Pregenerated sensors for CRYBB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029343Ensembl transcript IDs: ENSMUST00000031286.13, ENSMUST00000112375.2, ENSMUST00000131673.8
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGGGCTGGCCCTGTGGATaGGGCCCCTTTTCCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: IGYKNFISRGRWDVRQGGGWPCG*GPFSLA Trigger: GGCAAGGGAAAAGGGGCCCCATCCACAGGGCCAGCC...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR CCA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGCCTGGGCACAGAAGCTaGGACAGGAGTGGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IGYKNFISRGRWDVRQGGPGHRS*DRSGAR Trigger: CCTGGCCCCACTCCTGTCCCAGCTTCTGTGCCCAGG...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR TCA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGTGGGCCGGAAGGACATaGGCCGGTCACTGCGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: IGYKNFISRGRWDVRQGGWAGRT*AGHCGN Trigger: GTTACCGCAGTGACCGGCTCATGTCCTTCCGGCCCA...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR GCA 90 bp | AGTATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCCGCACAGCCTGCATCTaGGGCTGGAAGGCGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SIGYKNFISRGRWDVRQGRTACI*GWKAPH Trigger: GTGGGGCGCCTTCCAGCCGCAGATGCAGGCTGTGCG...GCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR CCA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGCTTGCCATCAGGCCCTaGGTTCACCGCTGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: IGYKNFISRGRWDVRQGGLAIRP*VHRCGG Trigger: GCCACCACAGCGGTGAACCCAGGGCCTGATGGCAAG...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR CCA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGCCAGGTGTCCCAGCGTaGGTACTCGCCCTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IGYKNFISRGRWDVRQGGPGVPA*VLALLQ Trigger: CTGGAGAAGGGCGAGTACCCACGCTGGGACACCTGG...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR CCA 90 bp | AGTATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGAAGCAGCCCTCTTaGTGCCACTGGCGGTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: SIGYKNFISRGRWDVRQGGKQPS*CHWRSR Trigger: GCGGGACCGCCAGTGGCACCAAGAGGGCTGCTTCCC...GCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR TCA 90 bp | AGTATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCCACCGCTGTGGTGGCTaGAGCCTTGGCAGCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SIGYKNFISRGRWDVRQGHRCGG*SLGSLG Trigger: TCCCAGGCTGCCAAGGCTTCAGCCACCACAGCGGTG...GCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR GCA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGGGGCCCCTTTTCCCTTaGCATCAGGCCCTGGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: IGYKNFISRGRWDVRQGGGPLFP*HQALGS Trigger: TGAACCCAGGGCCTGATGGCAAGGGAAAAGGGGCCC...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR TCA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGCCATGGTGTTGCCCTTaGAGTTGGCCCCTTCGAACA | + |
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Preference number: 4 (lower is better) Translates to: IGYKNFISRGRWDVRQGGPWCCP*SWPLRT Trigger: TGTTCGAAGGGGCCAACTTCAAGGGCAACACCATGG...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR CCA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGCAGATCTTATGTTCCTaGGAATCCATCCTGATGGGC | + |
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Preference number: 4 (lower is better) Translates to: IGYKNFISRGRWDVRQGGQILCS*ESILMG Trigger: GCCCATCAGGATGGATTCCCAGGAACATAAGATCTG...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR CCA 90 bp | AGTATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGCACATCATCCTCTTaGATCTCCATGGTGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SIGYKNFISRGRWDVRQGGTSSS*ISMVLP Trigger: GGGCAACACCATGGAGATCCAAGAGGATGATGTGCC...GCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS CCA 90 bp | TGCCACTGGCGGTCCCGCAGGCGCCGCACAGCCTGCATCTGCGGCTaGAAGGCGCCCCACTCGTTCCAGTGCCGGAAGTCGCCAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CHWRSRRRRTACICG*KAPHSFQCRKSPGS Trigger: GGAGCCTGGCGACTTCCGGCACTGGAACGAGTGGGGCGCCTTCCAGCCGCAGATGCAGGCTGTGCGGCGCCTGCGGGACCGCCAGTGGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS CCA 90 bp | GGGGGCTCGGCTGTCAGCACCGGGAAGCAGCCCTCTTGGTGCCACTaGCGGTCCCGCAGGCGCCGCACAGCCTGCATCTGCGGCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GGSAVSTGKQPSWCH*RSRRRRTACICGWK Trigger: CTTCCAGCCGCAGATGCAGGCTGTGCGGCGCCTGCGGGACCGCCAGTGGCACCAAGAGGGCTGCTTCCCGGTGCTGACAGCCGAGCCCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 |
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| CDS CCA 90 bp | CGAAGACGATCAGCCTGTAGCTCCCAGGAGGCAGGTCCCCTACTTTaGCAGCGGGCCTGGGCACAGAAGCTGGGACAGGAGTGGGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRRSACSSQEAGPLL*QRAWAQKLGQEWGQ Trigger: CTGGCCCCACTCCTGTCCCAGCTTCTGTGCCCAGGCCCGCTGCCAAAGTAGGGGACCTGCCTCCTGGGAGCTACAGGCTGATCGTCTTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS GCA 90 bp | CAGATTGCTCAAAGGCCACCCAGGGTCCCGAGACGACGATCAGGCTaGGCACTCTGTCGAAGCCACGGTCCCCCAGATTCAGGCACTCCC | + |
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Preference number: 5 (lower is better) Translates to: QIAQRPPRVPRRRSG*ALCRSHGPPDSGTP Trigger: GGGAGTGCCTGAATCTGGGGGACCGTGGCTTCGACAGAGTGCGCAGCCTGATCGTCGTCTCGGGACCCTGGGTGGCCTTTGAGCAATCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS GCA 90 bp | CTGGGTACTGGTAGCCGACCCATGTGCCACCAGAGACGGTTATGCTaGCCACACGGTCACAGAAGCCATAAACCCAGAGGCTGGGCACAT | + |
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Preference number: 5 (lower is better) Translates to: LGTGSRPMCHQRRLC*PHGHRSHKPRGWAH Trigger: ATGTGCCCAGCCTCTGGGTTTATGGCTTCTGTGACCGTGTGGGCAGCATAACCGTCTCTGGTGGCACATGGGTCGGCTACCAGTACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS-3UTR CAA 90 bp | AGTATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCCGGGAAGCAGCCCTCTaGGTGCCACTGGCGGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: SIGYKNFISRGRWDVRQGREAAL*VPLAVP Trigger: CGGGACCGCCAGTGGCACCAAGAGGGCTGCTTCCCG...GCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGATACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR CAA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGGTGTTGCCCTTGAAGTaGGCCCCTTCGAACAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: IGYKNFISRGRWDVRQGGVLPLK*APSNRQ Trigger: CTGCCTGTTCGAAGGGGCCAACTTCAAGGGCAACAC...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR CAA 90 bp | AGTATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCTCCACGGAAGGCAGATaGCTCAAAGGCCACCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SIGYKNFISRGRWDVRQGSTEGR*LKGHPG Trigger: CCCTGGGTGGCCTTTGAGCAATCTGCCTTCCGTGGA...GCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS-3UTR CAA 90 bp | ATCGGCTATAAGAACTTTATTAGTAGGGGAAGATGGGACGTGAGGCAGGGCGGGTCCATGGTGTTGCCCTaGAAGTTGGCCCCTTCGAAC | + |
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Preference number: 5 (lower is better) Translates to: IGYKNFISRGRWDVRQGGSMVLP*KLAPSN Trigger: GTTCGAAGGGGCCAACTTCAAGGGCAACACCATGGA...CCCGCCCTGCCTCACGTCCCATCTTCCCCTACTAATAAAGTTCTTATAGCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031286.13 |
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| CDS TCA 90 bp | AGAGGCTGGGCACATCATCCTCTTGGATCTCCATGGTGTTGCCCTTaGAGTTGGCCCCTTCGAACAGGCAGATCTTATGTTCCTGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: RGWAHHPLGSPWCCP*SWPLRTGRSYVPGN Trigger: ATTCCCAGGAACATAAGATCTGCCTGTTCGAAGGGGCCAACTTCAAGGGCAACACCATGGAGATCCAAGAGGATGATGTGCCCAGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS GCA 72 bp | CACTGGCGGTCCCGCAGGCGCCGCACAGCCTGCATCTaGGGCTGGAAGGCGCCCCACTCGTTCCAGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: HWRSRRRRTACI*GWKAPHSFQCR Trigger: CCGGCACTGGAACGAGTGGGGCGCCTTCCAGCCGCAGATGCAGGCTGTGCGGCGCCTGCGGGACCGCCAGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS CCA 72 bp | CGGTCCCGCAGGCGCCGCACAGCCTGCATCTGCGGCTaGAAGGCGCCCCACTCGTTCCAGTGCCGGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: RSRRRRTACICG*KAPHSFQCRKS Trigger: CGACTTCCGGCACTGGAACGAGTGGGGCGCCTTCCAGCCGCAGATGCAGGCTGTGCGGCGCCTGCGGGACCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS CCA 72 bp | GCTGTCAGCACCGGGAAGCAGCCCTCTTGGTGCCACTaGCGGTCCCGCAGGCGCCGCACAGCCTGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: AVSTGKQPSWCH*RSRRRRTACIC Trigger: GCAGATGCAGGCTGTGCGGCGCCTGCGGGACCGCCAGTGGCACCAAGAGGGCTGCTTCCCGGTGCTGACAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 |
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| CDS CCA 72 bp | TCCCAGGAGGCAGGTCCCCTACTTTGGCAGCGGGCCTaGGCACAGAAGCTGGGACAGGAGTGGGGCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SQEAGPLLWQRA*AQKLGQEWGQG Trigger: CCCCTGGCCCCACTCCTGTCCCAGCTTCTGTGCCCAGGCCCGCTGCCAAAGTAGGGGACCTGCCTCCTGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS CCA 72 bp | TCAGCCTGTAGCTCCCAGGAGGCAGGTCCCCTACTTTaGCAGCGGGCCTGGGCACAGAAGCTGGGACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SACSSQEAGPLL*QRAWAQKLGQE Trigger: CTCCTGTCCCAGCTTCTGTGCCCAGGCCCGCTGCCAAAGTAGGGGACCTGCCTCCTGGGAGCTACAGGCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS GCA 72 bp | CAAAGGCCACCCAGGGTCCCGAGACGACGATCAGGCTaGGCACTCTGTCGAAGCCACGGTCCCCCAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: QRPPRVPRRRSG*ALCRSHGPPDS Trigger: TGAATCTGGGGGACCGTGGCTTCGACAGAGTGCGCAGCCTGATCGTCGTCTCGGGACCCTGGGTGGCCTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS GCA 72 bp | TTCTCCAGGACAAACATCTCTCCACGGAAGGCAGATTaGTCAAAGGCCACCCAGGGTCCCGAGACGACGATC | + |
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Preference number: 6 (lower is better) Translates to: FSRTNISPRKAD*SKATQGPETTI Trigger: GATCGTCGTCTCGGGACCCTGGGTGGCCTTTGAGCAATCTGCCTTCCGTGGAGAGATGTTTGTCCTGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS CAA 72 bp | CTTCTCCAGGACAAACATCTCTCCACGGAAGGCAGATaGCTCAAAGGCCACCCAGGGTCCCGAGACGACGAT | + |
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Preference number: 6 (lower is better) Translates to: LLQDKHLSTEGR*LKGHPGSRDDD Trigger: ATCGTCGTCTCGGGACCCTGGGTGGCCTTTGAGCAATCTGCCTTCCGTGGAGAGATGTTTGTCCTGGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS CAA 90 bp | CAGAGGCTGGGCACATCATCCTCTTGGATCTCCATGGTGTTGCCCTaGAAGTTGGCCCCTTCGAACAGGCAGATCTTATGTTCCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: QRLGTSSSWISMVLP*KLAPSNRQILCSWE Trigger: TTCCCAGGAACATAAGATCTGCCTGTTCGAAGGGGCCAACTTCAAGGGCAACACCATGGAGATCCAAGAGGATGATGTGCCCAGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS CAA 90 bp | CTGGGCACATCATCCTCTTGGATCTCCATGGTGTTGCCCTTGAAGTaGGCCCCTTCGAACAGGCAGATCTTATGTTCCTGGGAATCCATC | + |
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Preference number: 6 (lower is better) Translates to: LGTSSSWISMVLPLK*APSNRQILCSWESI Trigger: GATGGATTCCCAGGAACATAAGATCTGCCTGTTCGAAGGGGCCAACTTCAAGGGCAACACCATGGAGATCCAAGAGGATGATGTGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS CAA 72 bp | TCATCCTCTTGGATCTCCATGGTGTTGCCCTTGAAGTaGGCCCCTTCGAACAGGCAGATCTTATGTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSWISMVLPLK*APSNRQILCSW Trigger: CCAGGAACATAAGATCTGCCTGTTCGAAGGGGCCAACTTCAAGGGCAACACCATGGAGATCCAAGAGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS CAA 72 bp | GGCACATCATCCTCTTGGATCTCCATGGTGTTGCCCTaGAAGTTGGCCCCTTCGAACAGGCAGATCTTATGT | + |
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Preference number: 6 (lower is better) Translates to: GTSSSWISMVLP*KLAPSNRQILC Trigger: ACATAAGATCTGCCTGTTCGAAGGGGCCAACTTCAAGGGCAACACCATGGAGATCCAAGAGGATGATGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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| CDS TCA 72 bp | GCACATCATCCTCTTGGATCTCCATGGTGTTGCCCTTaGAGTTGGCCCCTTCGAACAGGCAGATCTTATGTT | + |
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Preference number: 6 (lower is better) Translates to: AHHPLGSPWCCP*SWPLRTGRSYV Trigger: AACATAAGATCTGCCTGTTCGAAGGGGCCAACTTCAAGGGCAACACCATGGAGATCCAAGAGGATGATGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031286.13 ENSMUST00000112375.2 ENSMUST00000131673.8 |
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