTACCTTTTGCTCACAGAAGGGGTTAAGTTTAGGCAGGAACCTCCCACGCCAGGCTaGGGAGAGACTCCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRNSQYLLLTEGVKFRQEPPTPG*GETPGR Trigger: TCTTCCTGGAGTCTCTCCGCAGCCTGGCGTGGGAGG...TTCCTGCCTAAACTTAACCCCTTCTGTGAGCAAAAGGTACTGTGAGTTCCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGGAAGTCGAGAATGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGGTGCGAGCCACCTCTTGAATaGTCAGGGGCTGCTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TKGSREWNSSRSGSRSWCEPPLE*SGAAST Trigger: AGTTGAAGCAGCCCCTGACCATTCAAGAGGTGGCTC...GCACCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCATTCTCGACTTCCTTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
||
| CDS-3UTR CCA 90 bp | TGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGGAGCCACCTCTTGAATaGTCAGGGGCTGCTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: WVTKDEPFKMQEGQQTWEEPPLE*SGAAST Trigger: AGTTGAAGCAGCCCCTGACCATTCAAGAGGTGGCTC...CTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCCCTTTTTCACAGTGCTaGCATCTGTTCCTGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KQGELTPRHGTWVTKDEPPFSQC*HLFLSL Trigger: TAGAGACAGGAACAGATGTCAGCACTGTGAAAAAGG...GGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR GCA 90 bp | CCATCACTGAAAAGGCAGGGCCATGGGAGTGATTTCTGCAGCAGCCAGTCTCTGGCTCTTGGAAAACACTaGAAAGTCCTGGTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSLKRQGHGSDFCSSQSLALGKH*KVLVLV Trigger: TACCAACACCAGGACTTTGCAGTGTTTTCCAAGAGC...CAGAGACTGGCTGCTGCAGAAATCACTCCCATGGCCCTGCCTTTTCAGTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGTTTAGGCAGGAATGTCTGTGGCCACAATGATTACAGGCAGCAAGAAAGCTCACTGCGAGGCCTGTaGCTCCAGCAGCTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLGRNVCGHNDYRQQESSLRGL*LQQLLS Trigger: TGACAGCAGCTGCTGGAGCCACAGGCCTCGCAGTGA...GCTTTCTTGCTGCCTGTAATCATTGTGGCCACAGACATTCCTGCCTAAACTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
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| CDS-3UTR CCA 90 bp | AGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGTCTGCCCAGGAGTACTGCATGGCTGTaGACATGCTCTTGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RMSPLKCRRDSRLGSLPRSTAWL*TCSWKT Trigger: TGTTTTCCAAGAGCATGTCCACAGCCATGCAGTACT...CCTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000194220.2 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGTGGCCACAATGATTACAGGCAGCAAGAAAGCAGAAGCAAGGAGAACAATGAACATCAACTCTaGCCTCCTGTGGCCCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: NVCGHNDYRQQESRSKENNEHQL*PPVARR Trigger: CCGTCGGGCCACAGGAGGTCAGAGTTGATGTTCATT...GTTCTCCTTGCTTCTGCTTTCTTGCTGCCTGTAATCATTGTGGCCACAGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGGAACTCACAGTACCTTTTGCTCACAGAAGGGGTTAAGTTTAGGCAGGCCTTGCTGGCAGTACTaGATGGCTGTGGACATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQGTHSTFCSQKGLSLGRPCWQY*MAVDML Trigger: GAGCATGTCCACAGCCATGCAGTACTGCCAGCAAGG...CCTGCCTAAACTTAACCCCTTCTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCAAGGAGAACTGACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCAAAGAGACATTTTCTaGAATCCGCCACAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKQGELTPRHGTWVTKDEQRDIF*NPPQGL Trigger: AAGACCCTGTGGCGGATTCCAGAAAATGTCTCTTTG...CTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGTCAGTTCTCCTTGCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR CCA 90 bp | ACACCAAGACACGGCACCTGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGAGTACTGCATGGCTGTaGACATGCTCTTGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TPRHGTWVTKDEPFKMQESTAWL*TCSWKT Trigger: TGTTTTCCAAGAGCATGTCCACAGCCATGCAGTACT...CTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCAGGTGCCGTGTCTTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| 3UTR CAA 72 bp | ACGGGTAGCTGTGAGCCATCATGTTGTTACTGGGATTaGAACTCAGGACCTTTAGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGSCEPSCCYWD*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCTAAAGGTCCTGAGTTCAAATCCCAGTAACAACATGATGGCTCACAGCTACCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTCACTAAGGATGAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGTTAACACCACAGAAATaGACATCAACTCTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WVTKDEPFKMQEGQQTWELTPQK*TSTLTS Trigger: GGAGGTCAGAGTTGATGTTCATTTCTGTGGTGTTAA...CTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTCATCCTTAGTGACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCAAGTTGACACAAAACTAGCCAGTACAGTACCTATTTCTCAAGGAACTGTTCACACTGAACTGTaGTCCCCTCTGCACCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCQVDTKLASTVPISQGTVHTEL*SPLHRQ Trigger: CTGGCGGTGCAGAGGGGAGCACAGTTCAGTGTGAAC...AGTTCCTTGAGAAATAGGTACTGTACTGGCTAGTTTTGTGTCAACTTGACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| CDS-3UTR TCA 90 bp | GTGGCCACAATGATTACAGGCAGCAAGAAAGCAGAAGCAAGGAGAACTGACACCTTAACACCACAGAAATaGACATCAACTCTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VATMITGSKKAEARRTDTLTPQK*TSTLTS Trigger: GGAGGTCAGAGTTGATGTTCATTTCTGTGGTGTTAA...GGTGTCAGTTCTCCTTGCTTCTGCTTTCTTGCTGCCTGTAATCATTGTGGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
||
| CDS-3UTR CCA 90 bp | GAGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACTAAAGGATGGATGAGCCCTTGCTaGCAGTACTGCATGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EERVYSAYTSTLLFITKGWMSPC*QYCMAV Trigger: CACAGCCATGCAGTACTGCCAGCAAGGGCTCATCCA...TCCTTTAGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGGAACTCACAGTACCTTTTGCTCACAGAAGGGGTTAAGTTTAGGCAGGCCTTTTTCACAGTGCTaGCATCTGTTCCTGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SQGTHSTFCSQKGLSLGRPFSQC*HLFLSL Trigger: TAGAGACAGGAACAGATGTCAGCACTGTGAAAAAGG...CCTGCCTAAACTTAACCCCTTCTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGGAACTCACAGTACCTTTTGCTCACAGAAGGGGTTAAGTTTAGGCAGGGCTCTTGGAAAACACTaGAAAGTCCTGGTGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQGTHSTFCSQKGLSLGRALGKH*KVLVLV Trigger: TACCAACACCAGGACTTTGCAGTGTTTTCCAAGAGC...CCTGCCTAAACTTAACCCCTTCTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| CDS-3UTR GCA 90 bp | ATGTTCTTTACTGGCTTGCTTCCCCTGGCTTACTCAGCTTGCTCTCTTATAGAAGCATGGCTGTGGACATaGTCTTGGAAAACACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MFFTGLLPLAYSACSLIEAWLWT*SWKTLQ Trigger: TTGCAGTGTTTTCCAAGAGCATGTCCACAGCCATGC...TTCTATAAGAGAGCAAGCTGAGTAAGCCAGGGGAAGCAAGCCAGTAAAGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
||
| CDS-3UTR CCA 90 bp | AATATTACCAAGCACACTGACTGGGAGCAGATAGCATCGTTCCTTGGATCAGAGCTGTGGACATGCTCTTaGAAAACACTGCAAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NITKHTDWEQIASFLGSELWTCS*KTLQSP Trigger: AGGACTTTGCAGTGTTTTCCAAGAGCATGTCCACAG...CTCTGATCCAAGGAACGATGCTATCTGCTCCCAGTCAGTGTGCTTGGTAATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| CDS-3UTR TCA 90 bp | CTAGCCAGTACAGTACCTATTTCTCAAGGAACTCACAGTACCTTTTGCTCACAGCCTTTTTCACAGTGCTaGCATCTGTTCCTGTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LASTVPISQGTHSTFCSQPFSQC*HLFLSL Trigger: TAGAGACAGGAACAGATGTCAGCACTGTGAAAAAGG...CTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGAAATAGGTACTGTACTGGCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| CDS-3UTR CCA 90 bp | TTAAGTTTAGGCAGGAATGTCTGTGGCCACAATGATTACAGGCAGCAAGAAAGCCAAAGAGACATTTTCTaGAATCCGCCACAGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LSLGRNVCGHNDYRQQESQRDIF*NPPQGL Trigger: AAGACCCTGTGGCGGATTCCAGAAAATGTCTCTTTG...GCTTTCTTGCTGCCTGTAATCATTGTGGCCACAGACATTCCTGCCTAAACTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| 3UTR CAA 72 bp | GGGGAGGAAAGGGTTTATTCAGCTTACACTTCCACATaGCTGTTCATCACTAAAGGAAGTCGAGAATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GEERVYSAYTST*LFITKGSREWN Trigger: GTTCCATTCTCGACTTCCTTTAGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| CDS-3UTR CCA 90 bp | ACAGTACCTATTTCTCAAGGAACTCACAGTACCTTTTGCTCACAGAAGGGGTTACAAAGAGACATTTTCTaGAATCCGCCACAGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TVPISQGTHSTFCSQKGLQRDIF*NPPQGL Trigger: AAGACCCTGTGGCGGATTCCAGAAAATGTCTCTTTG...TAACCCCTTCTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGAAATAGGTACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| CDS-3UTR CCA 90 bp | CTGTGTCAAGTTGACACAAAACTAGCCAGTACAGTACCTATTTCTCAAGGAACTCTGTGGACATGCTCTTaGAAAACACTGCAAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LCQVDTKLASTVPISQGTLWTCS*KTLQSP Trigger: AGGACTTTGCAGTGTTTTCCAAGAGCATGTCCACAG...AGTTCCTTGAGAAATAGGTACTGTACTGGCTAGTTTTGTGTCAACTTGACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
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| 3UTR CAA 72 bp | TACAGTACCTATTTCTCAAGGAACTCACAGTACCTTTaGCTCACAGAAGGGGTTAAGTTTAGGCAGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: YSTYFSRNSQYL*LTEGVKFRQEC Trigger: ACATTCCTGCCTAAACTTAACCCCTTCTGTGAGCAAAAGGTACTGTGAGTTCCTTGAGAAATAGGTACTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| CDS-3UTR CAA 90 bp | GAGCCCTTTAAAATGCAGGAGGGACAGCAGACTTGGGAGTCTGCCCAGGGTAGGTCGGTAGTGCCGGCCTaGGCCCTGCCAGGCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: EPFKMQEGQQTWESAQGRSVVPA*ALPGLP Trigger: AGGCAAGCCTGGCAGGGCCAAGGCCGGCACTACCGA...CCTACCCTGGGCAGACTCCCAAGTCTGCTGTCCCTCCTGCATTTTAAAGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
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| CDS CCA 90 bp | TCCAGCTTAAACACGGCACCCGTGTGGGGGTGGATGAGCCCTTGCTaGCAGTACTGCATGGCTGTGGACATGCTCTTGGAAAACACTGCA | + |
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Preference number: 5 (lower is better) Translates to: SSLNTAPVWGWMSPC*QYCMAVDMLLENTA Trigger: TGCAGTGTTTTCCAAGAGCATGTCCACAGCCATGCAGTACTGCCAGCAAGGGCTCATCCACCCCCACACGGGTGCCGTGTTTAAGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000194220.2 |
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| CDS-3UTR CAA 90 bp | TTTACTGGCTTGCTTCCCCTGGCTTACTCAGCTTGCTCTCTTATAGAACCAAGATCGGTAGTGCCGGCCTaGGCCCTGCCAGGCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: FTGLLPLAYSACSLIEPRSVVPA*ALPGLP Trigger: AGGCAAGCCTGGCAGGGCCAAGGCCGGCACTACCGA...TCTTGGTTCTATAAGAGAGCAAGCTGAGTAAGCCAGGGGAAGCAAGCCAGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| CDS-3UTR CAA 90 bp | AGGAAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACTAAAGGAATCGGTAGTGCCGGCCTaGGCCCTGCCAGGCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: RKGFIQLTLPHCCSSLKESVVPA*ALPGLP Trigger: AGGCAAGCCTGGCAGGGCCAAGGCCGGCACTACCGA...TTCCTTTAGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 |
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| CDS CCA 72 bp | ATCTTCTCCAGCTTAAACACGGCACCCGTGTGGGGGTaGATGAGCCCTTGCTGGCAGTACTGCATGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: IFSSLNTAPVWG*MSPCWQYCMAV Trigger: CACAGCCATGCAGTACTGCCAGCAAGGGCTCATCCACCCCCACACGGGTGCCGTGTTTAAGCTGGAGAAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000194220.2 |
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| CDS CAA 72 bp | GGACATGCTCTTGGAAAACACTGCAAAGTCCTGGTGTaGGTAGCGACCCCAGTACAGTCCCATGGCCGAGAT | + |
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Preference number: 6 (lower is better) Translates to: GHALGKHCKVLV*VATPVQSHGRD Trigger: ATCTCGGCCATGGGACTGTACTGGGGTCGCTACCAACACCAGGACTTTGCAGTGTTTTCCAAGAGCATGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000194220.2 |
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| CDS CAA 90 bp | CATGGCTGTGGACATGCTCTTGGAAAACACTGCAAAGTCCTGGTGTaGGTAGCGACCCCAGTACAGTCCCATGGCCGAGATGTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HGCGHALGKHCKVLV*VATPVQSHGRDVLQ Trigger: CTGAAGAACATCTCGGCCATGGGACTGTACTGGGGTCGCTACCAACACCAGGACTTTGCAGTGTTTTCCAAGAGCATGTCCACAGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046743.11 |
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| CDS TCA 72 bp | GTCTTCTGGTCCGTGATGCACTGCTCCGCCATAGCATaGAAGCTACTTACTCCAATAACTCGATCTCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: VFWSVMHCSAIA*KLLTPITRSPR Trigger: CCGGGGAGATCGAGTTATTGGAGTAAGTAGCTTTCATGCTATGGCGGAGCAGTGCATCACGGACCAGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195702.2 |
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| CDS GCA 72 bp | GTACTGCATGGCTGTGGACATGCTCTTGGAAAACACTaGAAAGTCCTGGTGTTGGTAGCGACCCCAGTACAG | + |
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Preference number: 6 (lower is better) Translates to: VLHGCGHALGKH*KVLVLVATPVQ Trigger: CTGTACTGGGGTCGCTACCAACACCAGGACTTTGCAGTGTTTTCCAAGAGCATGTCCACAGCCATGCAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046743.11 ENSMUST00000194220.2 |
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| CDS CAA 90 bp | CATGGCTGTGGACATGCTCTTGGAAAACACTGCAAAGTCCTGGTGTaGGTAGCGACCCCAGTACAGTCCCATGGCCGAGATGTTCTTCAN | + |
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Preference number: 6 (lower is better) Translates to: HGCGHALGKHCKVLV*VATPVQSHGRDVLX Trigger: NTGAAGAACATCTCGGCCATGGGACTGTACTGGGGTCGCTACCAACACCAGGACTTTGCAGTGTTTTCCAAGAGCATGTCCACAGCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194220.2 |
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| CDS TCA 72 bp | GTCTTCTGGTCCGTGATGCACTGCTCCGCCATAGCATaGAAGCTACTTACTCCAATAACTCGATCTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: VFWSVMHCSAIA*KLLTPITRSPF Trigger: AAAGGGAGATCGAGTTATTGGAGTAAGTAGCTTTCATGCTATGGCGGAGCAGTGCATCACGGACCAGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046743.11 ENSMUST00000119891.7 ENSMUST00000193791.6 |
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