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Pregenerated sensors for CRYGB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073658

Ensembl transcript IDs: ENSMUST00000027090.9

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp ATCATAAGCTACATACTTTATTTGGCTCTAGAGGAGGAAAGTAGAGTCTCAAAACAGAGTGTTGGGGGATaGGGCAGCAGGAACGAATGG +
Preference number: 4 (lower is better)
Translates to: IISYILYLALEEESRVSKQSVGG*GSRNEW
Trigger: CCATTCGTTCCTGCTGCCTCATCCCCCAACACTCTG...TTTTGAGACTCTACTTTCCTCCTCTAGAGCCAAATAAAGTATGTAGCTTATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
CDS-3UTR TCA 90 bp TCTTGGAGTGCCAGAATCATAAGCTACATACTTTATTTGGCTCTAGAGGAGGAAGGGAGTGGATTTCACTaGAGTGGAAGCGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: SWSARIISYILYLALEEEGSGFH*SGSDPE
Trigger: TTCAGGATCGCTTCCACTTCAGTGAAATCCACTCCC...TTCCTCCTCTAGAGCCAAATAAAGTATGTAGCTTATGATTCTGGCACTCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
CDS-3UTR TCA 90 bp TGGAGTGCCAGAATCATAAGCTACATACTTTATTTGGCTCTAGAGGAGGAAAGTATCGTCTGTGATCTCTaGCATTTGTCCTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: WSARIISYILYLALEEESIVCDL*HLSSEV
Trigger: GACTTCAGAGGACAAATGTCAGAGATCACAGACGAT...ACTTTCCTCCTCTAGAGCCAAATAAAGTATGTAGCTTATGATTCTGGCACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
CDS-3UTR CCA 90 bp TTGGAGTGCCAGAATCATAAGCTACATACTTTATTTGGCTCTAGAGGAGGAAAGATCACATTGAGGGAGTaGATTTCACTGAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LECQNHKLHTLFGSRGGKITLRE*ISLKWK
Trigger: CTTCCACTTCAGTGAAATCCACTCCCTCAATGTGAT...CTTTCCTCCTCTAGAGCCAAATAAAGTATGTAGCTTATGATTCTGGCACTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
CDS-3UTR TCA 90 bp GCCAGAATCATAAGCTACATACTTTATTTGGCTCTAGAGGAGGAAAGTAGAGTCCTGACATTTGTCCTCTaGAGTCATCTTTTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: ARIISYILYLALEEESRVLTFVL*SHLFRR
Trigger: TCTACGAAAAAGATGACTTCAGAGGACAAATGTCAG...GACTCTACTTTCCTCCTCTAGAGCCAAATAAAGTATGTAGCTTATGATTCTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
3UTR CAA 72 bp TCTTGGAGTGCCAGAATCATAAGCTACATACTTTATTaGGCTCTAGAGGAGGAAAGTAGAGTCTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: SWSARIISYILY*ALEEESRVSKC
Trigger: GCATTTTGAGACTCTACTTTCCTCCTCTAGAGCCAAATAAAGTATGTAGCTTATGATTCTGGCACTCCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
CDS-3UTR TCA 90 bp ATCATAAGCTACATACTTTATTTGGCTCTAGAGGAGGAAAGTAGAGTCTCAAAAAGAGACAATCGTCTGTaGTCTCTGACATTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: IISYILYLALEEESRVSKRDNRL*SLTFVL
Trigger: GAGGACAAATGTCAGAGATCACAGACGATTGTCTCT...TTTTGAGACTCTACTTTCCTCCTCTAGAGCCAAATAAAGTATGTAGCTTATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
CDS-3UTR CAA 90 bp ATCATAAGCTACATACTTTATTTGGCTCTAGAGGAGGAAAGTAGAGTCTCAAAAGTAAGTGCCAGAGTGTaGGGGGATGAGGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: IISYILYLALEEESRVSKVSARV*GDEAAG
Trigger: TCCTGCTGCCTCATCCCCCAACACTCTGGCACTTAC...TTTTGAGACTCTACTTTCCTCCTCTAGAGCCAAATAAAGTATGTAGCTTATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
CDS-3UTR CAA 90 bp AGTGCCAGAATCATAAGCTACATACTTTATTTGGCTCTAGAGGAGGAAAGTAGACAGCCCTCCATCACATaGAGGGAGTGGATTTCACTG +
Preference number: 5 (lower is better)
Translates to: SARIISYILYLALEEESRQPSIT*REWISL
Trigger: CAGTGAAATCCACTCCCTCAATGTGATGGAGGGCTG...TCTACTTTCCTCCTCTAGAGCCAAATAAAGTATGTAGCTTATGATTCTGGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
CDS TCA 90 bp GAAGTGGAAGCGATCCTGAAGAGAGAGACAATCGTCTGTGATCTCTaGCATTTGTCCTCTGAAGTCATCTTTTTCGTAGATCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: EVEAILKRETIVCDL*HLSSEVIFFVDPHS
Trigger: AGAATGAGGATCTACGAAAAAGATGACTTCAGAGGACAAATGTCAGAGATCACAGACGATTGTCTCTCTCTTCAGGATCGCTTCCACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9
CDS TCA 72 bp GCGATCCTGAAGAGAGAGACAATCGTCTGTGATCTCTaGCATTTGTCCTCTGAAGTCATCTTTTTCGTAGAT +
Preference number: 6 (lower is better)
Translates to: AILKRETIVCDL*HLSSEVIFFVD
Trigger: ATCTACGAAAAAGATGACTTCAGAGGACAAATGTCAGAGATCACAGACGATTGTCTCTCTCTTCAGGATCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027090.9