Pregenerated sensors for CRYZ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028199Ensembl transcript IDs: ENSMUST00000029850.15, ENSMUST00000135723.2, ENSMUST00000140644.8, ENSMUST00000144764.8, ENSMUST00000155232.2, ENSMUST00000155385.8, ENSMUST00000184537.8, ENSMUST00000192462.6, ENSMUST00000194876.6, ENSMUST00000195103.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGCAATCTGGCATGTAGCTAATCCAACTCCTCCACTGGCCCCATaGACCAAAACGCTTTCGCCAGCTCGAGCACGGGCACTGTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: LAIWHVANPTPPLAP*TKTLSPARARALWN Trigger: GTTCCACAGTGCCCGTGCTCGAGCTGGCGAAAGCGTTTTGGTTCATGGGGCCAGTGGAGGAGTTGGATTAGCTACATGCCAGATTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
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| 3UTR GCA 90 bp | CCCCGTCTTCCCACTGCCGTGAATGATATCTTCGTGGGCCTGGGCTaGTTTCTCCAATGGATACTCAGAACCTATCACAGGTTTCACCCA | + |
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Preference number: 1 (lower is better) Translates to: PRLPTAVNDIFVGLG*FLQWILRTYHRFHP Trigger: TGGGTGAAACCTGTGATAGGTTCTGAGTATCCATTGGAGAAAGCAGCCCAGGCCCACGAAGATATCATTCACGGCAGTGGGAAGACGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR TCA 90 bp | TGTTTAAAGATGGTGGTGCAGAGACTTGAGGAAGAAGGAGCCCAGTaGCACAGGTCTCATAAGAGGAGAATCATTTTCCCCGTCTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: CLKMVVQRLEEEGAQ*HRSHKRRIIFPVFP Trigger: TGGGAAGACGGGGAAAATGATTCTCCTCTTATGAGACCTGTGTCACTGGGCTCCTTCTTCCTCAAGTCTCTGCACCACCATCTTTAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR TCA 90 bp | ACCCAACCTTTTTCTATTCCTGCTTGGAGAAGGCCTGCGAATTGTTaGAATTCCTCCTTGGTGGAAGAAGAGAGAGAGACCCCAATGATG | + |
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Preference number: 1 (lower is better) Translates to: TQPFSIPAWRRPANC*NSSLVEEERETPMM Trigger: CATCATTGGGGTCTCTCTCTCTTCTTCCACCAAGGAGGAATTTCAACAATTCGCAGGCCTTCTCCAAGCAGGAATAGAAAAAGGTTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR CCA 90 bp | GGCATGCAGTATTCTGATATTCTCAAAAATGTTAGGAAAGCTGACTaGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: GMQYSDILKNVRKAD*EVSQVLLIFAEAFQ Trigger: CTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATTTTTGAGAATATCAGAATACTGCATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR TCA 90 bp | AAGTACGGGATCCCCAGGGCAGCCCCCTGCCTGAAGTTCAGTGTCTCGGGCAGGCTCCAACGGATTCTATaGTCCCAGCCACATCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KYGIPRAAPCLKFSVSGRLQRIL*SQPHQS Trigger: GCTCTGATGTGGCTGGGATCATAGAATCCGTTGGAG...CCTGCCCGAGACACTGAACTTCAGGCAGGGGGCTGCCCTGGGGATCCCGTACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGAAGACCACAGACCCAGGATAAGGCTGCTGACCTCCCAGACTACAGGTAGCGGCCCAAGACAGCCATaGCTGAGGGGGCAGGTGACT | + |
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Preference number: 2 (lower is better) Translates to: TEDHRPRIRLLTSQTTGSGPRQP*LRGQVT Trigger: AGTCACCTGCCCCCTCAGCCATGGCTGTCTTGGGCC...GCTACCTGTAGTCTGGGAGGTCAGCAGCCTTATCCTGGGTCTGTGGTCTTCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAGAGGCCCAAGACAGCCATaGCTGAGGGGGCAGGTGACT | + |
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Preference number: 2 (lower is better) Translates to: KLTGRSPKYCSFLPKLSRGPRQP*LRGQVT Trigger: AGTCACCTGCCCCCTCAGCCATGGCTGTCTTGGGCC...TCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAGAACTACAGGTAGCTGGTaGCCTCCCAGACTACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: KLTGRSPKYCSFLPKLSRTTGSW*PPRLQV Trigger: CACCTGTAGTCTGGGAGGTCACCAGCTACCTGTAGT...TCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR GCA 90 bp | CGGCTGAGGCAGAAAGATCACTGTGAGTTCACGGCCAGCATGAACTACAGAGAACCCATTGGGCACACCTaGTCTCTGCAATTATGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RLRQKDHCEFTASMNYREPIGHT*SLQLCH Trigger: GTGACATAATTGCAGAGAGCAGGTGTGCCCAATGGG...TTCTCTGTAGTTCATGCTGGCCGTGAACTCACAGTGATCTTTCTGCCTCAGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCGCAGAAAGATCACTGTaGGTTCACGGCCAGCATGAA | + |
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Preference number: 2 (lower is better) Translates to: GKLTGRSPKYCSFLPKLSAERSL*VHGQHE Trigger: TTCATGCTGGCCGTGAACTCACAGTGATCTTTCTGC...GGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR GCA 90 bp | ACTGAAGACCACAGACCCAGGATAAGGCTGCTGACCTCCCAGACTACAGGTAGCAGGTCTCCCAAGTATTaGTCATTTTTGCCGAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: TEDHRPRIRLLTSQTTGSRSPKY*SFLPKL Trigger: AAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCT...GCTACCTGTAGTCTGGGAGGTCAGCAGCCTTATCCTGGGTCTGTGGTCTTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAGATCAGACAAGAAGGTCTaGGATGAAGCTGTGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: KLTGRSPKYCSFLPKLSRSDKKV*DEAVCG Trigger: ACCACACACAGCTTCATCTCAGACCTTCTTGTCTGA...TCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CCA 90 bp | AAGACCCTGTCGCCTTTCTTGAAAGCAGACACTTTGTCTCCAACGGATTCTATGAATGTATGTCTCTACTaGGTTGACACCGCAGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: KTLSPFLKADTLSPTDSMNVCLY*VDTAGV Trigger: CACGCCTGCGGTGTCAACCCAGTAGAGACATACATT...CATAGAATCCGTTGGAGACAAAGTGTCTGCTTTCAAGAAAGGCGACAGGGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
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| 3UTR CAA 90 bp | CACCCAACCTTTTTCTATTCCTGCTTGGAGAAGGCCTGCGAATTGTaGAAATTCCTCCTTGGTGGAAGAAGAGAGAGAGACCCCAATGAT | + |
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Preference number: 2 (lower is better) Translates to: HPTFFYSCLEKACEL*KFLLGGRRERDPND Trigger: ATCATTGGGGTCTCTCTCTCTTCTTCCACCAAGGAGGAATTTCAACAATTCGCAGGCCTTCTCCAAGCAGGAATAGAAAAAGGTTGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGGGCACACCTGCTCTCTaGAATTATGTCACTCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: MLGKLTGRSPKYCSFLPKGTPAL*NYVTHC Trigger: ACAGTGAGTGACATAATTGCAGAGAGCAGGTGTGCC...CTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CCA 90 bp | TACAGAATTTACTCCAGGTTAAGATACTATGAAAACCAAAGCAGACAGGTCTTAGGCCCAAGACAGCCATaGCTGAGGGGGCAGGTGACT | + |
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Preference number: 2 (lower is better) Translates to: YRIYSRLRYYENQSRQVLGPRQP*LRGQVT Trigger: AGTCACCTGCCCCCTCAGCCATGGCTGTCTTGGGCC...TAAGACCTGTCTGCTTTGGTTTTCATAGTATCTTAACCTGGAGTAAATTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGACCGGCATGCAGTATTCTGATATTCTCAAAAATGTTAGGAAAGCTGACCCCATTGGGCACACCTaGTCTCTGCAATTATGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LVTGMQYSDILKNVRKADPIGHT*SLQLCH Trigger: GTGACATAATTGCAGAGAGCAGGTGTGCCCAATGGG...GTCAGCTTTCCTAACATTTTTGAGAATATCAGAATACTGCATGCCGGTCACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CCA 90 bp | AAAAATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCTGCCATGGTGTCCCTTaGGTTTATCTCAATGGGACC | + |
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Preference number: 2 (lower is better) Translates to: KNVRKADWEVSQVLLIFACHGVP*VYLNGT Trigger: GGTCCCATTGAGATAAACCCAAGGGACACCATGGCA...GGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR CAA 90 bp | ATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTaGCCGAAGCTTTCCAGAGGCTTACAGACTGAGATGACATTAGTT | + |
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Preference number: 2 (lower is better) Translates to: MLGKLTGRSPKYCSF*PKLSRGLQTEMTLV Trigger: AACTAATGTCATCTCAGTCTGTAAGCCTCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAGAATGAACTACAGAGAATaGTCCTGTCTCAAGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: KLTGRSPKYCSFLPKLSRMNYRE*SCLKHK Trigger: TTTGTGCTTGAGACAGGATCATTCTCTGTAGTTCAT...TCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR GCA 90 bp | ACAAGAAGGTCTGAGATGAAGCTGTGTGTGGTAGTGTGCATCACTACTGATTATGGCACACCTGCTCTCTaGAATTATGTCACTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: TRRSEMKLCVVVCITTDYGTPAL*NYVTHC Trigger: ACAGTGAGTGACATAATTGCAGAGAGCAGGTGTGCC...ATAATCAGTAGTGATGCACACTACCACACACAGCTTCATCTCAGACCTTCTTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CCA 90 bp | AAAATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGGGCTGCTTTCTCCAATaGATACTCAGAACCTATCAC | + |
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Preference number: 2 (lower is better) Translates to: KMLGKLTGRSPKYCSFLPGCFLQ*ILRTYH Trigger: GTGATAGGTTCTGAGTATCCATTGGAGAAAGCAGCC...CGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAGAAGGTCTGAGATGAAGCTGTGTGTGGTAGTGTGCATCACTACTGATTATGATGCTTGTTTCTTTTaGCATGGTGTCCCTTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: TRRSEMKLCVVVCITTDYDACFF*HGVPWV Trigger: AACCCAAGGGACACCATGGCAAAAGAAACAAGCATC...ATAATCAGTAGTGATGCACACTACCACACACAGCTTCATCTCAGACCTTCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR GCA 90 bp | TACAGAATTTACTCCAGGTTAAGATACTATGAAAACCAAAGCAGACAGGTCTTATTCGTGGGCCTGGGCTaGTTTCTCCAATGGATACTC | + |
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Preference number: 2 (lower is better) Translates to: YRIYSRLRYYENQSRQVLFVGLG*FLQWIL Trigger: GAGTATCCATTGGAGAAAGCAGCCCAGGCCCACGAA...TAAGACCTGTCTGCTTTGGTTTTCATAGTATCTTAACCTGGAGTAAATTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGACCGGCATGCAGTATTCTGATATTCTCAAAAATGTTAGGAAAGCTGACTTTTCTATTCCTGCTTaGAGAAGGCCTGCGAATTGT | + |
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Preference number: 2 (lower is better) Translates to: LVTGMQYSDILKNVRKADFSIPA*RRPANC Trigger: ACAATTCGCAGGCCTTCTCCAAGCAGGAATAGAAAA...GTCAGCTTTCCTAACATTTTTGAGAATATCAGAATACTGCATGCCGGTCACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGACCGGCATGCAGTATTCTGATATTCTCAAAAATGTTAGGAAAGCTGACATGAACTACAGAGAATaGTCCTGTCTCAAGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: LVTGMQYSDILKNVRKADMNYRE*SCLKHK Trigger: TTTGTGCTTGAGACAGGATCATTCTCTGTAGTTCAT...GTCAGCTTTCCTAACATTTTTGAGAATATCAGAATACTGCATGCCGGTCACCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR TCA 90 bp | TACAGAATTTACTCCAGGTTAAGATACTATGAAAACCAAAGCAGACAGGTCTTAGCAGAAAGATCACTGTaGGTTCACGGCCAGCATGAA | + |
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Preference number: 2 (lower is better) Translates to: YRIYSRLRYYENQSRQVLAERSL*VHGQHE Trigger: TTCATGCTGGCCGTGAACTCACAGTGATCTTTCTGC...TAAGACCTGTCTGCTTTGGTTTTCATAGTATCTTAACCTGGAGTAAATTCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAAGGTCTGAGATGAAGCTGTGTGTGGTAGTGTGCATCACTACTGATTATTTGTTTCTTTTGCCATaGTGTCCCTTGGGTTTATCT | + |
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Preference number: 2 (lower is better) Translates to: TRRSEMKLCVVVCITTDYLFLLP*CPLGLS Trigger: AGATAAACCCAAGGGACACCATGGCAAAAGAAACAA...ATAATCAGTAGTGATGCACACTACCACACACAGCTTCATCTCAGACCTTCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGAATTTACTCCAGGTTAAGATACTATGAAAACCAAAGCAGACAGGTCTTAAGAGAGAGACCCCAATaGTGCTTGTTTCTTTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: YRIYSRLRYYENQSRQVLRERPQ*CLFLLP Trigger: TGGCAAAAGAAACAAGCATCATTGGGGTCTCTCTCT...TAAGACCTGTCTGCTTTGGTTTTCATAGTATCTTAACCTGGAGTAAATTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGAATTTACTCCAGGTTAAGATACTATGAAAACCAAAGCAGACAGGTCTTAAGTGTGCATCACTACTaGTTATCCCAGCATTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: YRIYSRLRYYENQSRQVLSVHHY*LSQHLD Trigger: GTCTAAATGCTGGGATAATCAGTAGTGATGCACACT...TAAGACCTGTCTGCTTTGGTTTTCATAGTATCTTAACCTGGAGTAAATTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR TCA 72 bp | TGGCATGTAGCTAATCCAACTCCTCCACTGGCCCCATaGACCAAAACGCTTTCGCCAGCTCGAGCACGGGCA | + |
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Preference number: 3 (lower is better) Translates to: WHVANPTPPLAP*TKTLSPARARA Trigger: TGCCCGTGCTCGAGCTGGCGAAAGCGTTTTGGTTCATGGGGCCAGTGGAGGAGTTGGATTAGCTACATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
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| 3UTR CCA 72 bp | GGACCTCGACAGCCAACAACGACGACCCGTCCTCCGTaGGACAGAAGCTTCAGGTCATTGCTAAGGTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: GPRQPTTTTRPP*DRSFRSLLRFS Trigger: TGAGAACCTTAGCAATGACCTGAAGCTTCTGTCCCACGGAGGACGGGTCGTCGTTGTTGGCTGTCGAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCTGCACGCAGACCCCATaGGGCACACCTGCTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: GKLTGRSPKYCSFLPKLSCTQTP*GTPALC Trigger: GCAGAGAGCAGGTGTGCCCAATGGGGTCTGCGTGCA...GGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CAA 90 bp | ATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGTGCACGCAGACCCCATaGGGCACACCTGCTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: MLGKLTGRSPKYCSFLPKCTQTP*GTPALC Trigger: GCAGAGAGCAGGTGTGCCCAATGGGGTCTGCGTGCA...CTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR GCA 72 bp | CCCACTGCCGTGAATGATATCTTCGTGGGCCTGGGCTaGTTTCTCCAATGGATACTCAGAACCTATCACAGG | + |
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Preference number: 3 (lower is better) Translates to: PTAVNDIFVGLG*FLQWILRTYHR Trigger: CCTGTGATAGGTTCTGAGTATCCATTGGAGAAAGCAGCCCAGGCCCACGAAGATATCATTCACGGCAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR CAA 90 bp | GGGCACACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCTGGTGGTGCAGAGACTaGAGGAAGAAGGAGCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: GHTCSLQLCHSLCLLPKVWWCRD*RKKEPS Trigger: ACTGGGCTCCTTCTTCCTCAAGTCTCTGCACCACCA...GACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGTGTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CAA 90 bp | AAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAGATGGTGGTGCAGAGACTaGAGGAAGAAGGAGCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: KLTGRSPKYCSFLPKLSRWWCRD*RKKEPS Trigger: ACTGGGCTCCTTCTTCCTCAAGTCTCTGCACCACCA...TCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CAA 90 bp | AAGAGTTTTGTGATGCACGCAGACCCCATTGGGCACACCTGCTCTCTGCAATTAATCACATCAACCCCCTaGTCCTTGTCACCAACAGAC | + |
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Preference number: 3 (lower is better) Translates to: KSFVMHADPIGHTCSLQLITSTP*SLSPTD Trigger: GTCTGTTGGTGACAAGGACAAGGGGGTTGATGTGAT...TAATTGCAGAGAGCAGGTGTGCCCAATGGGGTCTGCGTGCATCACAAAACTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR GCA 72 bp | AGTTTTGTGATGCACGCAGACCCCATTGGGCACACCTaGTCTCTGCAATTATGTCACTCACTGTGTCTACTC | + |
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Preference number: 3 (lower is better) Translates to: SFVMHADPIGHT*SLQLCHSLCLL Trigger: GAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGTGTGCCCAATGGGGTCTGCGTGCATCACAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| 3UTR-3UTR CAA 90 bp | AAATTCCTCCTTGGTGGAAGAAGAGAGAGAGACCCCAATGATGCTTGTTTCTTTTGGTGGTGCAGAGACTaGAGGAAGAAGGAGCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: KFLLGGRRERDPNDACFFWWCRD*RKKEPS Trigger: ACTGGGCTCCTTCTTCCTCAAGTCTCTGCACCACCA...AAAGAAACAAGCATCATTGGGGTCTCTCTCTCTTCTTCCACCAAGGAGGAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCTTTTTCTATTCCTGCTaGGAGAAGGCCTGCGAATTG | + |
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Preference number: 3 (lower is better) Translates to: GKLTGRSPKYCSFLPKLSFFYSC*EKACEL Trigger: CAATTCGCAGGCCTTCTCCAAGCAGGAATAGAAAAA...GGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAGAAGGTCTGAGATGAAGCTGTGTGTGGTAGTGTGCATCACTACTGATTATTTGCCATGGTGTCCCTaGGGTTTATCTCAATGGGAC | + |
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Preference number: 3 (lower is better) Translates to: TRRSEMKLCVVVCITTDYLPWCP*GLSQWD Trigger: GTCCCATTGAGATAAACCCAAGGGACACCATGGCAA...ATAATCAGTAGTGATGCACACTACCACACACAGCTTCATCTCAGACCTTCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
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| 3UTR TCA 72 bp | CACTGTGAGTTCACGGCCAGCATGAACTACAGAGAATaGTCCTGTCTCAAGCACAAAACAAAAACATCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: HCEFTASMNYRE*SCLKHKTKTSN Trigger: GTTGGATGTTTTTGTTTTGTGCTTGAGACAGGATCATTCTCTGTAGTTCATGCTGGCCGTGAACTCACAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| 3UTR CCA 72 bp | TATTCTGATATTCTCAAAAATGTTAGGAAAGCTGACTaGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: YSDILKNVRKAD*EVSQVLLIFAE Trigger: TTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATTTTTGAGAATATCAGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGACCACAGACCCAGGATAAGGCTGCTGACCTCCCAGACTACAGGTAGCCCCAGGGCAGCCCCCTaGCTGAAGTTCAGTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TEDHRPRIRLLTSQTTGSPRAAP*LKFSVS Trigger: CGAGACACTGAACTTCAGGCAGGGGGCTGCCCTGGG...GCTACCTGTAGTCTGGGAGGTCAGCAGCCTTATCCTGGGTCTGTGGTCTTCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCCTGTTTGAGCTCGGCAGGCCGTaGAGTACGGGATCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCSLQLCHSLCLLPKVLFELGRP*STGSPG Trigger: CCCTGGGGATCCCGTACTTCACGGCCTGCCGAGCTC...AAACAGGACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR TCA 90 bp | AAAATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGGAGCTCGGCAGGCCGTaGAGTACGGGATCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KMLGKLTGRSPKYCSFLPELGRP*STGSPG Trigger: CCCTGGGGATCCCGTACTTCACGGCCTGCCGAGCTC...CGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR TCA 90 bp | ACAAGAAGGTCTGAGATGAAGCTGTGTGTGGTAGTGTGCATCACTACTGATTATGAGCTCGGCAGGCCGTaGAGTACGGGATCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRRSEMKLCVVVCITTDYELGRP*STGSPG Trigger: CCCTGGGGATCCCGTACTTCACGGCCTGCCGAGCTC...ATAATCAGTAGTGATGCACACTACCACACACAGCTTCATCTCAGACCTTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR TCA 90 bp | AGTGTCATCGGCTGCAAGAGCAAATTCCGCGTAGCCACCAGAGACGGTGCTGTAATGATTGTATCCACCTaGTGGCTCTGTGGAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVIGCKSKFRVATRDGAVMIVST*WLCGTG Trigger: GCCTGTTCCACAGAGCCATCAGGTGGATACAATCAT...TACAGCACCGTCTCTGGTGGCTACGCGGAATTTGCTCTTGCAGCCGATGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
||
| CDS-3UTR TCA 90 bp | CACGCAGACCCCATTGGGCACACCTGCTCTCTGCAATTATGTCACTCACTGTGTACTTTGATTAGGACCTaGTGGCTCTGTGGAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HADPIGHTCSLQLCHSLCTLIRT*WLCGTG Trigger: GCCTGTTCCACAGAGCCATCAGGTCCTAATCAAAGT...ACACAGTGAGTGACATAATTGCAGAGAGCAGGTGTGCCCAATGGGGTCTGCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCCTGTTTCCCAGGGCAGCCCCCTaGCTGAAGTTCAGTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TCSLQLCHSLCLLPKVLFPRAAP*LKFSVS Trigger: CGAGACACTGAACTTCAGGCAGGGGGCTGCCCTGGG...AAACAGGACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGCAGACACTTTGTCTCCAACGGATTCTATGATCCCAGCCACATCAGAGAGCTCACTGTGCCCCTaGTCTGGTCAGCCACGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKADTLSPTDSMIPATSESSLCP*SGQPRQ Trigger: TTGCCGTGGCTGACCAGAGCAGGGGCACAGTGAGCT...CTCTGATGTGGCTGGGATCATAGAATCCGTTGGAGACAAAGTGTCTGCTTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGGTGTCCCTTGGGTTTATCTCAATGGGACCTCGACAGCCAACAACGACGGAGCTTCAGCACTTCTaGTCCACCAAACTCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AMVSLGFISMGPRQPTTTELQHF*STKLKH Trigger: GTGTTTGAGTTTGGTGGACCAGAAGTGCTGAAGCTC...CGTCGTTGTTGGCTGTCGAGGTCCCATTGAGATAAACCCAAGGGACACCATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTAGCAGAAGACCCTGTCGCCTTTCTTGAAAGCAGACACTTTGTCTCCAACACTGTGCCCCTGCTCTaGTCAGCCACGGCAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: AVAEDPVAFLESRHFVSNTVPLL*SATAMI Trigger: AATCATTGCCGTGGCTGACCAGAGCAGGGGCACAGT...GTTGGAGACAAAGTGTCTGCTTTCAAGAAAGGCGACAGGGTCTTCTGCTACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
||
| 3UTR CAA 72 bp | ACGACCCGTCCTCCGTGGGACAGAAGCTTCAGGTCATaGCTAAGGTTCTCATTCGCCAGCATCTCAATAATC | + |
|
Preference number: 4 (lower is better) Translates to: TTRPPWDRSFRS*LRFSFASISII Trigger: GATTATTGAGATGCTGGCGAATGAGAACCTTAGCAATGACCTGAAGCTTCTGTCCCACGGAGGACGGGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGTTTTGTGATGCACGCAGACCCCATTGGGCACACCTGCTCTCTGCAATTAACTTTGATTAGGACCTaGTGGCTCTGTGGAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFVMHADPIGHTCSLQLTLIRT*WLCGTG Trigger: GCCTGTTCCACAGAGCCATCAGGTCCTAATCAAAGT...TAATTGCAGAGAGCAGGTGTGCCCAATGGGGTCTGCGTGCATCACAAAACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGACCACAGACCCAGGATAAGGCTGCTGACCTCCCAGACTACAGGTAGCTTTTCTATTCCTGCTTaGAGAAGGCCTGCGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEDHRPRIRLLTSQTTGSFSIPA*RRPANC Trigger: ACAATTCGCAGGCCTTCTCCAAGCAGGAATAGAAAA...GCTACCTGTAGTCTGGGAGGTCAGCAGCCTTATCCTGGGTCTGTGGTCTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCCTGTTTCGCAGGCGTGGACTTTaGTTAGGACCTGATGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCSLQLCHSLCLLPKVLFRRRGL*LGPDGS Trigger: AGAGCCATCAGGTCCTAATCAAAGTCCACGCCTGCG...AAACAGGACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR TCA 90 bp | GAAGACCACAGACCCAGGATAAGGCTGCTGACCTCCCAGACTACAGGTAGCTGGCTAGATGCCTGTCCTTaGTTTTATCAATATAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDHRPRIRLLTSQTTGSWLDACP*FYQYSW Trigger: CCAACTATATTGATAAAATCAAGGACAGGCATCTAG...CCAGCTACCTGTAGTCTGGGAGGTCAGCAGCCTTATCCTGGGTCTGTGGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184537.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGACCCTGTCGCCTTTCTTGAAAGCAGACACTTTGTCTCCAACGGATTCGAGCTTCAGCACTTCTaGTCCACCAAACTCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AEDPVAFLESRHFVSNGFELQHF*STKLKH Trigger: GTGTTTGAGTTTGGTGGACCAGAAGTGCTGAAGCTC...GAATCCGTTGGAGACAAAGTGTCTGCTTTCAAGAAAGGCGACAGGGTCTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
||
| CDS-3UTR CCA 90 bp | CGGCTGAGGCAGAAAGATCACTGTGAGTTCACGGCCAGCATGAACTACAGAGAAGGCTGCTTTCTCCAATaGATACTCAGAACCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLRQKDHCEFTASMNYREGCFLQ*ILRTYH Trigger: GTGATAGGTTCTGAGTATCCATTGGAGAAAGCAGCC...TTCTCTGTAGTTCATGCTGGCCGTGAACTCACAGTGATCTTTCTGCCTCAGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| 3UTR CAA 72 bp | CAGAAGACCCTGTCGCCTTTCTTGAAAGCAGACACTTaGTCTCCAACGGATTCTATGATCCCAGCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: QKTLSPFLKADT*SPTDSMIPATS Trigger: TGATGTGGCTGGGATCATAGAATCCGTTGGAGACAAAGTGTCTGCTTTCAAGAAAGGCGACAGGGTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGACCGGCATGCAGTATTCTGATATTCTCAAAAATGTTAGGAAAGCTGACCGCAGGCGTGGACTTTaGTTAGGACCTGATGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVTGMQYSDILKNVRKADRRRGL*LGPDGS Trigger: AGAGCCATCAGGTCCTAATCAAAGTCCACGCCTGCG...GTCAGCTTTCCTAACATTTTTGAGAATATCAGAATACTGCATGCCGGTCACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCCTGTTTCTCCAACGGATTCTATaGTCCCAGCCACATCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCSLQLCHSLCLLPKVLFLQRIL*SQPHQS Trigger: GCTCTGATGTGGCTGGGATCATAGAATCCGTTGGAG...AAACAGGACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR TCA 90 bp | GGGCACACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCAGAGAGAGACCCCAATaGTGCTTGTTTCTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHTCSLQLCHSLCLLPKVRERPQ*CLFLLP Trigger: TGGCAAAAGAAACAAGCATCATTGGGGTCTCTCTCT...GACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGTGTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR TCA 90 bp | GGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAGAGAGAGACCCCAATaGTGCTTGTTTCTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKLTGRSPKYCSFLPKLSRERPQ*CLFLLP Trigger: TGGCAAAAGAAACAAGCATCATTGGGGTCTCTCTCT...GGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR GCA 90 bp | AATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAATTCGTGGGCCTGGGCTaGTTTCTCCAATGGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: NVRKADWEVSQVLLIFAEFVGLG*FLQWIL Trigger: GAGTATCCATTGGAGAAAGCAGCCCAGGCCCACGAA...TTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | AAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAGAGAGCTTCAGCACTTCTaGTCCACCAAACTCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KLTGRSPKYCSFLPKLSRELQHF*STKLKH Trigger: GTGTTTGAGTTTGGTGGACCAGAAGTGCTGAAGCTC...TCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | CGGCTGAGGCAGAAAGATCACTGTGAGTTCACGGCCAGCATGAACTACAGAGAATTTTCTATTCCTGCTTaGAGAAGGCCTGCGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLRQKDHCEFTASMNYREFSIPA*RRPANC Trigger: ACAATTCGCAGGCCTTCTCCAAGCAGGAATAGAAAA...TTCTCTGTAGTTCATGCTGGCCGTGAACTCACAGTGATCTTTCTGCCTCAGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | ACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCCTGTTTTGCCATGGTGTCCCTTaGGTTTATCTCAATGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TCSLQLCHSLCLLPKVLFCHGVP*VYLNGT Trigger: GGTCCCATTGAGATAAACCCAAGGGACACCATGGCA...AAACAGGACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | AATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAATGCCATGGTGTCCCTTaGGTTTATCTCAATGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: NVRKADWEVSQVLLIFAECHGVP*VYLNGT Trigger: GGTCCCATTGAGATAAACCCAAGGGACACCATGGCA...TTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | CTGGTGACCGGCATGCAGTATTCTGATATTCTCAAAAATGTTAGGAAAGCTGACAATGTATGTCTCTACTaGGTTGACACCGCAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVTGMQYSDILKNVRKADNVCLY*VDTAGV Trigger: CACGCCTGCGGTGTCAACCCAGTAGAGACATACATT...GTCAGCTTTCCTAACATTTTTGAGAATATCAGAATACTGCATGCCGGTCACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| 3UTR CAA 72 bp | AATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATaGCTCATTTTTGCCGAAGCTTTCCAGAGGCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: NVRKADWEVSQV*LIFAEAFQRLT Trigger: TGTAAGCCTCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCCTGTTTGATGCTTGTTTCTTTTaGCATGGTGTCCCTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TCSLQLCHSLCLLPKVLFDACFF*HGVPWV Trigger: AACCCAAGGGACACCATGGCAAAAGAAACAAGCATC...AAACAGGACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR GCA 90 bp | AAAATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGGATGCTTGTTTCTTTTaGCATGGTGTCCCTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KMLGKLTGRSPKYCSFLPDACFF*HGVPWV Trigger: AACCCAAGGGACACCATGGCAAAAGAAACAAGCATC...CGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | ACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCCTGTTTGGCTGCTTTCTCCAATaGATACTCAGAACCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TCSLQLCHSLCLLPKVLFGCFLQ*ILRTYH Trigger: GTGATAGGTTCTGAGTATCCATTGGAGAAAGCAGCC...AAACAGGACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR GCA 90 bp | ACAAGAAGGTCTGAGATGAAGCTGTGTGTGGTAGTGTGCATCACTACTGATTATTGCTTGGAGAAGGCCTaGGAATTGTTGAAATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRRSEMKLCVVVCITTDYCLEKA*ELLKFL Trigger: GAGGAATTTCAACAATTCGCAGGCCTTCTCCAAGCA...ATAATCAGTAGTGATGCACACTACCACACACAGCTTCATCTCAGACCTTCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | ATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGTTGTTTCTTTTGCCATaGTGTCCCTTGGGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: MLGKLTGRSPKYCSFLPKLFLLP*CPLGLS Trigger: AGATAAACCCAAGGGACACCATGGCAAAAGAAACAA...CTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | AATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGTTGAAATTCCTCCTTaGTGGAAGAAGAGAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVRKADWEVSQVLLIFAEVEIPP*WKKRER Trigger: TCTCTCTCTCTTCTTCCACCAAGGAGGAATTTCAAC...TTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | ACAAGAAGGTCTGAGATGAAGCTGTGTGTGGTAGTGTGCATCACTACTGATTATGTTGAAATTCCTCCTTaGTGGAAGAAGAGAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRRSEMKLCVVVCITTDYVEIPP*WKKRER Trigger: TCTCTCTCTCTTCTTCCACCAAGGAGGAATTTCAAC...ATAATCAGTAGTGATGCACACTACCACACACAGCTTCATCTCAGACCTTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCTACTCCCTAAAGTCCTGTTTTTAATACGTGAACCTCAATCAAATAACGAGCTTCAGCACTTCTaGTCCACCAAACTCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLLPKVLFLIREPQSNNELQHF*STKLKH Trigger: GTGTTTGAGTTTGGTGGACCAGAAGTGCTGAAGCTC...GTTATTTGATTGAGGTTCACGTATTAAAAACAGGACTTTAGGGAGTAGACACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
||
| CDS-3UTR CCA 90 bp | AAAAATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCTTGTTTCTTTTGCCATaGTGTCCCTTGGGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: KNVRKADWEVSQVLLIFALFLLP*CPLGLS Trigger: AGATAAACCCAAGGGACACCATGGCAAAAGAAACAA...GGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS TCA 90 bp | AGTAACTGTAGCTCACTGTGCCCCTGCTCTGGTCAGCCACGGCAATaGTTGTATCCACCTGATGGCTCTGTGGAACAGGCACGACCACAT | + |
|
Preference number: 5 (lower is better) Translates to: SNCSSLCPCSGQPRQ*LYPPDGSVEQARPH Trigger: ATGTGGTCGTGCCTGTTCCACAGAGCCATCAGGTGGATACAATCATTGCCGTGGCTGACCAGAGCAGGGGCACAGTGAGCTACAGTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
||
| CDS-3UTR CAA 90 bp | GAAGACCACAGACCCAGGATAAGGCTGCTGACCTCCCAGACTACAGGTAGCTGGATCACATCAACCCCCTaGTCCTTGTCACCAACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EDHRPRIRLLTSQTTGSWITSTP*SLSPTD Trigger: GTCTGTTGGTGACAAGGACAAGGGGGTTGATGTGAT...CCAGCTACCTGTAGTCTGGGAGGTCAGCAGCCTTATCCTGGGTCTGTGGTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
||
| CDS CCA 90 bp | CTGTGGAACAGGCACGACCACATCCGACTGGAGCTTCAGCACTTCTaGTCCACCAAACTCAAACACTCGAATAGCCCTCATCAACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LWNRHDHIRLELQHF*STKLKHSNSPHQLL Trigger: CAGAAGTTGATGAGGGCTATTCGAGTGTTTGAGTTTGGTGGACCAGAAGTGCTGAAGCTCCAGTCGGATGTGGTCGTGCCTGTTCCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000029850.15 ENSMUST00000135723.2 ENSMUST00000140644.8 ENSMUST00000144764.8 ENSMUST00000155232.2 ENSMUST00000155385.8 ENSMUST00000184537.8 ENSMUST00000192462.6 ENSMUST00000194876.6 |
||
| CDS-3UTR CAA 90 bp | CACGCAGACCCCATTGGGCACACCTGCTCTCTGCAATTATGTCACTCACTGTGTATCACATCAACCCCCTaGTCCTTGTCACCAACAGAC | + |
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Preference number: 5 (lower is better) Translates to: HADPIGHTCSLQLCHSLCITSTP*SLSPTD Trigger: GTCTGTTGGTGACAAGGACAAGGGGGTTGATGTGAT...ACACAGTGAGTGACATAATTGCAGAGAGCAGGTGTGCCCAATGGGGTCTGCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | GGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCTCAACCCCCTTGTCCTaGTCACCAACAGACATCTTG | + |
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Preference number: 5 (lower is better) Translates to: GKLTGRSPKYCSFLPKLSSTPLS*SPTDIL Trigger: CAAGATGTCTGTTGGTGACAAGGACAAGGGGGTTGA...GGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | GGGCACACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCACCCTGTCGCCTTTCTaGAAAGCAGACACTTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GHTCSLQLCHSLCLLPKVTLSPF*KADTLS Trigger: AGACAAAGTGTCTGCTTTCAAGAAAGGCGACAGGGT...GACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGTGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | AAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAGAACCCTGTCGCCTTTCTaGAAAGCAGACACTTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: KLTGRSPKYCSFLPKLSRTLSPF*KADTLS Trigger: AGACAAAGTGTCTGCTTTCAAGAAAGGCGACAGGGT...TCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | ATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGTTGCCATGGTGTCCCTaGGGTTTATCTCAATGGGAC | + |
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Preference number: 5 (lower is better) Translates to: MLGKLTGRSPKYCSFLPKLPWCP*GLSQWD Trigger: GTCCCATTGAGATAAACCCAAGGGACACCATGGCAA...CTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | ACACCTGCTCTCTGCAATTATGTCACTCACTGTGTCTACTCCCTAAAGTCCTGTTTGCCATGGTGTCCCTaGGGTTTATCTCAATGGGAC | + |
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Preference number: 5 (lower is better) Translates to: TPALCNYVTHCVYSLKSCLPWCP*GLSQWD Trigger: GTCCCATTGAGATAAACCCAAGGGACACCATGGCAA...ACAGGACTTTAGGGAGTAGACACAGTGAGTGACATAATTGCAGAGAGCAGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | AAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAGCTTTCCAGAAAGGCCTGCGAATTGTaGAAATTCCTCCTTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: KLTGRSPKYCSFLPKLSRKACEL*KFLLGG Trigger: TCCACCAAGGAGGAATTTCAACAATTCGCAGGCCTT...TCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | AATGTTAGGAAAGCTGACTGGGAGGTCTCCCAAGTATTGCTCATTTTTGCCGAAACCCTGTCGCCTTTCTaGAAAGCAGACACTTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: NVRKADWEVSQVLLIFAETLSPF*KADTLS Trigger: AGACAAAGTGTCTGCTTTCAAGAAAGGCGACAGGGT...TTCGGCAAAAATGAGCAATACTTGGGAGACCTCCCAGTCAGCTTTCCTAACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029850.15 ENSMUST00000184537.8 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | ACAAGAAGGTCTGAGATGAAGCTGTGTGTGGTAGTGTGCATCACTACTGATTATTCAACCCCCTTGTCCTaGTCACCAACAGACATCTTG | + |
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Preference number: 5 (lower is better) Translates to: TRRSEMKLCVVVCITTDYSTPLS*SPTDIL Trigger: CAAGATGTCTGTTGGTGACAAGGACAAGGGGGTTGA...ATAATCAGTAGTGATGCACACTACCACACACAGCTTCATCTCAGACCTTCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | ACAAGAAGGTCTGAGATGAAGCTGTGTGTGGTAGTGTGCATCACTACTGATTATTTTTTCTATTCCTGCTaGGAGAAGGCCTGCGAATTG | + |
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Preference number: 5 (lower is better) Translates to: TRRSEMKLCVVVCITTDYFFYSC*EKACEL Trigger: CAATTCGCAGGCCTTCTCCAAGCAGGAATAGAAAAA...ATAATCAGTAGTGATGCACACTACCACACACAGCTTCATCTCAGACCTTCTTGT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
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| CDS-3UTR CAA 90 bp | CTGTGTCTACTCCCTAAAGTCCTGTTTTTAATACGTGAACCTCAATCAAATAACAAGGCCTGCGAATTGTaGAAATTCCTCCTTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: LCLLPKVLFLIREPQSNNKACEL*KFLLGG Trigger: TCCACCAAGGAGGAATTTCAACAATTCGCAGGCCTT...GTTATTTGATTGAGGTTCACGTATTAAAAACAGGACTTTAGGGAGTAGACACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 |
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| CDS TCA 72 bp | CTGCTCTGGTCAGCCACGGCAATGATTGTATCCACCTaGTGGCTCTGTGGAACAGGCACGACCACATCCGAC | + |
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Preference number: 6 (lower is better) Translates to: LLWSATAMIVST*WLCGTGTTTSD Trigger: GTCGGATGTGGTCGTGCCTGTTCCACAGAGCCATCAGGTGGATACAATCATTGCCGTGGCTGACCAGAGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
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| CDS TCA 72 bp | AGCTCACTGTGCCCCTGCTCTGGTCAGCCACGGCAATaGTTGTATCCACCTGATGGCTCTGTGGAACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLCPCSGQPRQ*LYPPDGSVEQA Trigger: TGCCTGTTCCACAGAGCCATCAGGTGGATACAATCATTGCCGTGGCTGACCAGAGCAGGGGCACAGTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135723.2 |
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| CDS CCA 72 bp | AGGCACGACCACATCCGACTGGAGCTTCAGCACTTCTaGTCCACCAAACTCAAACACTCGAATAGCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RHDHIRLELQHF*STKLKHSNSPH Trigger: ATGAGGGCTATTCGAGTGTTTGAGTTTGGTGGACCAGAAGTGCTGAAGCTCCAGTCGGATGTGGTCGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000029850.15 ENSMUST00000135723.2 ENSMUST00000140644.8 ENSMUST00000144764.8 ENSMUST00000155232.2 ENSMUST00000155385.8 ENSMUST00000184537.8 ENSMUST00000192462.6 ENSMUST00000194876.6 |
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| CDS CAA 72 bp | TCATTCGCCAGCATCTCAATAATCACATCAACCCCCTaGTCCTTGTCACCAACAGACATCTTGATTTTATCA | + |
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Preference number: 6 (lower is better) Translates to: SFASISIITSTP*SLSPTDILILS Trigger: TGATAAAATCAAGATGTCTGTTGGTGACAAGGACAAGGGGGTTGATGTGATTATTGAGATGCTGGCGAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029850.15 ENSMUST00000192462.6 ENSMUST00000194876.6 ENSMUST00000195103.2 |
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