Pregenerated sensors for CRYZL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058240Ensembl transcript IDs: ENSMUST00000073466.13, ENSMUST00000114023.3, ENSMUST00000117644.8, ENSMUST00000122254.8, ENSMUST00000123751.2, ENSMUST00000124282.8, ENSMUST00000141664.9, ENSMUST00000144472.8, ENSMUST00000144877.3, ENSMUST00000231499.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCCTGTGGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTaGGCACCCAACAGTAGCCTCTCACCTGTGAAATGGAGCTACATT | + |
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Preference number: 1 (lower is better) Translates to: TLWCDYDSVSCSLHH*APNSSLSPVKWSYI Trigger: AATGTAGCTCCATTTCACAGGTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACACCACAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| 3UTR CCA 90 bp | CAGTATACACTGCCACTGACGACTTCATACGTCAGCTTCCAATCCTaGAAAACAAACATCAGGGAGGCCCACACAGAATGGCTACAGTAC | + |
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Preference number: 1 (lower is better) Translates to: QYTLPLTTSYVSFQS*KTNIREAHTEWLQY Trigger: GTACTGTAGCCATTCTGTGTGGGCCTCCCTGATGTTTGTTTTCCAGGATTGGAAGCTGACGTATGAAGTCGTCAGTGGCAGTGTATACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
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| 3UTR CCA 90 bp | TTCAGGAGGAGTGATGCCGCCACATGTGCACGACTAGGTGTGAGATaGCTTCAAGTTAAATGTAAAAGCTCACAAAGAGATGGGACAAAC | + |
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Preference number: 1 (lower is better) Translates to: FRRSDAATCARLGVR*LQVKCKSSQRDGTN Trigger: GTTTGTCCCATCTCTTTGTGAGCTTTTACATTTAACTTGAAGCCATCTCACACCTAGTCGTGCACATGTGGCGGCATCACTCCTCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
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| 3UTR CCA 90 bp | GCCAAGACTTTACAGTACACACAACAGACAGATTTTACTAAAATTTaGAATTTCCATAAGGTGACCAAGGCAAGACTGAAGCATTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: AKTLQYTQQTDFTKI*NFHKVTKARLKHSE Trigger: CTCTGAATGCTTCAGTCTTGCCTTGGTCACCTTATGGAAATTCCAAATTTTAGTAAAATCTGTCTGTTGTGTGTACTGTAAAGTCTTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123751.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTTGTCTCATTCTTTATCTCCCATTCAGAAGGGGTTAGACCCTGTGGTGTGGTAGCCTCTCACCTGTaGAATGGAGCTACATTACTC | + |
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Preference number: 2 (lower is better) Translates to: PLVSFFISHSEGVRPCGVVASHL*NGATLL Trigger: GAGTAATGTAGCTCCATTTCACAGGTGAGAGGCTAC...CACACCACAGGGTCTAACCCCTTCTGAATGGGAGATAAAGAATGAGACAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| 3UTR-3UTR GCA 90 bp | AAATTTCCACTTGTCTCATTCTTTATCTCCCATTCAGAAGGGGTTAGACCCTGTCTGTCTCTTGCTCCCTaGACCACTGGGCACCCAACA | + |
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Preference number: 2 (lower is better) Translates to: KFPLVSFFISHSEGVRPCLSLAP*TTGHPT Trigger: TGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAG...ACAGGGTCTAACCCCTTCTGAATGGGAGATAAAGAATGAGACAAGTGGAAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| 3UTR-3UTR GCA 90 bp | AAATTTCCACTTGTCTCATTCTTTATCTCCCATTCAGAAGGGGTTAGACCCTGTTATGACTCTGTCTCTTaGTCCCTGCACCACTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KFPLVSFFISHSEGVRPCYDSVS*SLHHWA Trigger: TGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATA...ACAGGGTCTAACCCCTTCTGAATGGGAGATAAAGAATGAGACAAGTGGAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCACTTGTCTCATTCTTTATCTCCCATTCAGAAGGGGTTAGACCCTGTGGTGCTCTCACCTGTGAAATaGAGCTACATTACTCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: FHLSHSLSPIQKGLDPVVLSPVK*SYITQA Trigger: TGCCTGAGTAATGTAGCTCCATTTCACAGGTGAGAG...CACCACAGGGTCTAACCCCTTCTGAATGGGAGATAAAGAATGAGACAAGTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGTTCGTATCTTTATTTTAGAAGCACTCAAAACACCAGCAGAGATGCCATACAGCCGTCCGGCTAAGTaGTGTGACGTCACTTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SVRIFILEALKTPAEMPYSRPAK*CDVTSV Trigger: TACAGAAGTGACGTCACATCACTTAGCCGGACGGCT...GTATGGCATCTCTGCTGGTGTTTTGAGTGCTTCTAAAATAAAGATACGAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123751.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCTTAGCAGACTGGAGGTCCTAAGTTCTATCTCTAACAACACACACTCGAGTAAGATTCTACAGCCATaGGCAATGTTAGTAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: LLSRLEVLSSISNNTHSSKILQP*AMLVNL Trigger: GAGATTTACTAACATTGCTCATGGCTGTAGAATCTT...ACTCGAGTGTGTGTTGTTAGAGATAGAACTTAGGACCTCCAGTCTGCTAAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141664.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGAGCAAGACATTTATAAATTCTGATGTGAAAGATTCTACAGCCATGAGCGCCAGAAGTATCACTTaGCTAAGGAAAGGTTATGCT | + |
|
Preference number: 2 (lower is better) Translates to: AKSKTFINSDVKDSTAMSARSIT*LRKGYA Trigger: AGCATAACCTTTCCTTAGCCAAGTGATACTTCTGGC...GCTCATGGCTGTAGAATCTTTCACATCAGAATTTATAAATGTCTTGCTCTTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141664.9 |
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| 3UTR-3UTR CCA 90 bp | GGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACAAAATCATTGCTTTATCGTCCTTaGTTTTTCTCAACAATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GINGLLRKVLRMKLITKSLLYRP*FFSTIS Trigger: GGAAATTGTTGAGAAAAACCAAGGACGATAAAGCAA...TGATTTTGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
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| 3UTR GCA 72 bp | CCCTGTGGTGTGATTATGACTCTGTCTCTTGCTCCCTaGACCACTGGGCACCCAACAGTAGCCTCTCACCTG | + |
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Preference number: 3 (lower is better) Translates to: PCGVIMTLSLAP*TTGHPTVASHL Trigger: CAGGTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACACCACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| 3UTR CCA 72 bp | AATGCTGGGCAGGCGTGTAGTAGTAGCGACCCTCTGTaGAGACTCATCCTGATGACGGTTTTCTCACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: NAGQACSSSDPL*RLILMTVFSQG Trigger: ACCCTGTGAGAAAACCGTCATCAGGATGAGTCTCCACAGAGGGTCGCTACTACTACACGCCTGCCCAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
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| 3UTR CCA 72 bp | TGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTaGGCACCCAACAGTAGCCTCTCACCTGTGAAATGG | + |
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Preference number: 3 (lower is better) Translates to: CDYDSVSCSLHH*APNSSLSPVKW Trigger: CCATTTCACAGGTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| 3UTR CCA 72 bp | TCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTaGTGTGGGTGCATCCGACTGAGATCAGGGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SQQFPKKTGFPH*CGCIRLRSGKR Trigger: TCTCTTCCCTGATCTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
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| 3UTR GCA 72 bp | TTCTCACAGGGTTCCCCTGTTCTGTTTAAGCTTCAGTaGCTAAGGCTTAAAACCTGTGCTCTCTTCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FSQGSPVLFKLQ*LRLKTCALFQR Trigger: CCTCTGGAAGAGAGCACAGGTTTTAAGCCTTAGGCACTGAAGCTTAAACAGAACAGGGGAACCCTGTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
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| 3UTR TCA 72 bp | TTAACTGACAGAGTCACATGCACTGAAGCCCACACGTaGGAAGTGAGCACACTGATGTACAGTATACACTGC | + |
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Preference number: 3 (lower is better) Translates to: LTDRVTCTEAHT*EVSTLMYSIHC Trigger: GCAGTGTATACTGTACATCAGTGTGCTCACTTCTCACGTGTGGGCTTCAGTGCATGTGACTCTGTCAGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114023.3 ENSMUST00000144877.3 |
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| 3UTR GCA 72 bp | TCAAAACACCAGCAGAGATGCCATACACACAAACTCTaGTTCATAAGCCAGGAAGGCAGACACAGTATTTTA | + |
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Preference number: 3 (lower is better) Translates to: SKHQQRCHTHKL*FISQEGRHSIL Trigger: TAAAATACTGTGTCTGCCTTCCTGGCTTATGAAGCAGAGTTTGTGTGTATGGCATCTCTGCTGGTGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123751.2 |
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| 3UTR-3UTR CAA 90 bp | ACACTCGAGTACACACACACACAAATAAGCCAAGAGCAAGACATTTATAAATTCCGCCAGAAGTATCACTaGGCTAAGGAAAGGTTATGC | + |
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Preference number: 3 (lower is better) Translates to: TLEYTHTQISQEQDIYKFRQKYH*AKERLC Trigger: GCATAACCTTTCCTTAGCCAAGTGATACTTCTGGCG...GAATTTATAAATGTCTTGCTCTTGGCTTATTTGTGTGTGTGTGTACTCGAGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141664.9 |
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| 3UTR GCA 72 bp | AGGCAGACACAGTATTTTAACTTAAATACTCCAAGCTaGCAAGACTTTACAGTACACACAACAGACAGATTT | + |
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Preference number: 3 (lower is better) Translates to: RQTQYFNLNTPS*QDFTVHTTDRF Trigger: AAATCTGTCTGTTGTGTGTACTGTAAAGTCTTGGCAGCTTGGAGTATTTAAGTTAAAATACTGTGTCTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123751.2 |
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| 3UTR CCA 72 bp | TTACAGTACACACAACAGACAGATTTTACTAAAATTTaGAATTTCCATAAGGTGACCAAGGCAAGACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: LQYTQQTDFTKI*NFHKVTKARLK Trigger: CTTCAGTCTTGCCTTGGTCACCTTATGGAAATTCCAAATTTTAGTAAAATCTGTCTGTTGTGTGTACTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123751.2 |
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| CDS-3UTR TCA 90 bp | ATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCAACAGTAGCCTCTCACCCACCGTTGCTCCCTTaGGGAAAAGGCAGTGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: MTLSLAPCTTGHPTVASHPPLLP*GKGSGY Trigger: ATAGCCACTGCCTTTTCCTCAAGGGAGCAACGGTGG...GTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR CCA 90 bp | CAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGACCTCATACAGTGGGATaGGCTCATCGAGCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: QFPKKTGFPHWCGCIRLRPHTVG*AHRAEA Trigger: GGCCTCTGCTCGATGAGCCCATCCCACTGTATGAGG...TCTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
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| CDS-3UTR CCA 90 bp | ACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGCCTCATACAGTGGGATaGGCTCATCGAGCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TISKENWLPPLVWVHPTEPHTVG*AHRAEA Trigger: GGCCTCTGCTCGATGAGCCCATCCCACTGTATGAGG...CTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
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| CDS-3UTR TCA 90 bp | ATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCAACAGTAGCCTCTCACTCACTCCTGCATCTATaGCAATATCTACTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: MTLSLAPCTTGHPTVASHSLLHL*QYLLPG Trigger: GCCTGGGAGTAGATATTGTCATAGATGCAGGAGTGA...GTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR CCA 90 bp | ATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCAACAGTAGCCTCTCACTCTGTTGTTACCCAATaGCCTCCGACACCAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: MTLSLAPCTTGHPTVASHSVVTQ*PPTPRS Trigger: ACTTCTTGGTGTCGGAGGCCATTGGGTAACAACAGA...GTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR CCA 90 bp | ACCCTGTGGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCAAGGCAGTGGCTATCTaGAGGATCCAACTGAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: TLWCDYDSVSCSLHHWAPKAVAI*RIQLKV Trigger: AACCTTCAGTTGGATCCTCCAGATAGCCACTGCCTT...GGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACACCACAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR CCA 90 bp | ACCCTGTGGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCTTGAGGAAAAGGCAGTaGCTATCTGGAGGATCCAAC | + |
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Preference number: 4 (lower is better) Translates to: TLWCDYDSVSCSLHHWAPLRKRQ*LSGGSN Trigger: GTTGGATCCTCCAGATAGCCACTGCCTTTTCCTCAA...GGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACACCACAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR TCA 90 bp | GGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCAACAGTAAGCAGCTTCCGTCCATaGCACCTTTTCTGGCTTATG | + |
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Preference number: 4 (lower is better) Translates to: GVIMTLSLAPCTTGHPTVSSFRP*HLFWLM Trigger: CATAAGCCAGAAAAGGTGTCATGGACGGAAGCTGCT...TACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR TCA 90 bp | ATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCAACAGTAGCCTCTCACTCTGGAGGATCCAACTaGAGGTTTTCTTCTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: MTLSLAPCTTGHPTVASHSGGSN*RFSSVV Trigger: AACAACAGAAGAAAACCTTCAGTTGGATCCTCCAGA...GTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR TCA 90 bp | CAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGACATCGAGCAGAGGCCTaGAAACACCAGCTGATAACT | + |
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Preference number: 4 (lower is better) Translates to: QFPKKTGFPHWCGCIRLRHRAEA*KHQLIT Trigger: AGTTATCAGCTGGTGTTTTCAGGCCTCTGCTCGATG...TCTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
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| CDS-3UTR GCA 90 bp | CAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGAGGCTATTGTGCCAAATaGACTTGCCCCGTCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: QFPKKTGFPHWCGCIRLRGYCAK*TCPVHD Trigger: ATCATGGACGGGGCAAGTGCATTTGGCACAATAGCC...TCTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
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| CDS-3UTR GCA 90 bp | ACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGGGCTATTGTGCCAAATaGACTTGCCCCGTCCATGAT | + |
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Preference number: 4 (lower is better) Translates to: TISKENWLPPLVWVHPTEGYCAK*TCPVHD Trigger: ATCATGGACGGGGCAAGTGCATTTGGCACAATAGCC...CTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
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| CDS-3UTR GCA 90 bp | CAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGAAAGGAAAGCCACCGTTaGTCCCTTGAGGAAAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QFPKKTGFPHWCGCIRLRKESHR*SLEEKA Trigger: TGCCTTTTCCTCAAGGGAGCAACGGTGGCTTTCCTT...TCTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
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| CDS-3UTR CCA 90 bp | GAAGGGGTTAGACCCTGTGGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCGGTGGGCTAACTGAATaGCTATTGTGCCAAATGCAC | + |
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Preference number: 4 (lower is better) Translates to: EGVRPCGVIMTLSLAPCTGGLTE*LLCQMH Trigger: GTGCATTTGGCACAATAGCCATTCAGTTAGCCCACC...GGTGCAGGGAGCAAGAGACAGAGTCATAATCACACCACAGGGTCTAACCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR CCA 90 bp | ACCCTGTGGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCCAGCTTTCAGCAACATaGACTTTCCCATTAGACACA | + |
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Preference number: 4 (lower is better) Translates to: TLWCDYDSVSCSLHHWAPQLSAT*TFPLDT Trigger: TGTGTCTAATGGGAAAGTCCATGTTGCTGAAAGCTG...GGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACACCACAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR CCA 90 bp | TTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGCTTTGCCTCATACAGTaGGATGGGCTCATCGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FSTISKENWLPPLVWVHPLCLIQ*DGLIEQ Trigger: CTGCTCGATGAGCCCATCCCACTGTATGAGGCAAAG...CGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
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| CDS-3UTR TCA 90 bp | TTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGAGCAGCTTCCGTCCATaGCACCTTTTCTGGCTTATG | + |
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Preference number: 4 (lower is better) Translates to: FSTISKENWLPPLVWVHPSSFRP*HLFWLM Trigger: CATAAGCCAGAAAAGGTGTCATGGACGGAAGCTGCT...CGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
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| CDS-3UTR TCA 90 bp | TTTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCCAGGCTGTGTGCTGTTaGGATAACCTTGGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: FLNNFQRKLASPTGVGASQAVCC*DNLGSS Trigger: AGAGGAGCCAAGGTTATCTCAACAGCACACAGCCTG...GGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
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| CDS-3UTR TCA 90 bp | ACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGTCACTCCTGCATCTATaGCAATATCTACTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TISKENWLPPLVWVHPTESLLHL*QYLLPG Trigger: GCCTGGGAGTAGATATTGTCATAGATGCAGGAGTGA...CTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
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| CDS-3UTR GCA 90 bp | ATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCAACAGTAGCCTCTCACAGTGTGATGATGTCATaGTTATGTGGCAGATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: MTLSLAPCTTGHPTVASHSVMMS*LCGRCN Trigger: GTTACATCTGCCACATAAGCATGACATCATCACACT...GTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
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| CDS-3UTR CCA 90 bp | CAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGGGTGGGCTAACTGAATaGCTATTGTGCCAAATGCAC | + |
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Preference number: 4 (lower is better) Translates to: QQFPKKTGFPHWCGCIRLGGLTE*LLCQMH Trigger: GTGCATTTGGCACAATAGCCATTCAGTTAGCCCACC...CAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
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| CDS-3UTR CCA 90 bp | CAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGTCTGTTGTTACCCAATaGCCTCCGACACCAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QQFPKKTGFPHWCGCIRLSVVTQ*PPTPRS Trigger: ACTTCTTGGTGTCGGAGGCCATTGGGTAACAACAGA...CAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
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| CDS-3UTR CCA 90 bp | CAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGAAAGGCAGTGGCTATCTaGAGGATCCAACTGAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QFPKKTGFPHWCGCIRLRKAVAI*RIQLKV Trigger: AACCTTCAGTTGGATCCTCCAGATAGCCACTGCCTT...TCTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
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| CDS-3UTR CCA 90 bp | CAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAAGGCAGTGGCTATCTaGAGGATCCAACTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QQFPKKTGFPHWCGCIRLKAVAI*RIQLKV Trigger: AACCTTCAGTTGGATCCTCCAGATAGCCACTGCCTT...CAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCCTTTGCCTCATACAGTaGGATGGGCTCATCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLNNFQRKLASPTGVGASLCLIQ*DGLIEQ Trigger: CTGCTCGATGAGCCCATCCCACTGTATGAGGCAAAG...GGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCAGCAGCTTCCGTCCATaGCACCTTTTCTGGCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: FLNNFQRKLASPTGVGASSSFRP*HLFWLM Trigger: CATAAGCCAGAAAAGGTGTCATGGACGGAAGCTGCT...GGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTGTCTCATTCTTTATCTCCCATTCAGAAGGGGTTAGACCCTGTGGTGTGGGCTATTGTGCCAAATaGACTTGCCCCGTCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVSFFISHSEGVRPCGVGYCAK*TCPVHD Trigger: ATCATGGACGGGGCAAGTGCATTTGGCACAATAGCC...CACACCACAGGGTCTAACCCCTTCTGAATGGGAGATAAAGAATGAGACAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTGTCTCATTCTTTATCTCCCATTCAGAAGGGGTTAGACCCTGTGGTGTGAAGGAAAGCCACCGTTaGTCCCTTGAGGAAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLVSFFISHSEGVRPCGVKESHR*SLEEKA Trigger: TGCCTTTTCCTCAAGGGAGCAACGGTGGCTTTCCTT...CACACCACAGGGTCTAACCCCTTCTGAATGGGAGATAAAGAATGAGACAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGCTCACAAAGAGATGGGACAAACTTGTTTCCCTCTATAGCAGTACAGAGGCAGGAACCCACCTCCTaGATCTGCTCGGTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSSQRDGTNLFPSIAVQRQEPTS*ICSVLR Trigger: CCTGAGAACCGAGCAGATGCAGGAGGTGGGTTCCTG...CCTCTGTACTGCTATAGAGGGAAACAAGTTTGTCCCATCTCTTTGTGAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGGGTGGGCTAACTGAATaGCTATTGTGCCAAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSTISKENWLPPLVWVHPGGLTE*LLCQMH Trigger: GTGCATTTGGCACAATAGCCATTCAGTTAGCCCACC...CGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGTGGAGACTCATCCTGATGACGGTTTTCTCACAGGGTTCCCCTGTTCTGCAGCTTTCAGCAACATaGACTTTCCCATTAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: PLWRLILMTVFSQGSPVLQLSAT*TFPLDT Trigger: TGTGTCTAATGGGAAAGTCCATGTTGCTGAAAGCTG...CAGAACAGGGGAACCCTGTGAGAAAACCGTCATCAGGATGAGTCTCCACAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
||
| CDS-3UTR TCA 90 bp | GCAAGCAAGGTATGTCTCATGATAATTCTAAGCAGCCTGGCTTCATACAACGGGAGCAGCTTCCGTCCATaGCACCTTTTCTGGCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: ASKVCLMIILSSLASYNGSSFRP*HLFWLM Trigger: CATAAGCCAGAAAAGGTGTCATGGACGGAAGCTGCT...CCCGTTGTATGAAGCCAGGCTGCTTAGAATTATCATGAGACATACCTTGCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114023.3 |
||
| CDS-3UTR TCA 90 bp | ACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGTCTGGAGGATCCAACTaGAGGTTTTCTTCTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TISKENWLPPLVWVHPTESGGSN*RFSSVV Trigger: AACAACAGAAGAAAACCTTCAGTTGGATCCTCCAGA...CTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CCA 90 bp | CAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGCAGCTTTCAGCAACATaGACTTTCCCATTAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: QQFPKKTGFPHWCGCIRLQLSAT*TFPLDT Trigger: TGTGTCTAATGGGAAAGTCCATGTTGCTGAAAGCTG...CAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGCAGCTTTCAGCAACATaGACTTTCCCATTAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: TISKENWLPPLVWVHPTEQLSAT*TFPLDT Trigger: TGTGTCTAATGGGAAAGTCCATGTTGCTGAAAGCTG...CTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCTCTGTTGTTACCCAATaGCCTCCGACACCAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLNNFQRKLASPTGVGASSVVTQ*PPTPRS Trigger: ACTTCTTGGTGTCGGAGGCCATTGGGTAACAACAGA...GGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCTTGAGGAAAAGGCAGTaGCTATCTGGAGGATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLNNFQRKLASPTGVGASLRKRQ*LSGGSN Trigger: GTTGGATCCTCCAGATAGCCACTGCCTTTTCCTCAA...GGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR GCA 90 bp | CAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGTGTGATGATGTCATaGTTATGTGGCAGATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQFPKKTGFPHWCGCIRLSVMMS*LCGRCN Trigger: GTTACATCTGCCACATAAGCATGACATCATCACACT...CAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGAGCTTTGTGTTTATGTaGCTCAGGGCACAAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FSTISKENWLPPLVWVHPSFVFM*LRAQAL Trigger: TAAAGCTTGTGCCCTGAGCCACATAAACACAAAGCT...CGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CCA 90 bp | CAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGATCTGAACAACTTCCATaGAAACCTTTGCCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: QFPKKTGFPHWCGCIRLRSEQLP*KPLPHT Trigger: TGTATGAGGCAAAGGTTTCCATGGAAGTTGTTCAGA...TCTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CCA 90 bp | CAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGTCTGAACAACTTCCATaGAAACCTTTGCCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: QQFPKKTGFPHWCGCIRLSEQLP*KPLPHT Trigger: TGTATGAGGCAAAGGTTTCCATGGAAGTTGTTCAGA...CAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR TCA 90 bp | CAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGAACCTTTTCTGGCTTATaGACCTCTAATACAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QFPKKTGFPHWCGCIRLRTFSGL*TSNTIP Trigger: TGGAATTGTATTAGAGGTTCATAAGCCAGAAAAGGT...TCTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122254.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGAGTGTGATGATGTCATaGTTATGTGGCAGATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSTISKENWLPPLVWVHPSVMMS*LCGRCN Trigger: GTTACATCTGCCACATAAGCATGACATCATCACACT...CGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTGTTTAAGCTTCAGTGCCTAAGGCTTAAAACCTGTGCTCTCTTCCAGAGGCAGGTACCCACCTCCTaGATCTATGACAATATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLFKLQCLRLKTCALFQRQVPTS*IYDNIY Trigger: GTAGATATTGTCATAGATGCAGGAGGTGGGTACCTG...CCTCTGGAAGAGAGCACAGGTTTTAAGCCTTAGGCACTGAAGCTTAAACAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCAGCTTTGTGTTTATGTaGCTCAGGGCACAAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLNNFQRKLASPTGVGASSFVFM*LRAQAL Trigger: TAAAGCTTGTGCCCTGAGCCACATAAACACAAAGCT...GGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGCTTTATCGTCCTTGGTTTTTCTCAACAATTTCCAAAGAAAACTGGCTTCCCACCGTTGCTCCCTTaGGGAAAAGGCAGTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SCFIVLGFSQQFPKKTGFPPLLP*GKGSGY Trigger: ATAGCCACTGCCTTTTCCTCAAGGGAGCAACGGTGG...GAAGCCAGTTTTCTTTGGAAATTGTTGAGAAAAACCAAGGACGATAAAGCAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR TCA 90 bp | GGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACAAAATCACCACCGTTGCTCCCTTaGGGAAAAGGCAGTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GINGLLRKVLRMKLITKSPPLLP*GKGSGY Trigger: ATAGCCACTGCCTTTTCCTCAAGGGAGCAACGGTGG...TGATTTTGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGAAGCAAGCAAGGTATGTCTCATGATAATTCTAAGCAGCCTGGCTTCATAGGCTATTGTGCCAAATaGACTTGCCCCGTCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: FGSKQGMSHDNSKQPGFIGYCAK*TCPVHD Trigger: ATCATGGACGGGGCAAGTGCATTTGGCACAATAGCC...TATGAAGCCAGGCTGCTTAGAATTATCATGAGACATACCTTGCTTGCTTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114023.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCAAGCAAGGTATGTCTCATGATAATTCTAAGCAGCCTGGCTTCATACAACGGTGGGCTAACTGAATaGCTATTGTGCCAAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EASKVCLMIILSSLASYNGGLTE*LLCQMH Trigger: GTGCATTTGGCACAATAGCCATTCAGTTAGCCCACC...GTTGTATGAAGCCAGGCTGCTTAGAATTATCATGAGACATACCTTGCTTGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114023.3 |
||
| 3UTR CAA 72 bp | GTTAAATGTAAAAGCTCACAAAGAGATGGGACAAACTaGTTTCCCTCTATAGCAGTACAGAGGTCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VKCKSSQRDGTN*FPSIAVQRSAV Trigger: GACGGCTGACCTCTGTACTGCTATAGAGGGAAACAAGTTTGTCCCATCTCTTTGTGAGCTTTTACATTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCAAGCAAGGTATGTCTCATGATAATTCTAAGCAGCCTGGCTTCATACAACAGCTTTGTGTTTATGTaGCTCAGGGCACAAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EASKVCLMIILSSLASYNSFVFM*LRAQAL Trigger: TAAAGCTTGTGCCCTGAGCCACATAAACACAAAGCT...GTTGTATGAAGCCAGGCTGCTTAGAATTATCATGAGACATACCTTGCTTGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114023.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCAAGCAAGGTATGTCTCATGATAATTCTAAGCAGCCTGGCTTCATACAACCAGCTTTCAGCAACATaGACTTTCCCATTAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: EASKVCLMIILSSLASYNQLSAT*TFPLDT Trigger: TGTGTCTAATGGGAAAGTCCATGTTGCTGAAAGCTG...GTTGTATGAAGCCAGGCTGCTTAGAATTATCATGAGACATACCTTGCTTGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114023.3 ENSMUST00000144877.3 |
||
| CDS-3UTR CCA 90 bp | AATAATGGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACACTTTGCCTCATACAGTaGGATGGGCTCATCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NNGINGLLRKVLRMKLITLCLIQ*DGLIEQ Trigger: CTGCTCGATGAGCCCATCCCACTGTATGAGGCAAAG...TGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCCATTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGCTTTATCGTCCTTGGTTTTTCTCAACAATTTCCAAAGAAAACTGGCTTCTCACTCCTGCATCTATaGCAATATCTACTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCFIVLGFSQQFPKKTGFSLLHL*QYLLPG Trigger: GCCTGGGAGTAGATATTGTCATAGATGCAGGAGTGA...GAAGCCAGTTTTCTTTGGAAATTGTTGAGAAAAACCAAGGACGATAAAGCAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR TCA 90 bp | AATAATGGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACACATCGAGCAGAGGCCTaGAAACACCAGCTGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: NNGINGLLRKVLRMKLITHRAEA*KHQLIT Trigger: AGTTATCAGCTGGTGTTTTCAGGCCTCTGCTCGATG...TGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCCATTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR GCA 90 bp | AATAATGGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACAGGCTATTGTGCCAAATaGACTTGCCCCGTCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: NNGINGLLRKVLRMKLITGYCAK*TCPVHD Trigger: ATCATGGACGGGGCAAGTGCATTTGGCACAATAGCC...TGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCCATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTTTATCGTCCTTGGTTTTTCTCAACAATTTCCAAAGAAAACTGGCTTCTTCCATGGAAACCTTTaGCTCATACAGTGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCFIVLGFSQQFPKKTGFFHGNL*LIQWDG Trigger: CCCATCCCACTGTATGAGGCAAAGGTTTCCATGGAA...GAAGCCAGTTTTCTTTGGAAATTGTTGAGAAAAACCAAGGACGATAAAGCAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTCCACTTGTCTCATTCTTTATCTCCCATTCAGAAGGGGTTAGACCCTGTAGCTTTGTGTTTATGTaGCTCAGGGCACAAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KFPLVSFFISHSEGVRPCSFVFM*LRAQAL Trigger: TAAAGCTTGTGCCCTGAGCCACATAAACACAAAGCT...ACAGGGTCTAACCCCTTCTGAATGGGAGATAAAGAATGAGACAAGTGGAAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTTTATCGTCCTTGGTTTTTCTCAACAATTTCCAAAGAAAACTGGCTTCGGTGGGCTAACTGAATaGCTATTGTGCCAAATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCFIVLGFSQQFPKKTGFGGLTE*LLCQMH Trigger: GTGCATTTGGCACAATAGCCATTCAGTTAGCCCACC...GAAGCCAGTTTTCTTTGGAAATTGTTGAGAAAAACCAAGGACGATAAAGCAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR GCA 90 bp | AATAATGGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACATTCCATGGAAACCTTTaGCTCATACAGTGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NNGINGLLRKVLRMKLITFHGNL*LIQWDG Trigger: CCCATCCCACTGTATGAGGCAAAGGTTTCCATGGAA...TGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCCATTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR TCA 90 bp | GGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACAAAATCATCTGGAGGATCCAACTaGAGGTTTTCTTCTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GINGLLRKVLRMKLITKSSGGSN*RFSSVV Trigger: AACAACAGAAGAAAACCTTCAGTTGGATCCTCCAGA...TGATTTTGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CCA 90 bp | GGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACAAAATCAAGCTTTGTGTTTATGTaGCTCAGGGCACAAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GINGLLRKVLRMKLITKSSFVFM*LRAQAL Trigger: TAAAGCTTGTGCCCTGAGCCACATAAACACAAAGCT...TGATTTTGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTTTATCGTCCTTGGTTTTTCTCAACAATTTCCAAAGAAAACTGGCTTCTCTGAACAACTTCCATaGAAACCTTTGCCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: SCFIVLGFSQQFPKKTGFSEQLP*KPLPHT Trigger: TGTATGAGGCAAAGGTTTCCATGGAAGTTGTTCAGA...GAAGCCAGTTTTCTTTGGAAATTGTTGAGAAAAACCAAGGACGATAAAGCAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS TCA 90 bp | GCAGGCTCGGACTCCGTCCCGGATGACGCCAGCAGCTTCCGTCCATaGCACCTTTTCTGGCTTATGAACCAGGTAATGCTCATGTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: AGSDSVPDDASSFRP*HLFWLMNQVMLMYS Trigger: CGAGTACATGAGCATTACCTGGTTCATAAGCCAGAAAAGGTGTCATGGACGGAAGCTGCTGGCGTCATCCGGGACGGAGTCCGAGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000231499.2 |
||
| CDS GCA 90 bp | GGAACCCACCTCCTGCATCTGCTCGGTTCTCAGGTACCCACCTCCTaGATCTATGACAATATCTACTCCCAGGCCACCTGTTTCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTHLLHLLGSQVPTS*IYDNIYSQATCFLQ Trigger: TTGGAGGAAACAGGTGGCCTGGGAGTAGATATTGTCATAGATGCAGGAGGTGGGTACCTGAGAACCGAGCAGATGCAGGAGGTGGGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
||
| CDS-3UTR CAA 90 bp | GAAGGGGTTAGACCCTGTGGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCGCTGTTGAGATAACCTaGGCTCCTCTGTGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGVRPCGVIMTLSLAPCTAVEIT*APLWWA Trigger: AGCCCACCACAGAGGAGCCAAGGTTATCTCAACAGC...GGTGCAGGGAGCAAGAGACAGAGTCATAATCACACCACAGGGTCTAACCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTGTGGAGACTCATCCTGATGACGGTTTTCTCACAGGGTTCCCCTGTTCTGGCTGTTGAGATAACCTaGGCTCCTCTGTGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLWRLILMTVFSQGSPVLAVEIT*APLWWA Trigger: AGCCCACCACAGAGGAGCCAAGGTTATCTCAACAGC...CAGAACAGGGGAACCCTGTGAGAAAACCGTCATCAGGATGAGTCTCCACAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
||
| CDS TCA 90 bp | GAGAAAGATAATACAGAGCTGTGCAGGCTCGGACTCCGTCCCGGATaGCGCCAGCAGCTTCCGTCCATGACACCTTTTCTGGCTTATGAA | + |
|
Preference number: 5 (lower is better) Translates to: EKDNTELCRLGLRPG*RQQLPSMTPFLAYE Trigger: TTCATAAGCCAGAAAAGGTGTCATGGACGGAAGCTGCTGGCGTCATCCGGGACGGAGTCCGAGCCTGCACAGCTCTGTATTATCTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000122254.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000231499.2 |
||
| CDS-3UTR CAA 90 bp | ACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGGCTGTTGAGATAACCTaGGCTCCTCTGTGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TISKENWLPPLVWVHPTEAVEIT*APLWWA Trigger: AGCCCACCACAGAGGAGCCAAGGTTATCTCAACAGC...CTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS TCA 90 bp | CTGTGTGCTGTTGAGATAACCTTGGCTCCTCTGTGGTGGGCTAACTaGATGGCTATTGTGCCAAATGCACTTGCCCCGTCCATGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCAVEITLAPLWWAN*MAIVPNALAPSMIS Trigger: GCTGATCATGGACGGGGCAAGTGCATTTGGCACAATAGCCATTCAGTTAGCCCACCACAGAGGAGCCAAGGTTATCTCAACAGCACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000122254.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000231499.2 |
||
| CDS TCA 90 bp | CCTCCTGCATCTGCTCGGTTCTCAGGTACCCACCTCCTGCATCTATaGCAATATCTACTCCCAGGCCACCTGTTTCCTCCAAACAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PPASARFSGTHLLHL*QYLLPGHLFPPNSF Trigger: AAAGCTGTTTGGAGGAAACAGGTGGCCTGGGAGTAGATATTGTCATAGATGCAGGAGGTGGGTACCTGAGAACCGAGCAGATGCAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144877.3 |
||
| CDS CCA 90 bp | ACCCTGTGGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTaGGCACCCAACAGTAGCCTCTCACCTGAAGGTTTTCTTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLWCDYDSVSCSLHH*APNSSLSPEGFLLL Trigger: CAACAGAAGAAAACCTTCAGGTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACACCACAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144472.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGGCTGTTGAGATAACCTaGGCTCCTCTGTGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSTISKENWLPPLVWVHPAVEIT*APLWWA Trigger: AGCCCACCACAGAGGAGCCAAGGTTATCTCAACAGC...CGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTGTGGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCCTTTCCAGGAGAGAGTaGAGAAAGATAATACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLWCDYDSVSCSLHHWAPLSRRE*RKIIQS Trigger: GCTCTGTATTATCTTTCTCAACTCTCTCCTGGAAAG...GGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACACCACAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTGGGCACCCAACAGTAGAAGGTTTTCTTCTGTaGTTACCCAATGGCCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GVIMTLSLAPCTTGHPTVEGFLL*LPNGLR Trigger: TCGGAGGCCATTGGGTAACAACAGAAGAAAACCTTC...TACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
||
| CDS-3UTR CAA 90 bp | ACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGGAAGGTTTTCTTCTGTaGTTACCCAATGGCCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TISKENWLPPLVWVHPTEEGFLL*LPNGLR Trigger: TCGGAGGCCATTGGGTAACAACAGAAGAAAACCTTC...CTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCCTTCCATGGAAACCTTaGCCTCATACAGTGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: FLNNFQRKLASPTGVGASLPWKP*PHTVGW Trigger: CCATCCCACTGTATGAGGCAAAGGTTTCCATGGAAG...GGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS CCA 90 bp | TTTTCTGAACAACTTCCATGGAAACCTTTGCCTCATACAGTGGGATaGGCTCATCGAGCAGAGGCCTATAGAAGGCCTAAGCCTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSEQLPWKPLPHTVG*AHRAEAYRRPKPFK Trigger: CTTGAAAGGCTTAGGCCTTCTATAGGCCTCTGCTCGATGAGCCCATCCCACTGTATGAGGCAAAGGTTTCCATGGAAGTTGTTCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122254.8 |
||
| CDS-3UTR CAA 90 bp | CAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGCTTTCCAGGAGAGAGTaGAGAAAGATAATACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QQFPKKTGFPHWCGCIRLLSRRE*RKIIQS Trigger: GCTCTGTATTATCTTTCTCAACTCTCTCCTGGAAAG...CAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAAGCAAGGTATGTCTCATGATAATTCTAAGCAGCCTGGCTTCATACAACGCTGTTGAGATAACCTaGGCTCCTCTGTGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EASKVCLMIILSSLASYNAVEIT*APLWWA Trigger: AGCCCACCACAGAGGAGCCAAGGTTATCTCAACAGC...GTTGTATGAAGCCAGGCTGCTTAGAATTATCATGAGACATACCTTGCTTGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114023.3 ENSMUST00000144877.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGAAGGTTTTCTTCTGTaGTTACCCAATGGCCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FLNNFQRKLASPTGVGASEGFLL*LPNGLR Trigger: TCGGAGGCCATTGGGTAACAACAGAAGAAAACCTTC...GGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS TCA 90 bp | TCTTCGGAATCCAAAGGCAGAATTCCGACCACTTCGTCGTCTGGCTaGAAGAACGTTACCTTCCTGCCAACCTCTAATACAATTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSESKGRIPTTSSSG*KNVTFLPTSNTIPE Trigger: TTCTGGAATTGTATTAGAGGTTGGCAGGAAGGTAACGTTCTTTCAGCCAGACGACGAAGTGGTCGGAATTCTGCCTTTGGATTCCGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000124282.8 ENSMUST00000141664.9 ENSMUST00000231499.2 |
||
| CDS TCA 90 bp | GGGCTAACTGAATGGCTATTGTGCCAAATGCACTTGCCCCGTCCATaGTCAGCACAGACTTTCCAGGAGAGAGTTGAGAAAGATAATACA | + |
|
Preference number: 5 (lower is better) Translates to: GLTEWLLCQMHLPRP*SAQTFQERVEKDNT Trigger: TGTATTATCTTTCTCAACTCTCTCCTGGAAAGTCTGTGCTGATCATGGACGGGGCAAGTGCATTTGGCACAATAGCCATTCAGTTAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000122254.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000231499.2 |
||
| CDS GCA 90 bp | GAATTCCGACCACTTCGTCGTCTGGCTGAAAGAACGTTACCTTCCTaGCAACCTCTAATACAATTCCAGAAACTTCTCTTCCAACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EFRPLRRLAERTLPS*QPLIQFQKLLFQQG Trigger: TCCCTGTTGGAAGAGAAGTTTCTGGAATTGTATTAGAGGTTGGCAGGAAGGTAACGTTCTTTCAGCCAGACGACGAAGTGGTCGGAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000124282.8 ENSMUST00000141664.9 ENSMUST00000231499.2 |
||
| CDS CCA 90 bp | TTGATTTTTCTGAACAACTTCCATGGAAACCTTTGCCTCATACAGTaGGATGGGCTCATCGAGCAGAGGCCTATAGAAGGCCTAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIFLNNFHGNLCLIQ*DGLIEQRPIEGLSL Trigger: AAGGCTTAGGCCTTCTATAGGCCTCTGCTCGATGAGCCCATCCCACTGTATGAGGCAAAGGTTTCCATGGAAGTTGTTCAGAAAAATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122254.8 |
||
| CDS-3UTR CAA 90 bp | CAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGGGCACAAGCTTTAACTaGAACTCTCACAAAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: QQFPKKTGFPHWCGCIRLGTSFN*NSHKVI Trigger: GATAACTTTGTGAGAGTTCAAGTTAAAGCTTGTGCC...CAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CAA 90 bp | CAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGACTGAGAGGCACAAGCTTTAACTaGAACTCTCACAAAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: QFPKKTGFPHWCGCIRLRGTSFN*NSHKVI Trigger: GATAACTTTGTGAGAGTTCAAGTTAAAGCTTGTGCC...TCTCAGTCGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGCTTTCCAGGAGAGAGTaGAGAAAGATAATACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSTISKENWLPPLVWVHPLSRRE*RKIIQS Trigger: GCTCTGTATTATCTTTCTCAACTCTCTCCTGGAAAG...CGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGCAAGGTATGTCTCATGATAATTCTAAGCAGCCTGGCTTCATACAACGGGCTTTCCAGGAGAGAGTaGAGAAAGATAATACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASKVCLMIILSSLASYNGLSRRE*RKIIQS Trigger: GCTCTGTATTATCTTTCTCAACTCTCTCCTGGAAAG...CCCGTTGTATGAAGCCAGGCTGCTTAGAATTATCATGAGACATACCTTGCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114023.3 |
||
| CDS-3UTR CAA 90 bp | GGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACAAAATCAGCTGTTGAGATAACCTaGGCTCCTCTGTGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GINGLLRKVLRMKLITKSAVEIT*APLWWA Trigger: AGCCCACCACAGAGGAGCCAAGGTTATCTCAACAGC...TGATTTTGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCAACAATTTCCAAAGAAAACTGGCTTCCCCCACTGGTGTGGGTGCATCCGTTCCCTGTTGTGCATTaGACAAATTCCAAACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSTISKENWLPPLVWVHPFPVVH*TNSKLH Trigger: ATGAAGTTTGGAATTTGTCAAATGCACAACAGGGAA...CGGATGCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CAA 90 bp | TTCCACTTGTCTCATTCTTTATCTCCCATTCAGAAGGGGTTAGACCCTGTGGTGGGCACAAGCTTTAACTaGAACTCTCACAAAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: FHLSHSLSPIQKGLDPVVGTSFN*NSHKVI Trigger: GATAACTTTGTGAGAGTTCAAGTTAAAGCTTGTGCC...CACCACAGGGTCTAACCCCTTCTGAATGGGAGATAAAGAATGAGACAAGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
||
| CDS-3UTR CAA 90 bp | CCACTTGTCTCATTCTTTATCTCCCATTCAGAAGGGGTTAGACCCTGTGGTGTGTTCCCTGTTGTGCATTaGACAAATTCCAAACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLVSFFISHSEGVRPCGVFPVVH*TNSKLH Trigger: ATGAAGTTTGGAATTTGTCAAATGCACAACAGGGAA...CACACCACAGGGTCTAACCCCTTCTGAATGGGAGATAAAGAATGAGACAAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124282.8 |
||
| CDS-3UTR CAA 90 bp | GGCATCAACGGTTTGTTAAGGAAGGTGTTGAGAATGAAGTTGATAACAAAATCACTTCCATGGAAACCTTaGCCTCATACAGTGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GINGLLRKVLRMKLITKSLPWKP*PHTVGW Trigger: CCATCCCACTGTATGAGGCAAAGGTTTCCATGGAAG...TGATTTTGTTATCAACTTCATTCTCAACACCTTCCTTAACAAACCGTTGATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAAGCAAGGTATGTCTCATGATAATTCTAAGCAGCCTGGCTTCATACAACGGCACAAGCTTTAACTaGAACTCTCACAAAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: EASKVCLMIILSSLASYNGTSFN*NSHKVI Trigger: GATAACTTTGTGAGAGTTCAAGTTAAAGCTTGTGCC...GTTGTATGAAGCCAGGCTGCTTAGAATTATCATGAGACATACCTTGCTTGCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114023.3 |
||
| CDS-3UTR CAA 90 bp | TCTTGCTTTATCGTCCTTGGTTTTTCTCAACAATTTCCAAAGAAAACTGGCTTCGGCACAAGCTTTAACTaGAACTCTCACAAAGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: SCFIVLGFSQQFPKKTGFGTSFN*NSHKVI Trigger: GATAACTTTGTGAGAGTTCAAGTTAAAGCTTGTGCC...GAAGCCAGTTTTCTTTGGAAATTGTTGAGAAAAACCAAGGACGATAAAGCAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000122254.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGCTTTATCGTCCTTGGTTTTTCTCAACAATTTCCAAAGAAAACTGGCTTCTTCCCTGTTGTGCATTaGACAAATTCCAAACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SCFIVLGFSQQFPKKTGFFPVVH*TNSKLH Trigger: ATGAAGTTTGGAATTTGTCAAATGCACAACAGGGAA...GAAGCCAGTTTTCTTTGGAAATTGTTGAGAAAAACCAAGGACGATAAAGCAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS TCA 72 bp | AATACAGAGCTGTGCAGGCTCGGACTCCGTCCCGGATaGCGCCAGCAGCTTCCGTCCATGACACCTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NTELCRLGLRPG*RQQLPSMTPFL Trigger: CAGAAAAGGTGTCATGGACGGAAGCTGCTGGCGTCATCCGGGACGGAGTCCGAGCCTGCACAGCTCTGTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000122254.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000231499.2 |
||
| CDS TCA 72 bp | GACTCCGTCCCGGATGACGCCAGCAGCTTCCGTCCATaGCACCTTTTCTGGCTTATGAACCAGGTAATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DSVPDDASSFRP*HLFWLMNQVML Trigger: GAGCATTACCTGGTTCATAAGCCAGAAAAGGTGTCATGGACGGAAGCTGCTGGCGTCATCCGGGACGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000231499.2 |
||
| CDS TCA 72 bp | GTTGAGATAACCTTGGCTCCTCTGTGGTGGGCTAACTaGATGGCTATTGTGCCAAATGCACTTGCCCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VEITLAPLWWAN*MAIVPNALAPS Trigger: GGACGGGGCAAGTGCATTTGGCACAATAGCCATTCAGTTAGCCCACCACAGAGGAGCCAAGGTTATCTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000122254.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000231499.2 |
||
| CDS CAA 90 bp | ATCGAGCAGAGGCCTATAGAAGGCCTAAGCCTTTCAAGATGTTGCTaGTCCTCCAGGCTGTGTGCTGTTGAGATAACCTTGGCTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: IEQRPIEGLSLSRCC*SSRLCAVEITLAPL Trigger: CAGAGGAGCCAAGGTTATCTCAACAGCACACAGCCTGGAGGACAAGCAACATCTTGAAAGGCTTAGGCCTTCTATAGGCCTCTGCTCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122254.8 |
||
| CDS CCA 72 bp | CTGAACAACTTCCATGGAAACCTTTGCCTCATACAGTaGGATGGGCTCATCGAGCAGAGGCCTGAAAACACC | + |
|
Preference number: 6 (lower is better) Translates to: LNNFHGNLCLIQ*DGLIEQRPENT Trigger: GGTGTTTTCAGGCCTCTGCTCGATGAGCCCATCCCACTGTATGAGGCAAAGGTTTCCATGGAAGTTGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 |
||
| CDS CCA 72 bp | CTGAACAACTTCCATGGAAACCTTTGCCTCATACAGTaGGATGGGCTCATCGAGCAGAGGCCTATAGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LNNFHGNLCLIQ*DGLIEQRPIEG Trigger: GCCTTCTATAGGCCTCTGCTCGATGAGCCCATCCCACTGTATGAGGCAAAGGTTTCCATGGAAGTTGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122254.8 |
||
| CDS CCA 72 bp | TGTGATTATGACTCTGTCTCTTGCTCCCTGCACCACTaGGCACCCAACAGTAGCCTCTCACCTGAAGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CDYDSVSCSLHH*APNSSLSPEGF Trigger: AAAACCTTCAGGTGAGAGGCTACTGTTGGGTGCCCAGTGGTGCAGGGAGCAAGAGACAGAGTCATAATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144472.8 |
||
| CDS CAA 90 bp | TCAATCACACGGGCTATAGAAGGCCTAAGCCTTTCAAGATGTTGCTaGTCCTCCAGGCTGTGTGCTGTTGAGATAACCTTGGCTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SITRAIEGLSLSRCC*SSRLCAVEITLAPL Trigger: CAGAGGAGCCAAGGTTATCTCAACAGCACACAGCCTGGAGGACAAGCAACATCTTGAAAGGCTTAGGCCTTCTATAGCCCGTGTGATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000144877.3 ENSMUST00000231499.2 |
||
| CDS GCA 72 bp | ACACGGGCTATAGAAGGCCTAAGCCTTTCAAGATGTTaGTTGTCCTCCAGGCTGTGTGCTGTTGAGATAACC | + |
|
Preference number: 6 (lower is better) Translates to: TRAIEGLSLSRC*LSSRLCAVEIT Trigger: GGTTATCTCAACAGCACACAGCCTGGAGGACAAGCAACATCTTGAAAGGCTTAGGCCTTCTATAGCCCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000144877.3 ENSMUST00000231499.2 |
||
| CDS GCA 72 bp | CAGAGGCCTATAGAAGGCCTAAGCCTTTCAAGATGTTaGTTGTCCTCCAGGCTGTGTGCTGTTGAGATAACC | + |
|
Preference number: 6 (lower is better) Translates to: QRPIEGLSLSRC*LSSRLCAVEIT Trigger: GGTTATCTCAACAGCACACAGCCTGGAGGACAAGCAACATCTTGAAAGGCTTAGGCCTTCTATAGGCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122254.8 |
||
| CDS CAA 72 bp | CGGGCTATAGAAGGCCTAAGCCTTTCAAGATGTTGCTaGTCCTCCAGGCTGTGTGCTGTTGAGATAACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RAIEGLSLSRCC*SSRLCAVEITL Trigger: CAAGGTTATCTCAACAGCACACAGCCTGGAGGACAAGCAACATCTTGAAAGGCTTAGGCCTTCTATAGCCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000144877.3 ENSMUST00000231499.2 |
||
| CDS TCA 72 bp | GAATGGCTATTGTGCCAAATGCACTTGCCCCGTCCATaGTCAGCACAGACTTTCCAGGAGAGAGTTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: EWLLCQMHLPRP*SAQTFQERVEK Trigger: TTTCTCAACTCTCTCCTGGAAAGTCTGTGCTGATCATGGACGGGGCAAGTGCATTTGGCACAATAGCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000122254.8 ENSMUST00000124282.8 ENSMUST00000144472.8 ENSMUST00000231499.2 |
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| CDS CAA 72 bp | CAAACTTCATCATTAAGGAAAGCCACCGTTGCTCCCTaGAGGAAAAGGCAGTGGCTATCTGGAGGATCCAAC | + |
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Preference number: 6 (lower is better) Translates to: QTSSLRKATVAP*RKRQWLSGGSN Trigger: GTTGGATCCTCCAGATAGCCACTGCCTTTTCCTCAAGGGAGCAACGGTGGCTTTCCTTAATGATGAAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000124282.8 |
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| CDS CAA 72 bp | AGGCCTATAGAAGGCCTAAGCCTTTCAAGATGTTGCTaGTCCTCCAGGCTGTGTGCTGTTGAGATAACCTTG | + |
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Preference number: 6 (lower is better) Translates to: RPIEGLSLSRCC*SSRLCAVEITL Trigger: CAAGGTTATCTCAACAGCACACAGCCTGGAGGACAAGCAACATCTTGAAAGGCTTAGGCCTTCTATAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122254.8 |
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| CDS GCA 72 bp | CAAATTCCAAACTTCATCATTAAGGAAAGCCACCGTTaGTCCCTTGAGGAAAAGGCAGTGGCTATCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QIPNFIIKESHR*SLEEKAVAIWR Trigger: CCTCCAGATAGCCACTGCCTTTTCCTCAAGGGAGCAACGGTGGCTTTCCTTAATGATGAAGTTTGGAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073466.13 ENSMUST00000117644.8 ENSMUST00000124282.8 |
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| CDS GCA 72 bp | CCACTTCGTCGTCTGGCTGAAAGAACGTTACCTTCCTaGCAACCTCTAATACAATTCCAGAAACTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLRRLAERTLPS*QPLIQFQKLLF Trigger: GAAGAGAAGTTTCTGGAATTGTATTAGAGGTTGGCAGGAAGGTAACGTTCTTTCAGCCAGACGACGAAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000124282.8 ENSMUST00000141664.9 ENSMUST00000231499.2 |
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| CDS CAA 72 bp | CTTTGTGTTTATGTGGCTCAGGGCACAAGCTTTAACTaGAACTCTCACAAAGTTATCCTCTGTGACAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LCVYVAQGTSFN*NSHKVILCDRD Trigger: GTCCCTGTCACAGAGGATAACTTTGTGAGAGTTCAAGTTAAAGCTTGTGCCCTGAGCCACATAAACACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000073466.13 ENSMUST00000114023.3 ENSMUST00000117644.8 ENSMUST00000122254.8 ENSMUST00000124282.8 ENSMUST00000141664.9 |
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