Pregenerated sensors for CRYAB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032060Ensembl transcript IDs: ENSMUST00000034562.9, ENSMUST00000214609.2, ENSMUST00000214962.2, ENSMUST00000216755.2, ENSMUST00000217475.2
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCAGTCAATCCAGCTGGGTaGCCGCAGGAAGGAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: NLGQPLALISFSTSHRFSVNPAG*PQEGGW Trigger: CCACCCTCCTTCCTGCGGGCACCCAGCTGGATTGAC...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR GCA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTGTCAATCCAGCTGGGTaGCCGCAGGAAGGAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: NNLGQPLALISFSTSHRFVNPAG*PQEGGW Trigger: CCACCCTCCTTCCTGCGGGCACCCAGCTGGATTGAC...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR TCA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCAGGAACTCCCTGGAGATaGAGCCATGTTCGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NLGQPLALISFSTSHRFSGTPWR*SHVRPG Trigger: GCCAGGACGAACATGGCTTCATCTCCAGGGAGTTCC...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR TCA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCAGCTTCTCTTCACGGGTaGTGGGAATGGTGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: NLGQPLALISFSTSHRFSASLHG*WEWCAQ Trigger: CTGAGCGCACCATTCCCATCACCCGTGAAGAGAAGC...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR GCA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCACTACTTCTTAGGGGCTaGGGCGACAGCAGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: NLGQPLALISFSTSHRFSLLLRG*GDSRLL Trigger: GAGAAGCCTGCTGTCGCCGCAGCCCCTAAGAAGTAG...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CCA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCATGCTCTCCGAAGAACTaGTCGAAGAGGCGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: NLGQPLALISFSTSHRFSCSPKN*SKRRLG Trigger: CCCAAGCCGCCTCTTCGACCAGTTCTTCGGAGAGCA...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR TCA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTGGAACTCCCTGGAGATaGAGCCATGTTCGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NNLGQPLALISFSTSHRFGTPWR*SHVRPG Trigger: GCCAGGACGAACATGGCTTCATCTCCAGGGAGTTCC...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR TCA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTGCTTCTCTTCACGGGTaGTGGGAATGGTGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: NNLGQPLALISFSTSHRFASLHG*WEWCAQ Trigger: CTGAGCGCACCATTCCCATCACCCGTGAAGAGAAGC...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR GCA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTCTACTTCTTAGGGGCTaGGGCGACAGCAGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: NNLGQPLALISFSTSHRFLLLRG*GDSRLL Trigger: GAGAAGCCTGCTGTCGCCGCAGCCCCTAAGAAGTAG...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CCA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTGCTCTCCGAAGAACTaGTCGAAGAGGCGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: NNLGQPLALISFSTSHRFCSPKN*SKRRLG Trigger: CCCAAGCCGCCTCTTCGACCAGTTCTTCGGAGAGCA...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR TCA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCACAGGGAAGTGGCTGTTaGGAAGAGGTCAGACTCCAA | + |
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Preference number: 4 (lower is better) Translates to: NLGQPLALISFSTSHRFSQGSGC*EEVRLQ Trigger: TTGGAGTCTGACCTCTTCTCAACAGCCACTTCCCTG...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR TCA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTCAGGGAAGTGGCTGTTaGGAAGAGGTCAGACTCCAA | + |
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Preference number: 4 (lower is better) Translates to: NNLGQPLALISFSTSHRFQGSGC*EEVRLQ Trigger: TTGGAGTCTGACCTCTTCTCAACAGCCACTTCCCTG...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR GCA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCAGACTCCAACAGGTaGTCTCCGAAGAACTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: NNLGQPLALISFSTSHRFSDSNR*SPKNWS Trigger: CGACCAGTTCTTCGGAGAGCACCTGTTGGAGTCTGA...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CCA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCAATCCGGTACTTCCTGTaGAACTCCCTGGAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: NLGQPLALISFSTSHRFSIRYFL*NSLEMK Trigger: CTTCATCTCCAGGGAGTTCCACAGGAAGTACCGGAT...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CCA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTATCCGGTACTTCCTGTaGAACTCCCTGGAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: NNLGQPLALISFSTSHRFIRYFL*NSLEMK Trigger: CTTCATCTCCAGGGAGTTCCACAGGAAGTACCGGAT...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CCA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCAAGACACCTGTTTCCTTaGTCCATTCACAGTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: NLGQPLALISFSTSHRFSRHLFP*SIHSED Trigger: GTCCTCACTGTGAATGGACCAAGGAAACAGGTGTCT...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR TCA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTTGGTCCATTCACAGTaGGGACTCCATCAGATGACA | + |
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Preference number: 4 (lower is better) Translates to: NNLGQPLALISFSTSHRFLVHSQ*GLHQMT Trigger: TGTCATCTGATGGAGTCCTCACTGTGAATGGACCAA...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS CCA 90 bp | TGTCCTTCTCCAAACGCATCTCTGAGAGTCCGGTGTCAATCCAGCTaGGTGCCCGCAGGAAGGAGGGTGGCCGAAGGTAGAAGGGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: CPSPNASLRVRCQSS*VPAGRRVAEGRRGS Trigger: TGAGCCCCTTCTACCTTCGGCCACCCTCCTTCCTGCGGGCACCCAGCTGGATTGACACCGGACTCTCAGAGATGCGTTTGGAGAAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034562.9 ENSMUST00000214609.2 ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS GCA 90 bp | ATCACGTCCCCCAGAACCTTGACTTTGAGTTCCTCCGGAGAGAAGTaGTTCACGTCCAGATTCACAGAGAATCTGTCCTTCTCCAAACGC | + |
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Preference number: 5 (lower is better) Translates to: ITSPRTLTLSSSGEK*FTSRFTENLSFSKR Trigger: GCGTTTGGAGAAGGACAGATTCTCTGTGAATCTGGACGTGAAGCACTTCTCTCCGGAGGAACTCAAAGTCAAGGTTCTGGGGGACGTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000034562.9 ENSMUST00000214609.2 ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CAA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCAGGTCGAAGAGGCGGCTaGGGGAGTGGAAGGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: NLGQPLALISFSTSHRFSGRRGG*GSGRGR Trigger: TCTTCCCCTTCCACTCCCCAAGCCGCCTCTTCGACC...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CAA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTGGTCGAAGAGGCGGCTaGGGGAGTGGAAGGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: NNLGQPLALISFSTSHRFGRRGG*GSGRGR Trigger: TCTTCCCCTTCCACTCCCCAAGCCGCCTCTTCGACC...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CAA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCAACGTCCCCCAGAACCTaGACTTTGAGTTCCTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: NLGQPLALISFSTSHRFSTSPRT*TLSSSG Trigger: TCCGGAGGAACTCAAAGTCAAGGTTCTGGGGGACGT...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CAA 90 bp | AATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCATCAGGGAAGTGGCTGTaGAGAAGAGGTCAGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: NLGQPLALISFSTSHRFSSGKWL*RRGQTP Trigger: TGGAGTCTGACCTCTTCTCAACAGCCACTTCCCTGA...TGAAAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CAA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTACGTCCCCCAGAACCTaGACTTTGAGTTCCTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: NNLGQPLALISFSTSHRFTSPRT*TLSSSG Trigger: TCCGGAGGAACTCAAAGTCAAGGTTCTGGGGGACGT...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CAA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTTCAGGGAAGTGGCTGTaGAGAAGAGGTCAGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: NNLGQPLALISFSTSHRFSGKWL*RRGQTP Trigger: TGGAGTCTGACCTCTTCTCAACAGCCACTTCCCTGA...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS-3UTR CAA 90 bp | AATAATCTGGGCCAGCCCTTAGCATTAATAAGCTTCAGCACTAGTCACAGATTTCCCAGAACCTTGACTTaGAGTTCCTCCGGAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: NNLGQPLALISFSTSHRFPRTLT*SSSGEK Trigger: CTTCTCTCCGGAGGAACTCAAAGTCAAGGTTCTGGG...AAATCTGTGACTAGTGCTGAAGCTTATTAATGCTAAGGGCTGGCCCAGATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS CCA 72 bp | CCAAACGCATCTCTGAGAGTCCGGTGTCAATCCAGCTaGGTGCCCGCAGGAAGGAGGGTGGCCGAAGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PNASLRVRCQSS*VPAGRRVAEGR Trigger: TCTACCTTCGGCCACCCTCCTTCCTGCGGGCACCCAGCTGGATTGACACCGGACTCTCAGAGATGCGTTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034562.9 ENSMUST00000214609.2 ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS CCA 72 bp | AAGAGGTCAGACTCCAACAGGTGCTCTCCGAAGAACTaGTCGAAGAGGCGGCTTGGGGAGTGGAAGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: KRSDSNRCSPKN*SKRRLGEWKGK Trigger: CTTCCCCTTCCACTCCCCAAGCCGCCTCTTCGACCAGTTCTTCGGAGAGCACCTGTTGGAGTCTGACCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000034562.9 ENSMUST00000214609.2 ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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| CDS TCA 72 bp | CTGGGATCCGGTACTTCCTGTGGAACTCCCTGGAGATaGAGCCATGTTCGTCCTGGCGTTCTTCGTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LGSGTSCGTPWR*SHVRPGVLRAC Trigger: GCAAGCACGAAGAACGCCAGGACGAACATGGCTTCATCTCCAGGGAGTTCCACAGGAAGTACCGGATCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034562.9 ENSMUST00000214609.2 ENSMUST00000214962.2 ENSMUST00000216755.2 ENSMUST00000217475.2 |
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