RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRYGN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038135

Ensembl transcript IDs: ENSMUST00000047119.5

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TACACCTTGATGGCGTTGACACAGCTCTTGGCCCAGCCCCGGCTCTaGAGGAAGGGGCAGTCCTCCACGAACTCTAGGCACTGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: YTLMALTQLLAQPRL*RKGQSSTNSRHWPV
Trigger: CACGGGCCAGTGCCTAGAGTTCGTGGAGGACTGCCCCTTCCTGCAGAGCCGGGGCTGGGCCAAGAGCTGTGTCAACGCCATCAAGGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS GCA 90 bp CCCAGTCGGAGAAGCAGCGGTAGTCTCCTCTCTCCAACACGTACATaGGGCCGCGGTAGTTTGGCTCCTCATAGAGGACCCACGCTCCGT +
Preference number: 5 (lower is better)
Translates to: PSRRSSGSLLSPTRT*GRGSLAPHRGPTLR
Trigger: ACGGAGCGTGGGTCCTCTATGAGGAGCCAAACTACCGCGGCCGCATGTACGTGTTGGAGAGAGGAGACTACCGCTGCTTCTCCGACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS CCA 90 bp CCCCGGCTCTGCAGGAAGGGGCAGTCCTCCACGAACTCTAGGCACTaGCCCGTGAAGTTGCAGCCCTCGAAGATGTCTATGCGGAAATGC +
Preference number: 5 (lower is better)
Translates to: PRLCRKGQSSTNSRH*PVKLQPSKMSMRKC
Trigger: GCATTTCCGCATAGACATCTTCGAGGGCTGCAACTTCACGGGCCAGTGCCTAGAGTTCGTGGAGGACTGCCCCTTCCTGCAGAGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS TCA 90 bp TCTGCAGGAAGGGGCAGTCCTCCACGAACTCTAGGCACTGGCCCGTaGAGTTGCAGCCCTCGAAGATGTCTATGCGGAAATGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SAGRGSPPRTLGTGP*SCSPRRCLCGNALH
Trigger: ATGGAGAGCATTTCCGCATAGACATCTTCGAGGGCTGCAACTTCACGGGCCAGTGCCTAGAGTTCGTGGAGGACTGCCCCTTCCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS TCA 90 bp GGCCATTCCAGCGGAAGAATTCAGGGTAGTCACCATGCTCCAAAATaGACTGCTGGCCGCGGAAGTCAGGGTGATCAAAGCAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: GHSSGRIQGSHHAPK*TAGRGSQGDQSRPR
Trigger: CCTGGGTCTGCTTTGATCACCCTGACTTCCGCGGCCAGCAGTTCATTTTGGAGCATGGTGACTACCCTGAATTCTTCCGCTGGAATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS CAA 72 bp AGGACCCACGCTCCGTCCCCATACACCTTGATGGCGTaGACACAGCTCTTGGCCCAGCCCCGGCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RTHAPSPYTLMA*TQLLAQPRLCR
Trigger: CCTGCAGAGCCGGGGCTGGGCCAAGAGCTGTGTCAACGCCATCAAGGTGTATGGGGACGGAGCGTGGGTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS GCA 72 bp ATGGCGTTGACACAGCTCTTGGCCCAGCCCCGGCTCTaGAGGAAGGGGCAGTCCTCCACGAACTCTAGGCAC +
Preference number: 6 (lower is better)
Translates to: MALTQLLAQPRL*RKGQSSTNSRH
Trigger: GTGCCTAGAGTTCGTGGAGGACTGCCCCTTCCTGCAGAGCCGGGGCTGGGCCAAGAGCTGTGTCAACGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS CCA 72 bp TCTCCATGCATGCCCACAGGCCGACAGGAGCCCATGTaGTCGTTGTGGCCATTCCAGCGGAAGAATTCAGGG +
Preference number: 6 (lower is better)
Translates to: SPCMPTGRQEPM*SLWPFQRKNSG
Trigger: CCCTGAATTCTTCCGCTGGAATGGCCACAACGACCACATGGGCTCCTGTCGGCCTGTGGGCATGCATGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS CCA 72 bp TCCTCTCTCCAACACGTACATGCGGCCGCGGTAGTTTaGCTCCTCATAGAGGACCCACGCTCCGTCCCCATA +
Preference number: 6 (lower is better)
Translates to: SSLQHVHAAAVV*LLIEDPRSVPI
Trigger: TATGGGGACGGAGCGTGGGTCCTCTATGAGGAGCCAAACTACCGCGGCCGCATGTACGTGTTGGAGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS GCA 72 bp GTGAAGTTGCAGCCCTCGAAGATGTCTATGCGGAAATaGTCTCCATGCATGCCCACAGGCCGACAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: VKLQPSKMSMRK*SPCMPTGRQEP
Trigger: GGGCTCCTGTCGGCCTGTGGGCATGCATGGAGAGCATTTCCGCATAGACATCTTCGAGGGCTGCAACTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS GCA 72 bp AGAAGCAGCGGTAGTCTCCTCTCTCCAACACGTACATaGGGCCGCGGTAGTTTGGCTCCTCATAGAGGACCC +
Preference number: 6 (lower is better)
Translates to: RSSGSLLSPTRT*GRGSLAPHRGP
Trigger: GGGTCCTCTATGAGGAGCCAAACTACCGCGGCCGCATGTACGTGTTGGAGAGAGGAGACTACCGCTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS CCA 72 bp TGCAGGAAGGGGCAGTCCTCCACGAACTCTAGGCACTaGCCCGTGAAGTTGCAGCCCTCGAAGATGTCTATG +
Preference number: 6 (lower is better)
Translates to: CRKGQSSTNSRH*PVKLQPSKMSM
Trigger: CATAGACATCTTCGAGGGCTGCAACTTCACGGGCCAGTGCCTAGAGTTCGTGGAGGACTGCCCCTTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS CAA 90 bp GGCTCCGCTCTCCACACGGATGGAATTCACCCGGTTCATAAAGCCTaGGTCCTGGAAGTTGTCACAGTCCCCAAACACCTCCAGCTTCCG +
Preference number: 6 (lower is better)
Translates to: GSALHTDGIHPVHKA*VLEVVTVPKHLQLP
Trigger: CGGAAGCTGGAGGTGTTTGGGGACTGTGACAACTTCCAGGACCAAGGCTTTATGAACCGGGTGAATTCCATCCGTGTGGAGAGCGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS CAA 90 bp AGGAAGGGGCAGTCCTCCACGAACTCTAGGCACTGGCCCGTGAAGTaGCAGCCCTCGAAGATGTCTATGCGGAAATGCTCTCCATGCATG +
Preference number: 6 (lower is better)
Translates to: RKGQSSTNSRHWPVK*QPSKMSMRKCSPCM
Trigger: CATGCATGGAGAGCATTTCCGCATAGACATCTTCGAGGGCTGCAACTTCACGGGCCAGTGCCTAGAGTTCGTGGAGGACTGCCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS TCA 72 bp AGGGGCAGTCCTCCACGAACTCTAGGCACTGGCCCGTaGAGTTGCAGCCCTCGAAGATGTCTATGCGGAAAT +
Preference number: 6 (lower is better)
Translates to: RGSPPRTLGTGP*SCSPRRCLCGN
Trigger: ATTTCCGCATAGACATCTTCGAGGGCTGCAACTTCACGGGCCAGTGCCTAGAGTTCGTGGAGGACTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS GCA 72 bp CCTCGAAGATGTCTATGCGGAAATGCTCTCCATGCATaGCCACAGGCCGACAGGAGCCCATGTGGTCGTTGT +
Preference number: 6 (lower is better)
Translates to: PRRCLCGNALHA*PQADRSPCGRC
Trigger: ACAACGACCACATGGGCTCCTGTCGGCCTGTGGGCATGCATGGAGAGCATTTCCGCATAGACATCTTCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5
CDS CAA 72 bp CAGTCCTCCACGAACTCTAGGCACTGGCCCGTGAAGTaGCAGCCCTCGAAGATGTCTATGCGGAAATGCTCT +
Preference number: 6 (lower is better)
Translates to: QSSTNSRHWPVK*QPSKMSMRKCS
Trigger: AGAGCATTTCCGCATAGACATCTTCGAGGGCTGCAACTTCACGGGCCAGTGCCTAGAGTTCGTGGAGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000047119.5