Pregenerated sensors for CRYL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021947Ensembl transcript IDs: ENSMUST00000022517.9
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAGGCAGGAGTGCCCACAAGATACTTGGCCTCTATCGCTGCCCATaGGGAAACACAGAGGAGCAGGCCTGGGCCAGCTTCCTGGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LGRSAHKILGLYRCP*GNTEEQAWASFLGF Trigger: GAAGCCCAGGAAGCTGGCCCAGGCCTGCTCCTCTGTGTTTCCCCATGGGCAGCGATAGAGGCCAAGTATCTTGTGGGCACTCCTGCCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR GCA 90 bp | CGTGTAATCACACTGGAAAGAAAAGGTGAGAATCTTCAGCCTGTTTaGCTGGGTGGCAGGGAACCCACACCTCAGAACCTAAGCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: RVITLERKGENLQPV*LGGREPTPQNLSSA Trigger: AGCACTGCTTAGGTTCTGAGGTGTGGGTTCCCTGCCACCCAGGCAAACAGGCTGAAGATTCTCACCTTTTCTTTCCAGTGTGATTACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR CAA 90 bp | GCAGGCCTGGGCCAGCTTCCTGGGCTTCTTGATGCTGCACAGGGATaGGATCAAGAGCTTCTCATCTCCCCAGTAGAGCTGCCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: AGLGQLPGLLDAAQG*DQELLISPVELPRK Trigger: CTTCCTGGGCAGCTCTACTGGGGAGATGAGAAGCTCTTGATCCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGCTGGCCCAGGCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR-3UTR TCA 90 bp | AAGATACTTGGCCTCTATCGCTGCCCATGGGGAAACACAGAGGAGCAGGCCTGGGCTTCCTGGGCTTCTTaGTGCTGCACAGGGATTGGA | + |
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Preference number: 2 (lower is better) Translates to: KILGLYRCPWGNTEEQAWASWAS*CCTGIG Trigger: TCCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGC...CCAGGCCTGCTCCTCTGTGTTTCCCCATGGGCAGCGATAGAGGCCAAGTATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR-3UTR CCA 90 bp | GGTAACAGAGAGCTGCAAATCAGCACCTGGAAATGCACGTGTAATCACACTGGAACAGAGGAGCAGGCCTaGGCCAGCTTCCTGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GNRELQISTWKCTCNHTGTEEQA*ASFLGF Trigger: GAAGCCCAGGAAGCTGGCCCAGGCCTGCTCCTCTGT...TCCAGTGTGATTACACGTGCATTTCCAGGTGCTGATTTGCAGCTCTCTGTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGGGTGGCAGGGAACCCACACCTCAGAACCTAAGCAGTGCTTCGATATCCATGCTGCACAGGGATTaGATCAAGAGCTTCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: CLGGREPTPQNLSSASISMLHRD*IKSFSS Trigger: AGATGAGAAGCTCTTGATCCAATCCCTGTGCAGCAT...GGATATCGAAGCACTGCTTAGGTTCTGAGGTGTGGGTTCCCTGCCACCCAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGCTGCAAATCAGCACCTGGAAATGCACGTGTAATCACACTGGAAAGAAACTCTATCGCTGCCCATaGGGAAACACAGAGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RELQISTWKCTCNHTGKKLYRCP*GNTEEQ Trigger: CTGCTCCTCTGTGTTTCCCCATGGGCAGCGATAGAG...TTTCTTTCCAGTGTGATTACACGTGCATTTCCAGGTGCTGATTTGCAGCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR-3UTR TCA 90 bp | CACCAGCAAACTGAAAGTGATTGCTTTATTATGCAGGGTCACGGGACACTCAGAACTGGAAAGAAAAGGTaGGAATCTTCAGCCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: HQQTESDCFIMQGHGTLRTGKKR*ESSACL Trigger: CAAACAGGCTGAAGATTCTCACCTTTTCTTTCCAGT...TCTGAGTGTCCCGTGACCCTGCATAATAAAGCAATCACTTTCAGTTTGCTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR GCA 72 bp | AGTGCTTCGATATCCCAATGCAGGGTTAGGCAGGAGTaGCCACAAGATACTTGGCCTCTATCGCTGCCCATG | + |
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Preference number: 3 (lower is better) Translates to: SASISQCRVRQE*PQDTWPLSLPM Trigger: CATGGGCAGCGATAGAGGCCAAGTATCTTGTGGGCACTCCTGCCTAACCCTGCATTGGGATATCGAAGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR-3UTR CAA 90 bp | AGCTGCAAATCAGCACCTGGAAATGCACGTGTAATCACACTGGAAAGAAAAGGTAGCTTCCTGGGCTTCTaGATGCTGCACAGGGATTGG | + |
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Preference number: 3 (lower is better) Translates to: SCKSAPGNARVITLERKGSFLGF*MLHRDW Trigger: CCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGCT...ACCTTTTCTTTCCAGTGTGATTACACGTGCATTTCCAGGTGCTGATTTGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| 3UTR-3UTR CAA 90 bp | TTTATTATGCAGGGTCACGGGACACTCAGAGTGGGATTAGAGAATGATTACAAAGAATCTTCAGCCTGTTaGCCTGGGTGGCAGGGAACC | + |
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Preference number: 3 (lower is better) Translates to: FIMQGHGTLRVGLENDYKESSAC*PGWQGT Trigger: GGTTCCCTGCCACCCAGGCAAACAGGCTGAAGATTC...TTTGTAATCATTCTCTAATCCCACTCTGAGTGTCCCGTGACCCTGCATAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR TCA 90 bp | TTGCCTGGGTGGCAGGGAACCCACACCTCAGAACCTAAGCAGTGCTTCGATATCCTCCACCGTGGCCCCTaGGAACTCTGGAACAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LPGWQGTHTSEPKQCFDILHRGP*ELWNRP Trigger: GGGCCTGTTCCAGAGTTCTCAGGGGCCACGGTGGAG...GATATCGAAGCACTGCTTAGGTTCTGAGGTGTGGGTTCCCTGCCACCCAGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR TCA 90 bp | GGCCAGCTTCCTGGGCTTCTTGATGCTGCACAGGGATTGGATCAAGAGCTTCTCTCTCCAAGGGTCCGATaGACGCGTACCGCATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GQLPGLLDAAQGLDQELLSPRVR*TRTACP Trigger: TGGGCATGCGGTACGCGTTCATCGGACCCTTGGAGA...GAGAAGCTCTTGATCCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR GCA 90 bp | GGCCAGCTTCCTGGGCTTCTTGATGCTGCACAGGGATTGGATCAAGAGCTTCTCCAGTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GQLPGLLDAAQGLDQELLQSSLH*LLAAKC Trigger: GCACTTAGCTGCCAGGAGGCAGTGGAGGGACGACTG...GAGAAGCTCTTGATCCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGCTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR TCA 90 bp | TGCCTGGGTGGCAGGGAACCCACACCTCAGAACCTAAGCAGTGCTTCGATATCCCGCTCAAGGAGCCTTTaGGAGAACCAGACTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CLGGREPTPQNLSSASISRSRSL*ENQTAP Trigger: TGGAGCAGTCTGGTTCTCTCAAAGGCTCCTTGAGCG...GGATATCGAAGCACTGCTTAGGTTCTGAGGTGTGGGTTCCCTGCCACCCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR GCA 90 bp | CAGCTTCCTGGGCTTCTTGATGCTGCACAGGGATTGGATCAAGAGCTTCTCATCCACAGCGCCCTCTACTaGTTCGGCCAGGTTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: QLPGLLDAAQGLDQELLIHSALY*FGQVAT Trigger: TGTGGCAACCTGGCCGAAGCAGTAGAGGGCGCTGTG...GATGAGAAGCTCTTGATCCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR GCA 90 bp | GGCCAGCTTCCTGGGCTTCTTGATGCTGCACAGGGATTGGATCAAGAGCTTCTCCTCCTGGCAGCTAAGTaGTCCGGATCATCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: GQLPGLLDAAQGLDQELLLLAAK*SGSSGT Trigger: GGTTCCTGATGATCCGGAGCACTTAGCTGCCAGGAG...GAGAAGCTCTTGATCCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR CCA 90 bp | GGCCAGCTTCCTGGGCTTCTTGATGCTGCACAGGGATTGGATCAAGAGCTTCTCAGCCCGAGAACAGCTTaGAAGGCAGCAGACAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GQLPGLLDAAQGLDQELLSPRTA*KAADKS Trigger: GCTCTTGTCTGCTGCCTTCCAAGCTGTTCTCGGGCT...GAGAAGCTCTTGATCCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR CCA 90 bp | TGCCTGGGTGGCAGGGAACCCACACCTCAGAACCTAAGCAGTGCTTCGATATCCAGGTTCTGTCCATTGTaGCTGGAGCTGTCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: CLGGREPTPQNLSSASISRFCPL*LELSLG Trigger: ACCCAGAGACAGCTCCAGCCACAATGGACAGAACCT...GGATATCGAAGCACTGCTTAGGTTCTGAGGTGTGGGTTCCCTGCCACCCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR GCA 90 bp | GTTTGCCTGGGTGGCAGGGAACCCACACCTCAGAACCTAAGCAGTGCTTCGATACCTTCAGCATTGAGGTaGATAGTCTCCAAGGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: VCLGGREPTPQNLSSASIPSALR*IVSKGP Trigger: CGGACCCTTGGAGACTATGCACCTCAATGCTGAAGG...TATCGAAGCACTGCTTAGGTTCTGAGGTGTGGGTTCCCTGCCACCCAGGCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR GCA 90 bp | GGCCAGCTTCCTGGGCTTCTTGATGCTGCACAGGGATTGGATCAAGAGCTTCTCCAGGATGAGCCACAATaGACTGCTTCACATGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GQLPGLLDAAQGLDQELLQDEPQ*TASHEP Trigger: TGGCTCATGTGAAGCAGTGCATTGTGGCTCATCCTG...GAGAAGCTCTTGATCCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR GCA 90 bp | CAAGATACTTGGCCTCTATCGCTGCCCATGGGGAAACACAGAGGAGCAGGCCTGACTCTCACTGGGGACTaGCCAATCTTCTTCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: QDTWPLSLPMGKHRGAGLTLTGD*PIFFIK Trigger: CTTGATGAAGAAGATTGGGCAGTCCCCAGTGAGAGT...CAGGCCTGCTCCTCTGTGTTTCCCCATGGGCAGCGATAGAGGCCAAGTATCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR GCA 90 bp | TTGCCTGGGTGGCAGGGAACCCACACCTCAGAACCTAAGCAGTGCTTCGATATCTTGAGAGAACCAGACTaGTCCAGGGATTTCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: LPGWQGTHTSEPKQCFDILREPD*SRDFIS Trigger: GGAGATGAAATCCCTGGAGCAGTCTGGTTCTCTCAA...GATATCGAAGCACTGCTTAGGTTCTGAGGTGTGGGTTCCCTGCCACCCAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR CCA 90 bp | AGCTGCAAATCAGCACCTGGAAATGCACGTGTAATCACACTGGAAAGAAAAGGTCCCTCCACTGCCTCCTaGCAGCTAAGTGCTCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: SCKSAPGNARVITLERKGPSTAS*QLSAPD Trigger: ATCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGG...ACCTTTTCTTTCCAGTGTGATTACACGTGCATTTCCAGGTGCTGATTTGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR CCA 90 bp | TTTATTATGCAGGGTCACGGGACACTCAGAGTGGGATTAGAGAATGATTACAAATCTGTCCATTGTGGCTaGAGCTGTCTCTGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: FIMQGHGTLRVGLENDYKSVHCG*SCLWVG Trigger: CCCCACCCAGAGACAGCTCCAGCCACAATGGACAGA...TTTGTAATCATTCTCTAATCCCACTCTGAGTGTCCCGTGACCCTGCATAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR TCA 90 bp | AGCTGCAAATCAGCACCTGGAAATGCACGTGTAATCACACTGGAAAGAAAAGGTCATAGAGTTTCACCTTaGAGCCTCCACTGGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SCKSAPGNARVITLERKGHRVSP*SLHWQT Trigger: TGTTTGCCAGTGGAGGCTTCAAGGTGAAACTCTATG...ACCTTTTCTTTCCAGTGTGATTACACGTGCATTTCCAGGTGCTGATTTGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS GCA 90 bp | TTCGGCCAGGTTGCCACAGCCACTGATGAGAGACAGCTGCCGCTCTaGGCTCAAGGAGCCTTTGAGAGAACCAGACTGCTCCAGGGATTT | + |
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Preference number: 5 (lower is better) Translates to: FGQVATATDERQLPL*AQGAFERTRLLQGF Trigger: AAATCCCTGGAGCAGTCTGGTTCTCTCAAAGGCTCCTTGAGCGCAGAGCGGCAGCTGTCTCTCATCAGTGGCTGTGGCAACCTGGCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR CAA 90 bp | GTTTGCCTGGGTGGCAGGGAACCCACACCTCAGAACCTAAGCAGTGCTTCGATAGCGCTCAAGGAGCCTTaGAGAGAACCAGACTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VCLGGREPTPQNLSSASIALKEP*REPDCS Trigger: GGAGCAGTCTGGTTCTCTCAAAGGCTCCTTGAGCGC...TATCGAAGCACTGCTTAGGTTCTGAGGTGTGGGTTCCCTGCCACCCAGGCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS GCA 90 bp | AGCTTCATGAGGCAGTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTaGTCCGGATCATCAGGAACCTTCATGCACATGTCCTCACTAACT | + |
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Preference number: 5 (lower is better) Translates to: SFMRQSSLHCLLAAK*SGSSGTFMHMSSLT Trigger: AGTTAGTGAGGACATGTGCATGAAGGTTCCTGATGATCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGACTGCCTCATGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS GCA 90 bp | TGGTACTTCAGTATGGAGAGCTTCATGAGGCAGTCGTCCCTCCACTaGCTCCTGGCAGCTAAGTGCTCCGGATCATCAGGAACCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: WYFSMESFMRQSSLH*LLAAKCSGSSGTFM Trigger: CATGAAGGTTCCTGATGATCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGACTGCCTCATGAAGCTCTCCATACTGAAGTACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR CAA 90 bp | TGGGCCAGCTTCCTGGGCTTCTTGATGCTGCACAGGGATTGGATCAAGAGCTTCCATAGGTTCTGTCCATaGTGGCTGGAGCTGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: WASFLGFLMLHRDWIKSFHRFCP*WLELSL Trigger: CAGAGACAGCTCCAGCCACAATGGACAGAACCTATG...GAAGCTCTTGATCCAATCCCTGTGCAGCATCAAGAAGCCCAGGAAGCTGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS CCA 90 bp | CAGGCGGTTCAGGACGAAGCCGTCAATCTCCTTCAGGACTCTCACTaGGGACTGCCCAATCTTCTTCATCAAGGCATAGGTTCTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: QAVQDEAVNLLQDSH*GLPNLLHQGIGSVH Trigger: ATGGACAGAACCTATGCCTTGATGAAGAAGATTGGGCAGTCCCCAGTGAGAGTCCTGAAGGAGATTGACGGCTTCGTCCTGAACCGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR CAA 90 bp | AAGATACTTGGCCTCTATCGCTGCCCATGGGGAAACACAGAGGAGCAGGCCTGGATCACACCTTCAGCATaGAGGTGCATAGTCTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: KILGLYRCPWGNTEEQAWITPSA*RCIVSK Trigger: CTTGGAGACTATGCACCTCAATGCTGAAGGTGTGAT...CCAGGCCTGCTCCTCTGTGTTTCCCCATGGGCAGCGATAGAGGCCAAGTATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS TCA 90 bp | GCAAAGATCTTCTTTTTCAGTTCTAGGTTCTCTGGAACACACTCCTaGATGTGCACAGCGCCCTCTACTGCTTCGGCCAGGTTGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: AKIFFFSSRFSGTHS*MCTAPSTASARLPQ Trigger: CTGTGGCAACCTGGCCGAAGCAGTAGAGGGCGCTGTGCACATTCAGGAGTGTGTTCCAGAGAACCTAGAACTGAAAAAGAAGATCTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS-3UTR CAA 90 bp | GATCAAGAGCTTCTCATCTCCCCAGTAGAGCTGCCCAGGAAGGAGGGGCAGCAGGTCTGTTATCTGCTGTaGCTCAATGTCATAGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: DQELLISPVELPRKEGQQVCYLL*LNVIEF Trigger: AAACTCTATGACATTGAGCAACAGCAGATAACAGAC...CTGCTGCCCCTCCTTCCTGGGCAGCTCTACTGGGGAGATGAGAAGCTCTTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS CCA 90 bp | CTGGAGCTGCTTAGGATAACCCGGTCATCCACAATGCGGTCCAGCTaGGCAAAGATCTTCTTTTTCAGTTCTAGGTTCTCTGGAACACAC | + |
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Preference number: 5 (lower is better) Translates to: LELLRITRSSTMRSS*AKIFFFSSRFSGTH Trigger: GTGTGTTCCAGAGAACCTAGAACTGAAAAAGAAGATCTTTGCCCAGCTGGACCGCATTGTGGATGACCGGGTTATCCTAAGCAGCTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS GCA 72 bp | TCCACCAGTCTCCAGGCCTCACTGATGACGGCGTACTaGAGGCGGTTCAGGACGAAGCCGTCAATCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: STSLQASLMTAY*RRFRTKPSISF Trigger: GAAGGAGATTGACGGCTTCGTCCTGAACCGCCTGCAGTACGCCGTCATCAGTGAGGCCTGGAGACTGGTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS GCA 72 bp | AGGCAGTCGTCCCTCCACTGCCTCCTGGCAGCTAAGTaGTCCGGATCATCAGGAACCTTCATGCACATGTCC | + |
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Preference number: 6 (lower is better) Translates to: RQSSLHCLLAAK*SGSSGTFMHMS Trigger: GGACATGTGCATGAAGGTTCCTGATGATCCGGAGCACTTAGCTGCCAGGAGGCAGTGGAGGGACGACTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS TCA 72 bp | GCACATGTCCTCACTAACTCTCTCCACCGTGGCCCCTaGGAACTCTGGAACAGGCCCGAAAGTACTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: AHVLTNSLHRGP*ELWNRPESTED Trigger: GTCCTCAGTACTTTCGGGCCTGTTCCAGAGTTCTCAGGGGCCACGGTGGAGAGAGTTAGTGAGGACATGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS CAA 90 bp | CAGCCACTGATGAGAGACAGCTGCCGCTCTGCGCTCAAGGAGCCTTaGAGAGAACCAGACTGCTCCAGGGATTTCATCTCCTTCCTGATA | + |
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Preference number: 6 (lower is better) Translates to: QPLMRDSCRSALKEP*REPDCSRDFISFLI Trigger: TATCAGGAAGGAGATGAAATCCCTGGAGCAGTCTGGTTCTCTCAAAGGCTCCTTGAGCGCAGAGCGGCAGCTGTCTCTCATCAGTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS CCA 72 bp | CAGGACGAAGCCGTCAATCTCCTTCAGGACTCTCACTaGGGACTGCCCAATCTTCTTCATCAAGGCATAGGT | + |
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Preference number: 6 (lower is better) Translates to: QDEAVNLLQDSH*GLPNLLHQGIG Trigger: ACCTATGCCTTGATGAAGAAGATTGGGCAGTCCCCAGTGAGAGTCCTGAAGGAGATTGACGGCTTCGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS CCA 72 bp | CTTAGGATAACCCGGTCATCCACAATGCGGTCCAGCTaGGCAAAGATCTTCTTTTTCAGTTCTAGGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LRITRSSTMRSS*AKIFFFSSRFS Trigger: AGAGAACCTAGAACTGAAAAAGAAGATCTTTGCCCAGCTGGACCGCATTGTGGATGACCGGGTTATCCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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| CDS CAA 72 bp | CTTCCTGATATTTTCCAGGGCGTCTGTTATCTGCTGTaGCTCAATGTCATAGAGTTTCACCTTGAAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LPDIFQGVCYLL*LNVIEFHLEAS Trigger: GGAGGCTTCAAGGTGAAACTCTATGACATTGAGCAACAGCAGATAACAGACGCCCTGGAAAATATCAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022517.9 |
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