Pregenerated sensors for CRYBA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066975Ensembl transcript IDs: ENSMUST00000086629.6, ENSMUST00000112383.8, ENSMUST00000112385.8
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGCAGGCCGGAAGGAGGTaGGCCTCTCCGCAGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LAGHGLADRDVGFPEDTRQAGRR*ASPQGR Trigger: CCTACCCTGCGGAGAGGCTCACCTCCTTCCGGCCTG...CCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | GGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCCAGGCCGGAAGGAGGTaGGCCTCTCCGCAGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GHGLADRDVGFPEDTRVAQAGRR*ASPQGR Trigger: CCTACCCTGCGGAGAGGCTCACCTCCTTCCGGCCTG...GGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | AGCTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGCAGGGTAGGCTGTGTTaGCACCCCAGGCATCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSMSWRGMGWLTGMWGSQQGRLC*HPRHPS Trigger: GCTGGGATGCCTGGGGTGGCAACACAGCCTACCCTG...CTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | CTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGCAGGGTAGGCTGTGTTaGCACCCCAGGCATCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LAGHGLADRDVGFPEDTRQGRLC*HPRHPS Trigger: GCTGGGATGCCTGGGGTGGCAACACAGCCTACCCTG...CCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | AGCTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGCCTCCAGTGTCCAGCTaGCTTGGTGCACTGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SSMSWRGMGWLTGMWGSQPPVSS*LGALQG Trigger: ACCCTGCAGTGCACCAAGTCAGCTGGACACTGGAGG...CTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | CATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCAGACAGGCCGGAAGGAGGTaGGCCTCTCCGCAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGLADRDVGFPEDTRVARQAGRR*ASPQGR Trigger: CCTACCCTGCGGAGAGGCTCACCTCCTTCCGGCCTG...TCTGGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | CTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGTGCACCTGGAAGGTGTaGGCATGGGAGCCCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: LAGHGLADRDVGFPEDTRCTWKV*AWEPHS Trigger: AGAGTGGGGCTCCCATGCTCACACCTTCCAGGTGCA...CCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | TCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGTGCACCTGGAAGGTGTaGGCATGGGAGCCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SMSWRGMGWLTGMWGSQRCTWKV*AWEPHS Trigger: AGAGTGGGGCTCCCATGCTCACACCTTCCAGGTGCA...CCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | CTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGCCTTGGAAGCCGGCGTaGTCAAAGCCTACCCACGCT | + |
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Preference number: 4 (lower is better) Translates to: LAGHGLADRDVGFPEDTRPWKPA*SKPTHA Trigger: AGCGTGGGTAGGCTTTGAGCACGCCGGCTTCCAAGG...CCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | CTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGCCTTGGAAGCCGGCGTaGTCAAAGCCTACCCACGCT | + |
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Preference number: 4 (lower is better) Translates to: LHELAGHGLADRDVGFPEPWKPA*SKPTHA Trigger: AGCGTGGGTAGGCTTTGAGCACGCCGGCTTCCAAGG...CTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | GAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAGAAGATGGTCAGCCTTaGGTCGCGGTGGTTAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELAGHGLADRDVGFPEDTEDGQP*VAVVSA Trigger: TGCGCTAACCACCGCGACTCAAGGCTGACCATCTTC...TGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | CTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGAAGATGGTCAGCCTTaGGTCGCGGTGGTTAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LAGHGLADRDVGFPEDTREDGQP*VAVVSA Trigger: TGCGCTAACCACCGCGACTCAAGGCTGACCATCTTC...CCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | GAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAACCCACGCCCCAGATTaGACATGGAAGGAGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: ELAGHGLADRDVGFPEDTTHAPD*TWKEPT Trigger: AGTGGGCTCCTTCCATGTTCAATCTGGGGCGTGGGT...TGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | GAGCTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAACCCACGCCCCAGATTaGACATGGAAGGAGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: ELHELAGHGLADRDVGFPTHAPD*TWKEPT Trigger: AGTGGGCTCCTTCCATGTTCAATCTGGGGCGTGGGT...TGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | CTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGACCCACGCCCCAGATTaGACATGGAAGGAGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LHELAGHGLADRDVGFPETHAPD*TWKEPT Trigger: AGTGGGCTCCTTCCATGTTCAATCTGGGGCGTGGGT...CTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | TTGAGCTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCTGCACCTGGAAGGTGTaGGCATGGGAGCCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSMSWRGMGWLTGMWGSCTWKV*AWEPHS Trigger: AGAGTGGGGCTCCCATGCTCACACCTTCCAGGTGCA...GGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAGCTCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | CTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGTCAGCTGTGAATTCATaGCGTCGGCCCTGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LHELAGHGLADRDVGFPESAVNS*RRPWKP Trigger: AGGCTTCCAGGGCCGACGGCATGAATTCACAGCTGA...CTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | TCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGCTCTCCAGCACATATTaGTGTCCTTGGAAGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SMSWRGMGWLTGMWGSQRLSSTY*CPWKPA Trigger: CGCCGGCTTCCAAGGACAGCAATATGTGCTGGAGAG...CCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | CATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCAGACAGGGTAGGCTGTGTTaGCACCCCAGGCATCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HGLADRDVGFPEDTRVARQGRLC*HPRHPS Trigger: GCTGGGATGCCTGGGGTGGCAACACAGCCTACCCTG...TCTGGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | CTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGTCAGCTCGCCTTTCCTaGCCAGGAAGTTCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHELAGHGLADRDVGFPESARLS*PGSSPA Trigger: AGCAGGAGAACTTCCTGGGCAGGAAAGGCGAGCTGA...CTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | GAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACATCAGCTCGCCTTTCCTaGCCAGGAAGTTCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ELAGHGLADRDVGFPEDTSARLS*PGSSPA Trigger: AGCAGGAGAACTTCCTGGGCAGGAAAGGCGAGCTGA...TGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR CCA 90 bp | CTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGTCTCCTGCTCGAAGATaGTCAGCCTTGAGTCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LAGHGLADRDVGFPEDTRSPARR*SALSRG Trigger: ACCGCGACTCAAGGCTGACCATCTTCGAGCAGGAGA...CCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR CCA 90 bp | CTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGTCTCCTGCTCGAAGATaGTCAGCCTTGAGTCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LHELAGHGLADRDVGFPESPARR*SALSRG Trigger: ACCGCGACTCAAGGCTGACCATCTTCGAGCAGGAGA...CTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR CCA 90 bp | AGCTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGTCTCCTGCTCGAAGATaGTCAGCCTTGAGTCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SSMSWRGMGWLTGMWGSQSPARR*SALSRG Trigger: ACCGCGACTCAAGGCTGACCATCTTCGAGCAGGAGA...CTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | CATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCAGACCTCCAGTGTCCAGCTaGCTTGGTGCACTGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: HGLADRDVGFPEDTRVARPPVSS*LGALQG Trigger: ACCCTGCAGTGCACCAAGTCAGCTGGACACTGGAGG...TCTGGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086629.6 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | GGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCTCAGCTGTGAATTCATaGCGTCGGCCCTGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GHGLADRDVGFPEDTRVASAVNS*RRPWKP Trigger: AGGCTTCCAGGGCCGACGGCATGAATTCACAGCTGA...GGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | TTGAGCTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCTCTCCAGCACATATTaGTGTCCTTGGAAGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: LSSMSWRGMGWLTGMWGSLSSTY*CPWKPA Trigger: CGCCGGCTTCCAAGGACAGCAATATGTGCTGGAGAG...GGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAGCTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | GGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCTCAGCTCGCCTTTCCTaGCCAGGAAGTTCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GHGLADRDVGFPEDTRVASARLS*PGSSPA Trigger: AGCAGGAGAACTTCCTGGGCAGGAAAGGCGAGCTGA...GGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR TCA 90 bp | CATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCAGAGAAGATGGTCAGCCTTaGGTCGCGGTGGTTAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: HGLADRDVGFPEDTRVAREDGQP*VAVVSA Trigger: TGCGCTAACCACCGCGACTCAAGGCTGACCATCTTC...TCTGGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | GGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCCCCAGGAAGTTCTCCTaGTCGAAGATGGTCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GHGLADRDVGFPEDTRVAPRKFS*SKMVSL Trigger: AAGGCTGACCATCTTCGAGCAGGAGAACTTCCTGGG...GGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | TTGAGCTCCATGAGCTGGCGGGGCATGGGCTGGCTGACAGGGATGTGGGGTTCCCCCAGGAAGTTCTCCTaGTCGAAGATGGTCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSSMSWRGMGWLTGMWGSPRKFS*SKMVSL Trigger: AAGGCTGACCATCTTCGAGCAGGAGAACTTCCTGGG...GGAACCCCACATCCCTGTCAGCCAGCCCATGCCCCGCCAGCTCATGGAGCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | CATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCAGATCAGCTGTGAATTCATaGCGTCGGCCCTGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: HGLADRDVGFPEDTRVARSAVNS*RRPWKP Trigger: AGGCTTCCAGGGCCGACGGCATGAATTCACAGCTGA...TCTGGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS-3UTR GCA 90 bp | CATGGGCTGGCTGACAGGGATGTGGGGTTCCCAGAGGACACAAGGGTAGCCAGACTCTCCAGCACATATTaGTGTCCTTGGAAGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: HGLADRDVGFPEDTRVARLSSTY*CPWKPA Trigger: CGCCGGCTTCCAAGGACAGCAATATGTGCTGGAGAG...TCTGGCTACCCTTGTGTCCTCTGGGAACCCCACATCCCTGTCAGCCAGCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS TCA 90 bp | GGAAGCCGGCGTGCTCAAAGCCTACCCACGCTCCGCTCAGGACTTTaGGAGATCGCACCGTCTCAAAACCAAGTTCCAGGACACTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: GSRRAQSLPTLRSGL*EIAPSQNQVPGHWD Trigger: GTCCCAGTGTCCTGGAACTTGGTTTTGAGACGGTGCGATCTCTCAAAGTCCTGAGCGGAGCGTGGGTAGGCTTTGAGCACGCCGGCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS GCA 90 bp | CCATGGCCTGCAGAGAGGGATAGTCATCGTTCAGCTCGCCTTTCCTaGCCAGGAAGTTCTCCTGCTCGAAGATGGTCAGCCTTGAGTCGC | + |
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Preference number: 5 (lower is better) Translates to: PWPAERDSHRSARLS*PGSSPARRWSALSR Trigger: GCGACTCAAGGCTGACCATCTTCGAGCAGGAGAACTTCCTGGGCAGGAAAGGCGAGCTGAACGATGACTATCCCTCTCTGCAGGCCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS CCA 90 bp | CAGATTGAACATGGAAGGAGCCCACTTCAGTGCCGTCCCAGCCCATaGCCTGCAGAGAGGGATAGTCATCGTTCAGCTCGCCTTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: QIEHGRSPLQCRPSP*PAERDSHRSARLSC Trigger: GCAGGAAAGGCGAGCTGAACGATGACTATCCCTCTCTGCAGGCCATGGGCTGGGACGGCACTGAAGTGGGCTCCTTCCATGTTCAATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS CAA 90 bp | ATCCCAGCCCGGGTAATCGCCCCTCTCCAGCACATATTGCTGTCCTaGGAAGCCGGCGTGCTCAAAGCCTACCCACGCTCCGCTCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: IPARVIAPLQHILLS*EAGVLKAYPRSAQD Trigger: GTCCTGAGCGGAGCGTGGGTAGGCTTTGAGCACGCCGGCTTCCAAGGACAGCAATATGTGCTGGAGAGGGGCGATTACCCGGGCTGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS TCA 72 bp | GCCCAGGAAGTTCTCCTGCTCGAAGATGGTCAGCCTTaGGTCGCGGTGGTTAGCGCAGGCCACAGGCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: AQEVLLLEDGQP*VAVVSAGHRPE Trigger: TTCCGGCCTGTGGCCTGCGCTAACCACCGCGACTCAAGGCTGACCATCTTCGAGCAGGAGAACTTCCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS CAA 72 bp | CGGGTAATCGCCCCTCTCCAGCACATATTGCTGTCCTaGGAAGCCGGCGTGCTCAAAGCCTACCCACGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RVIAPLQHILLS*EAGVLKAYPRS Trigger: GGAGCGTGGGTAGGCTTTGAGCACGCCGGCTTCCAAGGACAGCAATATGTGCTGGAGAGGGGCGATTACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS CAA 72 bp | ATCCCAGCCCGGGTAATCGCCCCTCTCCAGCACATATaGCTGTCCTTGGAAGCCGGCGTGCTCAAAGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: IPARVIAPLQHI*LSLEAGVLKAY Trigger: GTAGGCTTTGAGCACGCCGGCTTCCAAGGACAGCAATATGTGCTGGAGAGGGGCGATTACCCGGGCTGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS CAA 90 bp | TGGAAGCCGGCGTGCTCAAAGCCTACCCACGCTCCGCTCAGGACTTaGAGAGATCGCACCGTCTCAAAACCAAGTTCCAGGACACTGGGA | + |
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Preference number: 6 (lower is better) Translates to: WKPACSKPTHAPLRT*RDRTVSKPSSRTLG Trigger: TCCCAGTGTCCTGGAACTTGGTTTTGAGACGGTGCGATCTCTCAAAGTCCTGAGCGGAGCGTGGGTAGGCTTTGAGCACGCCGGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS CAA 90 bp | AAAACCTCGGTAGCCAGGAAACTGGGAACAAACCCACGCCCCAGATaGAACATGGAAGGAGCCCACTTCAGTGCCGTCCCAGCCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: KTSVARKLGTNPRPR*NMEGAHFSAVPAHG Trigger: GCCATGGGCTGGGACGGCACTGAAGTGGGCTCCTTCCATGTTCAATCTGGGGCGTGGGTTTGTTCCCAGTTTCCTGGCTACCGAGGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS GCA 72 bp | CTCTCCAGCACATATTGCTGTCCTTGGAAGCCGGCGTaGTCAAAGCCTACCCACGCTCCGCTCAGGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: LSSTYCCPWKPA*SKPTHAPLRTL Trigger: CAAAGTCCTGAGCGGAGCGTGGGTAGGCTTTGAGCACGCCGGCTTCCAAGGACAGCAATATGTGCTGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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| CDS GCA 72 bp | GCAGAGAGGGATAGTCATCGTTCAGCTCGCCTTTCCTaGCCAGGAAGTTCTCCTGCTCGAAGATGGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AERDSHRSARLS*PGSSPARRWSA Trigger: GGCTGACCATCTTCGAGCAGGAGAACTTCCTGGGCAGGAAAGGCGAGCTGAACGATGACTATCCCTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086629.6 ENSMUST00000112383.8 ENSMUST00000112385.8 |
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