RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRYBG3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022723

Ensembl transcript IDs: ENSMUST00000044604.16, ENSMUST00000172910.3, ENSMUST00000232544.2

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGCCTGTAGGAGTTTGTTTTCCTGTGCCTGGTTCACACAGGCGTaGAGCAGGACACTCACTAATGCTTGTAACCGCACTGTCCAGACA +
Preference number: 1 (lower is better)
Translates to: TACRSLFSCAWFTQA*SRTLTNACNRTVQT
Trigger: TGTCTGGACAGTGCGGTTACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAAACAAACTCCTACAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CCA 90 bp TCCTGCAGGAGCATGACAGCCTGTAGGAGTTTGTTTTCCTGTGCCTaGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAAC +
Preference number: 1 (lower is better)
Translates to: SCRSMTACRSLFSCA*FTQAWSRTLTNACN
Trigger: GTTACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAAACAAACTCCTACAGGCTGTCATGCTCCTGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR TCA 90 bp GTGCCAGGTATGATGCTGTGTGCCTTCATCCCAGACAGGTTTCTATaGATTCAAGGCCAGCCTGCTCTACATAGACAGTTCAGAGCCTGC +
Preference number: 1 (lower is better)
Translates to: VPGMMLCAFIPDRFL*IQGQPALHRQFRAC
Trigger: GCAGGCTCTGAACTGTCTATGTAGAGCAGGCTGGCCTTGAATTCATAGAAACCTGTCTGGGATGAAGGCACACAGCATCATACCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR TCA 90 bp AGTCTTCAGGTGGTGCTAAAAATGACTCATCTTCCTGCAGGAGCATaGCAGCCTGTAGGAGTTTGTTTTCCTGTGCCTGGTTCACACAGG +
Preference number: 1 (lower is better)
Translates to: SLQVVLKMTHLPAGA*QPVGVCFPVPGSHR
Trigger: CCTGTGTGAACCAGGCACAGGAAAACAAACTCCTACAGGCTGTCATGCTCCTGCAGGAAGATGAGTCATTTTTAGCACCACCTGAAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR GCA 90 bp CACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTaGAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGG +
Preference number: 1 (lower is better)
Translates to: HGQRLGKDRFQEIGH*NWTHRKKEHIFFTR
Trigger: CCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CCA 90 bp CAGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTaGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTT +
Preference number: 1 (lower is better)
Translates to: QSSRSALRKRQVSGN*PLQLDPSEERTHFL
Trigger: AAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CCA 90 bp GGTCTTCGCTTTCCTTTATCACATGTGGATGCTCTGAAGCAAATCTaGTGCGGGTCACCAATTCGTGTTAAGGACCTGAAACTTGACACA +
Preference number: 1 (lower is better)
Translates to: GLRFPLSHVDALKQI*CGSPIRVKDLKLDT
Trigger: TGTGTCAAGTTTCAGGTCCTTAACACGAATTGGTGACCCGCACCAGATTTGCTTCAGAGCATCCACATGTGATAAAGGAAAGCGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR TCA 90 bp ATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTGTGTTCCAGCTaGAAAATGTCTTTCCTAGAGTTTGGGTTGTGGCTGGGACAATTA +
Preference number: 1 (lower is better)
Translates to: MHMIGEEEESEVCSS*KMSFLEFGLWLGQL
Trigger: TAATTGTCCCAGCCACAACCCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCTTCTCCTATCATGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR GCA 90 bp CTTCGCTTTCCTTTATCACATGTGGATGCTCTGAAGCAAATCTGGTaGGGGTCACCAATTCGTGTTAAGGACCTGAAACTTGACACAGAT +
Preference number: 1 (lower is better)
Translates to: LRFPLSHVDALKQIW*GSPIRVKDLKLDTD
Trigger: ATCTGTGTCAAGTTTCAGGTCCTTAACACGAATTGGTGACCCGCACCAGATTTGCTTCAGAGCATCCACATGTGATAAAGGAAAGCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR CCA 90 bp TATTCCTCCTTAAGTCGGGTAAAATGTAAGGTTAATACTCAACACTaGGTGCTGGGTGGGCACTCCAAGGATGTTCATACATCTGTAGTT +
Preference number: 1 (lower is better)
Translates to: YSSLSRVKCKVNTQH*VLGGHSKDVHTSVV
Trigger: AACTACAGATGTATGAACATCCTTGGAGTGCCCACCCAGCACCCAGTGTTGAGTATTAACCTTACATTTTACCCGACTTAAGGAGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR TCA 90 bp TCATTTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATaGTGCTGTGTGCCTTCATCCCAGACAGGTTTCTATGAATTCAAG +
Preference number: 1 (lower is better)
Translates to: SFEDQGFKDFHWCQV*CCVPSSQTGFYEFK
Trigger: CTTGAATTCATAGAAACCTGTCTGGGATGAAGGCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR TCA 90 bp TTTATGTGGGGAATTGATGACTTTTGTGAGTTATCTAGTTACAGCTaGAGTAGTTTCTCTGAAACAAGTTTCCTACTTCTGACGGATATT +
Preference number: 1 (lower is better)
Translates to: FMWGIDDFCELSSYS*SSFSETSFLLLTDI
Trigger: AATATCCGTCAGAAGTAGGAAACTTGTTTCAGAGAAACTACTTCAGCTGTAACTAGATAACTCACAAAAGTCATCAATTCCCCACATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR-3UTR GCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGGCGGCCTCCTTCTCATaGACACAGCACGTGAGTGGG +
Preference number: 2 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVAASFS*TQHVSG
Trigger: CCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGC...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR-3UTR CCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCCAGGTTTCAGGAAATTaGCCACTGCAACTGGACCCA +
Preference number: 2 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAQVSGN*PLQLDP
Trigger: TGGGTCCAGTTGCAGTGGCCAATTTCCTGAAACCTG...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CAA 90 bp AAAAATGACTCATCTTCCTGCAGGAGCATGACAGCCTGTAGGAGTTaGTTTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTC +
Preference number: 2 (lower is better)
Translates to: KNDSSSCRSMTACRS*FSCAWFTQAWSRTL
Trigger: GAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAAACAAACTCCTACAGGCTGTCATGCTCCTGCAGGAAGATGAGTCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR-3UTR GCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAGCGGCCTCCTTCTCATaGACACAGCACGTGAGTGGG +
Preference number: 2 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTAASFS*TQHVSG
Trigger: CCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGC...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR-3UTR TCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACATGCACACAGCACGTaGGTGGGTGGAGGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTHAHST*VGGGAF
Trigger: AAAGGCACCTCCACCCACTCACGTGCTGTGTGCATG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR-3UTR CCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTCAGCACGTGAGTGGGTaGAGGTGCCTTTGTGATTCT +
Preference number: 2 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGQHVSG*RCLCDS
Trigger: AGAATCACAAAGGCACCTCCACCCACTCACGTGCTG...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR-3UTR TCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAACATGCACACAGCACGTaGGTGGGTGGAGGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKHAHST*VGGGAF
Trigger: AAAGGCACCTCCACCCACTCACGTGCTGTGTGCATG...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR-3UTR GCA 90 bp AGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGAGAGCTCTCAGACGCTaGTTGGAAGATGACAGAAGA +
Preference number: 2 (lower is better)
Translates to: RGGIRGVFQLKNVFPRVWRALRR*LEDDRR
Trigger: TCTTCTGTCATCTTCCAAGCAGCGTCTGAGAGCTCT...CCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR-3UTR TCA 90 bp GCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCTTCATCCCAGAGTAGTGGTGGCTCTTTaGGTCTTAAGTATCCACTGT +
Preference number: 2 (lower is better)
Translates to: ALKIFIGARYDAVCLHPRVVVAL*VLSIHC
Trigger: ACAGTGGATACTTAAGACTCAAAGAGCCACCACTAC...TCTGGGATGAAGGCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR-3UTR GCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAAATGACTCATCTTCCTaGAGGAGCATGACAGCCTGT +
Preference number: 2 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKNDSSS*RSMTAC
Trigger: ACAGGCTGTCATGCTCCTGCAGGAAGATGAGTCATT...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CAA 90 bp CGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTCTAAACCTGGTTTaGCTTAGCTGTAATTGTTTAAAATGGGAGGAAAACTTGGTTGTC +
Preference number: 2 (lower is better)
Translates to: RVQVLCVLVVPLNLV*LSCNCLKWEENLVV
Trigger: GACAACCAAGTTTTCCTCCCATTTTAAACAATTACAGCTAAGCAAAACCAGGTTTAGAGGCACTACCAGTACACACAGTACCTGCACACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR-3UTR CCA 90 bp AGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGCTCAAAGTCGGTTGTTaGAGTCTGAGCTTTTTATGT +
Preference number: 2 (lower is better)
Translates to: RGGIRGVFQLKNVFPRVWLKVGC*SLSFLC
Trigger: ACATAAAAAGCTCAGACTCCAACAACCGACTTTGAG...CCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR CAA 90 bp AAAATGTCTTTCCTAGAGTTTGGGTTGTGGCTGGGACAATTACTTTaGACTGAAAGGTCATGTGTCTTTACAGAAGCATTGTGGACCTGC +
Preference number: 2 (lower is better)
Translates to: KMSFLEFGLWLGQLL*TERSCVFTEALWTC
Trigger: GCAGGTCCACAATGCTTCTGTAAAGACACATGACCTTTCAGTCAAAAGTAATTGTCCCAGCCACAACCCAAACTCTAGGAAAGACATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR-3UTR GCA 90 bp TCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTACTCTAGTGCCTTTATaGAGAGAATTGTTGATTTTC +
Preference number: 2 (lower is better)
Translates to: SEECEADAHDRRRGGIRGTLVPL*RELLIF
Trigger: GAAAATCAACAATTCTCTGCATAAAGGCACTAGAGT...ACCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR-3UTR CCA 90 bp TTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTATTCAATGGAGAAAGTTCTTTCTaGGTGCGGTGCGGTGCAGTA +
Preference number: 2 (lower is better)
Translates to: LLGIPDSDKTILRTSLFNGESSF*VRCGAV
Trigger: TACTGCACCGCACCGCACCCAGAAAGAACTTTCTCC...ATTGAATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR CAA 90 bp ACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTaGGAAGAAATAACTCCTTTAAAGAGCATCACTGGCTCCGAAAAT +
Preference number: 2 (lower is better)
Translates to: TCHKDYVSNLARLAS*EEITPLKSITGSEN
Trigger: ATTTTCGGAGCCAGTGATGCTCTTTAAAGGAGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGACATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR-3UTR GCA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAAAGGCCATACATTCTaGAGCAACTTAACTACTCAA +
Preference number: 2 (lower is better)
Translates to: KGGLHLSFSEECEADAHDKGHTF*SNLTTQ
Trigger: TTGAGTAGTTAAGTTGCTGCAGAATGTATGGCCTTT...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR-3UTR CCA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATTCTGAGCTTTTTATGTaGGGAATTGATGACTTTTGT +
Preference number: 2 (lower is better)
Translates to: KGGLHLSFSEECEADAHDSELFM*GIDDFC
Trigger: ACAAAAGTCATCAATTCCCCACATAAAAAGCTCAGA...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR GCA 72 bp CCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTaGAGTAGTGTGAACACAGCGGCCTCCTTCTCATGC +
Preference number: 3 (lower is better)
Translates to: PLGRKFFLGAVR*SSVNTAASFSC
Trigger: GCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR GCA 72 bp CGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATaGACACAGCACGTGAGTGGGTGGAGGTGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: RCSSVNTAASFS*TQHVSGWRCLC
Trigger: ACAAAGGCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR TCA 72 bp GAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTaGACACAGCGGCCTCCTTCTCATGCACACAGCACG +
Preference number: 3 (lower is better)
Translates to: ESSFWVRCGAVV*TQRPPSHAHST
Trigger: CGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACCCAGAAAGAACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR GCA 72 bp GCCACACCCATAAGAGGTACCCAGCATCTGTGCCCGTaGAGAGCTCTCAGACGCTGCTTGGAAGATGACAGA +
Preference number: 3 (lower is better)
Translates to: ATPIRGTQHLCP*RALRRCLEDDR
Trigger: TCTGTCATCTTCCAAGCAGCGTCTGAGAGCTCTGCACGGGCACAGATGCTGGGTACCTCTTATGGGTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR GCA 72 bp CAAGGCCAGCCTGCTCTACATAGACAGTTCAGAGCCTaGTTTCTCCCTCACACTCCCCCACAAGATTTTCCT +
Preference number: 3 (lower is better)
Translates to: QGQPALHRQFRA*FLPHTPPQDFP
Trigger: AGGAAAATCTTGTGGGGGAGTGTGAGGGAGAAAGCAGGCTCTGAACTGTCTATGTAGAGCAGGCTGGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR-3UTR CAA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAACAGGTTTCAGGAAATaGGCCACTGCAACTGGACCC +
Preference number: 3 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVTGFRK*ATATGP
Trigger: GGGTCCAGTTGCAGTGGCCAATTTCCTGAAACCTGT...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CCA 72 bp AGGAGTTTGTTTTCCTGTGCCTGGTTCACACAGGCGTaGAGCAGGACACTCACTAATGCTTGTAACCGCACT +
Preference number: 3 (lower is better)
Translates to: RSLFSCAWFTQA*SRTLTNACNRT
Trigger: AGTGCGGTTACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAAACAAACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CCA 72 bp CGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTaGCCACTGCAACTGGACCCATCGGAAGAAAGAACA +
Preference number: 3 (lower is better)
Translates to: RSALRKRQVSGN*PLQLDPSEERT
Trigger: TGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR TCA 72 bp GTGGTGCTAAAAATGACTCATCTTCCTGCAGGAGCATaGCAGCCTGTAGGAGTTTGTTTTCCTGTGCCTGGT +
Preference number: 3 (lower is better)
Translates to: VVLKMTHLPAGA*QPVGVCFPVPG
Trigger: ACCAGGCACAGGAAAACAAACTCCTACAGGCTGTCATGCTCCTGCAGGAAGATGAGTCATTTTTAGCACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR TCA 72 bp ATAGGAGAAGAGGAGGAATCCGAGGTGTGTTCCAGCTaGAAAATGTCTTTCCTAGAGTTTGGGTTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: IGEEEESEVCSS*KMSFLEFGLWL
Trigger: CAGCCACAACCCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCTTCTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR GCA 72 bp GATTTTCGGTCTTCGCTTTCCTTTATCACATGTGGATaGTCTGAAGCAAATCTGGTGCGGGTCACCAATTCG +
Preference number: 3 (lower is better)
Translates to: DFRSSLSFITCG*SEANLVRVTNS
Trigger: CGAATTGGTGACCCGCACCAGATTTGCTTCAGAGCATCCACATGTGATAAAGGAAAGCGAAGACCGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR TCA 72 bp AAATCTGGTGCGGGTCACCAATTCGTGTTAAGGACCTaGAACTTGACACAGATGAAGAAAAGGAGAACCTGG +
Preference number: 3 (lower is better)
Translates to: KSGAGHQFVLRT*NLTQMKKRRTW
Trigger: CCAGGTTCTCCTTTTCTTCATCTGTGTCAAGTTTCAGGTCCTTAACACGAATTGGTGACCCGCACCAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR GCA 72 bp CGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTaGAACTGGACCCATCGGAAGAAAGAACACATTTTC +
Preference number: 3 (lower is better)
Translates to: RLGKDRFQEIGH*NWTHRKKEHIF
Trigger: GAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR GCA 72 bp AAGTCTTCAGGTGGTGCTAAAAATGACTCATCTTCCTaGAGGAGCATGACAGCCTGTAGGAGTTTGTTTTCC +
Preference number: 3 (lower is better)
Translates to: KSSGGAKNDSSS*RSMTACRSLFS
Trigger: GGAAAACAAACTCCTACAGGCTGTCATGCTCCTGCAGGAAGATGAGTCATTTTTAGCACCACCTGAAGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR GCA 72 bp CCTTTATCACATGTGGATGCTCTGAAGCAAATCTGGTaGGGGTCACCAATTCGTGTTAAGGACCTGAAACTT +
Preference number: 3 (lower is better)
Translates to: PLSHVDALKQIW*GSPIRVKDLKL
Trigger: AAGTTTCAGGTCCTTAACACGAATTGGTGACCCGCACCAGATTTGCTTCAGAGCATCCACATGTGATAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR CCA 72 bp AGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTaGACACGAGAGGAAAACCAGGAAATTATTAGGCAT +
Preference number: 3 (lower is better)
Translates to: RGARRRSWFMSL*TREENQEIIRH
Trigger: ATGCCTAATAATTTCCTGGTTTTCCTCTCGTGTCCACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR-3UTR CAA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATACAGGTTTCAGGAAATaGGCCACTGCAACTGGACCC +
Preference number: 3 (lower is better)
Translates to: KGGLHLSFSEECEADAHDTGFRK*ATATGP
Trigger: GGGTCCAGTTGCAGTGGCCAATTTCCTGAAACCTGT...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR TCA 72 bp GACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATaGTGCTGTGTGCCTTCATCCCAGACAGGTTTCTAT +
Preference number: 3 (lower is better)
Translates to: DQGFKDFHWCQV*CCVPSSQTGFY
Trigger: ATAGAAACCTGTCTGGGATGAAGGCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR CCA 72 bp GGAAAAGACAGGTTTCAGGAAATTGGCCACTGCAACTaGACCCATCGGAAGAAAGAACACATTTTCTTCACA +
Preference number: 3 (lower is better)
Translates to: GKDRFQEIGHCN*THRKKEHIFFT
Trigger: TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTCCTGAAACCTGTCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR-3UTR CAA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCACTCAAAGTCGGTTGTaGGAGTCTGAGCTTTTTATG +
Preference number: 3 (lower is better)
Translates to: LRTKALKIFIGARYDAVCTQSRL*ESELFM
Trigger: CATAAAAAGCTCAGACTCCAACAACCGACTTTGAGT...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR TCA 72 bp AGAGTTTGGGTTGTGGCTGGGACAATTACTTTTGACTaGAAGGTCATGTGTCTTTACAGAAGCATTGTGGAC +
Preference number: 3 (lower is better)
Translates to: RVWVVAGTITFD*KVMCLYRSIVD
Trigger: GTCCACAATGCTTCTGTAAAGACACATGACCTTTCAGTCAAAAGTAATTGTCCCAGCCACAACCCAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR-3UTR CAA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCCTCTAAACCTGGTTTaGCTTAGCTGTAATTGTTTA +
Preference number: 3 (lower is better)
Translates to: LRTKALKIFIGARYDAVCPLNLV*LSCNCL
Trigger: TAAACAATTACAGCTAAGCAAAACCAGGTTTAGAGG...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR CCA 72 bp ACTCAAAGTCGGTTGTTGGAGTCTGAGCTTTTTATGTaGGGAATTGATGACTTTTGTGAGTTATCTAGTTAC +
Preference number: 3 (lower is better)
Translates to: TQSRLLESELFM*GIDDFCELSSY
Trigger: GTAACTAGATAACTCACAAAAGTCATCAATTCCCCACATAAAAAGCTCAGACTCCAACAACCGACTTTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGTACCTGAGTCCTCGCTaGGTGGCTGGCAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQYLSPR*VAGSLL
Trigger: GAGGAGGCTGCCAGCCACCCAGCGAGGACTCAGGTA...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGGGCAGCCGCAGGAAGTaGGGTCAACGTAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVGSRRK*GQRRGP
Trigger: AGGGCCTCTACGTTGACCTCACTTCCTGCGGCTGCC...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCGACCACCGGCCATGCTaGAGACTGGAGGTCGTTGGT +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCDHRPC*RLEVVG
Trigger: ACCAACGACCTCCAGTCTGCAGCATGGCCGGTGGTC...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCCCCGTCTCTGAGGAGTaGGTCCTGGAAGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCPVSEE*VLEVCK
Trigger: CTTGCAGACTTCCAGGACTCACTCCTCAGAGACGGG...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCTCTGGTCCCCGTCTCTaGGGAGTGAGTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCSGPRL*GVSPGS
Trigger: ACTTCCAGGACTCACTCCTCAGAGACGGGGACCAGA...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGTGTCGCTTCAGCCTCTaGAGCACTCCCCACACCATC +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQCRFSL*STPHTI
Trigger: GATGGTGTGGGGAGTGCTTCAGAGGCTGAAGCGACA...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGCAGGCGAGACCTCACTaGACAGAACATCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQQARPH*TEHPPA
Trigger: CGCAGGAGGATGTTCTGTCCAGTGAGGTCTCGCCTG...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCGCCGGCTGTTCAGCATaGTTCCTTCTGTCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCAGCSA*FLLSSA
Trigger: AGCGGAGGACAGAAGGAACCATGCTGAACAGCCGGC...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGGCCCCAGGGAGTCTGTaGGTCCTTCTCAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQAPGSL*VLLRFL
Trigger: GAGAAACCTGAGAAGGACCCACAGACTCCCTGGGGC...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGGGTACCGGAAAGACATaGTGGGTCCACTTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQGTGKT*WVHLRP
Trigger: GGGCCTTAAGTGGACCCATCATGTCTTTCCGGTACC...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCGACATCTGGTATTGCTaGGGCTGGGTAGCCCTCATA +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCDIWYC*GWVALI
Trigger: TATGAGGGCTACCCAGCCTCAGCAATACCAGATGTC...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCGTTTGCACTCTCCCTTaGCTTGGAAGAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCVCTLP*LGRAMV
Trigger: CACCATGGCTCTTCCAAGTCAAGGGAGAGTGCAAAC...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGTCTCTGGGTTCTGCCTaGGAAACAGAGGGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVSLGSA*ETEGVD
Trigger: GTCCACACCCTCTGTTTCTCAGGCAGAACCCAGAGA...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCAGAAGGCACAGTCAGTaGGCTGGAGCCCTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSARRHSQ*AGALRC
Trigger: GCACCTGAGGGCTCCAGCTCACTGACTGTGCCTTCT...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGCACGGTTCTCAGTGCTaGCACTGGAATCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVHGSQC*HWNPLE
Trigger: CTCCAGAGGATTCCAGTGGCAGCACTGAGAACCGTG...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGGGACCAGGTCAGTTCTaGTCTCAGACCTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVGPGQF*SQTFRR
Trigger: CCTGCGAAAGGTCTGAGAGCAGAACTGACCTGGTCC...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGCTCATTCTCCACTTCTaGCTGAGCTGCCCGTGTTCA +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQLILHF*LSCPCS
Trigger: TGAACACGGGCAGCTCAGGCAGAAGTGGAGAATGAG...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAAACCGAGAGAAGCTGTaGCAGGGGGCGCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVNREKL*QGALPL
Trigger: GAGGGGCAGCGCCCCCTGGCACAGCTTCTCTCGGTT...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGCCCCAGCTAACTGAGTaGCAGCAGTTTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVPQLTE*QQFQDL
Trigger: CAGGTCCTGAAACTGCTGGCACTCAGTTAGCTGGGG...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCATCCGGAAGGTCCTTTaGCTTTGGGAGATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCIRKVL*LWEIVH
Trigger: GTGGACGATCTCCCAAAGCCAAAGGACCTTCCGGAT...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGGCACAGTCAGTGAGCTaGAGCCCTCAGGTGCAAACA +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVAQSVS*SPQVQT
Trigger: TGTTTGCACCTGAGGGCTCCAGCTCACTGACTGTGC...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCTGTTGCGTATGTCACTaGAGGCTTCTCTGGCTTACC +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCCCVCH*RLLWLT
Trigger: GGTAAGCCAGAGAAGCCTTCAGTGACATACGCAACA...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTCTGACCACCGGCCATaGTGCAGACTGGAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSASDHRP*CRLEVV
Trigger: AACGACCTCCAGTCTGCAGCATGGCCGGTGGTCAGA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGCACTGTAGGGAGAGATaGAGACAGACATTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQHCRER*RQTLSV
Trigger: CACGGACAATGTCTGTCTGCATCTCTCCCTACAGTG...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGGATGAAGCAATATCCTaGAGTCCTGGGACGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQDEAIS*SPGTLS
Trigger: GGAAAGCGTCCCAGGACTGCAGGATATTGCTTCATC...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGGTCAAGGTGAAGAGGTaGCTCAGCATCAGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVVKVKR*LSIRGN
Trigger: GTTGCCTCTGATGCTGAGGCACCTCTTCACCTTGAC...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGTTACCACATCTAGCTTaGCAGGCATCCCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQLPHLA*QASPQR
Trigger: TCTCTGAGGGGATGCCTGCCAAGCTAGATGTGGTAA...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCTCTCAGTGCTGCCACTaGAATCCTCTGGAGCCATTA +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCSQCCH*NPLEPL
Trigger: TAATGGCTCCAGAGGATTCCAGTGGCAGCACTGAGA...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCTGTCATCCTCATAGATaGGGCTCAGGGCTAAGGGAT +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCCHPHR*GSGLRD
Trigger: ATCCCTTAGCCCTGAGCCCCATCTATGAGGATGACA...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCACCCAGGGTCAGTCTTaGGGCACAGCTCTATCACCG +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSATQGQS*GTALSP
Trigger: CGGTGATAGAGCTGTGCCCCAAGACTGACCCTGGGT...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTATCCACAAGGCCACCTTaGCTCCAGGAGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVSTRPP*LQECPG
Trigger: GCCGGGACACTCCTGGAGCCAAGGTGGCCTTGTGGA...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCCGCTCTCTCCTGTTTTaGCCTCTGGGGTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSARSLLF*PLGWNP
Trigger: CGGATTCCACCCCAGAGGCCAAAACAGGAGAGAGCG...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCGTGGCCTGTGCCTTGTaGATTCCTCCTCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAVACAL*IPPLEA
Trigger: TGCCTCCAGAGGAGGAATCCACAAGGCACAGGCCAC...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGCTCGGTTCCTTATTCTaGTGTACACTGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVLGSLF*CTLQAA
Trigger: AGCAGCCTGCAGTGTACATCAGAATAAGGAACCGAG...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCTGGGGAATCAAGACATaGCTTCCTAGTATGAGTGCC +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCWGIKT*LPSMSA
Trigger: GGCACTCATACTAGGAAGGCATGTCTTGATTCCCCA...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTACCAGGCCAGGCATGCTaGAGGTGTCGGGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVPGQAC*RCRETG
Trigger: TCCTGTTTCCCGACACCTCCAGCATGCCTGGCCTGG...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCGTCACAGCATGTCCCTaGAGAGCCATAATGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAVTACP*RAIMQA
Trigger: CGCCTGCATTATGGCTCTCCAGGGACATGCTGTGAC...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTGGCAGCCGCAGGAAGTaGGGTCAACGTAGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SEECEADAHDRRRGGIRGGSRRK*GQRRGP
Trigger: AGGGCCTCTACGTTGACCTCACTTCCTGCGGCTGCC...ACCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGTTGTCTTCCACCCACTaGATGCTGTCCAATTTGGAA +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQLSSTH*MLSNLE
Trigger: TTCCAAATTGGACAGCATTCAGTGGGTGGAAGACAA...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGGTTGGAGTTTTCCTCTaGAATTCTGGACAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVVGVFL*NSGQGP
Trigger: AGGCCCTTGTCCAGAATTTCAGAGGAAAACTCCAAC...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTCTCCTCTCCCGGCACTaGTGGCAGCCCATCAGTCAC +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGLLSRH*WQPISH
Trigger: GTGACTGATGGGCTGCCATCAGTGCCGGGAGAGGAG...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTGTGGGCTCCCTGCCTaGGGCACATTCTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSACGLPA*GTFCFF
Trigger: AAAGAAACAGAATGTGCCTCAGGCAGGGAGCCCACA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGCTCACCAACTGCAGATaGAACACTGGTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVLTNCR*NTGLFF
Trigger: GAAGAAGAGACCAGTGTTTCATCTGCAGTTGGTGAG...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGGACAGTTTTCAATTCTaGCATAGCAGGCATCACCTC +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQDSFQF*HSRHHL
Trigger: GAGGTGATGCCTGCTATGTCAGAATTGAAAACTGTC...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCCTCATTCTCCACTTCTaGCTGAGCTGCCCGTGTTCA +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSALILHF*LSCPCS
Trigger: TGAACACGGGCAGCTCAGGCAGAAGTGGAGAATGAG...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGGGTGCCACCAAATCTaGTCCCCGTCTCTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVGCHQI*SPSLRS
Trigger: ACTCCTCAGAGACGGGGACCAGATTTGGTGGCACCC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGCCCACTTCCAAAATCTaGGCACTCTTGATAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVPTSKI*ALLIGN
Trigger: GTTCCCTATCAAGAGTGCCCAGATTTTGGAAGTGGG...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCCCTTCTTTTTCAAAATaGTGGACCAGGTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCPSFSK*WTRSVL
Trigger: CAGAACTGACCTGGTCCATCATTTTGAAAAAGAAGG...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTCCAACACACACTTCTaGCCTTGGAAATGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSASNTHF*PWKWGF
Trigger: GAAGCCCCATTTCCAAGGTCAGAAGTGTGTGTTGGA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGGTACCGGAAAGACATaGTGGGTCCACTTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVGTGKT*WVHLRP
Trigger: GGGCCTTAAGTGGACCCATCATGTCTTTCCGGTACC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCGGGGCTGATTCACAATaGCATGAGTCTTGTCATAAT +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCGADSQ*HESCHN
Trigger: ATTATGACAAGACTCATGTCATTGTGAATCAGCCCC...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTAGGCCAGGCCAGGCATaGTGGAGGTGTCGGGAAACA +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGRPGQA*WRCRET
Trigger: TGTTTCCCGACACCTCCAGCATGCCTGGCCTGGCCT...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGGACCAGGTCAGTTCTaGTCTCAGACCTTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVGPGQF*SQTFRR
Trigger: CCTGCGAAAGGTCTGAGAGCAGAACTGACCTGGTCC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCAAGTTGTGGGCTCCCTaGCTGAGGCACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAKLWAP*LRHILF
Trigger: AAACAGAATGTGCCTCAGGCAGGGAGCCCACAACTT...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTACGTCTGGTCAGCAGATaGCTCAGAACACTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVRLVSR*LRTLLA
Trigger: TGCCAGCAGTGTTCTGAGGCATCTGCTGACCAGACG...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTTACCACATCTAGCTTaGCAGGCATCCCCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSALPHLA*QASPQR
Trigger: TCTCTGAGGGGATGCCTGCCAAGCTAGATGTGGTAA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCGAATGCTGTCCAATTTaGAATCTCCTTAGGCGTAAG +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCECCPI*NLLRRK
Trigger: CTTACGCCTAAGGAGATTCCAAATTGGACAGCATTC...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGACATCTGGTATTGCTaGGGCTGGGTAGCCCTCATA +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVDIWYC*GWVALI
Trigger: TATGAGGGCTACCCAGCCTCAGCAATACCAGATGTC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGTTCTCTAAAATGTACTaGTCGCCGCAGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVFSKMY*SPQKNF
Trigger: GAAGTTCTTCTGCGGCGATCAGTACATTTTAGAGAA...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGCCAGAGCAAAAAGGCTaGTGGAAGGTTCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVPEQKG*WKVLQK
Trigger: TTTTTGAAGAACCTTCCATCAGCCTTTTTGCTCTGG...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGTGGCATTTTTCACCATaGGGAAGAAATTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQWHFSP*GRNSLD
Trigger: ATCCAAGGAATTTCTTCCTCATGGTGAAAAATGCCA...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCGAGACGGAACAGAATTaGGATCCTCAGAGGTATCTC +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAETEQN*DPQRYL
Trigger: GAGATACCTCTGAGGATCTCAATTCTGTTCCGTCTC...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGAAACTCTCTTTCAGTTaGATCCCTGCTAACACCACT +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVKLSFS*IPANTT
Trigger: AGTGGTGTTAGCAGGGATTCAACTGAAAGAGAGTTT...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGTGGTTCCAATTGGATTaGTCGGATAGACAAGATTGT +
Preference number: 4 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQWFQLD*SDRQDC
Trigger: ACAATCTTGTCTATCCGACCAATCCAATTGGAACCA...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGTCGATACACTCTCCTTaGAAGCCTGCTTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVSIHSP*KPALLN
Trigger: ATTCAGTAAAGCAGGCTTCCAAGGAGAGTGTATCGA...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCTCCACAAGGCCACCTTaGCTCCAGGAGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LRTKALKIFIGARYDAVCSTRPP*LQECPG
Trigger: GCCGGGACACTCCTGGAGCCAAGGTGGCCTTGTGGA...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTCCCACACTCCACCAATaGCACGAATCGATCCGATGC +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGPTLHQ*HESIRC
Trigger: GCATCGGATCGATTCGTGTCATTGGTGGAGTGTGGG...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTACTCTCTCCCTTAGTGTaGCAAAAGGAGGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVLSPLV*QKEGDV
Trigger: CACATCTCCCTCCTTTTGTCACACTAAGGGAGAGAG...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTACACACATCCTTGGAGTaGGGTCACCTCTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVHTSLE*GHLCFF
Trigger: AAAGAAGCAGAGGTGACCTCACTCCAAGGATGTGTG...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCCATACGGACTCAGTCTaGCTGCATGGTCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCHTDSV*LHGPEH
Trigger: GTGTTCAGGACCATGCAGGCAGACTGAGTCCGTATG...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCCTCTCCTTGGAAGCCTaGTTTACTGAATGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSALSLEA*FTECFE
Trigger: CTCAAAGCATTCAGTAAAGCAGGCTTCCAAGGAGAG...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCAACCGTGCATCTTCATaGCTAATTGATTTATGTGGA +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCNRASS*LIDLCG
Trigger: TCCACATAAATCAATTAGGCATGAAGATGCACGGTT...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGCTGGAGCCCTCAGGTaGAAACACATTTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVAGALR*KHIFLQ
Trigger: CTGGAGAAAAATGTGTTTGCACCTGAGGGCTCCAGC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCTGGCATAAGAGGGGCTaGTTCATGTTTCATAATATT +
Preference number: 4 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCWHKRG*FMFHNI
Trigger: AATATTATGAAACATGAAGCAGCCCCTCTTATGCCA...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTATCTCAGTGCTGCCACTaGAATCCTCTGGAGCCATTA +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVSQCCH*NPLEPL
Trigger: TAATGGCTCCAGAGGATTCCAGTGGCAGCACTGAGA...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACCAGGCCAGGCATGCTaGAGGTGTCGGGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTPGQAC*RCRETG
Trigger: TCCTGTTTCCCGACACCTCCAGCATGCCTGGCCTGG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGGGGATGGAAGGATCTaGCAAGTGGAAGGTAACATG +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVGDGRI*QVEGNM
Trigger: CATGTTACCTTCCACTTGCCAGATCCTTCCATCCCC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCGCCTTCCCAAGAAATTaGAACCTTCATAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAAFPRN*NLHKRS
Trigger: GGATCGCTTATGAAGGTTCCAATTTCTTGGGAAGGC...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCTGTCCGTGCATCTGCTaGGTTCCCAGTGACTGTCAA +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCCPCIC*VPSDCQ
Trigger: TTGACAGTCACTGGGAACCCAGCAGATGCACGGACA...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAATCCTCGCTGGGTGGCTaGCAGCCTCCTCCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKSSLGG*QPPPPF
Trigger: AAAGGGAGGAGGAGGCTGCCAGCCACCCAGCGAGGA...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCGAAAATTTCCACTTCTaGCATCACAGATGCAACCCC +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAENFHF*HHRCNP
Trigger: GGGGTTGCATCTGTGATGCCAGAAGTGGAAATTTTC...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTGTTTGCACTCTCCCTTaGCTTGGAAGAGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGVCTLP*LGRAMV
Trigger: CACCATGGCTCTTCCAAGTCAAGGGAGAGTGCAAAC...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCCCGTCTCTGAGGAGTaGGTCCTGGAAGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LRTKALKIFIGARYDAVCPVSEE*VLEVCK
Trigger: CTTGCAGACTTCCAGGACTCACTCCTCAGAGACGGG...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp GCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCTTCATCCCAGATCTGGTCCCCGTCTCTaGGGAGTGAGTCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ALKIFIGARYDAVCLHPRSGPRL*GVSPGS
Trigger: ACTTCCAGGACTCACTCCTCAGAGACGGGGACCAGA...TCTGGGATGAAGGCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp GCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCTTCATCCCAGAGGGTGCTTCCTGTTCTaGAGAAGCCAGTCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: ALKIFIGARYDAVCLHPRGCFLF*RSQSRS
Trigger: AGACCGGGACTGGCTTCTTCAGAACAGGAAGCACCC...TCTGGGATGAAGGCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCCCAGAGCAAAAAGGCTaGTGGAAGGTTCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAPEQKG*WKVLQK
Trigger: TTTTTGAAGAACCTTCCATCAGCCTTTTTGCTCTGG...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCCTCGGTTCCTTATTCTaGTGTACACTGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCLGSLF*CTLQAA
Trigger: AGCAGCCTGCAGTGTACATCAGAATAAGGAACCGAG...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCCTGCTGGGTTCCCAGTaGCTGTCAAGTATTCATCCT +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCLLGSQ*LSSIHP
Trigger: AGGATGAATACTTGACAGTCACTGGGAACCCAGCAG...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCAAGTTCCCGAGGAACTaGAAAAAGCTTTCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAKFPRN*KKLSFG
Trigger: GCCAAAAGAAAGCTTTTTTCAGTTCCTCGGGAACTT...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGATTTCACATGTGCTTTaGTTTACTGCCTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVISHVL*FTACSD
Trigger: ATCAGAACAGGCAGTAAATCAAAGCACATGTGAAAT...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTATTTCCATTCCCAAAGTaGTGGGCAATTCCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVFPFPK*WAIPRV
Trigger: AACCCGAGGAATTGCCCATCACTTTGGGAATGGAAA...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTACAACTTTTATCAGTaGCCCATTCGGGAAAGACCA +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAYNFYQ*PIRERP
Trigger: TGGTCTTTCCCGAATGGGGCACTGATAAAAGTTGTA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCTCACAGTGTCCCTTATaGTTCTGGAGCCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCSQCPL*FWSQHV
Trigger: CACATGCTGGCTCCAGAAGCATAAGGGACACTGTGA...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTCTAGTATCTGCTGCTaGCATCTTGTGATTATCCAC +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSASSICC*HLVIIH
Trigger: GTGGATAATCACAAGATGGCAGCAGCAGATACTAGA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGAACACGGAAATACTTaGACACTGGTTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVEHGNT*TLVPEG
Trigger: CCCTTCAGGAACCAGTGTCCAAGTATTTCCGTGTTC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAACCCAGGGTCAGTCTTaGGGCACAGCTCTATCACCG +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTTQGQS*GTALSP
Trigger: CGGTGATAGAGCTGTGCCCCAAGACTGACCCTGGGT...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGAGAAACAGAGGGTGTaGACAAGGCTTTTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVEKQRV*TRLFVF
Trigger: GAAGACGAAAAGCCTTGTCCACACCCTCTGTTTCTC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCGCCTCAGAACACTGCTaGCATGATCGGTTAACTGAC +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCASEHC*HDRLTD
Trigger: GTCAGTTAACCGATCATGCCAGCAGTGTTCTGAGGC...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCACTCTACATAAGACTTaGAAATTCCAGCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSATLHKT*KFQRVP
Trigger: AGGAACACGCTGGAATTTTCAAGTCTTATGTAGAGT...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAATTCTCCACTTCTGCCTaGGCTGCCCGTGTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKFSTSA*AARVQS
Trigger: GGACTGAACACGGGCAGCTCAGGCAGAAGTGGAGAA...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACACGGTTCTCAGTGCTaGCACTGGAATCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTHGSQC*HWNPLE
Trigger: CTCCAGAGGATTCCAGTGGCAGCACTGAGAACCGTG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp AGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGCATACGGACTCAGTCTaGCTGCATGGTCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: RGGIRGVFQLKNVFPRVWHTDSV*LHGPEH
Trigger: GTGTTCAGGACCATGCAGGCAGACTGAGTCCGTATG...CCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTAGGCCCCACAAGCGCTaGTATCTTCAAAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGRPHKR*YLQSLL
Trigger: AAGGAGACTTTGAAGATAGCAGCGCTTGTGGGGCCT...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTATATTCTGATGTACACTaGAGGCTGCTTCATAGGACG +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVYSDVH*RLLHRT
Trigger: CGTCCTATGAAGCAGCCTGCAGTGTACATCAGAATA...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCACTTCTGCCTGAGCTaGCCGTGTTCAGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: LRTKALKIFIGARYDAVCHFCLS*PCSVHK
Trigger: CTTGTGGACTGAACACGGGCAGCTCAGGCAGAAGTG...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp TCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTGAAGGATCTGGCAAGTaGAAGGTAACATGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SEECEADAHDRRRGGIRGEGSGK*KVTCSL
Trigger: GAGGGAGCATGTTACCTTCCACTTGCCAGATCCTTC...ACCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTATTTTGGGCATCTCAGTaGTTTCCTGTTCGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVFWASQ*FPVRCL
Trigger: AAGACAGCGAACAGGAAACCACTGAGATGCCCAAAA...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTATTTCCTCTGAAATTCTaGACAAGGGCCTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVFPLKF*TRALAT
Trigger: AGTAGCCAAGGCCCTTGTCCAGAATTTCAGAGGAAA...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCTTCATTACATCCTCTTaGGCTAGATGCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCFITSS*ARCSWQ
Trigger: CTGCCAGGAGCATCTAGCCCAAGAGGATGTAATGAA...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp AGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGTCCAACACACACTTCTaGCCTTGGAAATGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RGGIRGVFQLKNVFPRVWSNTHF*PWKWGF
Trigger: GAAGCCCCATTTCCAAGGTCAGAAGTGTGTGTTGGA...CCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTGGGTGCTTCCTGTTCTaGAGAAGCCAGTCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAGCFLF*RSQSRS
Trigger: AGACCGGGACTGGCTTCTTCAGAACAGGAAGCACCC...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAACCCACACTCCACCAATaGCACGAATCGATCCGATGC +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKPTLHQ*HESIRC
Trigger: GCATCGGATCGATTCGTGTCATTGGTGGAGTGTGGG...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAAGGCCCAACTGCTCCTaGGGCCTCCATGGCTATTTT +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKRPNCS*GLHGYF
Trigger: AAAATAGCCATGGAGGCCTCAGGAGCAGTTGGGCCT...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTATTTTATAGTCCTCACTaGCAAGGAAGCCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVFYSPH*QGSQSS
Trigger: TGAAGACTGGCTTCCTTGTCAGTGAGGACTATAAAA...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTACTTCTATTTCTCCAATaGTCTTCTCCATGTACTCCC +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVLLFLQ*SSPCTP
Trigger: GGGAGTACATGGAGAAGAGCATTGGAGAAATAGAAG...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCCTCTCCTTGGAAGCCTaGTTTACTGAATGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCLSLEA*FTECFE
Trigger: CTCAAAGCATTCAGTAAAGCAGGCTTCCAAGGAGAG...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAACACTTCTGCCTGAGCTaGCCGTGTTCAGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKHFCLS*PCSVHK
Trigger: CTTGTGGACTGAACACGGGCAGCTCAGGCAGAAGTG...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCGAGAAGAGGAAATGTTaGACTGAGGAACATCTCTGG +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCEKRKC*TEEHLW
Trigger: CCAGAGATGTTCCTCAGTGCAACATTTCCTCTTCTC...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCACTCTCCCTTGACTTaGAAGAGCCATGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: LRTKALKIFIGARYDAVCHSPLT*KSHGDQ
Trigger: CTGGTCACCATGGCTCTTCCAAGTCAAGGGAGAGTG...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACACTCTCCCTTGACTTaGAAGAGCCATGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTHSPLT*KSHGDQ
Trigger: CTGGTCACCATGGCTCTTCCAAGTCAAGGGAGAGTG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp AGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGGGGGATGGAAGGATCTaGCAAGTGGAAGGTAACATG +
Preference number: 4 (lower is better)
Translates to: RGGIRGVFQLKNVFPRVWGDGRI*QVEGNM
Trigger: CATGTTACCTTCCACTTGCCAGATCCTTCCATCCCC...CCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCCAGACTGGAGGTCGTTaGTTCACTGAACTCTACATA +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCQTGGR*FTELYI
Trigger: TATGTAGAGTTCAGTGAACCAACGACCTCCAGTCTG...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTCTAGTAGGAATTGCTaGCCTTTGAAATGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSASSRNC*PLKCSF
Trigger: AAAGGAACATTTCAAAGGCCAGCAATTCCTACTAGA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGAATGCTGTCCAATTTaGAATCTCCTTAGGCGTAAG +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVECCPI*NLLRRK
Trigger: CTTACGCCTAAGGAGATTCCAAATTGGACAGCATTC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAGAGCCAGCATGTGCCTaGGGACTTGAGTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKEPACA*GLESEL
Trigger: AAGCTCTGACTCAAGTCCCCAGGCACATGCTGGCTC...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAATGTCCCTTATGCTTCTaGAGCCAGCATGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKCPLCF*SQHVPG
Trigger: CCCAGGCACATGCTGGCTCCAGAAGCATAAGGGACA...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGCAAATATCCTTTTGTaGCTACGTCTTTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVANILL*LRLCCL
Trigger: CAGACAGCAAAGACGTAGCCACAAAAGGATATTTGC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCTGGGTTATCTACAGCTaGCTTGTCACCACACTTATG +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCWVIYS*LVTTLM
Trigger: CATAAGTGTGGTGACAAGCCAGCTGTAGATAACCCA...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCCTCTGTTGTTCCATTTaGCTCTTCAGTGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCLCCSI*LFSVSL
Trigger: CAAAGAGACACTGAAGAGTCAAATGGAACAACAGAG...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCTGCTGGGTTCCCAGTaGCTGTCAAGTATTCATCCT +
Preference number: 4 (lower is better)
Translates to: LRTKALKIFIGARYDAVCLLGSQ*LSSIHP
Trigger: AGGATGAATACTTGACAGTCACTGGGAACCCAGCAG...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATTTCTCCACTTCTGCCTaGGCTGCCCGTGTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: KGGLHLSFSEECEADAHDFSTSA*AARVQS
Trigger: GGACTGAACACGGGCAGCTCAGGCAGAAGTGGAGAA...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTTCTCTTCTTCCTCTTTaGCTCCTGACATACTGTCCA +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGSLLPL*LLTYCP
Trigger: TGGACAGTATGTCAGGAGTCAAAGAGGAAGAAGAGA...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GTGAGTTATCTAGTTACAGCTGAAGTAGTTTCTCTGAAACAAGTTTCCTACTTCGACCACCGGCCATGCTaGAGACTGGAGGTCGTTGGT +
Preference number: 4 (lower is better)
Translates to: VSYLVTAEVVSLKQVSYFDHRPC*RLEVVG
Trigger: ACCAACGACCTCCAGTCTGCAGCATGGCCGGTGGTC...GAAGTAGGAAACTTGTTTCAGAGAAACTACTTCAGCTGTAACTAGATAACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATTCTGACCACCGGCCATaGTGCAGACTGGAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: KGGLHLSFSEECEADAHDSDHRP*CRLEVV
Trigger: AACGACCTCCAGTCTGCAGCATGGCCGGTGGTCAGA...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCAGGCCCCACAAGCGCTaGTATCTTCAAAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LRTKALKIFIGARYDAVCRPHKR*YLQSLL
Trigger: AAGGAGACTTTGAAGATAGCAGCGCTTGTGGGGCCT...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAACATTGTCCGTGCATCTaGTGGGTTCCCAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKHCPCI*WVPSDC
Trigger: ACAGTCACTGGGAACCCAGCAGATGCACGGACAATG...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTGAAACCATATTTTTCTaGGAGTCTCGGGCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGETIFF*ESRAGN
Trigger: GTTACCTGCCCGAGACTCGCAGAAAAATATGGTTTC...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAACAGGCGAGACCTCACTaGACAGAACATCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: VYIYHSLKNVRQMHMIGEQARPH*TEHPPA
Trigger: CGCAGGAGGATGTTCTGTCCAGTGAGGTCTCGCCTG...TTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCCATCTTTCCAGGCCTTaGATTACACTTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCHLSRP*ITLQSL
Trigger: CAAACTCTGAAGTGTAATCCAAGGCCTGGAAAGATG...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAATCAATGTCCCACTTCTaGGTCTCTTCCCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKSMSHF*VSSPSR
Trigger: CCTGGAAGGGGAAGAGACCCAGAAGTGGGACATTGA...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTGAGGAAGAAATTCCTTaGATTCAAGGGTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGEEEIP*IQGLRT
Trigger: CGTCCTCAACCCTTGAATCCAAGGAATTTCTTCCTC...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACTCCTTGAATCCGTCTaGTCAGCAGATGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTLLESV*SADASE
Trigger: TTCTGAGGCATCTGCTGACCAGACGGATTCAAGGAG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
3UTR CAA 72 bp CCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTaGTGGACACGAGAGGAAAACCAGGAAATTATTAGG +
Preference number: 4 (lower is better)
Translates to: PRGARRRSWFMS*WTREENQEIIR
Trigger: CCTAATAATTTCCTGGTTTTCCTCTCGTGTCCACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCACTCTACATAAGACTTaGAAATTCCAGCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCTLHKT*KFQRVP
Trigger: AGGAACACGCTGGAATTTTCAAGTCTTATGTAGAGT...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTGGAATTGCTGGCCTTTaGAATGTTCCTTTTCATAGG +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGGIAGL*NVPFHR
Trigger: CCTATGAAAAGGAACATTTCAAAGGCCAGCAATTCC...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCACATCAAGACATGTATaGCTGGCCTTGGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCTSRHV*LALDLK
Trigger: CTTTAAATCCAAGGCCAGTCATACATGTCTTGATGT...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTATTTACTGCCTGTTCTaGTACCAAGAACTCCCTAAC +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGIYCLF*YQELPN
Trigger: GTTAGGGAGTTCTTGGTATCAGAACAGGCAGTAAAT...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTGCATCACCTCAGCTTTaGCAATGTCCCCCTCGCTAT +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAASPQL*QCPPRY
Trigger: ATAGCGAGGGGGACATTGGCAAAGCTGAGGTGATGC...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCAGACAAAGGCTAAGTTaGACTCTTCCTTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCRQRLS*TLPFLL
Trigger: GAGAAGAAAAGGAAGAGTCCAACTTAGCCTTTGTCT...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAGAACACGGAAATACTTaGACACTGGTTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTEHGNT*TLVPEG
Trigger: CCCTTCAGGAACCAGTGTCCAAGTATTTCCGTGTTC...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTACTCCTGAGGCCTCCATaGCTATTTTTATTTAAAATG +
Preference number: 4 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVLLRPP*LFLFKM
Trigger: CATTTTAAATAAAAATAGCCATGGAGGCCTCAGGAG...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAAGCTTCACAGTTCTGTaGCCTGTGCCTTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKSFTVL*PVPCGF
Trigger: GAATCCACAAGGCACAGGCCACAGAACTGTGAAGCT...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACATTCAGTCCACCCATTTaGAGAGGATGCAGTGATTTC +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTFSPPI*RGCSDF
Trigger: GAAATCACTGCATCCTCTTCAAATGGGTGGACTGAA...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp AGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGTTCTCTAAAATGTACTaGTCGCCGCAGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: RGGIRGVFQLKNVFPRVWFSKMY*SPQKNF
Trigger: GAAGTTCTTCTGCGGCGATCAGTACATTTTAGAGAA...CCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGCAGTTTCAGGACCTaGAGGAGATTGGCATTTTTC +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTSSFRT*RRLAFF
Trigger: GAAAAATGCCAATCTCCTTCAGGTCCTGAAACTGCT...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACATCCGCAACTGTTACTTaGGAAGAGGAAATGTTGCAC +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTSATVT*EEEMLH
Trigger: GTGCAACATTTCCTCTTCTCAAGTAACAGTTGCGGA...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAACGGTCTCTGCTTTCATaGGATTGTCAAAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKRSLLS*DCQSRQ
Trigger: CTGCCTACTTTGACAATCTCATGAAAGCAGAGACCG...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACATTCCTCTTTGACTCCTaGCATACTGTCCACACCTTT +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTFLFDS*HTVHTF
Trigger: AAAGGTGTGGACAGTATGTCAGGAGTCAAAGAGGAA...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCACTGTAGGGAGAGATaGAGACAGACATTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAHCRER*RQTLSV
Trigger: CACGGACAATGTCTGTCTGCATCTCTCCCTACAGTG...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAGATGCCTCAGAACACTaGTGGCATGATCGGTTAACT +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKDASEH*WHDRLT
Trigger: AGTTAACCGATCATGCCAGCAGTGTTCTGAGGCATC...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTAGATTTTGTACCTCTTaGCTTCCACCGATAAGAACA +
Preference number: 4 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGRFCTS*LPPIRT
Trigger: TGTTCTTATCGGTGGAAGCCAAGAGGTACAAAATCT...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TCAGATTTTCGGTCTTCGCTTTCCTTTATCACATGTGGATGCTCTGAAGCAAATTGTCATCCTCATAGATaGGGCTCAGGGCTAAGGGAT +
Preference number: 4 (lower is better)
Translates to: SDFRSSLSFITCGCSEANCHPHR*GSGLRD
Trigger: ATCCCTTAGCCCTGAGCCCCATCTATGAGGATGACA...ATTTGCTTCAGAGCATCCACATGTGATAAAGGAAAGCGAAGACCGAAAATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTGAAGGATCTGGCAAGTaGAAGGTAACATGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAEGSGK*KVTCSL
Trigger: GAGGGAGCATGTTACCTTCCACTTGCCAGATCCTTC...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCTTCTGTCCTCCGCTTaGGGAATCTTCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLALLSSA*GIFTAS
Trigger: AGAAGCAGTGAAGATTCCCCAAGCGGAGGACAGAAG...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAATGCCTTTTCTCTATGTaGCATAAGAGGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKCLFSM*HKRGCF
Trigger: GAAGCAGCCCCTCTTATGCCACATAGAGAAAAGGCA...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCTTCATCCCAGACTCTGTTGTTCCATTTaGCTCTTCAGTGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: ALKIFIGARYDAVCLHPRLCCSI*LFSVSL
Trigger: CAAAGAGACACTGAAGAGTCAAATGGAACAACAGAG...TCTGGGATGAAGGCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAGGAATTGCTGGCCTTTaGAATGTTCCTTTTCATAGG +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTGIAGL*NVPFHR
Trigger: CCTATGAAAAGGAACATTTCAAAGGCCAGCAATTCC...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTGAGGAAATGTTGCACTaGGGAACATCTCTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAEEMLH*GTSLGS
Trigger: AGAACCCAGAGATGTTCCTCAGTGCAACATTTCCTC...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCTTCTATTTCTCCAATaGTCTTCTCCATGTACTCCC +
Preference number: 4 (lower is better)
Translates to: LRTKALKIFIGARYDAVCLLFLQ*SSPCTP
Trigger: GGGAGTACATGGAGAAGAGCATTGGAGAAATAGAAG...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACTATCACCGGAATGCTaGAATCCTTTAAGACACGTT +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTLSPEC*NPLRHV
Trigger: AACGTGTCTTAAAGGATTGCAGCATTCCGGTGATAG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTCCACTTTACATaGCTTTTCTCTATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTRVHFT*LFSMWH
Trigger: ATGCCACATAGAGAAAAGGCATGTAAAGTGGACCCT...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAGACAAAGTTCCTTTCTaGGTGCTTCCTGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKDKVPF*VLPVLK
Trigger: CTTCAGAACAGGAAGCACCCAGAAAGGAACTTTGTC...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GTGAGTTATCTAGTTACAGCTGAAGTAGTTTCTCTGAAACAAGTTTCCTACTTCTGTCCGTGCATCTGCTaGGTTCCCAGTGACTGTCAA +
Preference number: 4 (lower is better)
Translates to: VSYLVTAEVVSLKQVSYFCPCIC*VPSDCQ
Trigger: TTGACAGTCACTGGGAACCCAGCAGATGCACGGACA...GAAGTAGGAAACTTGTTTCAGAGAAACTACTTCAGCTGTAACTAGATAACTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGGTGGACTGTCGGTTaGAGTTTTCCTCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLARWTVG*SFPLKF
Trigger: GAATTTCAGAGGAAAACTCCAACCGACAGTCCACCG...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAACCAAACCAAGCCTTTTaGTTTCTGTTTCACACGGTG +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKPNQAF*FLFHTV
Trigger: CACCGTGTGAAACAGAAACCAAAAGGCTTGGTTTGG...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAGAAAACGTTAGCCTCTaGCTCAGCTTTCATACTGTT +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTENVSL*LSFHTV
Trigger: AACAGTATGAAAGCTGAGCCAGAGGCTAACGTTTTC...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTGCAACGCCGCCTTGTTaGGAATTCTCTAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAATPPC*EFSKRK
Trigger: TTTTCTCTTAGAGAATTCTCAACAAGGCGGCGTTGC...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTATTCAATCATTGTCCGTGCATCTaGTGGGTTCCCAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: LLGIPDSDKTILRTSLFNHCPCI*WVPSDC
Trigger: ACAGTCACTGGGAACCCAGCAGATGCACGGACAATG...ATTGAATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACATGGAAGGTGTAAGTaGCATTTTCCCTACATTTAC +
Preference number: 4 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTHGRCK*HFPYIY
Trigger: GTAAATGTAGGGAAAATGGCACTTACACCTTCCATG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCAGACTGGAGGTCGTTaGTTCACTGAACTCTACATA +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAQTGGR*FTELYI
Trigger: TATGTAGAGTTCAGTGAACCAACGACCTCCAGTCTG...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTAAAGTAGGCAGTGGTTaGGGAATCAAGACATGCCTT +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAKVGSG*GIKTCL
Trigger: AAGGCATGTCTTGATTCCCCAACCACTGCCTACTTT...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
3UTR CAA 72 bp TTGCTTAGCTGTAATTGTTTAAAATGGGAGGAAAACTaGGTTGTCTGTCACCGAGCAGACAAAGTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LLSCNCLKWEEN*VVCHRADKVEA
Trigger: GGCTTCTACTTTGTCTGCTCGGTGACAGACAACCAAGTTTTCCTCCCATTTTAAACAATTACAGCTAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CAA 72 bp TTCCTAGAGTTTGGGTTGTGGCTGGGACAATTACTTTaGACTGAAAGGTCATGTGTCTTTACAGAAGCATTG +
Preference number: 4 (lower is better)
Translates to: FLEFGLWLGQLL*TERSCVFTEAL
Trigger: CAATGCTTCTGTAAAGACACATGACCTTTCAGTCAAAAGTAATTGTCCCAGCCACAACCCAAACTCTAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAACAGACATTATTTTCTTaGGCCTTACTACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKQTLFS*ALLLCP
Trigger: AGGACACAGTAGTAAGGCTCAAGAAAATAATGTCTG...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR TCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTACTTTCCAGGTGAGATaGTTCAAACAGTGTGATCGA +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLATFQVR*FKQCDR
Trigger: TCGATCACACTGTTTGAATCATCTCACCTGGAAAGT...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TCAGATTTTCGGTCTTCGCTTTCCTTTATCACATGTGGATGCTCTGAAGCAAATTACAACTTTTATCAGTaGCCCATTCGGGAAAGACCA +
Preference number: 4 (lower is better)
Translates to: SDFRSSLSFITCGCSEANYNFYQ*PIRERP
Trigger: TGGTCTTTCCCGAATGGGGCACTGATAAAAGTTGTA...ATTTGCTTCAGAGCATCCACATGTGATAAAGGAAAGCGAAGACCGAAAATCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp GTGAGTTATCTAGTTACAGCTGAAGTAGTTTCTCTGAAACAAGTTTCCTACTTCACTGTGTCCTCCTCTTaGACATCTGGTATTGCTGAG +
Preference number: 4 (lower is better)
Translates to: VSYLVTAEVVSLKQVSYFTVSSS*TSGIAE
Trigger: CTCAGCAATACCAGATGTCCAAGAGGAGGACACAGT...GAAGTAGGAAACTTGTTTCAGAGAAACTACTTCAGCTGTAACTAGATAACTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATGACAAAGTTCCTTTCTaGGTGCTTCCTGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KGGLHLSFSEECEADAHDDKVPF*VLPVLK
Trigger: CTTCAGAACAGGAAGCACCCAGAAAGGAACTTTGTC...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATACTTTCCAGGTGAGATaGTTCAAACAGTGTGATCGA +
Preference number: 4 (lower is better)
Translates to: KGGLHLSFSEECEADAHDTFQVR*FKQCDR
Trigger: TCGATCACACTGTTTGAATCATCTCACCTGGAAAGT...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp GTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGGGGCTGATTCACAATaGCATGAGTCTTGTCATAAT +
Preference number: 4 (lower is better)
Translates to: VYIYHSLKNVRQMHMIGEGADSQ*HESCHN
Trigger: ATTATGACAAGACTCATGTCATTGTGAATCAGCCCC...TTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp GTGAGTTATCTAGTTACAGCTGAAGTAGTTTCTCTGAAACAAGTTTCCTACTTCTATTCTGATGTACACTaGAGGCTGCTTCATAGGACG +
Preference number: 4 (lower is better)
Translates to: VSYLVTAEVVSLKQVSYFYSDVH*RLLHRT
Trigger: CGTCCTATGAAGCAGCCTGCAGTGTACATCAGAATA...GAAGTAGGAAACTTGTTTCAGAGAAACTACTTCAGCTGTAACTAGATAACTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTAACTGTTCCGGTCTCTaGTTTCATGAGATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLANCSGL*FHEIVK
Trigger: TTTGACAATCTCATGAAAGCAGAGACCGGAACAGTT...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR GCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAATATCACATCAGTCTCTaGAACAGTACTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKYHISL*NSTFFI
Trigger: GATGAAGAAAGTACTGTTGCAGAGACTGATGTGATA...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GTGAGTTATCTAGTTACAGCTGAAGTAGTTTCTCTGAAACAAGTTTCCTACTTCGCCTTCCCAAGAAATTaGAACCTTCATAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: VSYLVTAEVVSLKQVSYFAFPRN*NLHKRS
Trigger: GGATCGCTTATGAAGGTTCCAATTTCTTGGGAAGGC...GAAGTAGGAAACTTGTTTCAGAGAAACTACTTCAGCTGTAACTAGATAACTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR CAA 72 bp GTACTGTGTGTACTGGTAGTGCCTCTAAACCTGGTTTaGCTTAGCTGTAATTGTTTAAAATGGGAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: VLCVLVVPLNLV*LSCNCLKWEEN
Trigger: GTTTTCCTCCCATTTTAAACAATTACAGCTAAGCAAAACCAGGTTTAGAGGCACTACCAGTACACACAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CAA 72 bp CATACATTCTGCAGCAACTTAACTACTCAAAGTCGGTaGTTGGAGTCTGAGCTTTTTATGTGGGGAATTGAT +
Preference number: 4 (lower is better)
Translates to: HTFCSNLTTQSR*LESELFMWGID
Trigger: ATCAATTCCCCACATAAAAAGCTCAGACTCCAACAACCGACTTTGAGTAGTTAAGTTGCTGCAGAATGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp TTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTATTCAATTTGTCTTCCACCCACTaGATGCTGTCCAATTTGGAA +
Preference number: 4 (lower is better)
Translates to: LLGIPDSDKTILRTSLFNLSSTH*MLSNLE
Trigger: TTCCAAATTGGACAGCATTCAGTGGGTGGAAGACAA...ATTGAATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR TCA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATACATCAAGACATGTATaGCTGGCCTTGGATTTAAAG +
Preference number: 4 (lower is better)
Translates to: KGGLHLSFSEECEADAHDTSRHV*LALDLK
Trigger: CTTTAAATCCAAGGCCAGTCATACATGTCTTGATGT...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAACAAATTTTCTTGGGCTaGATAAATAACCTCATTGAC +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKQIFLG*INNLID
Trigger: GTCAATGAGGTTATTTATGCAGCCCAAGAAAATTTG...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAGACAAAGGCTAAGTTaGACTCTTCCTTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KGGLHLSFSEECEADAHDRQRLS*TLPFLL
Trigger: GAGAAGAAAAGGAAGAGTCCAACTTAGCCTTTGTCT...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAGTCATATCGGATTTTTaGAGAAACAACTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKVISDF*RNNSFS
Trigger: AGAAAAGGAGTTGTTTCTCCAAAAATCCGATATGAC...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CCA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTTCTAGTAGGAATTGCTaGCCTTTGAAATGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLASSRNC*PLKCSF
Trigger: AAAGGAACATTTCAAAGGCCAGCAATTCCTACTAGA...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
3UTR CAA 72 bp AATCCAAGTACTCTAGTGCCTTTATGCAGAGAATTGTaGATTTTCTCTATACATACATTCAGTGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: NPSTLVPLCREL*IFSIHTFSERG
Trigger: TCCCCGCTCACTGAATGTATGTATAGAGAAAATCAACAATTCTCTGCATAAAGGCACTAGAGTACTTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR GCA 90 bp TTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTATTCAATCTATCACCGGAATGCTaGAATCCTTTAAGACACGTT +
Preference number: 4 (lower is better)
Translates to: LLGIPDSDKTILRTSLFNLSPEC*NPLRHV
Trigger: AACGTGTCTTAAAGGATTGCAGCATTCCGGTGATAG...ATTGAATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp GTGAGTTATCTAGTTACAGCTGAAGTAGTTTCTCTGAAACAAGTTTCCTACTTCAGATTTTGTACCTCTTaGCTTCCACCGATAAGAACA +
Preference number: 4 (lower is better)
Translates to: VSYLVTAEVVSLKQVSYFRFCTS*LPPIRT
Trigger: TGTTCTTATCGGTGGAAGCCAAGAGGTACAAAATCT...GAAGTAGGAAACTTGTTTCAGAGAAACTACTTCAGCTGTAACTAGATAACTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR CAA 72 bp GATGAGCTGACAGATCAGAATCTTGAACATGCTAGCTaGTCTCTATTACAACAGTTGTATTGTAACTTTGGA +
Preference number: 4 (lower is better)
Translates to: DELTDQNLEHAS*SLLQQLYCNFG
Trigger: TCCAAAGTTACAATACAACTGTTGTAATAGAGACAAGCTAGCATGTTCAAGATTCTGATCTGTCAGCTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CCA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATGTCATATCGGATTTTTaGAGAAACAACTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KGGLHLSFSEECEADAHDVISDF*RNNSFS
Trigger: AGAAAAGGAGTTGTTTCTCCAAAAATCCGATATGAC...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
3UTR CAA 72 bp AGGACAATTACATCAGTCAATACTGTGAAGGATGTATaGATAGCAGCTTTAAAACACAATAGCTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: RTITSVNTVKDV*IAALKHNSCDL
Trigger: AAGGTCACAGCTATTGTGTTTTAAAGCTGCTATCAATACATCCTTCACAGTATTGACTGATGTAATTGTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS CCA 90 bp GGAGGTGGATTCCTGTTGGCCCCCAAGAAGTACCTGAGTCCTCGCTaGGTGGCTGGCAGCCTCCTCCTCCCTTTGGCTCCCCTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: GGGFLLAPKKYLSPR*VAGSLLLPLAPLLR
Trigger: CCTGAGGAGGGGAGCCAAAGGGAGGAGGAGGCTGCCAGCCACCCAGCGAGGACTCAGGTACTTCTTGGGGGCCAACAGGAATCCACCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp AGGAACAGAAGGCCTCTGAGGCCGAGCCGGCTCCTCTCCCGGCACTaGTGGCAGCCCATCAGTCACCGCAGAGCTGTTTACTCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: RNRRPLRPSRLLSRH*WQPISHRRAVYSRW
Trigger: CCACCGAGAGTAAACAGCTCTGCGGTGACTGATGGGCTGCCATCAGTGCCGGGAGAGGAGCCGGCTCGGCCTCAGAGGCCTTCTGTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCGTCCACAAGGCCACCTaGGCTCCAGGAGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCVHKAT*APGVSR
Trigger: CCGGGACACTCCTGGAGCCAAGGTGGCCTTGTGGAC...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 90 bp GAGAGTTCTGAGGAGGTGGATTCCTGTTGGCCCCCAAGAAGTACCTaGGTCCTCGCTGGGTGGCTGGCAGCCTCCTCCTCCCTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: ESSEEVDSCWPPRST*VLAGWLAASSSLWL
Trigger: GAGCCAAAGGGAGGAGGAGGCTGCCAGCCACCCAGCGAGGACTCAGGTACTTCTTGGGGGCCAACAGGAATCCACCTCCTCAGAACTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp CCGGAAGGTCCTTTGGCTTTGGGAGATCGTCCACCATGGGGAGGATaGCCGGCTGTTCAGCATGGTTCCTTCTGTCCTCCGCTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: PEGPLALGDRPPWGG*PAVQHGSFCPPLGE
Trigger: TTCCCCAAGCGGAGGACAGAAGGAACCATGCTGAACAGCCGGCCATCCTCCCCATGGTGGACGATCTCCCAAAGCCAAAGGACCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp GGGTGGAATCCGGAAGGTCCTTTGGCTTTGGGAGATCGTCCACCATaGGGAGGATGGCCGGCTGTTCAGCATGGTTCCTTCTGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: GWNPEGPLALGDRPP*GGWPAVQHGSFCPP
Trigger: CGGAGGACAGAAGGAACCATGCTGAACAGCCGGCCATCCTCCCCATGGTGGACGATCTCCCAAAGCCAAAGGACCTTCCGGATTCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCTCTGTGGCCTGTGCCTaGTGGATTCCTCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCSVACA*WIPPLE
Trigger: CTCCAGAGGAGGAATCCACAAGGCACAGGCCACAGA...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 90 bp CCAGGTCAGTTCTGCTCTCAGACCTTTCGCAGGCCAGGCCAGGCATaGTGGAGGTGTCGGGAAACAGGAGAGACTGTGACCCTCGTAACT +
Preference number: 5 (lower is better)
Translates to: PGQFCSQTFRRPGQA*WRCRETGETVTLVT
Trigger: AGTTACGAGGGTCACAGTCTCTCCTGTTTCCCGACACCTCCAGCATGCCTGGCCTGGCCTGCGAAAGGTCTGAGAGCAGAACTGACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp CTCCTCCCTTTGGCTCCCCTCCTCAGGAGGGCCCCAGGGAGTCTGTaGGTCCTTCTCAGGTTTCTCCTGGTCATCTTTGAAGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: LLPLAPLLRRAPGSL*VLLRFLLVIFEGRL
Trigger: CAGTCTTCCTTCAAAGATGACCAGGAGAAACCTGAGAAGGACCCACAGACTCCCTGGGGCCCTCCTGAGGAGGGGAGCCAAAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGCCGACCGTGTCTTTTTaGGGCATCTCAGTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQPTVSF*GISVVS
Trigger: GGAAACCACTGAGATGCCCAAAAAAGACACGGTCGG...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp GCTAGCTTCACAGTTCTGTGGCCTGTGCCTTGTGGATTCCTCCTCTaGAGGCAGCGGCAGAATCCCAGGCAGATTACTCGTGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: ASFTVLWPVPCGFLL*RQRQNPRQITRENS
Trigger: GCTGTTCTCACGAGTAATCTGCCTGGGATTCTGCCGCTGCCTCCAGAGGAGGAATCCACAAGGCACAGGCCACAGAACTGTGAAGCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp TCTCCCTTGACTTGGAAGAGCCATGGTGACCAGGCGAGACCTCACTaGACAGAACATCCTCCTGCGAACTGTCATCCTCATAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: SPLTWKSHGDQARPH*TEHPPANCHPHRWG
Trigger: GCCCCATCTATGAGGATGACAGTTCGCAGGAGGATGTTCTGTCCAGTGAGGTCTCGCCTGGTCACCATGGCTCTTCCAAGTCAAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp AAAGCTTTCTTTTGGCTGCCGGTCGCTCTCTCCTGTTTTGGCCTCTaGGGTGGAATCCGGAAGGTCCTTTGGCTTTGGGAGATCGTCCAC +
Preference number: 5 (lower is better)
Translates to: KAFFWLPVALSCFGL*GGIRKVLWLWEIVH
Trigger: GTGGACGATCTCCCAAAGCCAAAGGACCTTCCGGATTCCACCCCAGAGGCCAAAACAGGAGAGAGCGACCGGCAGCCAAAAGAAAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp CTTCTCCTTGAATCCGTCTGGTCAGCAGATGCCTCAGAACACTGCTaGCATGATCGGTTAACTGACACCGGTGCCCCAGCAACTGTTCCG +
Preference number: 5 (lower is better)
Translates to: LLLESVWSADASEHC*HDRLTDTGAPATVP
Trigger: CGGAACAGTTGCTGGGGCACCGGTGTCAGTTAACCGATCATGCCAGCAGTGTTCTGAGGCATCTGCTGACCAGACGGATTCAAGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGGTACCTGTCCTCCTCTaGAAGGGGTTCCTCATACAA +
Preference number: 5 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVVPVLL*KGFLIQ
Trigger: TTGTATGAGGAACCCCTTCAAGAGGAGGACAGGTAC...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCCACACACTTCTGACCTaGGAAATGGGGCTTCTCATA +
Preference number: 5 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCHTLLT*EMGLLI
Trigger: TATGAGAAGCCCCATTTCCAAGGTCAGAAGTGTGTG...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 90 bp GGACACTGGTTCCTGAAGGGTGCCACCAAATCTGGTCCCCGTCTCTaGGGAGTGAGTCCTGGAAGTCTGCAAGTACTGATGATAGGCACT +
Preference number: 5 (lower is better)
Translates to: GHWFLKGATKSGPRL*GVSPGSLQVLMIGT
Trigger: AGTGCCTATCATCAGTACTTGCAGACTTCCAGGACTCACTCCTCAGAGACGGGGACCAGATTTGGTGGCACCCTTCAGGAACCAGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp CATGGTCCTGAACACGGAAATACTTGGACACTGGTTCCTGAAGGGTaGCACCAAATCTGGTCCCCGTCTCTGAGGAGTGAGTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: HGPEHGNTWTLVPEG*HQIWSPSLRSESWK
Trigger: CTTCCAGGACTCACTCCTCAGAGACGGGGACCAGATTTGGTGGCACCCTTCAGGAACCAGTGTCCAAGTATTTCCGTGTTCAGGACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp GCTCTTCTCCTTGAATCCGTCTGGTCAGCAGATGCCTCAGAACACTaGTGGCATGATCGGTTAACTGACACCGGTGCCCCAGCAACTGTT +
Preference number: 5 (lower is better)
Translates to: ALLLESVWSADASEH*WHDRLTDTGAPATV
Trigger: AACAGTTGCTGGGGCACCGGTGTCAGTTAACCGATCATGCCAGCAGTGTTCTGAGGCATCTGCTGACCAGACGGATTCAAGGAGAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp GGAGGGATAAGACAGAAGAGGGCTGGTTTGCACTCTCCCTTGACTTaGAAGAGCCATGGTGACCAGGCGAGACCTCACTGGACAGAACAT +
Preference number: 5 (lower is better)
Translates to: GGIRQKRAGLHSPLT*KSHGDQARPHWTEH
Trigger: ATGTTCTGTCCAGTGAGGTCTCGCCTGGTCACCATGGCTCTTCCAAGTCAAGGGAGAGTGCAAACCAGCCCTCTTCTGTCTTATCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp CATACGGACTCAGTCTGCCTGCATGGTCCTGAACACGGAAATACTTaGACACTGGTTCCTGAAGGGTGCCACCAAATCTGGTCCCCGTCT +
Preference number: 5 (lower is better)
Translates to: HTDSVCLHGPEHGNT*TLVPEGCHQIWSPS
Trigger: AGACGGGGACCAGATTTGGTGGCACCCTTCAGGAACCAGTGTCCAAGTATTTCCGTGTTCAGGACCATGCAGGCAGACTGAGTCCGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp GGACAGATCGGTGTATGTAGATGGGGCTGCACCCAGGGTCAGTCTTaGGGCACAGCTCTATCACCGGAATGCTGCAATCCTTTAAGACAC +
Preference number: 5 (lower is better)
Translates to: GQIGVCRWGCTQGQS*GTALSPECCNPLRH
Trigger: GTGTCTTAAAGGATTGCAGCATTCCGGTGATAGAGCTGTGCCCCAAGACTGACCCTGGGTGCAGCCCCATCTACATACACCGATCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp CCCACTGTAGGGAGAGATGCAGACAGACATTGTCCGTGCATCTGCTaGGTTCCCAGTGACTGTCAAGTATTCATCCTGGGCTCGGTTCCT +
Preference number: 5 (lower is better)
Translates to: PTVGRDADRHCPCIC*VPSDCQVFILGSVP
Trigger: AGGAACCGAGCCCAGGATGAATACTTGACAGTCACTGGGAACCCAGCAGATGCACGGACAATGTCTGTCTGCATCTCTCCCTACAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS-3UTR CAA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGTCCTTTAAGACACGTTaGATAGAGCCCAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQSFKTR*IEPRTK
Trigger: CTTTGTCCTGGGCTCTATCAAACGTGTCTTAAAGGA...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTCACGTGAATGGATCTaGTCTCGCTGCCAAAGCCGA +
Preference number: 5 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSASREWI*SRCQSR
Trigger: TCGGCTTTGGCAGCGAGACAAGATCCATTCACGTGA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCGCTTTACTGAATGCTTaGAGCAAGTGTGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCALLNA*SKCVGS
Trigger: TGAGCCTACACACTTGCTCAAAGCATTCAGTAAAGC...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp CTTCCCACTGTAGGGAGAGATGCAGACAGACATTGTCCGTGCATCTaGTGGGTTCCCAGTGACTGTCAAGTATTCATCCTGGGCTCGGTT +
Preference number: 5 (lower is better)
Translates to: LPTVGRDADRHCPCI*WVPSDCQVFILGSV
Trigger: AACCGAGCCCAGGATGAATACTTGACAGTCACTGGGAACCCAGCAGATGCACGGACAATGTCTGTCTGCATCTCTCCCTACAGTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS GCA 90 bp AGTGTCCTTCCCACTGTAGGGAGAGATGCAGACAGACATTGTCCGTaGATCTGCTGGGTTCCCAGTGACTGTCAAGTATTCATCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SVLPTVGRDADRHCP*ICWVPSDCQVFILG
Trigger: GCCCAGGATGAATACTTGACAGTCACTGGGAACCCAGCAGATGCACGGACAATGTCTGTCTGCATCTCTCCCTACAGTGGGAAGGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS-3UTR CAA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGGCTCTGTTGTTCCATTaGACTCTTCAGTGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQALLFH*TLQCLF
Trigger: AAAGAGACACTGAAGAGTCAAATGGAACAACAGAGC...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCGAGACAAAGGCTAAGTaGGACTCTTCCTTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCETKAK*DSSFSS
Trigger: AGAAGAAAAGGAAGAGTCCAACTTAGCCTTTGTCTC...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTACCTTCTGTCCTCCGCTaGGGGAATCTTCACTGCTTC +
Preference number: 5 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVPSVLR*GNLHCF
Trigger: GAAGCAGTGAAGATTCCCCAAGCGGAGGACAGAAGG...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTCCCACACCTTCTTCTaGACACTCGTTAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSASHTFF*TLVRVR
Trigger: TCTCACCCTAACGAGTGTCAAGAAGAAGGTGTGGGA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp TTCTTCAAAAACATAGTCGATGGGCTGGAGTGCTCTGATTCTAGCTaGTGGGCAGCCGCAGGAAGTGAGGTCAACGTAGAGGCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FFKNIVDGLECSDSS*WAAAGSEVNVEALF
Trigger: GAAGAGGGCCTCTACGTTGACCTCACTTCCTGCGGCTGCCCATCAGCTAGAATCAGAGCACTCCAGCCCATCGACTATGTTTTTGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 90 bp ATGTCCCTGGAGAGCCATAATGCAGGCGTGATTGACAGTCCGCCTTaGTGGGTTATCTACAGCTGGCTTGTCACCACACTTATGCTCTGG +
Preference number: 5 (lower is better)
Translates to: MSLESHNAGVIDSPP*WVIYSWLVTTLMLW
Trigger: CCAGAGCATAAGTGTGGTGACAAGCCAGCTGTAGATAACCCATCAAGGCGGACTGTCAATCACGCCTGCATTATGGCTCTCCAGGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp TCTGAGTCTGTCACAGCATGTCCCTGGAGAGCCATAATGCAGGCGTaGTTGACAGTCCGCCTTGATGGGTTATCTACAGCTGGCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SESVTACPWRAIMQA*LTVRLDGLSTAGLS
Trigger: TGACAAGCCAGCTGTAGATAACCCATCAAGGCGGACTGTCAATCACGCCTGCATTATGGCTCTCCAGGGACATGCTGTGACAGACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp ACGGTGGCTCCGGTGGCTCCGTTTCTTTGGGTAAGGACTCAATTCTaGCTTCGGGAGTTCTTACATGACTTAAAGTTGTGGGCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: TVAPVAPFLWVRTQF*LREFLHDLKLWAPC
Trigger: GCAGGGAGCCCACAACTTTAAGTCATGTAAGAACTCCCGAAGTCAGAATTGAGTCCTTACCCAAAGAAACGGAGCCACCGGAGCCACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 90 bp CACCCAGTTTACCTTCTTTTTCAAAATGATGGACCAGGTCAGTTCTaGTCTCAGACCTTTCGCAGGCCAGGCCAGGCATGCTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: HPVYLLFQNDGPGQF*SQTFRRPGQACWRC
Trigger: ACACCTCCAGCATGCCTGGCCTGGCCTGCGAAAGGTCTGAGAGCAGAACTGACCTGGTCCATCATTTTGAAAAAGAAGGTAAACTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp TTGGTAATACAGGAGGAGCCAGCAGCCACGGAGAACCTTAAAGGATaGCGGCGTGAACGAGGTCAGGTCGGCACATTCTTTTACGAAATC +
Preference number: 5 (lower is better)
Translates to: LVIQEEPAATENLKG*RRERGQVGTFFYEI
Trigger: GATTTCGTAAAAGAATGTGCCGACCTGACCTCGTTCACGCCGGCATCCTTTAAGGTTCTCCGTGGCTGCTGGCTCCTCCTGTATTACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp TGCACTGAGGAACATCTCTGGGTTCTGCCTGAGAAACAGAGGGTGTaGACAAGGCTTTTCGTCTTCCAGAACTCGACTCAACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: CTEEHLWVLPEKQRV*TRLFVFQNSTQQGS
Trigger: GCTTCCCTGTTGAGTCGAGTTCTGGAAGACGAAAAGCCTTGTCCACACCCTCTGTTTCTCAGGCAGAACCCAGAGATGTTCCTCAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GGTGCGGTGCGGTGCAGTAGTGTGAACACAGCGGCCTCCTTCTCATGCACACAGACAGACATTATTTTCTaGAGCCTTACTACTGTGTCC +
Preference number: 5 (lower is better)
Translates to: GAVRCSSVNTAASFSCTQTDIIF*SLTTVS
Trigger: GGACACAGTAGTAAGGCTCAAGAAAATAATGTCTGT...CTGTGTGCATGAGAAGGAGGCCGCTGTGTTCACACTACTGCACCGCACCGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGTCCAGATTTCTCCTCTaGTCATATACTACAGGGACA +
Preference number: 5 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVSRFLL*SYTTGT
Trigger: TGTCCCTGTAGTATATGACAAGAGGAGAAATCTGGA...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCAAAGGAAGAACTGTCTaGTTCGTCTTGAGAGACAAA +
Preference number: 5 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCKGRTV*FVLRDK
Trigger: TTTGTCTCTCAAGACGAACAAGACAGTTCTTCCTTT...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAAGATGCAGACAGACATaGTCCGTGCATCTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVRCRQT*SVHLLG
Trigger: ACCCAGCAGATGCACGGACAATGTCTGTCTGCATCT...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TCGTCACCGCTGGGGAGAAAGTTCTTTCTGGGTGCGGTGCGGTGCAGTAGTGTGTTCCGCAACTGTTACTaGAGAAGAGGAAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: SSPLGRKFFLGAVRCSSVFRNCY*RRGNVA
Trigger: TGCAACATTTCCTCTTCTCAAGTAACAGTTGCGGAA...CACACTACTGCACCGCACCGCACCCAGAAAGAACTTTCTCCCCAGCGGTGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCAAAATCTGGGCACTCTaGATAGGGAACAATTTCTCT +
Preference number: 5 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCKIWAL*IGNNFS
Trigger: AGAGAAATTGTTCCCTATCAAGAGTGCCCAGATTTT...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTGAACACAGCGGCCTCCTTCTCATGCACACAGCACGTGAGTGGGTGGAGGTGCCCCTTCAGCACGTTTTaGATAAAAACTTTCCATCTC +
Preference number: 5 (lower is better)
Translates to: VNTAASFSCTQHVSGWRCPFSTF*IKTFHL
Trigger: GAGATGGAAAGTTTTTATCAAAAACGTGCTGAAGGG...GCACCTCCACCCACTCACGTGCTGTGTGCATGAGAAGGAGGCCGCTGTGTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCCCCCACACCATCGCTTaGGTAGAAAATTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAPHTIA*VENFHF
Trigger: GAAGTGGAAATTTTCTACCAAAGCGATGGTGTGGGG...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp CCTCACTGGACAGAACATCCTCCTGCGAACTGTCATCCTCATAGATaGGGCTCAGGGCTAAGGGATAGATTTTGTACCTCTTGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: PHWTEHPPANCHPHR*GSGLRDRFCTSWLP
Trigger: TGGAAGCCAAGAGGTACAAAATCTATCCCTTAGCCCTGAGCCCCATCTATGAGGATGACAGTTCGCAGGAGGATGTTCTGTCCAGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp GAAGGGTGCCACCAAATCTGGTCCCCGTCTCTGAGGAGTGAGTCCTaGAAGTCTGCAAGTACTGATGATAGGCACTCTTCAGAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: EGCHQIWSPSLRSES*KSASTDDRHSSEKN
Trigger: ATTCTTCTCTGAAGAGTGCCTATCATCAGTACTTGCAGACTTCCAGGACTCACTCCTCAGAGACGGGGACCAGATTTGGTGGCACCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp GTCCGTGCATCTGCTGGGTTCCCAGTGACTGTCAAGTATTCATCCTaGGCTCGGTTCCTTATTCTGATGTACACTGCAGGCTGCTTCATA +
Preference number: 5 (lower is better)
Translates to: VRASAGFPVTVKYSS*ARFLILMYTAGCFI
Trigger: TATGAAGCAGCCTGCAGTGTACATCAGAATAAGGAACCGAGCCCAGGATGAATACTTGACAGTCACTGGGAACCCAGCAGATGCACGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 90 bp AGGCTTCCTTTTCTAAACCCAGGAGAGAAGGCACAGTCAGTGAGCTaGAGCCCTCAGGTGCAAACACATTTTTCTCCAGATGGGCATCAG +
Preference number: 5 (lower is better)
Translates to: RLPFLNPGEKAQSVS*SPQVQTHFSPDGHQ
Trigger: CTGATGCCCATCTGGAGAAAAATGTGTTTGCACCTGAGGGCTCCAGCTCACTGACTGTGCCTTCTCTCCTGGGTTTAGAAAAGGAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp TTGATAGAGCCCAGGACAAAGTTCCTTTCTGGGTGCTTCCTGTTCTaGAGAAGCCAGTCCCGGTCTAACACTCTTTCCCCTTCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: LIEPRTKFLSGCFLF*RSQSRSNTLSPSSN
Trigger: GTTGGAAGAAGGGGAAAGAGTGTTAGACCGGGACTGGCTTCTTCAGAACAGGAAGCACCCAGAAAGGAACTTTGTCCTGGGCTCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp TATTCATCCTGGGCTCGGTTCCTTATTCTGATGTACACTGCAGGCTaGTTCATAGGACGCACAGAGCCGATTGTCTTCCACCCACTGAAT +
Preference number: 5 (lower is better)
Translates to: YSSWARFLILMYTAG*FIGRTEPIVFHPLN
Trigger: ATTCAGTGGGTGGAAGACAATCGGCTCTGTGCGTCCTATGAAGCAGCCTGCAGTGTACATCAGAATAAGGAACCGAGCCCAGGATGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 90 bp CTTCTGAGTAAAAGTGGGTCACGTGCTCTTCTCCTTGAATCCGTCTaGTCAGCAGATGCCTCAGAACACTGCTGGCATGATCGGTTAACT +
Preference number: 5 (lower is better)
Translates to: LLSKSGSRALLLESV*SADASEHCWHDRLT
Trigger: AGTTAACCGATCATGCCAGCAGTGTTCTGAGGCATCTGCTGACCAGACGGATTCAAGGAGAAGAGCACGTGACCCACTTTTACTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATGTCCACAAGGCCACCTaGGCTCCAGGAGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: KGGLHLSFSEECEADAHDVHKAT*APGVSR
Trigger: CCGGGACACTCCTGGAGCCAAGGTGGCCTTGTGGAC...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTAGGGCCTTGGCTACTTTaGCTTCCTCTAAACACTGAT +
Preference number: 5 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVGPWLL*LPLNTD
Trigger: ATCAGTGTTTAGAGGAAGCAAAAGTAGCCAAGGCCC...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp TGTGCCTGGGGACTTGAGTCAGAGCTTCCATCTTCTCCGTCTAAGTaGTTCATAGTCTCCAACACAGGCTGTTGCTGCAAATACTTCCTG +
Preference number: 5 (lower is better)
Translates to: CAWGLESELPSSPSK*FIVSNTGCCCKYFL
Trigger: CAGGAAGTATTTGCAGCAACAGCCTGTGTTGGAGACTATGAATCACTTAGACGGAGAAGATGGAAGCTCTGACTCAAGTCCCCAGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp GCAGAGCTGTTTACTCTCGGTGGACTGTCGGTTGGAGTTTTCCTCTaGAATTCTGGACAAGGGCCTTGGCTACTTTTGCTTCCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: AELFTLGGLSVGVFL*NSGQGPWLLLLPLN
Trigger: GTTTAGAGGAAGCAAAAGTAGCCAAGGCCCTTGTCCAGAATTTCAGAGGAAAACTCCAACCGACAGTCCACCGAGAGTAAACAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 90 bp CAGAGTTTGTTTGTCAACGTTCTCCACATACGGACTCAGTCTGCCTaGATGGTCCTGAACACGGAAATACTTGGACACTGGTTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: QSLFVNVLHIRTQSA*MVLNTEILGHWFLK
Trigger: CTTCAGGAACCAGTGTCCAAGTATTTCCGTGTTCAGGACCATGCAGGCAGACTGAGTCCGTATGTGGAGAACGTTGACAAACAAACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp CTGCTTCATAGGACGCACAGAGCCGATTGTCTTCCACCCACTGAATaGTGTCCAATTTGGAATCTCCTTAGGCGTAAGAAGGATTTGCCT +
Preference number: 5 (lower is better)
Translates to: LLHRTHRADCLPPTE*CPIWNLLRRKKDLP
Trigger: AGGCAAATCCTTCTTACGCCTAAGGAGATTCCAAATTGGACAGCATTCAGTGGGTGGAAGACAATCGGCTCTGTGCGTCCTATGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 90 bp TGTTCCGGTCTCTGCTTTCATGAGATTGTCAAAGTAGGCAGTGGTTaGGGAATCAAGACATGCCTTCCTAGTATGAGTGCCCACACATCC +
Preference number: 5 (lower is better)
Translates to: CSGLCFHEIVKVGSG*GIKTCLPSMSAHTS
Trigger: GGATGTGTGGGCACTCATACTAGGAAGGCATGTCTTGATTCCCCAACCACTGCCTACTTTGACAATCTCATGAAAGCAGAGACCGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCCTCTTCAGTGTCTCTTaGGATTCGTTTTTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSALFSVS*DSFFQD
Trigger: ATCTTGGAAAAACGAATCCAAAGAGACACTGAAGAG...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTGTACCTGTCCTCCTCTaGAAGGGGTTCCTCATACAA +
Preference number: 5 (lower is better)
Translates to: SEECEADAHDRRRGGIRGVPVLL*KGFLIQ
Trigger: TTGTATGAGGAACCCCTTCAAGAGGAGGACAGGTAC...ACCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCTTTGTACTTTCCATTTaGGTAGTGTCACTCCCATCA +
Preference number: 5 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAFVLSI*VVSLPS
Trigger: TGATGGGAGTGACACTACCAAAATGGAAAGTACAAA...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp GACTGTGACCCTCGTAACTCTGCAGAGGTGTACCTGTCCTCCTCTTaGAGGGGTTCCTCATACAATATGGTAAAGGAAGAACTGTCTTGT +
Preference number: 5 (lower is better)
Translates to: DCDPRNSAEVYLSSS*RGSSYNMVKEELSC
Trigger: ACAAGACAGTTCTTCCTTTACCATATTGTATGAGGAACCCCTTCAAGAGGAGGACAGGTACACCTCTGCAGAGTTACGAGGGTCACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 90 bp TTGTCTCCATCAAATGCCTCACCCAGTTTACCTTCTTTTTCAAAATaGTGGACCAGGTCAGTTCTGCTCTCAGACCTTTCGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LSPSNASPSLPSFSK*WTRSVLLSDLSQAR
Trigger: CCTGGCCTGCGAAAGGTCTGAGAGCAGAACTGACCTGGTCCATCATTTTGAAAAAGAAGGTAAACTGGGTGAGGCATTTGATGGAGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 90 bp TTGGCATTTTTCACCATGAGGAAGAAATTCCTTGGATTCAAGGGTTaGGGACGCATGTCCAAGGTAAAGCGCAGGAGGATTCTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LAFFTMRKKFLGFKG*GRMSKVKRRRILPV
Trigger: GACAGGGAGAATCCTCCTGCGCTTTACCTTGGACATGCGTCCTCAACCCTTGAATCCAAGGAATTTCTTCCTCATGGTGAAAAATGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp CTTGGGAGATCATGTGAATTTACAGCTGTGCTCTCTCCCTTAGTGTaGCAAAAGGAGGGAGATGTGTTACCAGTACCAGCGCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LGRSCEFTAVLSPLV*QKEGDVLPVPALWK
Trigger: TTTCCAGAGCGCTGGTACTGGTAACACATCTCCCTCCTTTTGTCACACTAAGGGAGAGAGCACAGCTGTAAATTCACATGATCTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 90 bp ACTTCAGAGTTTGTTTGTCAACGTTCTCCACATACGGACTCAGTCTaGCTGCATGGTCCTGAACACGGAAATACTTGGACACTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: TSEFVCQRSPHTDSV*LHGPEHGNTWTLVP
Trigger: AGGAACCAGTGTCCAAGTATTTCCGTGTTCAGGACCATGCAGGCAGACTGAGTCCGTATGTGGAGAACGTTGACAAACAAACTCTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp GGGCTTCTCATACAGAATCCAGCAGCCCCTTACAACTTTTATCAGTaGCCCATTCGGGAAAGACCATGTTGTAGCATCAGGGATGTTACA +
Preference number: 5 (lower is better)
Translates to: GLLIQNPAAPYNFYQ*PIRERPCCSIRDVT
Trigger: TGTAACATCCCTGATGCTACAACATGGTCTTTCCCGAATGGGGCACTGATAAAAGTTGTAAGGGGCTGCTGGATTCTGTATGAGAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp TACTTGAGAAGAGGAAATGTTGCACTGAGGAACATCTCTGGGTTCTaGCTGAGAAACAGAGGGTGTGGACAAGGCTTTTCGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: YLRRGNVALRNISGF*LRNRGCGQGFSSSR
Trigger: TCTGGAAGACGAAAAGCCTTGTCCACACCCTCTGTTTCTCAGGCAGAACCCAGAGATGTTCCTCAGTGCAACATTTCCTCTTCTCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp AGAACTTCTGGTGGTAGGCAACCCACACTCCACTCTTCACGTGAATaGATCTTGTCTCGCTGCCAAAGCCGATTTCTTCTAAGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: RTSGGRQPTLHSSRE*ILSRCQSRFLLSQK
Trigger: TTTCTGACTTAGAAGAAATCGGCTTTGGCAGCGAGACAAGATCCATTCACGTGAAGAGTGGAGTGTGGGTTGCCTACCACCAGAAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp CAACTGTTACTTGAGAAGAGGAAATGTTGCACTGAGGAACATCTCTaGGTTCTGCCTGAGAAACAGAGGGTGTGGACAAGGCTTTTCGTC +
Preference number: 5 (lower is better)
Translates to: QLLLEKRKCCTEEHL*VLPEKQRVWTRLFV
Trigger: GACGAAAAGCCTTGTCCACACCCTCTGTTTCTCAGGCAGAACCCAGAGATGTTCCTCAGTGCAACATTTCCTCTTCTCAAGTAACAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp GGTGCCACCTCGGTCTTTACGATAGCTCCCTCAGCATCTTTTAGATaGACAGTTTTCAATTCTGACATAGCAGGCATCACCTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: GATSVFTIAPSASFR*TVFNSDIAGITSAL
Trigger: CAAAGCTGAGGTGATGCCTGCTATGTCAGAATTGAAAACTGTCCATCTAAAAGATGCTGAGGGAGCTATCGTAAAGACCGAGGTGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTATCATCTTTCCAGGCCTaGGATTACACTTCAGAGTTT +
Preference number: 5 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVSSFQA*DYTSEF
Trigger: AAACTCTGAAGTGTAATCCAAGGCCTGGAAAGATGA...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCTCACGTGAATGGATCTaGTCTCGCTGCCAAAGCCGA +
Preference number: 5 (lower is better)
Translates to: LRTKALKIFIGARYDAVCSREWI*SRCQSR
Trigger: TCGGCTTTGGCAGCGAGACAAGATCCATTCACGTGA...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCGCTTTACTGAATGCTTaGAGCAAGTGTGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCALLNA*SKCVGS
Trigger: TGAGCCTACACACTTGCTCAAAGCATTCAGTAAAGC...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCATCGATACACTCTCCTaGGAAGCCTGCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCIDTLS*EACFTE
Trigger: TTCAGTAAAGCAGGCTTCCAAGGAGAGTGTATCGAT...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCATAGAAACCGTCTTCTaGGTAATACAGGAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCIETVF*VIQEEP
Trigger: TGGCTCCTCCTGTATTACCAAGAAGACGGTTTCTAT...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTTCCTCTTCCTCTTCCTaGTCCCGAGAAGGGTTCCGC +
Preference number: 5 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLASSSSS*SREGFR
Trigger: GCGGAACCCTTCTCGGGACAAGGAAGAGGAAGAGGA...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACATGTGCCTGGGGACTaGAGTCAGAGCTTCCATCTT +
Preference number: 5 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTHVPGD*SQSFHL
Trigger: AAGATGGAAGCTCTGACTCAAGTCCCCAGGCACATG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TTTCCTGTGCCTGGTTCACACAGGCGTGGAGCAGGACACTCACTAATGCTTGTATCGGTTGGTATTTATTaGGCTATAACCAGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: FPVPGSHRRGAGHSLMLVSVGIY*AITRGF
Trigger: GAAGCCTCTGGTTATAGCCAAATAAATACCAACCGA...TACAAGCATTAGTGAGTGTCCTGCTCCACGCCTGTGTGAACCAGGCACAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GGGAGAAGGCTGTTGACCTGTACGTGTGCAGGTACTGTGTGTACTGGTAGTGCCCCTTATCAAATTTTCTaGGGCTGCATAAATAACCTC +
Preference number: 5 (lower is better)
Translates to: GRRLLTCTCAGTVCTGSAPYQIF*GCINNL
Trigger: GAGGTTATTTATGCAGCCCAAGAAAATTTGATAAGG...GGCACTACCAGTACACACAGTACCTGCACACGTACAGGTCAACAGCCTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCTCTAATGTCTCCAACTaGACACTAGCAGACTGTCCA +
Preference number: 5 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCSNVSN*TLADCP
Trigger: TGGACAGTCTGCTAGTGTCAAGTTGGAGACATTAGA...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp CAACTTAGAAGTCATATCGGATTTTTGGAGAAACAACTCCTTTTCTaGCCACCGGCCATGCTGCAGACTGGAGGTCGTTGGTTCACTGAA +
Preference number: 5 (lower is better)
Translates to: QLRSHIGFLEKQLLF*PPAMLQTGGRWFTE
Trigger: TTCAGTGAACCAACGACCTCCAGTCTGCAGCATGGCCGGTGGTCAGAAAAGGAGTTGTTTCTCCAAAAATCCGATATGACTTCTAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp CTTCTAATGGACCTCCAAGCAAATATCCTTTTGTGGCTACGTCTTTaGTGTCTGTTGACAATGGGACCGTCACAGTGTCCCTTATGCTTC +
Preference number: 5 (lower is better)
Translates to: LLMDLQANILLWLRL*CLLTMGPSQCPLCF
Trigger: GAAGCATAAGGGACACTGTGACGGTCCCATTGTCAACAGACAGCAAAGACGTAGCCACAAAAGGATATTTGCTTGGAGGTCCATTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp GAGGTCAGGTCGGCACATTCTTTTACGAAATCGATACACTCTCCTTaGAAGCCTGCTTTACTGAATGCTTTGAGCAAGTGTGTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: EVRSAHSFTKSIHSP*KPALLNALSKCVGS
Trigger: TGAGCCTACACACTTGCTCAAAGCATTCAGTAAAGCAGGCTTCCAAGGAGAGTGTATCGATTTCGTAAAAGAATGTGCCGACCTGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp ACGCACAGAGCCGATTGTCTTCCACCCACTGAATGCTGTCCAATTTaGAATCTCCTTAGGCGTAAGAAGGATTTGCCTTCCCAAGAAATT +
Preference number: 5 (lower is better)
Translates to: THRADCLPPTECCPI*NLLRRKKDLPSQEI
Trigger: AATTTCTTGGGAAGGCAAATCCTTCTTACGCCTAAGGAGATTCCAAATTGGACAGCATTCAGTGGGTGGAAGACAATCGGCTCTGTGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 90 bp CAATATCCTGCAGTCCTGGGACGCTTTCCTGATGGCTTTCTCGGTTaGTATTTATTTGGCTATAACCAGAGGCTTCTAATGGACCTCCAA +
Preference number: 5 (lower is better)
Translates to: QYPAVLGRFPDGFLG*YLFGYNQRLLMDLQ
Trigger: TTGGAGGTCCATTAGAAGCCTCTGGTTATAGCCAAATAAATACCAACCGAGAAAGCCATCAGGAAAGCGTCCCAGGACTGCAGGATATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp GATGGGATAGCTTCTTTCACAGTACCTGGATTCATTACATCCTCTTaGGCTAGATGCTCCTGGCAGGTACCAACCGTGTGTTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: DGIASFTVPGFITSS*ARCSWQVPTVCLDF
Trigger: AAAATCCAAACACACGGTTGGTACCTGCCAGGAGCATCTAGCCCAAGAGGATGTAATGAATCCAGGTACTGTGAAAGAAGCTATCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCCACTTCAGAGTTTGTTaGTCAACGTTCTCCACATAC +
Preference number: 5 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCHFRVC*STFSTY
Trigger: GTATGTGGAGAACGTTGACAAACAAACTCTGAAGTG...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTATAGAAACCGTCTTCTaGGTAATACAGGAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: SEECEADAHDRRRGGIRGIETVF*VIQEEP
Trigger: TGGCTCCTCCTGTATTACCAAGAAGACGGTTTCTAT...ACCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS TCA 90 bp CAAGATGTAGTTCTCTTCCCTCACAATGTTCCAGAGCAAAAAGGCTaGTGGAAGGTTCTTCAAAAACATAGTCGATGGGCTGGAGTGCTC +
Preference number: 5 (lower is better)
Translates to: QDVVLFPHNVPEQKG*WKVLQKHSRWAGVL
Trigger: GAGCACTCCAGCCCATCGACTATGTTTTTGAAGAACCTTCCATCAGCCTTTTTGCTCTGGAACATTGTGAGGGAAGAGAACTACATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 90 bp TCAGAGGTATCTCCATGCTCAAAGTTTAAAGCTACCCCAGCTAACTaGGTGCCAGCAGTTTCAGGACCTGAAGGAGATTGGCATTTTTCA +
Preference number: 5 (lower is better)
Translates to: SEVSPCSKFKATPAN*VPAVSGPEGDWHFS
Trigger: TGAAAAATGCCAATCTCCTTCAGGTCCTGAAACTGCTGGCACTCAGTTAGCTGGGGTAGCTTTAAACTTTGAGCATGGAGATACCTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp CCTGACATACTGTCCACACCTTTCTCGTCCAAACTCTCTTTCAGTTaGATCCCTGCTAACACCACTTCTGATGGGATAGCTTCTTTCACA +
Preference number: 5 (lower is better)
Translates to: PDILSTPFSSKLSFS*IPANTTSDGIASFT
Trigger: TGTGAAAGAAGCTATCCCATCAGAAGTGGTGTTAGCAGGGATTCAACTGAAAGAGAGTTTGGACGAGAAAGGTGTGGACAGTATGTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp TTGTCTCACCAACTGCAGATGAAACACTGGTCTCTTCTTCCTCTTTaGCTCCTGACATACTGTCCACACCTTTCTCGTCCAAACTCTCTT +
Preference number: 5 (lower is better)
Translates to: LSHQLQMKHWSLLPL*LLTYCPHLSRPNSL
Trigger: AAGAGAGTTTGGACGAGAAAGGTGTGGACAGTATGTCAGGAGTCAAAGAGGAAGAAGAGACCAGTGTTTCATCTGCAGTTGGTGAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 90 bp GCTTCTTTCACAGTACCTGGATTCATTACATCCTCTTGGGCTAGATaGTCCTGGCAGGTACCAACCGTGTGTTTGGATTTTAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: ASFTVPGFITSSWAR*SWQVPTVCLDFSSS
Trigger: AGAAGAACTAAAATCCAAACACACGGTTGGTACCTGCCAGGAGCATCTAGCCCAAGAGGATGTAATGAATCCAGGTACTGTGAAAGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp GAAGGCACAGGCTCTGTTGTTCCATTTGACTCTTCAGTGTCTCTTTaGATTCGTTTTTCCAAGATGTCCAAGGGAGGATATACTGTCTCC +
Preference number: 5 (lower is better)
Translates to: EGTGSVVPFDSSVSL*IRFSKMSKGGYTVS
Trigger: GGAGACAGTATATCCTCCCTTGGACATCTTGGAAAAACGAATCCAAAGAGACACTGAAGAGTCAAATGGAACAACAGAGCCTGTGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp CCTCATAGATGGGGCTCAGGGCTAAGGGATAGATTTTGTACCTCTTaGCTTCCACCGATAAGAACATCTCTGAATTGTCTCCATCAAATG +
Preference number: 5 (lower is better)
Translates to: PHRWGSGLRDRFCTS*LPPIRTSLNCLHQM
Trigger: CATTTGATGGAGACAATTCAGAGATGTTCTTATCGGTGGAAGCCAAGAGGTACAAAATCTATCCCTTAGCCCTGAGCCCCATCTATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp TATAACCAGAGGCTTCTAATGGACCTCCAAGCAAATATCCTTTTGTaGCTACGTCTTTGCTGTCTGTTGACAATGGGACCGTCACAGTGT +
Preference number: 5 (lower is better)
Translates to: YNQRLLMDLQANILL*LRLCCLLTMGPSQC
Trigger: ACACTGTGACGGTCCCATTGTCAACAGACAGCAAAGACGTAGCCACAAAAGGATATTTGCTTGGAGGTCCATTAGAAGCCTCTGGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 90 bp TTCACAGTACCTGGATTCATTACATCCTCTTGGGCTAGATGCTCCTaGCAGGTACCAACCGTGTGTTTGGATTTTAGTTCTTCTCTGACA +
Preference number: 5 (lower is better)
Translates to: FTVPGFITSSWARCS*QVPTVCLDFSSSLT
Trigger: TGTCAGAGAAGAACTAAAATCCAAACACACGGTTGGTACCTGCCAGGAGCATCTAGCCCAAGAGGATGTAATGAATCCAGGTACTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TTGAGGACCAAGGCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCAAGGCACAGGCTCTGTaGTTCCATTTGACTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LRTKALKIFIGARYDAVCKAQAL*FHLTLQ
Trigger: CTGAAGAGTCAAATGGAACAACAGAGCCTGTGCCTT...GCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGCCTTGGTCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp AGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGATCGATACACTCTCCTaGGAAGCCTGCTTTACTGAA +
Preference number: 5 (lower is better)
Translates to: RGGIRGVFQLKNVFPRVWIDTLS*EACFTE
Trigger: TTCAGTAAAGCAGGCTTCCAAGGAGAGTGTATCGAT...CCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACTCCAACACAGGCTGTaGCTGCAAATACTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTLQHRL*LQILPD
Trigger: ATCAGGAAGTATTTGCAGCAACAGCCTGTGTTGGAG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAAGGGTGTACCAACCGTGTGTTaGGATTTTAGTTCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: WPLQLDPSEERTHFLHKGVPTVC*DFSSSL
Trigger: CAGAGAAGAACTAAAATCCAAACACACGGTTGGTAC...ACCCTTGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAGTCTCTTCTTCCTCTTaGACTCCTGACATACTGTCC +
Preference number: 5 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTVSSSS*TPDILS
Trigger: GGACAGTATGTCAGGAGTCAAAGAGGAAGAAGAGAC...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp AAATCTCCTCAGTCAATGTATCAGCTCTTTTGGGTAAACCACTTCTaGGTAAAAGTGGGTCACGTGCTCTTCTCCTTGAATCCGTCTGGT +
Preference number: 5 (lower is better)
Translates to: KSPQSMYQLFWVNHF*VKVGHVLFSLNPSG
Trigger: ACCAGACGGATTCAAGGAGAAGAGCACGTGACCCACTTTTACTCAGAAGTGGTTTACCCAAAAGAGCTGATACATTGACTGAGGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 90 bp GTCGGCACATTCTTTTACGAAATCGATACACTCTCCTTGGAAGCCTaGTTTACTGAATGCTTTGAGCAAGTGTGTAGGCTCATTTATCCC +
Preference number: 5 (lower is better)
Translates to: VGTFFYEIDTLSLEA*FTECFEQVCRLIYP
Trigger: GGGATAAATGAGCCTACACACTTGCTCAAAGCATTCAGTAAAGCAGGCTTCCAAGGAGAGTGTATCGATTTCGTAAAAGAATGTGCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 90 bp AGCATCCATTTGGTATACACTTCCTCTTGCGAAAACGTTAGCCTCTaGCTCAGCTTTCATACTGTTCAATTCAGGGTCCACTTTACATGC +
Preference number: 5 (lower is better)
Translates to: SIHLVYTSSCENVSL*LSFHTVQFRVHFTC
Trigger: GCATGTAAAGTGGACCCTGAATTGAACAGTATGAAAGCTGAGCCAGAGGCTAACGTTTTCGCAAGAGGAAGTGTATACCAAATGGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp AGAGTTCACGGTCAGCGCTTAGGAAAAGACAGGTTTCAGGAAATTGGCCACTGCAGTCATATCGGATTTTaGGAGAAACAACTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: RVHGQRLGKDRFQEIGHCSHIGF*EKQLLF
Trigger: GAAAAGGAGTTGTTTCTCCAAAAATCCGATATGACT...GCAGTGGCCAATTTCCTGAAACCTGTCTTTTCCTAAGCGCTGACCGTGAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAACACACACTTCTGACCTaGGAAATGGGGCTTCTCATA +
Preference number: 5 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKHTLLT*EMGLLI
Trigger: TATGAGAAGCCCCATTTCCAAGGTCAGAAGTGTGTG...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAAGATGCAGACAGACATaGTCCGTGCATCTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: VYIYHSLKNVRQMHMIGERCRQT*SVHLLG
Trigger: ACCCAGCAGATGCACGGACAATGTCTGTCTGCATCT...TTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAGACTTTCCCGAGATGTaGAATAAGTTCCCGAGGAAC +
Preference number: 5 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKDFPEM*NKFPRN
Trigger: GTTCCTCGGGAACTTATTCAACATCTCGGGAAAGTC...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACACATCTGAGCATCCATTaGGTATACACTTCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTHLSIH*VYTSSC
Trigger: GCAAGAGGAAGTGTATACCAAATGGATGCTCAGATG...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp ATTCCCAAAGTGATGGGCAATTCCTCGGGTTTTTCAACATACATCTaGGCATCCATTTGGTATACACTTCCTCTTGCGAAAACGTTAGCC +
Preference number: 5 (lower is better)
Translates to: IPKVMGNSSGFSTYI*ASIWYTLPLAKTLA
Trigger: GGCTAACGTTTTCGCAAGAGGAAGTGTATACCAAATGGATGCTCAGATGTATGTTGAAAAACCCGAGGAATTGCCCATCACTTTGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 90 bp TTTTACGAAATCGATACACTCTCCTTGGAAGCCTGCTTTACTGAATaGTTTGAGCAAGTGTGTAGGCTCATTTATCCCGAGTGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: FYEIDTLSLEACFTE*FEQVCRLIYPEWFQ
Trigger: TTGGAACCACTCGGGATAAATGAGCCTACACACTTGCTCAAAGCATTCAGTAAAGCAGGCTTCCAAGGAGAGTGTATCGATTTCGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAGAGACAAAGGCTAAGTaGGACTCTTCCTTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTETKAK*DSSFSS
Trigger: AGAAGAAAAGGAAGAGTCCAACTTAGCCTTTGTCTC...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTAACTGGCCAAGCCTGTaGATTCTAGAAGCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLANWPSL*ILEAKV
Trigger: TACCTTGGCTTCTAGAATCAACAGGCTTGGCCAGTT...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAACTTCATTATCGTTTTaGTGCGCTTTCCCTAAGTCC +
Preference number: 5 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTTSLSF*CAFPKS
Trigger: GGACTTAGGGAAAGCGCACAAAAACGATAATGAAGT...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 90 bp GATTTCTCCTCTTGTCATATACTACAGGGACAGACATTATTTTCTTaGGCCTTACTACTGTGTCCTCCTCTTGGACATCTGGTATTGCTG +
Preference number: 5 (lower is better)
Translates to: DFSSCHILQGQTLFS*ALLLCPPLGHLVLL
Trigger: CAGCAATACCAGATGTCCAAGAGGAGGACACAGTAGTAAGGCTCAAGAAAATAATGTCTGTCCCTGTAGTATATGACAAGAGGAGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 90 bp GCTGGCTTGTCACCACACTTATGCTCTGGCAACCGTGCATCTTCATaGCTAATTGATTTATGTGGACTTGACAAATTTGTACTTTCCATT +
Preference number: 5 (lower is better)
Translates to: AGLSPHLCSGNRASS*LIDLCGLDKFVLSI
Trigger: AATGGAAAGTACAAATTTGTCAAGTCCACATAAATCAATTAGGCATGAAGATGCACGGTTGCCAGAGCATAAGTGTGGTGACAAGCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GCTTTAAAGATTTTCATTGGTGCCAGGTATGATGCTGTGTGCCTTCATCCCAGACTCTTCAGTGTCTCTTaGGATTCGTTTTTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: ALKIFIGARYDAVCLHPRLFSVS*DSFFQD
Trigger: ATCTTGGAAAAACGAATCCAAAGAGACACTGAAGAG...TCTGGGATGAAGGCACACAGCATCATACCTGGCACCAATGAAAATCTTTAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACAATTACACTTCAGAGTTaGTTTGTCAACGTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTITLQS*FVNVLH
Trigger: GTGGAGAACGTTGACAAACAAACTCTGAAGTGTAAT...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTTCCTTTAAGACACGTTaGATAGAGCCCAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLASFKTR*IEPRTK
Trigger: CTTTGTCCTGGGCTCTATCAAACGTGTCTTAAAGGA...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAATTGGCCACTGCAACTGGACCCATCGGAAGAAAGAACACATTTTCTTCACATTTCCTTTTTCTGACTaGTACTCACGGGCTCATTTT +
Preference number: 5 (lower is better)
Translates to: EIGHCNWTHRKKEHIFFTFPFSD*YSRAHF
Trigger: AAAATGAGCCCGTGAGTACAAGTCAGAAAAAGGAAA...TGTGAAGAAAATGTGTTCTTTCTTCCGATGGGTCCAGTTGCAGTGGCCAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTTTCTCCTGGTCATCTTaGAAGGAAGACTGCTTAACC +
Preference number: 5 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAFSWSS*KEDCLT
Trigger: GGTTAAGCAGTCTTCCTTCAAAGATGACCAGGAGAA...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAATTACACTTCAGAGTTaGTTTGTCAACGTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKITLQS*FVNVLH
Trigger: GTGGAGAACGTTGACAAACAAACTCTGAAGTGTAAT...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTGTTCGCTGTCTTGTGTaGAATCCAAAGAAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAVRCLV*NPKKRH
Trigger: ATGCCTTTTCTTTGGATTCAACACAAGACAGCGAAC...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp TGCCTCAAGAAGCCGAGGTCCCTCCTTGTGGGTCAGATAATTAAAGAATATAAAAATGTATCAGCTCTTTaGGGTAAACCACTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: CLKKPRSLLVGQIIKEYKNVSAL*GKPLLS
Trigger: ACTCAGAAGTGGTTTACCCAAAAGAGCTGATACATT...TTTATATTCTTTAATTATCTGACCCACAAGGAGGGACCTCGGCTTCTTGAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 90 bp TTTTTCAACATACATCTGAGCATCCATTTGGTATACACTTCCTCTTaGGAAAACGTTAGCCTCTGGCTCAGCTTTCATACTGTTCAATTC +
Preference number: 5 (lower is better)
Translates to: FFNIHLSIHLVYTSS*ENVSLWLSFHTVQF
Trigger: GAATTGAACAGTATGAAAGCTGAGCCAGAGGCTAACGTTTTCGCAAGAGGAAGTGTATACCAAATGGATGCTCAGATGTATGTTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGCTCTGTTGTTCCATTaGACTCTTCAGTGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: VYIYHSLKNVRQMHMIGEALLFH*TLQCLF
Trigger: AAAGAGACACTGAAGAGTCAAATGGAACAACAGAGC...TTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp GTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAACAGACATTATTTTCTaGAGCCTTACTACTGTGTCC +
Preference number: 5 (lower is better)
Translates to: VYIYHSLKNVRQMHMIGETDIIF*SLTTVS
Trigger: GGACACAGTAGTAAGGCTCAAGAAAATAATGTCTGT...TTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp AAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAAAGGAAGAACTGTCTaGTTCGTCTTGAGAGACAAA +
Preference number: 5 (lower is better)
Translates to: KGGLHLSFSEECEADAHDKGRTV*FVLRDK
Trigger: TTTGTCTCTCAAGACGAACAAGACAGTTCTTCCTTT...ATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp GTGAGTTATCTAGTTACAGCTGAAGTAGTTTCTCTGAAACAAGTTTCCTACTTCCACTTCAGAGTTTGTTaGTCAACGTTCTCCACATAC +
Preference number: 5 (lower is better)
Translates to: VSYLVTAEVVSLKQVSYFHFRVC*STFSTY
Trigger: GTATGTGGAGAACGTTGACAAACAAACTCTGAAGTG...GAAGTAGGAAACTTGTTTCAGAGAAACTACTTCAGCTGTAACTAGATAACTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS-3UTR CAA 90 bp GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTGTATATACGCGTGTGTaGTCAGTTTCTTGGAATTTT +
Preference number: 5 (lower is better)
Translates to: EKAQLQYTCHKDYVSNLAVYTRV*SVSWNF
Trigger: AAAATTCCAAGAAACTGACAACACACGCGTATATAC...AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS-3UTR CAA 90 bp GTGAGTTATCTAGTTACAGCTGAAGTAGTTTCTCTGAAACAAGTTTCCTACTTCAGTCATATCGGATTTTaGGAGAAACAACTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VSYLVTAEVVSLKQVSYFSHIGF*EKQLLF
Trigger: GAAAAGGAGTTGTTTCTCCAAAAATCCGATATGACT...GAAGTAGGAAACTTGTTTCAGAGAAACTACTTCAGCTGTAACTAGATAACTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044604.16
CDS CAA 90 bp AAGTACCTGAGTCCTCGCTGGGTGGCTGGCAGCCTCCTCCTCCCTTaGGCTCCCCTCCTCAGGAGGGCCCCAGGGAGTCTGTGGGTCCTT +
Preference number: 6 (lower is better)
Translates to: KYLSPRWVAGSLLLP*APLLRRAPGSLWVL
Trigger: AAGGACCCACAGACTCCCTGGGGCCCTCCTGAGGAGGGGAGCCAAAGGGAGGAGGAGGCTGCCAGCCACCCAGCGAGGACTCAGGTACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp CTGACTTGTACTCACGGGCTCATTTTCAACACTGGCTaGACTCCGGCTCACTCCCGCCGGCTGGCCGGTCCC +
Preference number: 6 (lower is better)
Translates to: LTCTHGLIFNTG*TPAHSRRLAGP
Trigger: GGGACCGGCCAGCCGGCGGGAGTGAGCCGGAGTGCAGCCAGTGTTGAAAATGAGCCCGTGAGTACAAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp TTCCTGTTGGCCCCCAAGAAGTACCTGAGTCCTCGCTaGGTGGCTGGCAGCCTCCTCCTCCCTTTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: FLLAPKKYLSPR*VAGSLLLPLAP
Trigger: GGGAGCCAAAGGGAGGAGGAGGCTGCCAGCCACCCAGCGAGGACTCAGGTACTTCTTGGGGGCCAACAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp GATTTACTGCGGGAGAAGTCAGGAACAGAAGGCCTCTaGGGCCGAGCCGGCTCCTCTCCCGGCACTGATGGC +
Preference number: 6 (lower is better)
Translates to: DLLREKSGTEGL*GRAGSSPGTDG
Trigger: GCCATCAGTGCCGGGAGAGGAGCCGGCTCGGCCTCAGAGGCCTTCTGTTCCTGACTTCTCCCGCAGTAAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp TGGCCTCTGGGGTGGAATCCGGAAGGTCCTTTGGCTTaGGGAGATCGTCCACCATGGGGAGGATGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: WPLGWNPEGPLA*GDRPPWGGWPA
Trigger: AGCCGGCCATCCTCCCCATGGTGGACGATCTCCCAAAGCCAAAGGACCTTCCGGATTCCACCCCAGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp TTCTGCTCTCAGACCTTTCGCAGGCCAGGCCAGGCATaGTGGAGGTGTCGGGAAACAGGAGAGACTGTGACC +
Preference number: 6 (lower is better)
Translates to: FCSQTFRRPGQA*WRCRETGETVT
Trigger: GGTCACAGTCTCTCCTGTTTCCCGACACCTCCAGCATGCCTGGCCTGGCCTGCGAAAGGTCTGAGAGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp TTTTCTGACTTGTACTCACGGGCTCATTTTCAACACTaGCTGCACTCCGGCTCACTCCCGCCGGCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: FSDLYSRAHFQH*LHSGSLPPAGR
Trigger: CCGGCCAGCCGGCGGGAGTGAGCCGGAGTGCAGCCAGTGTTGAAAATGAGCCCGTGAGTACAAGTCAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp GCTGCCGGTCGCTCTCTCCTGTTTTGGCCTCTGGGGTaGAATCCGGAAGGTCCTTTGGCTTTGGGAGATCGT +
Preference number: 6 (lower is better)
Translates to: AAGRSLLFWPLG*NPEGPLALGDR
Trigger: ACGATCTCCCAAAGCCAAAGGACCTTCCGGATTCCACCCCAGAGGCCAAAACAGGAGAGAGCGACCGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp CTCCACTTCTGCCTGAGCTGCCCGTGTTCAGTCCACAAGGCCACCTaGGCTCCAGGAGTGTCCCGGCCTCCAATCACATCAAGACATGTA +
Preference number: 6 (lower is better)
Translates to: LHFCLSCPCSVHKAT*APGVSRPPITSRHV
Trigger: TACATGTCTTGATGTGATTGGAGGCCGGGACACTCCTGGAGCCAAGGTGGCCTTGTGGACTGAACACGGGCAGCTCAGGCAGAAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS GCA 72 bp CAGGAGGAGCCAGCAGCCACGGAGAACCTTAAAGGATaGCGGCGTGAACGAGGTCAGGTCGGCACATTCTTT +
Preference number: 6 (lower is better)
Translates to: QEEPAATENLKG*RRERGQVGTFF
Trigger: AAAGAATGTGCCGACCTGACCTCGTTCACGCCGGCATCCTTTAAGGTTCTCCGTGGCTGCTGGCTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 72 bp GTTCCGTTCCTGCTCATTCTCCACTTCTGCCTGAGCTaGCCGTGTTCAGTCCACAAGGCCACCTTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: VPFLLILHFCLS*PCSVHKATLAP
Trigger: TGGAGCCAAGGTGGCCTTGTGGACTGAACACGGGCAGCTCAGGCAGAAGTGGAGAATGAGCAGGAACGGAAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 72 bp GCTCTTCCACATTGGGGACAGATCGGTGTATGTAGATaGGGCTGCACCCAGGGTCAGTCTTGGGGCACAGCT +
Preference number: 6 (lower is better)
Translates to: ALPHWGQIGVCR*GCTQGQSWGTA
Trigger: AGCTGTGCCCCAAGACTGACCCTGGGTGCAGCCCCATCTACATACACCGATCTGTCCCCAATGTGGAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp TTTTGGCTGCCGGTCGCTCTCTCCTGTTTTGGCCTCTaGGGTGGAATCCGGAAGGTCCTTTGGCTTTGGGAG +
Preference number: 6 (lower is better)
Translates to: FWLPVALSCFGL*GGIRKVLWLWE
Trigger: CTCCCAAAGCCAAAGGACCTTCCGGATTCCACCCCAGAGGCCAAAACAGGAGAGAGCGACCGGCAGCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp CTGGAGGCAGCGGCAGAATCCCAGGCAGATTACTCGTaGGAACAGCAGCAGAGCGATCTGGGGTGTTCATCT +
Preference number: 6 (lower is better)
Translates to: LEAAAESQADYS*EQQQSDLGCSS
Trigger: AGATGAACACCCCAGATCGCTCTGCTGCTGTTCTCACGAGTAATCTGCCTGGGATTCTGCCGCTGCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp AGACAGAAGAGGGCTGGTTTGCACTCTCCCTTGACTTaGAAGAGCCATGGTGACCAGGCGAGACCTCACTGG +
Preference number: 6 (lower is better)
Translates to: RQKRAGLHSPLT*KSHGDQARPHW
Trigger: CCAGTGAGGTCTCGCCTGGTCACCATGGCTCTTCCAAGTCAAGGGAGAGTGCAAACCAGCCCTCTTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp GGTGTATGTAGATGGGGCTGCACCCAGGGTCAGTCTTaGGGCACAGCTCTATCACCGGAATGCTGCAATCCT +
Preference number: 6 (lower is better)
Translates to: GVCRWGCTQGQS*GTALSPECCNP
Trigger: AGGATTGCAGCATTCCGGTGATAGAGCTGTGCCCCAAGACTGACCCTGGGTGCAGCCCCATCTACATACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp GAATCCGTCTGGTCAGCAGATGCCTCAGAACACTGCTaGCATGATCGGTTAACTGACACCGGTGCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: ESVWSADASEHC*HDRLTDTGAPA
Trigger: TGCTGGGGCACCGGTGTCAGTTAACCGATCATGCCAGCAGTGTTCTGAGGCATCTGCTGACCAGACGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp AAGCTTTCTTTTGGCTGCCGGTCGCTCTCTCCTGTTTaGGCCTCTGGGGTGGAATCCGGAAGGTCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: KLSFGCRSLSPV*ASGVESGRSFG
Trigger: GCCAAAGGACCTTCCGGATTCCACCCCAGAGGCCAAAACAGGAGAGAGCGACCGGCAGCCAAAAGAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp CTTGAATCCGTCTGGTCAGCAGATGCCTCAGAACACTaGTGGCATGATCGGTTAACTGACACCGGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: LESVWSADASEH*WHDRLTDTGAP
Trigger: TGGGGCACCGGTGTCAGTTAACCGATCATGCCAGCAGTGTTCTGAGGCATCTGCTGACCAGACGGATTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp ACTTGGACACTGGTTCCTGAAGGGTGCCACCAAATCTaGTCCCCGTCTCTGAGGAGTGAGTCCTGGAAGTCT +
Preference number: 6 (lower is better)
Translates to: TWTLVPEGCHQI*SPSLRSESWKS
Trigger: AGACTTCCAGGACTCACTCCTCAGAGACGGGGACCAGATTTGGTGGCACCCTTCAGGAACCAGTGTCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp GCCTGCATGGTCCTGAACACGGAAATACTTGGACACTaGTTCCTGAAGGGTGCCACCAAATCTGGTCCCCGT +
Preference number: 6 (lower is better)
Translates to: ACMVLNTEILGH*FLKGATKSGPR
Trigger: ACGGGGACCAGATTTGGTGGCACCCTTCAGGAACCAGTGTCCAAGTATTTCCGTGTTCAGGACCATGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp TTGACAATGGGACCGTCACAGTGTCCCTTATGCTTCTaGAGCCAGCATGTGCCTGGGGACTTGAGTCAGAGC +
Preference number: 6 (lower is better)
Translates to: LTMGPSQCPLCF*SQHVPGDLSQS
Trigger: GCTCTGACTCAAGTCCCCAGGCACATGCTGGCTCCAGAAGCATAAGGGACACTGTGACGGTCCCATTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp GGGATAAGACAGAAGAGGGCTGGTTTGCACTCTCCCTaGACTTGGAAGAGCCATGGTGACCAGGCGAGACCT +
Preference number: 6 (lower is better)
Translates to: GIRQKRAGLHSP*TWKSHGDQARP
Trigger: AGGTCTCGCCTGGTCACCATGGCTCTTCCAAGTCAAGGGAGAGTGCAAACCAGCCCTCTTCTGTCTTATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 90 bp ACTGTAGGAGGGATAAGACAGAAGAGGGCTGGTTTGCACTCTCCCTaGACTTGGAAGAGCCATGGTGACCAGGCGAGACCTCACTGGACA +
Preference number: 6 (lower is better)
Translates to: TVGGIRQKRAGLHSP*TWKSHGDQARPHWT
Trigger: TGTCCAGTGAGGTCTCGCCTGGTCACCATGGCTCTTCCAAGTCAAGGGAGAGTGCAAACCAGCCCTCTTCTGTCTTATCCCTCCTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 90 bp GCTCTGACACTGACTGTAGGAGGGATAAGACAGAAGAGGGCTGGTTaGCACTCTCCCTTGACTTGGAAGAGCCATGGTGACCAGGCGAGA +
Preference number: 6 (lower is better)
Translates to: ALTLTVGGIRQKRAG*HSPLTWKSHGDQAR
Trigger: TCTCGCCTGGTCACCATGGCTCTTCCAAGTCAAGGGAGAGTGCAAACCAGCCCTCTTCTGTCTTATCCCTCCTACAGTCAGTGTCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 72 bp AACATAGTCGATGGGCTGGAGTGCTCTGATTCTAGCTaGTGGGCAGCCGCAGGAAGTGAGGTCAACGTAGAG +
Preference number: 6 (lower is better)
Translates to: NIVDGLECSDSS*WAAAGSEVNVE
Trigger: CTCTACGTTGACCTCACTTCCTGCGGCTGCCCATCAGCTAGAATCAGAGCACTCCAGCCCATCGACTATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 72 bp GAACACGGAAATACTTGGACACTGGTTCCTGAAGGGTaGCACCAAATCTGGTCCCCGTCTCTGAGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: EHGNTWTLVPEG*HQIWSPSLRSE
Trigger: CTCACTCCTCAGAGACGGGGACCAGATTTGGTGGCACCCTTCAGGAACCAGTGTCCAAGTATTTCCGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp ACTTGGAAGAGCCATGGTGACCAGGCGAGACCTCACTaGACAGAACATCCTCCTGCGAACTGTCATCCTCAT +
Preference number: 6 (lower is better)
Translates to: TWKSHGDQARPH*TEHPPANCHPH
Trigger: ATGAGGATGACAGTTCGCAGGAGGATGTTCTGTCCAGTGAGGTCTCGCCTGGTCACCATGGCTCTTCCAAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp GGGAGAGATGCAGACAGACATTGTCCGTGCATCTGCTaGGTTCCCAGTGACTGTCAAGTATTCATCCTGGGC +
Preference number: 6 (lower is better)
Translates to: GRDADRHCPCIC*VPSDCQVFILG
Trigger: GCCCAGGATGAATACTTGACAGTCACTGGGAACCCAGCAGATGCACGGACAATGTCTGTCTGCATCTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 72 bp ACAGTGTCCCTTATGCTTCTGGAGCCAGCATGTGCCTaGGGACTTGAGTCAGAGCTTCCATCTTCTCCGTCT +
Preference number: 6 (lower is better)
Translates to: TVSLMLLEPACA*GLESELPSSPS
Trigger: AGACGGAGAAGATGGAAGCTCTGACTCAAGTCCCCAGGCACATGCTGGCTCCAGAAGCATAAGGGACACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp CCCAGGACAAAGTTCCTTTCTGGGTGCTTCCTGTTCTaGAGAAGCCAGTCCCGGTCTAACACTCTTTCCCCT +
Preference number: 6 (lower is better)
Translates to: PRTKFLSGCFLF*RSQSRSNTLSP
Trigger: AGGGGAAAGAGTGTTAGACCGGGACTGGCTTCTTCAGAACAGGAAGCACCCAGAAAGGAACTTTGTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 72 bp GTCACAGCATGTCCCTGGAGAGCCATAATGCAGGCGTaGTTGACAGTCCGCCTTGATGGGTTATCTACAGCT +
Preference number: 6 (lower is better)
Translates to: VTACPWRAIMQA*LTVRLDGLSTA
Trigger: AGCTGTAGATAACCCATCAAGGCGGACTGTCAATCACGCCTGCATTATGGCTCTCCAGGGACATGCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp CCCACTGTAGGGAGAGATGCAGACAGACATTGTCCGTaGATCTGCTGGGTTCCCAGTGACTGTCAAGTATTC +
Preference number: 6 (lower is better)
Translates to: PTVGRDADRHCP*ICWVPSDCQVF
Trigger: GAATACTTGACAGTCACTGGGAACCCAGCAGATGCACGGACAATGTCTGTCTGCATCTCTCCCTACAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 72 bp GACACTGACTGTAGGAGGGATAAGACAGAAGAGGGCTaGTTTGCACTCTCCCTTGACTTGGAAGAGCCATGG +
Preference number: 6 (lower is better)
Translates to: DTDCRRDKTEEG*FALSLDLEEPW
Trigger: CCATGGCTCTTCCAAGTCAAGGGAGAGTGCAAACCAGCCCTCTTCTGTCTTATCCCTCCTACAGTCAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp TCAGTCTGCCTGCATGGTCCTGAACACGGAAATACTTaGACACTGGTTCCTGAAGGGTGCCACCAAATCTGG +
Preference number: 6 (lower is better)
Translates to: SVCLHGPEHGNT*TLVPEGCHQIW
Trigger: CCAGATTTGGTGGCACCCTTCAGGAACCAGTGTCCAAGTATTTCCGTGTTCAGGACCATGCAGGCAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp CACCGCAGAGCTGTTTACTCTCGGTGGACTGTCGGTTaGAGTTTTCCTCTGAAATTCTGGACAAGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: HRRAVYSRWTVG*SFPLKFWTRAL
Trigger: CAAGGCCCTTGTCCAGAATTTCAGAGGAAAACTCCAACCGACAGTCCACCGAGAGTAAACAGCTCTGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp CAGCCCATCAGTCACCGCAGAGCTGTTTACTCTCGGTaGACTGTCGGTTGGAGTTTTCCTCTGAAATTCTGG +
Preference number: 6 (lower is better)
Translates to: QPISHRRAVYSR*TVGWSFPLKFW
Trigger: CCAGAATTTCAGAGGAAAACTCCAACCGACAGTCCACCGAGAGTAAACAGCTCTGCGGTGACTGATGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp AGGCAGATTACTCGTGAGAACAGCAGCAGAGCGATCTaGGGTGTTCATCTCCGTTTCTTGTCCACCGTGATG +
Preference number: 6 (lower is better)
Translates to: RQITRENSSRAI*GVHLRFLSTVM
Trigger: CATCACGGTGGACAAGAAACGGAGATGAACACCCCAGATCGCTCTGCTGCTGTTCTCACGAGTAATCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp CTGACTGTAGGAGGGATAAGACAGAAGAGGGCTGGTTaGCACTCTCCCTTGACTTGGAAGAGCCATGGTGAC +
Preference number: 6 (lower is better)
Translates to: LTVGGIRQKRAG*HSPLTWKSHGD
Trigger: GTCACCATGGCTCTTCCAAGTCAAGGGAGAGTGCAAACCAGCCCTCTTCTGTCTTATCCCTCCTACAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 72 bp AGACAGACATTGTCCGTGCATCTGCTGGGTTCCCAGTaGCTGTCAAGTATTCATCCTGGGCTCGGTTCCTTA +
Preference number: 6 (lower is better)
Translates to: RQTLSVHLLGSQ*LSSIHPGLGSL
Trigger: TAAGGAACCGAGCCCAGGATGAATACTTGACAGTCACTGGGAACCCAGCAGATGCACGGACAATGTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS TCA 72 bp TTTCACTTTCTGTGCATGCGACAACCACCGAGTCACTaGCACCCTTCACAGACCCAGGGTCCTCTTGAGTTT +
Preference number: 6 (lower is better)
Translates to: FHFLCMRQPPSH*HPSQTQGPLEF
Trigger: AAACTCAAGAGGACCCTGGGTCTGTGAAGGGTGTCAGTGACTCGGTGGTTGTCGCATGCACAGAAAGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp TACCTTCTTTTTCAAAATGATGGACCAGGTCAGTTCTaGTCTCAGACCTTTCGCAGGCCAGGCCAGGCATGC +
Preference number: 6 (lower is better)
Translates to: YLLFQNDGPGQF*SQTFRRPGQAC
Trigger: GCATGCCTGGCCTGGCCTGCGAAAGGTCTGAGAGCAGAACTGACCTGGTCCATCATTTTGAAAAAGAAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 72 bp TGGAGAAACAACTCCTTTTCTGACCACCGGCCATGCTaGAGACTGGAGGTCGTTGGTTCACTGAACTCTACA +
Preference number: 6 (lower is better)
Translates to: WRNNSFSDHRPC*RLEVVGSLNST
Trigger: TGTAGAGTTCAGTGAACCAACGACCTCCAGTCTGCAGCATGGCCGGTGGTCAGAAAAGGAGTTGTTTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 72 bp GTAGGGAGAGATGCAGACAGACATTGTCCGTGCATCTaGTGGGTTCCCAGTGACTGTCAAGTATTCATCCTG +
Preference number: 6 (lower is better)
Translates to: VGRDADRHCPCI*WVPSDCQVFIL
Trigger: CAGGATGAATACTTGACAGTCACTGGGAACCCAGCAGATGCACGGACAATGTCTGTCTGCATCTCTCCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 72 bp GGTGGTAGGCAACCCACACTCCACTCTTCACGTGAATaGATCTTGTCTCGCTGCCAAAGCCGATTTCTTCTA +
Preference number: 6 (lower is better)
Translates to: GGRQPTLHSSRE*ILSRCQSRFLL
Trigger: TAGAAGAAATCGGCTTTGGCAGCGAGACAAGATCCATTCACGTGAAGAGTGGAGTGTGGGTTGCCTACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp TCTGCTGGGTTCCCAGTGACTGTCAAGTATTCATCCTaGGCTCGGTTCCTTATTCTGATGTACACTGCAGGC +
Preference number: 6 (lower is better)
Translates to: SAGFPVTVKYSS*ARFLILMYTAG
Trigger: GCCTGCAGTGTACATCAGAATAAGGAACCGAGCCCAGGATGAATACTTGACAGTCACTGGGAACCCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CAA 72 bp AGCCAAACGCCTGACTTCACAGTGACGGATGTAGACTaGGGGATGTTCAGCTCTTCCACATTGGGGACAGAT +
Preference number: 6 (lower is better)
Translates to: SQTPDFTVTDVD*GMFSSSTLGTD
Trigger: ATCTGTCCCCAATGTGGAAGAGCTGAACATCCCCAAGTCTACATCCGTCACTGTGAAGTCAGGCGTTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 72 bp TCTGTTTCACACGGTGGCTCCGGTGGCTCCGTTTCTTaGGGTAAGGACTCAATTCTGACTTCGGGAGTTCTT +
Preference number: 6 (lower is better)
Translates to: SVSHGGSGGSVS*GKDSILTSGVL
Trigger: AAGAACTCCCGAAGTCAGAATTGAGTCCTTACCCAAAGAAACGGAGCCACCGGAGCCACCGTGTGAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp CGAGTCACTGACACCCTTCACAGACCCAGGGTCCTCTaGAGTTTTTCCCATCTCGTGAGGAGTTTTGACATG +
Preference number: 6 (lower is better)
Translates to: RVTDTLHRPRVL*SFSHLVRSFDM
Trigger: CATGTCAAAACTCCTCACGAGATGGGAAAAACTCAAGAGGACCCTGGGTCTGTGAAGGGTGTCAGTGACTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp GGGCACAGCTCTATCACCGGAATGCTGCAATCCTTTAAGACACGTTaGATAGAGCCCAGGACAAAGTTCCTTTCTGGGTGCTTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: GHSSITGMLQSFKTR*IEPRTKFLSGCFLF
Trigger: GAACAGGAAGCACCCAGAAAGGAACTTTGTCCTGGGCTCTATCAAACGTGTCTTAAAGGATTGCAGCATTCCGGTGATAGAGCTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 72 bp AGTCATATCGGATTTTTGGAGAAACAACTCCTTTTCTaGCCACCGGCCATGCTGCAGACTGGAGGTCGTTGG +
Preference number: 6 (lower is better)
Translates to: SHIGFLEKQLLF*PPAMLQTGGRW
Trigger: CCAACGACCTCCAGTCTGCAGCATGGCCGGTGGTCAGAAAAGGAGTTGTTTCTCCAAAAATCCGATATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 72 bp TTTGTCAACGTTCTCCACATACGGACTCAGTCTGCCTaGATGGTCCTGAACACGGAAATACTTGGACACTGG +
Preference number: 6 (lower is better)
Translates to: FVNVLHIRTQSA*MVLNTEILGHW
Trigger: CCAGTGTCCAAGTATTTCCGTGTTCAGGACCATGCAGGCAGACTGAGTCCGTATGTGGAGAACGTTGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 72 bp GACCTCCAAGCAAATATCCTTTTGTGGCTACGTCTTTaGTGTCTGTTGACAATGGGACCGTCACAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: DLQANILLWLRL*CLLTMGPSQCP
Trigger: GGGACACTGTGACGGTCCCATTGTCAACAGACAGCAAAGACGTAGCCACAAAAGGATATTTGCTTGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp AGAGGAAATGTTGCACTGAGGAACATCTCTGGGTTCTaGCTGAGAAACAGAGGGTGTGGACAAGGCTTTTCG +
Preference number: 6 (lower is better)
Translates to: RGNVALRNISGF*LRNRGCGQGFS
Trigger: CGAAAAGCCTTGTCCACACCCTCTGTTTCTCAGGCAGAACCCAGAGATGTTCCTCAGTGCAACATTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp CTTGAGAAGAGGAAATGTTGCACTGAGGAACATCTCTaGGTTCTGCCTGAGAAACAGAGGGTGTGGACAAGG +
Preference number: 6 (lower is better)
Translates to: LEKRKCCTEEHL*VLPEKQRVWTR
Trigger: CCTTGTCCACACCCTCTGTTTCTCAGGCAGAACCCAGAGATGTTCCTCAGTGCAACATTTCCTCTTCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp GCTTCTTTCACAGTACCTGGATTCATTACATCCTCTTaGGCTAGATGCTCCTGGCAGGTACCAACCGTGTGT +
Preference number: 6 (lower is better)
Translates to: ASFTVPGFITSS*ARCSWQVPTVC
Trigger: ACACACGGTTGGTACCTGCCAGGAGCATCTAGCCCAAGAGGATGTAATGAATCCAGGTACTGTGAAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp AAGGTAACATGCTCCCTCTTTTCAGTTCTCCAATCTTaGCCCGAAGCTACAGCTTCCTCCTCCTCTTCCTCG +
Preference number: 6 (lower is better)
Translates to: KVTCSLFSVLQS*PEATASSSSSS
Trigger: CGAGGAAGAGGAGGAGGAAGCTGTAGCTTCGGGCAAAGATTGGAGAACTGAAAAGAGGGAGCATGTTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 72 bp AGGCAACCCACACTCCACTCTTCACGTGAATGGATCTaGTCTCGCTGCCAAAGCCGATTTCTTCTAAGTCAG +
Preference number: 6 (lower is better)
Translates to: RQPTLHSSREWI*SRCQSRFLLSQ
Trigger: CTGACTTAGAAGAAATCGGCTTTGGCAGCGAGACAAGATCCATTCACGTGAAGAGTGGAGTGTGGGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 72 bp GTCTGTGGGTCCTTCTCAGGTTTCTCCTGGTCATCTTaGAAGGAAGACTGCTTAACCTCTCCAAGAGACGAC +
Preference number: 6 (lower is better)
Translates to: VCGSFSGFSWSS*KEDCLTSPRDD
Trigger: GTCGTCTCTTGGAGAGGTTAAGCAGTCTTCCTTCAAAGATGACCAGGAGAAACCTGAGAAGGACCCACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp ACTGAAGGCTTCTCTGGCTTACCGACCGTGTCTTTTTaGGGCATCTCAGTGGTTTCCTGTTCGCTGTCTTGT +
Preference number: 6 (lower is better)
Translates to: TEGFSGLPTVSF*GISVVSCSLSC
Trigger: ACAAGACAGCGAACAGGAAACCACTGAGATGCCCAAAAAAGACACGGTCGGTAAGCCAGAGAAGCCTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp CCTTCTGGTAAGTGTCTTCCATTCCTAATGTCACAGTaGTCGCTTCAGCCTCTGAAGCACTCCCCACACCAT +
Preference number: 6 (lower is better)
Translates to: PSGKCLPFLMSQ*SLQPLKHSPHH
Trigger: ATGGTGTGGGGAGTGCTTCAGAGGCTGAAGCGACAACTGTGACATTAGGAATGGAAGACACTTACCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp GCCAAGCCTGTTGATTCTAGAAGCCAAGGTAGGAGGTaGGGCACTGTAATCAGACGTTTTACAGTCAAGGTG +
Preference number: 6 (lower is better)
Translates to: AKPVDSRSQGRR*GTVIRRFTVKV
Trigger: CACCTTGACTGTAAAACGTCTGATTACAGTGCCTCACCTCCTACCTTGGCTTCTAGAATCAACAGGCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp TCTCCATGCTCAAAGTTTAAAGCTACCCCAGCTAACTaGGTGCCAGCAGTTTCAGGACCTGAAGGAGATTGG +
Preference number: 6 (lower is better)
Translates to: SPCSKFKATPAN*VPAVSGPEGDW
Trigger: CCAATCTCCTTCAGGTCCTGAAACTGCTGGCACTCAGTTAGCTGGGGTAGCTTTAAACTTTGAGCATGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp AAGGGGATGGAAGGATCTGGCAAGTGGAAGGTAACATaGTCCCTCTTTTCAGTTCTCCAATCTTTGCCCGAA +
Preference number: 6 (lower is better)
Translates to: KGMEGSGKWKVT*SLFSVLQSLPE
Trigger: TTCGGGCAAAGATTGGAGAACTGAAAAGAGGGAGCATGTTACCTTCCACTTGCCAGATCCTTCCATCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp CAGTTCACGGTTCTCAGTGCTGCCACTGGAATCCTCTaGAGCCATTACTTCCATTTCTATCTTAGAAGGCAC +
Preference number: 6 (lower is better)
Translates to: QFTVLSAATGIL*SHYFHFYLRRH
Trigger: GTGCCTTCTAAGATAGAAATGGAAGTAATGGCTCCAGAGGATTCCAGTGGCAGCACTGAGAACCGTGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp ACAGAACATCCTCCTGCGAACTGTCATCCTCATAGATaGGGCTCAGGGCTAAGGGATAGATTTTGTACCTCT +
Preference number: 6 (lower is better)
Translates to: TEHPPANCHPHR*GSGLRDRFCTS
Trigger: AGAGGTACAAAATCTATCCCTTAGCCCTGAGCCCCATCTATGAGGATGACAGTTCGCAGGAGGATGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CCA 72 bp GCCGATTGTCTTCCACCCACTGAATGCTGTCCAATTTaGAATCTCCTTAGGCGTAAGAAGGATTTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: ADCLPPTECCPI*NLLRRKKDLPS
Trigger: GGAAGGCAAATCCTTCTTACGCCTAAGGAGATTCCAAATTGGACAGCATTCAGTGGGTGGAAGACAATCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 72 bp TTTCTAAACCCAGGAGAGAAGGCACAGTCAGTGAGCTaGAGCCCTCAGGTGCAAACACATTTTTCTCCAGAT +
Preference number: 6 (lower is better)
Translates to: FLNPGEKAQSVS*SPQVQTHFSPD
Trigger: ATCTGGAGAAAAATGTGTTTGCACCTGAGGGCTCCAGCTCACTGACTGTGCCTTCTCTCCTGGGTTTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp TGGGCATCTCAGTGGTTTCCTGTTCGCTGTCTTGTGTaGAATCCAAAGAAAAGGCATCGGAGAGTTCTGAGG +
Preference number: 6 (lower is better)
Translates to: WASQWFPVRCLV*NPKKRHRRVLR
Trigger: CCTCAGAACTCTCCGATGCCTTTTCTTTGGATTCAACACAAGACAGCGAACAGGAAACCACTGAGATGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp CGAGGTCAGGTCGGCACATTCTTTTACGAAATCGATACACTCTCCTaGGAAGCCTGCTTTACTGAATGCTTTGAGCAAGTGTGTAGGCTC +
Preference number: 6 (lower is better)
Translates to: RGQVGTFFYEIDTLS*EACFTECFEQVCRL
Trigger: GAGCCTACACACTTGCTCAAAGCATTCAGTAAAGCAGGCTTCCAAGGAGAGTGTATCGATTTCGTAAAAGAATGTGCCGACCTGACCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 90 bp GGCTATAACCAGAGGCTTCTAATGGACCTCCAAGCAAATATCCTTTaGTGGCTACGTCTTTGCTGTCTGTTGACAATGGGACCGTCACAG +
Preference number: 6 (lower is better)
Translates to: GYNQRLLMDLQANIL*WLRLCCLLTMGPSQ
Trigger: CTGTGACGGTCCCATTGTCAACAGACAGCAAAGACGTAGCCACAAAAGGATATTTGCTTGGAGGTCCATTAGAAGCCTCTGGTTATAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp TTTCTTCATCCTTCTGGTAAGTGTCTTCCATTCCTAATGTCACAGTaGTCGCTTCAGCCTCTGAAGCACTCCCCACACCATCGCTTTGGT +
Preference number: 6 (lower is better)
Translates to: FLHPSGKCLPFLMSQ*SLQPLKHSPHHRFG
Trigger: ACCAAAGCGATGGTGTGGGGAGTGCTTCAGAGGCTGAAGCGACAACTGTGACATTAGGAATGGAAGACACTTACCAGAAGGATGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp ATTGGCATTTTTCACCATGAGGAAGAAATTCCTTGGATTCAAGGGTaGAGGACGCATGTCCAAGGTAAAGCGCAGGAGGATTCTCCCTGT +
Preference number: 6 (lower is better)
Translates to: IGIFHHEEEIPWIQG*RTHVQGKAQEDSPC
Trigger: ACAGGGAGAATCCTCCTGCGCTTTACCTTGGACATGCGTCCTCAACCCTTGAATCCAAGGAATTTCTTCCTCATGGTGAAAAATGCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp CTTGTCTCACCAACTGCAGATGAAACACTGGTCTCTTCTTCCTCTTaGACTCCTGACATACTGTCCACACCTTTCTCGTCCAAACTCTCT +
Preference number: 6 (lower is better)
Translates to: LVSPTADETLVSSSS*TPDILSTPFSSKLS
Trigger: AGAGAGTTTGGACGAGAAAGGTGTGGACAGTATGTCAGGAGTCAAAGAGGAAGAAGAGACCAGTGTTTCATCTGCAGTTGGTGAGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp CTTAAAATGAATATCTGGGTAGGCCAGCCAAACGCCTaGCTTCACAGTGACGGATGTAGACTTGGGGATGTT +
Preference number: 6 (lower is better)
Translates to: LKMNIWVGQPNA*LHSDGCRLGDV
Trigger: AACATCCCCAAGTCTACATCCGTCACTGTGAAGTCAGGCGTTTGGCTGGCCTACCCAGATATTCATTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 72 bp TTCCACTTTCAGTCCACCCATTTGAAGAGGATGCAGTaGTTTCATCTCGGCTGCAGAAATCTCAAAGAGCCC +
Preference number: 6 (lower is better)
Translates to: FHFQSTHLKRMQ*FHLGCRNLKEP
Trigger: GGGCTCTTTGAGATTTCTGCAGCCGAGATGAAATCACTGCATCCTCTTCAAATGGGTGGACTGAAAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 72 bp GGACTTGAGTCAGAGCTTCCATCTTCTCCGTCTAAGTaGTTCATAGTCTCCAACACAGGCTGTTGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: GLESELPSSPSK*FIVSNTGCCCK
Trigger: TTTGCAGCAACAGCCTGTGTTGGAGACTATGAATCACTTAGACGGAGAAGATGGAAGCTCTGACTCAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp AGAGGTGCCTCAGCATCAGAGGCAACGCCGCCTTGTTaGGAATTCTCTAAGAGAAAAGGAGATTCAGAAGTA +
Preference number: 6 (lower is better)
Translates to: RGASASEATPPC*EFSKRKGDSEV
Trigger: TACTTCTGAATCTCCTTTTCTCTTAGAGAATTCTCAACAAGGCGGCGTTGCCTCTGATGCTGAGGCACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp TCATGTGAATTTACAGCTGTGCTCTCTCCCTTAGTGTaGCAAAAGGAGGGAGATGTGTTACCAGTACCAGCG +
Preference number: 6 (lower is better)
Translates to: SCEFTAVLSPLV*QKEGDVLPVPA
Trigger: CGCTGGTACTGGTAACACATCTCCCTCCTTTTGTCACACTAAGGGAGAGAGCACAGCTGTAAATTCACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp ATACAGAATCCAGCAGCCCCTTACAACTTTTATCAGTaGCCCATTCGGGAAAGACCATGTTGTAGCATCAGG +
Preference number: 6 (lower is better)
Translates to: IQNPAAPYNFYQ*PIRERPCCSIR
Trigger: CCTGATGCTACAACATGGTCTTTCCCGAATGGGGCACTGATAAAAGTTGTAAGGGGCTGCTGGATTCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 72 bp ACAGTACCTGGATTCATTACATCCTCTTGGGCTAGATaGTCCTGGCAGGTACCAACCGTGTGTTTGGATTTT +
Preference number: 6 (lower is better)
Translates to: TVPGFITSSWAR*SWQVPTVCLDF
Trigger: AAAATCCAAACACACGGTTGGTACCTGCCAGGAGCATCTAGCCCAAGAGGATGTAATGAATCCAGGTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp AGGCTTCTAATGGACCTCCAAGCAAATATCCTTTTGTaGCTACGTCTTTGCTGTCTGTTGACAATGGGACCG +
Preference number: 6 (lower is better)
Translates to: RLLMDLQANILL*LRLCCLLTMGP
Trigger: CGGTCCCATTGTCAACAGACAGCAAAGACGTAGCCACAAAAGGATATTTGCTTGGAGGTCCATTAGAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp CTCTGCTTTCATGAGATTGTCAAAGTAGGCAGTGGTTaGGGAATCAAGACATGCCTTCCTAGTATGAGTGCC +
Preference number: 6 (lower is better)
Translates to: LCFHEIVKVGSG*GIKTCLPSMSA
Trigger: GGCACTCATACTAGGAAGGCATGTCTTGATTCCCCAACCACTGCCTACTTTGACAATCTCATGAAAGCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp CCTGGATTCATTACATCCTCTTGGGCTAGATGCTCCTaGCAGGTACCAACCGTGTGTTTGGATTTTAGTTCT +
Preference number: 6 (lower is better)
Translates to: PGFITSSWARCS*QVPTVCLDFSS
Trigger: AGAACTAAAATCCAAACACACGGTTGGTACCTGCCAGGAGCATCTAGCCCAAGAGGATGTAATGAATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp GACACTAGCAGACTGTCCAGCCCCACTTCCAAAATCTaGGCACTCTTGATAGGGAACAATTTCTCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: DTSRLSSPTSKI*ALLIGNNFSSF
Trigger: AAAGGAAGAGAAATTGTTCCCTATCAAGAGTGCCCAGATTTTGGAAGTGGGGCTGGACAGTCTGCTAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp TCTATCACCGGAATGCTGCAATCCTTTAAGACACGTTaGATAGAGCCCAGGACAAAGTTCCTTTCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: SITGMLQSFKTR*IEPRTKFLSGC
Trigger: GCACCCAGAAAGGAACTTTGTCCTGGGCTCTATCAAACGTGTCTTAAAGGATTGCAGCATTCCGGTGATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 72 bp GCAAATATCCTTTTGTGGCTACGTCTTTGCTGTCTGTaGACAATGGGACCGTCACAGTGTCCCTTATGCTTC +
Preference number: 6 (lower is better)
Translates to: ANILLWLRLCCL*TMGPSQCPLCF
Trigger: GAAGCATAAGGGACACTGTGACGGTCCCATTGTCAACAGACAGCAAAGACGTAGCCACAAAAGGATATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp TTTCACCATGAGGAAGAAATTCCTTGGATTCAAGGGTaGAGGACGCATGTCCAAGGTAAAGCGCAGGAGGAT +
Preference number: 6 (lower is better)
Translates to: FHHEEEIPWIQG*RTHVQGKAQED
Trigger: ATCCTCCTGCGCTTTACCTTGGACATGCGTCCTCAACCCTTGAATCCAAGGAATTTCTTCCTCATGGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp CCTTCACCTTGGAAAACAGTCTCTAATGTCTCCAACTaGACACTAGCAGACTGTCCAGCCCCACTTCCAAAA +
Preference number: 6 (lower is better)
Translates to: PSPWKTVSNVSN*TLADCPAPLPK
Trigger: TTTTGGAAGTGGGGCTGGACAGTCTGCTAGTGTCAAGTTGGAGACATTAGAGACTGTTTTCCAAGGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp ACGAAATCGATACACTCTCCTTGGAAGCCTGCTTTACTGAATGCTTaGAGCAAGTGTGTAGGCTCATTTATCCCGAGTGGTTCCAATTGG +
Preference number: 6 (lower is better)
Translates to: TKSIHSPWKPALLNA*SKCVGSFIPSGSNW
Trigger: CCAATTGGAACCACTCGGGATAAATGAGCCTACACACTTGCTCAAAGCATTCAGTAAAGCAGGCTTCCAAGGAGAGTGTATCGATTTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 90 bp ACATCCTCTTGGGCTAGATGCTCCTGGCAGGTACCAACCGTGTGTTaGGATTTTAGTTCTTCTCTGACAGAACTTAAAATCTCCTCAGTC +
Preference number: 6 (lower is better)
Translates to: TSSWARCSWQVPTVC*DFSSSLTELKISSV
Trigger: GACTGAGGAGATTTTAAGTTCTGTCAGAGAAGAACTAAAATCCAAACACACGGTTGGTACCTGCCAGGAGCATCTAGCCCAAGAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp CAAATATCCTTTTGTGGCTACGTCTTTGCTGTCTGTTaGCAATGGGACCGTCACAGTGTCCCTTATGCTTCT +
Preference number: 6 (lower is better)
Translates to: QISFCGYVFAVC*QWDRHSVPYAS
Trigger: AGAAGCATAAGGGACACTGTGACGGTCCCATTGTCAACAGACAGCAAAGACGTAGCCACAAAAGGATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp CGGGAGTTCTTACATGACTTAAAGTTGTGGGCTCCCTaGCTGAGGCACATTCTGTTTCTTTCAAGATTTCTG +
Preference number: 6 (lower is better)
Translates to: REFLHDLKLWAP*LRHILFLSRFL
Trigger: CAGAAATCTTGAAAGAAACAGAATGTGCCTCAGGCAGGGAGCCCACAACTTTAAGTCATGTAAGAACTCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp GCTTTTCCGCAACTGTTACTTGAGAAGAGGAAATGTTaGACTGAGGAACATCTCTGGGTTCTGCCTGAGAAA +
Preference number: 6 (lower is better)
Translates to: AFPQLLLEKRKC*TEEHLWVLPEK
Trigger: TTTCTCAGGCAGAACCCAGAGATGTTCCTCAGTGCAACATTTCCTCTTCTCAAGTAACAGTTGCGGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp CTGGAGCCCTCAGGTGCAAACACATTTTTCTCCAGATaGGCATCAGAACTCAGAAAAGATGTATATACGCGT +
Preference number: 6 (lower is better)
Translates to: LEPSGANTFFSR*ASELRKDVYTR
Trigger: ACGCGTATATACATCTTTTCTGAGTTCTGATGCCCATCTGGAGAAAAATGTGTTTGCACCTGAGGGCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp ATCTTTCCAGGCCTTGGATTACACTTCAGAGTTTGTTaGTCAACGTTCTCCACATACGGACTCAGTCTGCCT +
Preference number: 6 (lower is better)
Translates to: IFPGLGLHFRVC*STFSTYGLSLP
Trigger: AGGCAGACTGAGTCCGTATGTGGAGAACGTTGACAAACAAACTCTGAAGTGTAATCCAAGGCCTGGAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 72 bp ATACACTCTCCTTGGAAGCCTGCTTTACTGAATGCTTaGAGCAAGTGTGTAGGCTCATTTATCCCGAGTGGT +
Preference number: 6 (lower is better)
Translates to: IHSPWKPALLNA*SKCVGSFIPSG
Trigger: ACCACTCGGGATAAATGAGCCTACACACTTGCTCAAAGCATTCAGTAAAGCAGGCTTCCAAGGAGAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 72 bp CAGAGGCTTCTAATGGACCTCCAAGCAAATATCCTTTaGTGGCTACGTCTTTGCTGTCTGTTGACAATGGGA +
Preference number: 6 (lower is better)
Translates to: QRLLMDLQANIL*WLRLCCLLTMG
Trigger: TCCCATTGTCAACAGACAGCAAAGACGTAGCCACAAAAGGATATTTGCTTGGAGGTCCATTAGAAGCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp TCAAATGCCTCACCCAGTTTACCTTCTTTTTCAAAATaGTGGACCAGGTCAGTTCTGCTCTCAGACCTTTCG +
Preference number: 6 (lower is better)
Translates to: SNASPSLPSFSK*WTRSVLLSDLS
Trigger: CGAAAGGTCTGAGAGCAGAACTGACCTGGTCCATCATTTTGAAAAAGAAGGTAAACTGGGTGAGGCATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 72 bp GTTCTCTTCCCTCACAATGTTCCAGAGCAAAAAGGCTaGTGGAAGGTTCTTCAAAAACATAGTCGATGGGCT +
Preference number: 6 (lower is better)
Translates to: VLFPHNVPEQKG*WKVLQKHSRWA
Trigger: AGCCCATCGACTATGTTTTTGAAGAACCTTCCATCAGCCTTTTTGCTCTGGAACATTGTGAGGGAAGAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 72 bp TTTTTACCTCACCAGGCGGTTCTTCTATTTCTCCAATaGTCTTCTCCATGTACTCCCGAGGATCCTTTGTAT +
Preference number: 6 (lower is better)
Translates to: FLPHQAVLLFLQ*SSPCTPEDPLY
Trigger: ATACAAAGGATCCTCGGGAGTACATGGAGAAGAGCATTGGAGAAATAGAAGAACCGCCTGGTGAGGTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS GCA 72 bp AGCTTTCATACTGTTCAATTCAGGGTCCACTTTACATaGCTTTTCTCTATGTGGCATAAGAGGGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SFHTVQFRVHFT*LFSMWHKRGCF
Trigger: GAAGCAGCCCCTCTTATGCCACATAGAGAAAAGGCATGTAAAGTGGACCCTGAATTGAACAGTATGAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp TTGGAGGTGCTAGGCACATGGATGTCATCCCTTGCAAAAGGCAAGTaGAAATTTAATACAAGAGTTCTAGTATCTGCTGCTGCCATCTTG +
Preference number: 6 (lower is better)
Translates to: LEVLGTWMSSLAKGK*KFNTRVLVSAAAIL
Trigger: CAAGATGGCAGCAGCAGATACTAGAACTCTTGTATTAAATTTCAACTTGCCTTTTGCAAGGGATGACATCCATGTGCCTAGCACCTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp CAGTCAATGTATCAGCTCTTTTGGGTAAACCACTTCTaGGTAAAAGTGGGTCACGTGCTCTTCTCCTTGAAT +
Preference number: 6 (lower is better)
Translates to: QSMYQLFWVNHF*VKVGHVLFSLN
Trigger: ATTCAAGGAGAAGAGCACGTGACCCACTTTTACTCAGAAGTGGTTTACCCAAAAGAGCTGATACATTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp GTGATGGGCAATTCCTCGGGTTTTTCAACATACATCTaGGCATCCATTTGGTATACACTTCCTCTTGCGAAA +
Preference number: 6 (lower is better)
Translates to: VMGNSSGFSTYI*ASIWYTLPLAK
Trigger: TTTCGCAAGAGGAAGTGTATACCAAATGGATGCTCAGATGTATGTTGAAAAACCCGAGGAATTGCCCATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp ATACATCTGAGCATCCATTTGGTATACACTTCCTCTTaGGAAAACGTTAGCCTCTGGCTCAGCTTTCATACT +
Preference number: 6 (lower is better)
Translates to: IHLSIHLVYTSS*ENVSLWLSFHT
Trigger: AGTATGAAAGCTGAGCCAGAGGCTAACGTTTTCGCAAGAGGAAGTGTATACCAAATGGATGCTCAGATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp TATCATCTTTCCAGGCCTTGGATTACACTTCAGAGTTaGTTTGTCAACGTTCTCCACATACGGACTCAGTCT +
Preference number: 6 (lower is better)
Translates to: YHLSRPWITLQS*FVNVLHIRTQS
Trigger: AGACTGAGTCCGTATGTGGAGAACGTTGACAAACAAACTCTGAAGTGTAATCCAAGGCCTGGAAAGATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 72 bp TCAGATATGCATACAAGGCTATCAGAAAAACTGTTTTaGGAGGTGCTAGGCACATGGATGTCATCCCTTGCA +
Preference number: 6 (lower is better)
Translates to: SDMHTRLSEKLF*EVLGTWMSSLA
Trigger: TGCAAGGGATGACATCCATGTGCCTAGCACCTCCAAAAACAGTTTTTCTGATAGCCTTGTATGCATATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp TCTCTGACAGAACTTAAAATCTCCTCAGTCAATGTATCAGCTCTTTaGGGTAAACCACTTCTGAGTAAAAGTGGGTCACGTGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: SLTELKISSVNVSAL*GKPLLSKSGSRALL
Trigger: GAGAAGAGCACGTGACCCACTTTTACTCAGAAGTGGTTTACCCAAAAGAGCTGATACATTGACTGAGGAGATTTTAAGTTCTGTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp TTCAAAAACCAAGTGTGTAGGCTCATTTATCCCGAGTaGTTCCAATTGGATTGGTCGGATAGACAAGATTGT +
Preference number: 6 (lower is better)
Translates to: FKNQVCRLIYPE*FQLDWSDRQDC
Trigger: ACAATCTTGTCTATCCGACCAATCCAATTGGAACCACTCGGGATAAATGAGCCTACACACTTGGTTTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232544.2
CDS CAA 90 bp AGATTTCTCCTCTTGTCATATACTACAGGGACAGACATTATTTTCTaGAGCCTTACTACTGTGTCCTCCTCTTGGACATCTGGTATTGCT +
Preference number: 6 (lower is better)
Translates to: RFLLLSYTTGTDIIF*SLTTVSSSWTSGIA
Trigger: AGCAATACCAGATGTCCAAGAGGAGGACACAGTAGTAAGGCTCAAGAAAATAATGTCTGTCCCTGTAGTATATGACAAGAGGAGAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 90 bp CTAACATCCAAGAGCTATTCCCTCTATCAAAATCAAAAAGGAGACTaGTCTCACCAACTGCAGATGAAACACTGGTCTCTTCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: LTSKSYSLYQNQKGD*SHQLQMKHWSLLPL
Trigger: AAGAGGAAGAAGAGACCAGTGTTTCATCTGCAGTTGGTGAGACAAGTCTCCTTTTTGATTTTGATAGAGGGAATAGCTCTTGGATGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp TTCAGCACGTTTTTGATAAAAACTTTCCATCTCAATTaGAATAGGTGCCACCTCGGTCTTTACGATAGCTCC +
Preference number: 6 (lower is better)
Translates to: FSTFLIKTFHLN*NRCHLGLYDSS
Trigger: GGAGCTATCGTAAAGACCGAGGTGGCACCTATTTCAATTGAGATGGAAAGTTTTTATCAAAAACGTGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS GCA 72 bp TCACCACACTTATGCTCTGGCAACCGTGCATCTTCATaGCTAATTGATTTATGTGGACTTGACAAATTTGTA +
Preference number: 6 (lower is better)
Translates to: SPHLCSGNRASS*LIDLCGLDKFV
Trigger: TACAAATTTGTCAAGTCCACATAAATCAATTAGGCATGAAGATGCACGGTTGCCAGAGCATAAGTGTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CCA 72 bp AAGTGTGTAGGCTCATTTATCCCGAGTGGTTCCAATTaGATTGGTCGGATAGACAAGATTGTATTACTTGAT +
Preference number: 6 (lower is better)
Translates to: KCVGSFIPSGSN*IGRIDKIVLLD
Trigger: ATCAAGTAATACAATCTTGTCTATCCGACCAATCCAATTGGAACCACTCGGGATAAATGAGCCTACACACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
ENSMUST00000232544.2
CDS CCA 72 bp CAATTCAGGGTCCACTTTACATGCCTTTTCTCTATGTaGCATAAGAGGGGCTGCTTCATGTTTCATAATATT +
Preference number: 6 (lower is better)
Translates to: QFRVHFTCLFSM*HKRGCFMFHNI
Trigger: AATATTATGAAACATGAAGCAGCCCCTCTTATGCCACATAGAGAAAAGGCATGTAAAGTGGACCCTGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp GATTTATGTGGACTTGACAAATTTGTACTTTCCATTTaGGTAGTGTCACTCCCATCAGATTTACTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: DLCGLDKFVLSI*VVSLPSDLLRE
Trigger: CTCCCGCAGTAAATCTGATGGGAGTGACACTACCAAAATGGAAAGTACAAATTTGTCAAGTCCACATAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp GAACTTAAAATCTCCTCAGTCAATGTATCAGCTCTTTaGGGTAAACCACTTCTGAGTAAAAGTGGGTCACGT +
Preference number: 6 (lower is better)
Translates to: ELKISSVNVSAL*GKPLLSKSGSR
Trigger: ACGTGACCCACTTTTACTCAGAAGTGGTTTACCCAAAAGAGCTGATACATTGACTGAGGAGATTTTAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 72 bp AAGAGCTATTCCCTCTATCAAAATCAAAAAGGAGACTaGTCTCACCAACTGCAGATGAAACACTGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: KSYSLYQNQKGD*SHQLQMKHWSL
Trigger: AAGAGACCAGTGTTTCATCTGCAGTTGGTGAGACAAGTCTCCTTTTTGATTTTGATAGAGGGAATAGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp AGGTACCAACCGTGTGTTTGGATTTTAGTTCTTCTCTaGCAGAACTTAAAATCTCCTCAGTCAATGTATCAG +
Preference number: 6 (lower is better)
Translates to: RYQPCVWILVLL*QNLKSPQSMYQ
Trigger: CTGATACATTGACTGAGGAGATTTTAAGTTCTGTCAGAGAAGAACTAAAATCCAAACACACGGTTGGTACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS TCA 72 bp AATACAAGAGTTCTAGTATCTGCTGCTGCCATCTTGTaGTTATCCACACACTCTGTTTCTGCTACCTTTTTA +
Preference number: 6 (lower is better)
Translates to: NTRVLVSAAAIL*LSTHSVSATFL
Trigger: TAAAAAGGTAGCAGAAACAGAGTGTGTGGATAATCACAAGATGGCAGCAGCAGATACTAGAACTCTTGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172910.3
CDS CAA 90 bp AAGTTGGACTCTTCCTTTTCTTCTCTACAATCCAGATTTCTCCTCTaGTCATATACTACAGGGACAGACATTATTTTCTTGAGCCTTACT +
Preference number: 6 (lower is better)
Translates to: KLDSSFSSLQSRFLL*SYTTGTDIIFLSLT
Trigger: AGTAAGGCTCAAGAAAATAATGTCTGTCCCTGTAGTATATGACAAGAGGAGAAATCTGGATTGTAGAGAAGAAAAGGAAGAGTCCAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS TCA 72 bp CGTGATGTCAATAAACTTCCCACTTTCCAGGTGAGATaGTTCAAACAGTGTGATCGAAGATTCTATAAAATT +
Preference number: 6 (lower is better)
Translates to: RDVNKLPTFQVR*FKQCDRRFYKI
Trigger: AATTTTATAGAATCTTCGATCACACTGTTTGAATCATCTCACCTGGAAAGTGGGAAGTTTATTGACATCACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3
CDS CAA 72 bp TCTTCCTTTTCTTCTCTACAATCCAGATTTCTCCTCTaGTCATATACTACAGGGACAGACATTATTTTCTTG +
Preference number: 6 (lower is better)
Translates to: SSFSSLQSRFLL*SYTTGTDIIFL
Trigger: CAAGAAAATAATGTCTGTCCCTGTAGTATATGACAAGAGGAGAAATCTGGATTGTAGAGAAGAAAAGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044604.16
ENSMUST00000172910.3