Pregenerated sensors for CRYBA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006546Ensembl transcript IDs: ENSMUST00000006721.3, ENSMUST00000133833.3
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGCATGCTCAGAACCCGCTGGTCTTTGGTGCTGTCCGTGGTGCTaGTGCAGGGATAGGTCCACAAATGCCACTACCACCCACCCAAGA | + |
|
Preference number: 1 (lower is better) Translates to: PACSEPAGLWCCPWC*CRDRSTNATTTHPR Trigger: TCTTGGGTGGGTGGTAGTGGCATTTGTGGACCTATCCCTGCATCAGCACCACGGACAGCACCAAAGACCAGCGGGTTCTGAGCATGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 90 bp | TTCCCCCTCAAACAGTGTCACGCGGCTGTCGCTGTGGTTCTGTGGTaGATTGAAACAGAAGGACCCCAGCATGCTCAGAACCCGCTGGTC | + |
|
Preference number: 1 (lower is better) Translates to: FPLKQCHAAVAVVLW*IETEGPQHAQNPLV Trigger: GACCAGCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGCGACAGCCGCGTGACACTGTTTGAGGGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR TCA 90 bp | CCTCAAACAGTGTCACGCGGCTGTCGCTGTGGTTCTGTGGTGGATTaGAACAGAAGGACCCCAGCATGCTCAGAACCCGCTGGTCTTTGG | + |
|
Preference number: 1 (lower is better) Translates to: PQTVSRGCRCGSVVD*NRRTPACSEPAGLW Trigger: CCAAAGACCAGCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGCGACAGCCGCGTGACACTGTTTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 90 bp | CTGTCCCTGGAAGTCGGGGTACTCGAAGGCCACCCATCTTTGTCTTaGGGAGGGGTTGGGAGTACTGGAGAGGACAAAGATTTCTCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: LSLEVGVLEGHPSLS*GGVGSTGEDKDFSP Trigger: AGGAGAGAAATCTTTGTCCTCTCCAGTACTCCCAACCCCTCCCCAAGACAAAGATGGGTGGCCTTCGAGTACCCCGACTTCCAGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 90 bp | GGGTGGTGGTGGGTGGGTAGGTATTTCAAAGCAACTCACTTTGGTTaGGACCTGGAGCTTGGTGGCAGGAGATCAGAGGTTGGGGTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: GWWWVGRYFKATHFG*DLELGGRRSEVGVC Trigger: ACACACCCCAACCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAACCAAAGTGAGTTGCTTTGAAATACCTACCCACCCACCACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 90 bp | ACTCGAAGGCCACCCATCTTTGTCTTGGGGAGGGGTTGGGAGTACTaGAGAGGACAAAGATTTCTCTCCTTGATGAGTCTGTCTACGGCG | + |
|
Preference number: 1 (lower is better) Translates to: TRRPPIFVLGRGWEY*RGQRFLSLMSLSTA Trigger: CGCCGTAGACAGACTCATCAAGGAGAGAAATCTTTGTCCTCTCCAGTACTCCCAACCCCTCCCCAAGACAAAGATGGGTGGCCTTCGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR TCA 90 bp | ACAAAGATTTCTCTCCTTGATGAGTCTGTCTACGGCGCACTGGAGTaGAGGTTGAAGTTCCGGGCTCTGACTTTGGCTAGGGTGGAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: TKISLLDESVYGALE*RLKFRALTLARVEG Trigger: CCCTTCCACCCTAGCCAAAGTCAGAGCCCGGAACTTCAACCTTCACTCCAGTGCGCCGTAGACAGACTCATCAAGGAGAGAAATCTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR TCA 90 bp | CTTTGCTGGTCCAGCCCATGGAAGGCAGTGATGGGTAGTCATCACTaGGTTCAAACTTGCAGCCCTGGAAGTTTTCCCCCTCAAACAGTG | + |
|
Preference number: 1 (lower is better) Translates to: LCWSSPWKAVMGSHH*VQTCSPGSFPPQTV Trigger: CACTGTTTGAGGGGGAAAACTTCCAGGGCTGCAAGTTTGAACTCAGTGATGACTACCCATCACTGCCTTCCATGGGCTGGACCAGCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR TCA 90 bp | TTTCAGGGAACCCACATCTTTGCTGGTCCAGCCCATGGAAGGCAGTaGTGGGTAGTCATCACTGAGTTCAAACTTGCAGCCCTGGAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: FQGTHIFAGPAHGRQ*WVVITEFKLAALEV Trigger: AACTTCCAGGGCTGCAAGTTTGAACTCAGTGATGACTACCCATCACTGCCTTCCATGGGCTGGACCAGCAAAGATGTGGGTTCCCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 90 bp | CCACAAATGCCACTACCACCCACCCAAGAGTTTATTCATACATCATaGGGTGGTGGTGGGTGGGTAGGTATTTCAAAGCAACTCACTTTG | + |
|
Preference number: 1 (lower is better) Translates to: PQMPLPPTQEFIHTS*GGGGWVGISKQLTL Trigger: CAAAGTGAGTTGCTTTGAAATACCTACCCACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGGTAGTGGCATTTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 90 bp | CTCACTTTGGTTGGGACCTGGAGCTTGGTGGCAGGAGATCAGAGGTaGGGGTGTGTGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LTLVGTWSLVAGDQR*GCVCVCARARVCVW Trigger: CCACACACACACACGCGCGCGCGCGCACACACACACACACCCCAACCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAACCAAAGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 90 bp | CCCTCAAACAGTGTCACGCGGCTGTCGCTGTGGTTCTGTGGTGGATaGAAACAGAAGGACCCCAGCATGCTCAGAACCCGCTGGTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: PSNSVTRLSLWFCGG*KQKDPSMLRTRWSL Trigger: CAAAGACCAGCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGCGACAGCCGCGTGACACTGTTTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 90 bp | TCATGGGGTGGTGGTGGGTGGGTAGGTATTTCAAAGCAACTCACTTaGGTTGGGACCTGGAGCTTGGTGGCAGGAGATCAGAGGTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SWGGGGWVGISKQLT*VGTWSLVAGDQRLG Trigger: CCCCAACCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAACCAAAGTGAGTTGCTTTGAAATACCTACCCACCCACCACCACCCCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGCAATTGGTTGCTGTGGTGGCCACTGCTTCCGCTCCAGGCACTCCAGCAAGAAAACCCCTAAATTaGCCCATTAGCCACAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GQQLVAVVATASAPGTPARKPLN*PISHSR Trigger: CCTGCTGTGGCTAATGGGCCAATTTAGGGGTTTTCT...TGCTGGAGTGCCTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTTTCCCCCTCAAACAGTGTCACGCGGCTGTCGCTGTGGTTCTGTGGTGGAAGCAATTGGTTGCTGTaGTGGCCACTGCTTCCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KFSPSNSVTRLSLWFCGGSNWLL*WPLLPL Trigger: GAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCT...TCCACCACAGAACCACAGCGACAGCCGCGTGACACTGTTTGAGGGGGAAAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTGGTTCTGTGGTGGATTGAAACAGAAGGACCCCAGCATGCTCAGAACCCGCACCGCACAGAGCACTaGCCTGAAGGACAGCAATTG | + |
|
Preference number: 2 (lower is better) Translates to: AVVLWWIETEGPQHAQNPHRTEH*PEGQQL Trigger: CAATTGCTGTCCTTCAGGCCAGTGCTCTGTGCGGTG...CGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 90 bp | TGGGTAGGTATTTCAAAGCAACTCACTTTGGTTGGGACCTGGAGCTaGGTGGCAGGAGATCAGAGGTTGGGGTGTGTGTGTGTGTGCGCG | + |
|
Preference number: 2 (lower is better) Translates to: WVGISKQLTLVGTWS*VAGDQRLGCVCVCA Trigger: CGCGCACACACACACACACCCCAACCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAACCAAAGTGAGTTGCTTTGAAATACCTACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | CCACCCACCCAAGAGTTTATTCATACATCATGGGGTGGTGGTGGGTGGGTAGGTAATTGGTTGCTGTGGTaGCCACTGCTTCCGCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PPTQEFIHTSWGGGGWVGNWLLW*PLLPLQ Trigger: CTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATT...ACCTACCCACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTGGTTCTGTGGTGGATTGAAACAGAAGGACCCCAGCATGCTCAGAACCCGCTGAAGGACAGCAATTaGTTGCTGTGGTGGCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: AVVLWWIETEGPQHAQNPLKDSN*LLWWPL Trigger: CAGTGGCCACCACAGCAACCAATTGCTGTCCTTCAG...CGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCACTACCACCCACCCAAGAGTTTATTCATACATCATGGGGTGGTGGTGGGTGCAGGAGATCAGAGGTTaGGGTGTGTGTGTGTGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: ATTTHPRVYSYIMGWWWVQEIRG*GVCVCA Trigger: CGCACACACACACACACCCCAACCTCTGATCTCCTG...CACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGGTAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCACTACCACCCACCCAAGAGTTTATTCATACATCATGGGGTGGTGGTGGGTGTTGGGACCTGGAGCTTaGTGGCAGGAGATCAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: ATTTHPRVYSYIMGWWWVLGPGA*WQEIRG Trigger: ACCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAA...CACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGGTAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTCTGTGGTGGATTGAAACAGAAGGACCCCAGCATGCTCAGAACCCGCTGGTTCTCTAGAATGAACTaGTGTCCCTGGAAGTCGGGG | + |
|
Preference number: 2 (lower is better) Translates to: WFCGGLKQKDPSMLRTRWFSRMN*CPWKSG Trigger: CCCCGACTTCCAGGGACAGCAGTTCATTCTAGAGAA...CCAGCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTTGGTGCTGTCCGTGGTGCTGATGCAGGGATAGGTCCACAAATGCCACTAACTTTGGTTGGGACCTaGAGCTTGGTGGCAGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VFGAVRGADAGIGPQMPLTLVGT*SLVAGD Trigger: ATCTCCTGCCACCAAGCTCCAGGTCCCAACCAAAGT...TAGTGGCATTTGTGGACCTATCCCTGCATCAGCACCACGGACAGCACCAAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTGGTTCTGTGGTGGATTGAAACAGAAGGACCCCAGCATGCTCAGAACCCGTGGGGTGGTGGTGGGTaGGTAGGTATTTCAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: AVVLWWIETEGPQHAQNPWGGGG*VGISKQ Trigger: TTGCTTTGAAATACCTACCCACCCACCACCACCCCA...CGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTTGGTGCTGTCCGTGGTGCTGATGCAGGGATAGGTCCACAAATGCCACTACTCCCTTCTCTAGAATaGACTGCTGTCCCTGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: VFGAVRGADAGIGPQMPLLPSLE*TAVPGS Trigger: ACTTCCAGGGACAGCAGTTCATTCTAGAGAAGGGAG...TAGTGGCATTTGTGGACCTATCCCTGCATCAGCACCACGGACAGCACCAAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGTGGATTGAAACAGAAGGACCCCAGCATGCTCAGAACCCGCTGGTCTTTGATCATGGGGTGGTGGTaGGTGGGTAGGTATTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: CGGLKQKDPSMLRTRWSLIMGWW*VGRYFK Trigger: TTTGAAATACCTACCCACCCACCACCACCCCATGAT...CAAAGACCAGCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | GGGGGAGGAGTTGGCTGTGCTCACCGCACAGAGCACTaGCCTGAAGGACAGCAATTGGTTGCTGTGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GGGVGCAHRTEH*PEGQQLVAVVA Trigger: GGCCACCACAGCAACCAATTGCTGTCCTTCAGGCCAGTGCTCTGTGCGGTGAGCACAGCCAACTCCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CAA 90 bp | GGACAGCAATTGGTTGCTGTGGTGGCCACTGCTTCCGCTCCAGGCACTCCAGCATGTCTTGGGGAGGGGTaGGGAGTACTGGAGAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: GQQLVAVVATASAPGTPACLGEG*GVLERT Trigger: TGTCCTCTCCAGTACTCCCAACCCCTCCCCAAGACA...TGCTGGAGTGCCTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | AGCACTGGCCTGAAGGACAGCAATTGGTTGCTGTGGTaGCCACTGCTTCCGCTCCAGGCACTCCAGCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: STGLKDSNWLLW*PLLPLQALQQG Trigger: TCCTTGCTGGAGTGCCTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCTGTCCTTCAGGCCAGTGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR TCA 72 bp | GTGTCACGCGGCTGTCGCTGTGGTTCTGTGGTGGATTaGAACAGAAGGACCCCAGCATGCTCAGAACCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSRGCRCGSVVD*NRRTPACSEPA Trigger: AGCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGCGACAGCCGCGTGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CAA 90 bp | CACTACCACCCACCCAAGAGTTTATTCATACATCATGGGGTGGTGGTGGGTGGGGTTGGGACCTGGAGCTaGGTGGCAGGAGATCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HYHPPKSLFIHHGVVVGGVGTWS*VAGDQR Trigger: CCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAAC...CCCACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGGTAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR TCA 72 bp | TCAGAACCCGCTGGTCTTTGGTGCTGTCCGTGGTGCTaGTGCAGGGATAGGTCCACAAATGCCACTACCACC | + |
|
Preference number: 3 (lower is better) Translates to: SEPAGLWCCPWC*CRDRSTNATTT Trigger: GGTGGTAGTGGCATTTGTGGACCTATCCCTGCATCAGCACCACGGACAGCACCAAAGACCAGCGGGTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CAA 90 bp | CACTACCACCCACCCAAGAGTTTATTCATACATCATGGGGTGGTGGTGGGTGGGTTCCGGGCTCTGACTTaGGCTAGGGTGGAAGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HYHPPKSLFIHHGVVVGGFRALT*ARVEGR Trigger: TCTCCCTTCCACCCTAGCCAAAGTCAGAGCCCGGAA...CCCACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGGTAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | GAAGTCGGGGTACTCGAAGGCCACCCATCTTTGTCTTaGGGAGGGGTTGGGAGTACTGGAGAGGACAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EVGVLEGHPSLS*GGVGSTGEDKD Trigger: ATCTTTGTCCTCTCCAGTACTCCCAACCCCTCCCCAAGACAAAGATGGGTGGCCTTCGAGTACCCCGACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | CTCAAACAGTGTCACGCGGCTGTCGCTGTGGTTCTGTaGTGGATTGAAACAGAAGGACCCCAGCATGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LKQCHAAVAVVL*WIETEGPQHAQ Trigger: CTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGCGACAGCCGCGTGACACTGTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTCTGTGGTGGATTGAAACAGAAGGACCCCAGCATGCTCAGAACCCGCTGGAAGGACAGCAATTGGTaGCTGTGGTGGCCACTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: WFCGGLKQKDPSMLRTRWKDSNW*LWWPLL Trigger: AAGCAGTGGCCACCACAGCAACCAATTGCTGTCCTT...CCAGCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | AAACAGTGTCACGCGGCTGTCGCTGTGGTTCTGTGGTaGATTGAAACAGAAGGACCCCAGCATGCTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KQCHAAVAVVLW*IETEGPQHAQN Trigger: GTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGCGACAGCCGCGTGACACTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | TTTCAAAGCAACTCACTTTGGTTGGGACCTGGAGCTTaGTGGCAGGAGATCAGAGGTTGGGGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FQSNSLWLGPGA*WQEIRGWGVCV Trigger: CACACACACACCCCAACCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAACCAAAGTGAGTTGCTTTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR-3UTR CAA 90 bp | GATGCAGGGATAGGTCCACAAATGCCACTACCACCCACCCAAGAGTTTATTCATAGCAACTCACTTTGGTaGGGACCTGGAGCTTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DAGIGPQMPLPPTQEFIHSNSLW*GPGAWW Trigger: CCACCAAGCTCCAGGTCCCAACCAAAGTGAGTTGCT...ATGAATAAACTCTTGGGTGGGTGGTAGTGGCATTTGTGGACCTATCCCTGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | GTAGGTATTTCAAAGCAACTCACTTTGGTTGGGACCTaGAGCTTGGTGGCAGGAGATCAGAGGTTGGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VGISKQLTLVGT*SLVAGDQRLGC Trigger: ACACCCCAACCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAACCAAAGTGAGTTGCTTTGAAATACCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | ACCACCCACCCAAGAGTTTATTCATACATCATGGGGTaGTGGTGGGTGGGTAGGTATTTCAAAGCAACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TTHPRVYSYIMG*WWVGRYFKATH Trigger: GTGAGTTGCTTTGAAATACCTACCCACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | CCACTACCACCCACCCAAGAGTTTATTCATACATCATaGGGTGGTGGTGGGTGGGTAGGTATTTCAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PLPPTQEFIHTS*GGGGWVGISKQ Trigger: TTGCTTTGAAATACCTACCCACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGGTAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | CAAGAGTTTATTCATACATCATGGGGTGGTGGTGGGTaGGTAGGTATTTCAAAGCAACTCACTTTGGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QEFIHTSWGGGG*VGISKQLTLVG Trigger: CCCAACCAAAGTGAGTTGCTTTGAAATACCTACCCACCCACCACCACCCCATGATGTATGAATAAACTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | CACCCAAGAGTTTATTCATACATCATGGGGTGGTGGTaGGTGGGTAGGTATTTCAAAGCAACTCACTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HPRVYSYIMGWW*VGRYFKATHFG Trigger: ACCAAAGTGAGTTGCTTTGAAATACCTACCCACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CCA 72 bp | ACCCACCCAAGAGTTTATTCATACATCATGGGGTGGTaGTGGGTGGGTAGGTATTTCAAAGCAACTCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: THPRVYSYIMGW*WVGRYFKATHF Trigger: AAAGTGAGTTGCTTTGAAATACCTACCCACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 72 bp | GTTGGGACCTGGAGCTTGGTGGCAGGAGATCAGAGGTaGGGGTGTGTGTGTGTGTGCGCGCGCGCGCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGTWSLVAGDQR*GCVCVCARARV Trigger: CACACGCGCGCGCGCGCACACACACACACACCCCAACCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| CDS-3UTR TCA 90 bp | GGACAGCAATTGGTTGCTGTGGTGGCCACTGCTTCCGCTCCAGGCACTCCAGCACGCCGTTTTCCACCTTaGCTGAGCGCACCCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQQLVAVVATASAPGTPARRFPP*LSAPCA Trigger: TGCGCAGGGTGCGCTCAGTCAAGGTGGAAAACGGCG...TGCTGGAGTGCCTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 72 bp | ACCGCACAGAGCACTGGCCTGAAGGACAGCAATTGGTaGCTGTGGTGGCCACTGCTTCCGCTCCAGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TAQSTGLKDSNW*LWWPLLPLQAL Trigger: GAGTGCCTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCTGTCCTTCAGGCCAGTGCTCTGTGCGGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| CDS-3UTR CCA 90 bp | CTGTGGTTCTGTGGTGGATTGAAACAGAAGGACCCCAGCATGCTCAGAACCCGCCGGCAGCGACGACCCTaGAAGTCCTCCTCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWFCGGLKQKDPSMLRTRRQRRP*KSSSSQ Trigger: CTGGGATGAGGAGGACTTCCAGGGTCGTCGCTGCCG...GCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| CDS-3UTR TCA 90 bp | GCCACTACCACCCACCCAAGAGTTTATTCATACATCATGGGGTGGTGGTGGGTGGTTTTCCACCTTGACTaGGCGCACCCTGCGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATTTHPRVYSYIMGWWWVVFHLD*AHPAQG Trigger: GCCCTGCGCAGGGTGCGCTCAGTCAAGGTGGAAAAC...CACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGGTAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| CDS-3UTR CCA 90 bp | TGGTTCTGTGGTGGATTGAAACAGAAGGACCCCAGCATGCTCAGAACCCGCTGGCCCGCTCACAGACGTTaGCACAGTCGCTCAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WFCGGLKQKDPSMLRTRWPAHRR*HSRSVA Trigger: GGCTACTGAGCGACTGTGCCAACGTCTGTGAGCGGG...CCAGCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 72 bp | AGTGTCACGCGGCTGTCGCTGTGGTTCTGTGGTGGATaGAAACAGAAGGACCCCAGCATGCTCAGAACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SVTRLSLWFCGG*KQKDPSMLRTR Trigger: GCGGGTTCTGAGCATGCTGGGGTCCTTCTGTTTCAATCCACCACAGAACCACAGCGACAGCCGCGTGACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 72 bp | GGTGGTGGGTGGGTAGGTATTTCAAAGCAACTCACTTaGGTTGGGACCTGGAGCTTGGTGGCAGGAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGGWVGISKQLT*VGTWSLVAGDQ Trigger: CTGATCTCCTGCCACCAAGCTCCAGGTCCCAACCAAAGTGAGTTGCTTTGAAATACCTACCCACCCACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 72 bp | TACTCGAAGGCCACCCATCTTTGTCTTGGGGAGGGGTaGGGAGTACTGGAGAGGACAAAGATTTCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKATHLCLGEG*GVLERTKISLL Trigger: AAGGAGAGAAATCTTTGTCCTCTCCAGTACTCCCAACCCCTCCCCAAGACAAAGATGGGTGGCCTTCGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| 3UTR CAA 72 bp | ATTTCAAAGCAACTCACTTTGGTTGGGACCTGGAGCTaGGTGGCAGGAGATCAGAGGTTGGGGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISKQLTLVGTWS*VAGDQRLGCVC Trigger: ACACACACACCCCAACCTCTGATCTCCTGCCACCAAGCTCCAGGTCCCAACCAAAGTGAGTTGCTTTGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| CDS CCA 90 bp | TCACAGACGTTGGCACAGTCGCTCAGTAGCCGGCAGCGACGACCCTaGAAGTCCTCCTCATCCCAGAGTGTGAGGCAAACGGGCGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQTLAQSLSSRQRRP*KSSSSQSVRQTGAE Trigger: CTCGGCGCCCGTTTGCCTCACACTCTGGGATGAGGAGGACTTCCAGGGTCGTCGCTGCCGGCTACTGAGCGACTGTGCCAACGTCTGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006721.3 ENSMUST00000133833.3 |
||
| CDS GCA 90 bp | GCTGGACTCTTCGAATGGACTGCAGCTGTCCAGTGTGGGCCTGTGTaGCAAAGTCACTGTAGGTTCGAAACTCCCCGCTGTGCCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGLFEWTAAVQCGPV*QSHCRFETPRCAGP Trigger: GGGACCGGCACAGCGGGGAGTTTCGAACCTACAGTGACTTTGGCACACAGGCCCACACTGGACAGCTGCAGTCCATTCGAAGAGTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS CCA 90 bp | CTGTCGCTGTGGTTCGCACAGAGCACTGGCCTGAAGGACAGCAATTaGTTGCTGTGGTGGCCACTGCTTCCGCTCCAGGCACTCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSLWFAQSTGLKDSN*LLWWPLLPLQALQQ Trigger: TTGCTGGAGTGCCTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCTGTCCTTCAGGCCAGTGCTCTGTGCGAACCACAGCGACAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS-3UTR CAA 90 bp | ACTACCACCCACCCAAGAGTTTATTCATACATCATGGGGTGGTGGTGGGTGGGTGCGCCGTTTTCCACCTaGACTGAGCGCACCCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TTTHPRVYSYIMGWWWVGAPFST*TERTLR Trigger: GCGCAGGGTGCGCTCAGTCAAGGTGGAAAACGGCGC...ACCCACCCACCACCACCCCATGATGTATGAATAAACTCTTGGGTGGGTGGTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| CDS-3UTR CAA 90 bp | TTGGCTAGGGTGGAAGGGAGAGAAGCCAGAAAACCCCTAAATTGGCCCATTAGCCCCCGCTCACAGACGTaGGCACAGTCGCTCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LARVEGREARKPLNWPISPRSQT*AQSLSS Trigger: GCTACTGAGCGACTGTGCCAACGTCTGTGAGCGGGG...GCTAATGGGCCAATTTAGGGGTTTTCTGGCTTCTCTCCCTTCCACCCTAGCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133833.3 |
||
| CDS TCA 72 bp | AGCGACGACCCTGGAAGTCCTCCTCATCCCAGAGTGTaGGGCAAACGGGCGCCGAGCCCGGCGCGGGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SDDPGSPPHPRV*GKRAPSPARGR Trigger: GCGCCCCCGCGCCGGGCTCGGCGCCCGTTTGCCTCACACTCTGGGATGAGGAGGACTTCCAGGGTCGTCGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006721.3 ENSMUST00000133833.3 |
||
| CDS CAA 72 bp | GAGCGCACCCTGCGCAGGGCTCCCCGCTCACAGACGTaGGCACAGTCGCTCAGTAGCCGGCAGCGACGACCC | + |
|
Preference number: 6 (lower is better) Translates to: ERTLRRAPRSQT*AQSLSSRQRRP Trigger: GGGTCGTCGCTGCCGGCTACTGAGCGACTGTGCCAACGTCTGTGAGCGGGGAGCCCTGCGCAGGGTGCGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006721.3 ENSMUST00000133833.3 |
||
| CDS CCA 72 bp | AGCGCACCCTGCGCAGGGCTCCCCGCTCACAGACGTTaGCACAGTCGCTCAGTAGCCGGCAGCGACGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAPCAGLPAHRR*HSRSVAGSDDP Trigger: AGGGTCGTCGCTGCCGGCTACTGAGCGACTGTGCCAACGTCTGTGAGCGGGGAGCCCTGCGCAGGGTGCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006721.3 ENSMUST00000133833.3 |
||
| CDS CAA 90 bp | ACCTTGACTGAGCGCACCCTGCGCAGGGCTCCCCGCTCACAGACGTaGGCACAGTCGCTCAGTAGCCGGCAGCGACGACCCTGGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLTERTLRRAPRSQT*AQSLSSRQRRPWKS Trigger: GGACTTCCAGGGTCGTCGCTGCCGGCTACTGAGCGACTGTGCCAACGTCTGTGAGCGGGGAGCCCTGCGCAGGGTGCGCTCAGTCAAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006721.3 ENSMUST00000133833.3 |
||
| CDS TCA 72 bp | CTCGAAGGCCACCCATGCGCCGTTTTCCACCTTGACTaGGCGCACCCTGCGCAGGGCTCCCCGCTCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LEGHPCAVFHLD*AHPAQGSPLTD Trigger: GTCTGTGAGCGGGGAGCCCTGCGCAGGGTGCGCTCAGTCAAGGTGGAAAACGGCGCATGGGTGGCCTTCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS TCA 72 bp | GGTACTCGAAGGCCACCCATGCGCCGTTTTCCACCTTaGCTGAGCGCACCCTGCGCAGGGCTCCCCGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GTRRPPMRRFPP*LSAPCAGLPAH Trigger: GTGAGCGGGGAGCCCTGCGCAGGGTGCGCTCAGTCAAGGTGGAAAACGGCGCATGGGTGGCCTTCGAGTACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS CAA 72 bp | GGGTACTCGAAGGCCACCCATGCGCCGTTTTCCACCTaGACTGAGCGCACCCTGCGCAGGGCTCCCCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GYSKATHAPFST*TERTLRRAPRS Trigger: TGAGCGGGGAGCCCTGCGCAGGGTGCGCTCAGTCAAGGTGGAAAACGGCGCATGGGTGGCCTTCGAGTACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS CAA 90 bp | GCTGTCGCTGTGGTTCGCACAGAGCACTGGCCTGAAGGACAGCAATaGGTTGCTGTGGTGGCCACTGCTTCCGCTCCAGGCACTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AVAVVRTEHWPEGQQ*VAVVATASAPGTPA Trigger: TGCTGGAGTGCCTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCTGTCCTTCAGGCCAGTGCTCTGTGCGAACCACAGCGACAGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS CCA 72 bp | TTGGCACAGTCGCTCAGTAGCCGGCAGCGACGACCCTaGAAGTCCTCCTCATCCCAGAGTGTGAGGCAAACG | + |
|
Preference number: 6 (lower is better) Translates to: LAQSLSSRQRRP*KSSSSQSVRQT Trigger: CGTTTGCCTCACACTCTGGGATGAGGAGGACTTCCAGGGTCGTCGCTGCCGGCTACTGAGCGACTGTGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006721.3 ENSMUST00000133833.3 |
||
| CDS CCA 72 bp | TGTCACGCGGCTGTCGCTGTGGTTCGCACAGAGCACTaGCCTGAAGGACAGCAATTGGTTGCTGTGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CHAAVAVVRTEH*PEGQQLVAVVA Trigger: GGCCACCACAGCAACCAATTGCTGTCCTTCAGGCCAGTGCTCTGTGCGAACCACAGCGACAGCCGCGTGACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS CAA 90 bp | TCGCTGTGGTTCGCACAGAGCACTGGCCTGAAGGACAGCAATTGGTaGCTGTGGTGGCCACTGCTTCCGCTCCAGGCACTCCAGCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLWFAQSTGLKDSNW*LWWPLLPLQALQQG Trigger: TCCTTGCTGGAGTGCCTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCTGTCCTTCAGGCCAGTGCTCTGTGCGAACCACAGCGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS TCA 72 bp | AGCCAGGGTACTGGTAGGCCACCCATGCTCCGGAGCTaGCTTTCAGGGAACCCACATCTTTGCTGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SQGTGRPPMLRS*LSGNPHLCWSS Trigger: GCTGGACCAGCAAAGATGTGGGTTCCCTGAAAGTCAGCTCCGGAGCATGGGTGGCCTACCAGTACCCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS CAA 72 bp | TTCGCACAGAGCACTGGCCTGAAGGACAGCAATTGGTaGCTGTGGTGGCCACTGCTTCCGCTCCAGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: FAQSTGLKDSNW*LWWPLLPLQAL Trigger: GAGTGCCTGGAGCGGAAGCAGTGGCCACCACAGCAACCAATTGCTGTCCTTCAGGCCAGTGCTCTGTGCGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||
| CDS GCA 72 bp | TTCGAATGGACTGCAGCTGTCCAGTGTGGGCCTGTGTaGCAAAGTCACTGTAGGTTCGAAACTCCCCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FEWTAAVQCGPV*QSHCRFETPRC Trigger: ACAGCGGGGAGTTTCGAACCTACAGTGACTTTGGCACACAGGCCCACACTGGACAGCTGCAGTCCATTCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006721.3 |
||