Pregenerated sensors for CRX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041578Ensembl transcript IDs: ENSMUST00000044434.13, ENSMUST00000132563.2, ENSMUST00000172758.3, ENSMUST00000174318.8
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAAGCAGAAGCCGGGGCATAGGTCATGGCATAAGGGGCTGAGGTaGGAGAGGGCCCAGAAGCCACTAGGCCGGCTCTCTGGGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: RKQKPGHRSWHKGLR*ERAQKPLGRLSGPQ Trigger: CTGAGGCCCAGAGAGCCGGCCTAGTGGCTTCTGGGCCCTCTCTCACCTCAGCCCCTTATGCCATGACCTATGCCCCGGCTTCTGCTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR TCA 90 bp | GCAATCCTCCTGCCTCATCTTCTTTCATGCTGGGATTATGACCATTaGGTCAGTCAACACACCTGGCTCAGGGCACCCGGAGTTCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: AILLPHLLSCWDYDH*VSQHTWLRAPGVLS Trigger: GCTTAGAACTCCGGGTGCCCTGAGCCAGGTGTGTTGACTGACTCAATGGTCATAATCCCAGCATGAAAGAAGATGAGGCAGGAGGATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR CCA 90 bp | TCTGCCTTATCAGCCTTGTGGCTTGGAAAGAAGGATTTGCAGGGGTaGGAGTGCAACAGGGTTTTATGTAGCCCAGGCTGGCCTCAAACT | + |
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Preference number: 1 (lower is better) Translates to: SALSALWLGKKDLQG*ECNRVLCSPGWPQT Trigger: AGTTTGAGGCCAGCCTGGGCTACATAAAACCCTGTTGCACTCCCACCCCTGCAAATCCTTCTTTCCAAGCCACAAGGCTGATAAGGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR GCA 90 bp | GAGGCTGAATGGTTCACAGCCTTTGGCAGGATTGCTACTTGCTGTTaGTTGCTGAGAGCTACTCTCCTGGAATCTAAGCTGGAGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: EAEWFTAFGRIATCC*LLRATLLESKLEET Trigger: TGTCTCCTCCAGCTTAGATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCATTCAGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR GCA 90 bp | ACACCTGAGGCTGAATGGTTCACAGCCTTTGGCAGGATTGCTACTTaGTGTTGCTTGCTGAGAGCTACTCTCCTGGAATCTAAGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: TPEAEWFTAFGRIAT*CCLLRATLLESKLE Trigger: CTCCAGCTTAGATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCATTCAGCCTCAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR TCA 90 bp | GACTGGGGAAAAGCATCAGATATGCACATCAGTCATGACCTGTACTaGCTGCTGCTGGGCTGTCTTGAGAGAGGAAGGAGCCACTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: DWGKASDMHISHDLY*LLLGCLERGRSHFH Trigger: ATGAAAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGCAGTCAGTACAGGTCATGACTGATGTGCATATCTGATGCTTTTCCCCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR CCA 90 bp | TACGTTTTCCAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTaGCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCTTCTTTCATG | + |
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Preference number: 1 (lower is better) Translates to: YVFQMNLEVSLCSPG*PQVPSNPPASSSFM Trigger: CATGAAAGAAGATGAGGCAGGAGGATTGCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTGGAAAACGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR TCA 90 bp | TCCCTCGTGTTGAAATCACAAGCATGTGCCATCACTCCTGGTTTATaGAATAGAATATGTCCATGGACTGGAGAGATGACTCAGCAATTA | + |
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Preference number: 1 (lower is better) Translates to: SLVLKSQACAITPGL*NRICPWTGEMTQQL Trigger: TAATTGCTGAGTCATCTCTCCAGTCCATGGACATATTCTATTTCATAAACCAGGAGTGATGGCACATGCTTGTGATTTCAACACGAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR CAA 90 bp | ACGGGAGGGCCCCTTGTGGGTGGTGCCATCCCTGGGCTGGTAGTCTaGGGTTCTATAAGCAAACTGAGCAAGTCAGAGGAAGCAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TGGPLVGGAIPGLVV*GSISKLSKSEEASQ Trigger: CTGGCTTGCTTCCTCTGACTTGCTCAGTTTGCTTATAGAACCCAAGACTACCAGCCCAGGGATGGCACCACCCACAAGGGGCCCTCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGCCTCAGGCAAAGGAGCCTCTGAGGCTGGACTCCAAATGGACACGGTGGTGTTGCTGTTTCTGCTaGTGTCGCTGCTGTCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: SGPQAKEPLRLDSKWTRWCCCFC*CRCCLH Trigger: ATGCAGACAGCAGCGACAGCAGCAGAAACAGCAACA...CCACCGTGTCCATTTGGAGTCCAGCCTCAGAGGCTCCTTTGCCTGAGGCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACCGGGAGGGCCCCTTGTaGGTGGTGCCATCCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ALPEVLGSISSNYVVAHNREGPL*VVPSLG Trigger: GCCCAGGGATGGCACCACCCACAAGGGGCCCTCCCG...GTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR TCA 90 bp | GTAACATCCCTCCATGGCCTCTACATCAGCTCCTGCTTCCTGACCTGCTTGAGTGCTGCTGGGCTGTCTTaGGAGAGGAAGGAGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: VTSLHGLYISSCFLTCLSAAGLS*ERKEPL Trigger: AAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGC...ACTCAAGCAGGTCAGGAAGCAGGAGCTGATGTAGAGGCCATGGAGGGATGTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | GTAAATTTCCAGGTGCCTGTGGGGTCCTTGAATTCCAGGCTGTCCACAGGACTGAGGCTGGACTCCAAATaGACACGGTGGCCACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VNFQVPVGSLNSRLSTGLRLDSK*TRWPLL Trigger: CAGCAGTGGCCACCGTGTCCATTTGGAGTCCAGCCT...CAGTCCTGTGGACAGCCTGGAATTCAAGGACCCCACAGGCACCTGGAAATTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR CCA 90 bp | AAACTTCCAGGCACTCTGATCTTTGTAGTCCAGAGGGTCCATGGGATTGTAGGTGCCGGACCCCCAAGTTaGGGCACCATGGGCGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KLPGTLIFVVQRVHGIVGAGPPS*GTMGER Trigger: CCTTTCGCCCATGGTGCCCCAACTTGGGGGTCCGGC...ACCTACAATCCCATGGACCCTCTGGACTACAAAGATCAGAGTGCCTGGAAGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR CCA 90 bp | AAACTTCCAGGCACTCTGATCTTTGTAGTCCAGAGGGTCCATGGGATTGTAGGTAAGGAGGTGGGGGACTaGGCCAGGGATGGCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: KLPGTLIFVVQRVHGIVGKEVGD*ARDGPT Trigger: TGTGGGGCCATCCCTGGCCCAGTCCCCCACCTCCTT...ACCTACAATCCCATGGACCCTCTGGACTACAAAGATCAGAGTGCCTGGAAGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR GCA 90 bp | CTGAAACTTCCAGGCACTCTGATCTTTGTAGTCCAGAGGGTCCATGGGATTGTACCCGGGGGCTGCTGTTaGTGTTTCTGCTGCTGTCGC | + |
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Preference number: 2 (lower is better) Translates to: LKLPGTLIFVVQRVHGIVPGGCC*CFCCCR Trigger: GCGACAGCAGCAGAAACAGCAACAGCAGCCCCCGGG...TACAATCCCATGGACCCTCTGGACTACAAAGATCAGAGTGCCTGGAAGTTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCTTCTTTCATGCTGGGATTATGTGCCTGTGGGGTCCTTaGATTCCAGGCTGTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: ASSSQQSSCLIFFHAGIMCLWGP*IPGCPQ Trigger: CTGTGGACAGCCTGGAATTCAAGGACCCCACAGGCA...CATAATCCCAGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGAACTTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR CCA 90 bp | CATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTTCTGCCTTCCTTTGGTGACACCTGAGGCTGAATaGTTCACAGCCTTTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HQLLLPDLLEFQFCLPLVTPEAE*FTAFGR Trigger: CCTGCCAAAGGCTGTGAACCATTCAGCCTCAGGTGT...CACCAAAGGAAGGCAGAACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | ATGACCTGTACTGACTGCTGCTGGGCTGTCTTGAGAGAGGAAGGAGCCACTTTCACACCTGAGGCTGAATaGTTCACAGCCTTTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: MTCTDCCWAVLREEGATFTPEAE*FTAFGR Trigger: CCTGCCAAAGGCTGTGAACCATTCAGCCTCAGGTGT...GAAAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGCAGTCAGTACAGGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTGGCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCTTCTTTCATGCTGGCTTTGTAGTCCAGGCTaGCCTCAAGTTCCCAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: QAGLKFPAILLPHLLSCWLCSPG*PQVPSN Trigger: ATTGCTGGGAACTTGAGGCCAGCCTGGACTACAAAG...CCAGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGAACTTGAGGCCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTACGGAAGACTGGGGAAAAGCATCAGATATGCACATCAGTCATGACCTGTACTAGGCCGGCTCTCTaGGCCTCAGGCAAAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: PLRKTGEKHQICTSVMTCTRPAL*ASGKGA Trigger: GGCTCCTTTGCCTGAGGCCCAGAGAGCCGGCCTAGT...ACAGGTCATGACTGATGTGCATATCTGATGCTTTTCCCCAGTCTTCCGTAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR CAA 90 bp | GCTGAATGGTTCACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTaGCTGAGAGCTACTCTCCTGGAATCTAAGCTGGAGGAGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: AEWFTAFGRIATCCC*LRATLLESKLEETA Trigger: AGCTGTCTCCTCCAGCTTAGATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCATTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTTACGGAAGACTGGGGAAAAGCATCAGATATGCACATCAGTCATGACCTGTGCTGCTGGGCTGTCTTaGGAGAGGAAGGAGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: PLRKTGEKHQICTSVMTCAAGLS*ERKEPL Trigger: AAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGC...ACAGGTCATGACTGATGTGCATATCTGATGCTTTTCCCCAGTCTTCCGTAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR TCA 90 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAAGTTCCCAGCAGTCATGACCTGTACTaGCTGCTGCTGGGCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: QMNLEVSLCSPGWPQVPSSHDLY*LLLGCL Trigger: AAGACAGCCCAGCAGCAGTCAGTACAGGTCATGACT...GCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR GCA 90 bp | GTAACATCCCTCCATGGCCTCTACATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCCAGCAATCCTCCTaGCTCATCTTCTTTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: VTSLHGLYISSCFLTCLSSQQSS*LIFFHA Trigger: AGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGA...ACTCAAGCAGGTCAGGAAGCAGGAGCTGATGTAGAGGCCATGGAGGGATGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTTCCTGGAATCTAAGCTaGAGGAGACAGCTTGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: HSLWQDCYLLLLAESYSPSWNLS*RRQLES Trigger: GGACTCAAGCTGTCTCCTCCAGCTTAGATTCCAGGA...AGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR TCA 90 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAAGTTCCCAGCCTTGCTGTTGCTTGCTaGGAGCTACTCTCCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: QMNLEVSLCSPGWPQVPSLAVAC*ELLSWN Trigger: ATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAG...GCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTATGGTTCACAGCCTTTaGCAGGATTGCTACTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HSLWQDCYLLLLAESYSPMVHSL*QDCYLL Trigger: CAGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCAT...AGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAAGTTCCCAGCCTTTGTAGTCCAGGCTaGCCTCAAGTTCCCAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: QMNLEVSLCSPGWPQVPSLCSPG*PQVPSN Trigger: ATTGCTGGGAACTTGAGGCCAGCCTGGACTACAAAG...GCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGATATGAAGCCCCTTCTACAAGATCTGAAACTTCCAGGCACTCTGATCTTTCAAGTTGGGGCACCATaGGCGAAAGGTAGGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: GDMKPLLQDLKLPGTLIFQVGAP*AKGRDP Trigger: TGGATCCCTACCTTTCGCCCATGGTGCCCCAACTTG...AAAGATCAGAGTGCCTGGAAGTTTCAGATCTTGTAGAAGGGGCTTCATATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR CAA 90 bp | CTGACCTCCTCATTCTATGTCCATCTGCCTTATCAGCCTTGTGGCTaGGAAAGAAGGATTTGCAGGGGTGGGAGTGCAACAGGGTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: LTSSFYVHLPYQPCG*ERRICRGGSATGFY Trigger: ATAAAACCCTGTTGCACTCCCACCCCTGCAAATCCTTCTTTCCAAGCCACAAGGCTGATAAGGCAGATGGACATAGAATGAGGAGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAAACTTCCAGGCACTCTGATCTTTGTAGTCCAGAGGGTCCATGGGATTGTACTTGCTGTTGCTTGCTaGGAGCTACTCTCCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LKLPGTLIFVVQRVHGIVLAVAC*ELLSWN Trigger: ATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAG...TACAATCCCATGGACCCTCTGGACTACAAAGATCAGAGTGCCTGGAAGTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR GCA 90 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAAGTTCCCAGCTCCCAGCAATCCTCCTaGCTCATCTTCTTTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: QMNLEVSLCSPGWPQVPSSQQSS*LIFFHA Trigger: AGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGA...GCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGGGTATGCTGTAAAGGGGCTAAGCTCTCTAAAGGAGCTGAGGGTAGGAAATCCCAGCAATCCTCCTaGCTCATCTTCTTTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: LGVCCKGAKLSKGAEGRKSQQSS*LIFFHA Trigger: AGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGA...TTTCCTACCCTCAGCTCCTTTAGAGAGCTTAGCCCCTTTACAGCATACCCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACACACCTGAGGCTGAATaGTTCACAGCCTTTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALPEVLGSISSNYVVAHNTPEAE*FTAFGR Trigger: CCTGCCAAAGGCTGTGAACCATTCAGCCTCAGGTGT...GTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTTATCAGCCTTGTGGCTTGGAAAGAAGGATTTGCAGGGGTGGGAGTGCACTCCTATAGGCATCTaGAAGACTTCATCACTTGTG | + |
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Preference number: 2 (lower is better) Translates to: SALSALWLGKKDLQGWECTPIGI*KTSSLV Trigger: CACAAGTGATGAAGTCTTCCAGATGCCTATAGGAGT...GCACTCCCACCCCTGCAAATCCTTCTTTCCAAGCCACAAGGCTGATAAGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR TCA 90 bp | CAATCCTCCTGCCTCATCTTCTTTCATGCTGGGATTATGACCATTGAGTCAGTCCTTGCTGTTGCTTGCTaGGAGCTACTCTCCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: QSSCLIFFHAGIMTIESVLAVAC*ELLSWN Trigger: ATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAG...GACTGACTCAATGGTCATAATCCCAGCATGAAAGAAGATGAGGCAGGAGGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR TCA 90 bp | CCCGGAGTTCTAAGCCAAACATTCTCCAAGTCATTTGCAAGACAGATTTCCTTTAGGCAAAGGAGCCTCTaGGGCTGGACTCCAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: PGVLSQTFSKSFARQISFRQRSL*GWTPNG Trigger: TCCATTTGGAGTCCAGCCTCAGAGGCTCCTTTGCCT...AAAGGAAATCTGTCTTGCAAATGACTTGGAGAATGTTTGGCTTAGAACTCCGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR TCA 90 bp | AAACTTCCAGGCACTCTGATCTTTGTAGTCCAGAGGGTCCATGGGATTGTAGGTAGGGATCCAACCCACTaGAATAGGAACTTGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: KLPGTLIFVVQRVHGIVGRDPTH*NRNLEM Trigger: CATCTCCAAGTTCCTATTTCAGTGGGTTGGATCCCT...ACCTACAATCCCATGGACCCTCTGGACTACAAAGATCAGAGTGCCTGGAAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGGCTGTCTTGAGAGAGGAAGGAGCCACTTTCATTGCTTGGGGTATGCTGGAAAAGCATCAGATATaGACATCAGTCATGACCTGT | + |
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Preference number: 2 (lower is better) Translates to: CWAVLREEGATFIAWGMLEKHQI*TSVMTC Trigger: ACAGGTCATGACTGATGTGCATATCTGATGCTTTTC...CAGCATACCCCAAGCAATGAAAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACTCCTGGAATCTAAGCTaGAGGAGACAGCTTGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: ALPEVLGSISSNYVVAHNSWNLS*RRQLES Trigger: GGACTCAAGCTGTCTCCTCCAGCTTAGATTCCAGGA...GTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGATATGAAGCCCCTTCTACAAGATCTGAAACTTCCAGGCACTCTGATCTTTTCCTGGAATCTAAGCTaGAGGAGACAGCTTGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: GDMKPLLQDLKLPGTLIFSWNLS*RRQLES Trigger: GGACTCAAGCTGTCTCCTCCAGCTTAGATTCCAGGA...AAAGATCAGAGTGCCTGGAAGTTTCAGATCTTGTAGAAGGGGCTTCATATCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
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| 3UTR-3UTR CCA 90 bp | TCAACTCCTATAGGCATCTGGAAGACTTCATCACTTGTGCCCCCTCAATCTAACCTTTGTAGTCCAGGCTaGCCTCAAGTTCCCAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: STPIGIWKTSSLVPPQSNLCSPG*PQVPSN Trigger: ATTGCTGGGAACTTGAGGCCAGCCTGGACTACAAAG...GTTAGATTGAGGGGGCACAAGTGATGAAGTCTTCCAGATGCCTATAGGAGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTTACGGAAGACTGGGGAAAAGCATCAGATATGCACATCAGTCATGACCTGTTATGCACATCAGTCATaGCCTGTACTGACTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PLRKTGEKHQICTSVMTCYAHQS*PVLTAA Trigger: AGCAGCAGTCAGTACAGGTCATGACTGATGTGCATA...ACAGGTCATGACTGATGTGCATATCTGATGCTTTTCCCCAGTCTTCCGTAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAACTCCTATAGGCATCTGGAAGACTTCATCACTTGTGCCCCCTCAATCTAACATGGTTCACAGCCTTTaGCAGGATTGCTACTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: STPIGIWKTSSLVPPQSNMVHSL*QDCYLL Trigger: CAGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCAT...GTTAGATTGAGGGGGCACAAGTGATGAAGTCTTCCAGATGCCTATAGGAGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTGGGCTCTAGAACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCACATTATGCACATCAGTCATaGCCTGTACTGACTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SWALEHSIYLSSPPQYPHYAHQS*PVLTAA Trigger: AGCAGCAGTCAGTACAGGTCATGACTGATGTGCATA...ATGTGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTTCTAGAGCCCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGAACATTGACTGCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATCTTCAGTTGAGGAAATaGCTCCATGAGATCCGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LRTLTALPEVLGSISSNYLQLRK*LHEIRL Trigger: TAGCCGGATCTCATGGAGGCATTTCCTCAACTGAAG...ATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGCAGTCAATGTTCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR CAA 90 bp | AGAATATGTCCATGGACTGGAGAGATGACTCAGCAATTAAGAACATaGACTGCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTAT | + |
|
Preference number: 2 (lower is better) Translates to: RICPWTGEMTQQLRT*TALPEVLGSISSNY Trigger: ATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGCAGTCAATGTTCTTAATTGCTGAGTCATCTCTCCAGTCCATGGACATATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR TCA 90 bp | GCATCTTGGGCTCTAGAACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCAACATGTTCAAATGAATaGTCCCCTAAACCTACCATG | + |
|
Preference number: 2 (lower is better) Translates to: ASWALEHSIYLSSPPQYPTCSNE*SPKPTM Trigger: CATGGTAGGTTTAGGGGATCATTCATTTGAACATGT...TGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTTCTAGAGCCCAAGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR TCA 90 bp | AACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCACATCAAGCTTCTTTTGACATGTTCAAATGAATaGTCCCCTAAACCTACCATG | + |
|
Preference number: 2 (lower is better) Translates to: NILFIFQVLPNIHIKLLLTCSNE*SPKPTM Trigger: CATGGTAGGTTTAGGGGATCATTCATTTGAACATGT...CAAAAGAAGCTTGATGTGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR TCA 72 bp | AAGCCGGGGCATAGGTCATGGCATAAGGGGCTGAGGTaGGAGAGGGCCCAGAAGCCACTAGGCCGGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KPGHRSWHKGLR*ERAQKPLGRLS Trigger: AGAGAGCCGGCCTAGTGGCTTCTGGGCCCTCTCTCACCTCAGCCCCTTATGCCATGACCTATGCCCCGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAACTTCCAGGCACTCTGATCTTTGTAGTCCAGAGGGTCCATGGGATTGTACCCCGGGGGCTGCTGTaGCTGTTTCTGCTGCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LKLPGTLIFVVQRVHGIVPRGLL*LFLLLS Trigger: CGACAGCAGCAGAAACAGCAACAGCAGCCCCCGGGG...TACAATCCCATGGACCCTCTGGACTACAAAGATCAGAGTGCCTGGAAGTTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
||
| 3UTR CCA 72 bp | TCAGCCTTGTGGCTTGGAAAGAAGGATTTGCAGGGGTaGGAGTGCAACAGGGTTTTATGTAGCCCAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SALWLGKKDLQG*ECNRVLCSPGW Trigger: CCAGCCTGGGCTACATAAAACCCTGTTGCACTCCCACCCCTGCAAATCCTTCTTTCCAAGCCACAAGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAACATCCCTCCATGGCCTCTACATCAGCTCCTGCTTCCTGACCTGCTTGAGTCAGCCTTTGGCAGGATaGCTACTTGCTGTTGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VTSLHGLYISSCFLTCLSQPLAG*LLAVAC Trigger: GCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTG...ACTCAAGCAGGTCAGGAAGCAGGAGCTGATGTAGAGGCCATGGAGGGATGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAAGTTCCCAGCTGCTGCTGGGCTGTCTaGAGAGAGGAAGGAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: QMNLEVSLCSPGWPQVPSCCWAV*REEGAT Trigger: AGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGCA...GCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR TCA 72 bp | CTGCCTCATCTTCTTTCATGCTGGGATTATGACCATTaGGTCAGTCAACACACCTGGCTCAGGGCACCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPHLLSCWDYDH*VSQHTWLRAPG Trigger: TCCGGGTGCCCTGAGCCAGGTGTGTTGACTGACTCAATGGTCATAATCCCAGCATGAAAGAAGATGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR CCA 72 bp | GTCAGAGGAAGCAAGCCAGTAAGTAACATCCCTCCATaGCCTCTACATCAGCTCCTGCTTCCTGACCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VRGSKPVSNIPP*PLHQLLLPDLL Trigger: AAGCAGGTCAGGAAGCAGGAGCTGATGTAGAGGCCATGGAGGGATGTTACTTACTGGCTTGCTTCCTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTGGCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCTTCTTTCATGCTGGAATGGTTCACAGCCTTaGGCAGGATTGCTACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QAGLKFPAILLPHLLSCWNGSQP*AGLLLA Trigger: AGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCATT...CCAGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGAACTTGAGGCCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACTTCCAGGCACTCTGATCTTTGTAGTCCAGAGGGTCCATGGGATTGTAGGTTGCTGCTGGGCTGTCTaGAGAGAGGAAGGAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: KLPGTLIFVVQRVHGIVGCCWAV*REEGAT Trigger: AGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGCA...ACCTACAATCCCATGGACCCTCTGGACTACAAAGATCAGAGTGCCTGGAAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGGCTGAATGGTTCACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGGCTGGAGGAGACAGCTaGAGTCCAGAAAGAGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: PEAEWFTAFGRIATCCCLAGGDS*SPERVI Trigger: AATCACTCTTTCTGGACTCAAGCTGTCTCCTCCAGC...CAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCATTCAGCCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCTTCTTTCATGCTGGGATTATGGCTACTTGCTGTTGCTaGCTGAGAGCTACTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASSSQQSSCLIFFHAGIMATCCC*LRATLL Trigger: CAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGC...CATAATCCCAGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGAACTTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAAGTTCCCAGCTGGCAGGATTGCTACTaGCTGTTGCTTGCTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QMNLEVSLCSPGWPQVPSWQDCY*LLLAES Trigger: GCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCA...GCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACCCGGAGTTCTAAGCCAAACATTCTCCAAGTCATTTGCAAGACAGATTTCCTGCTGCTGGGCTGTCTaGAGAGAGGAAGGAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: APGVLSQTFSKSFARQISCCWAV*REEGAT Trigger: AGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGCA...GGAAATCTGTCTTGCAAATGACTTGGAGAATGTTTGGCTTAGAACTCCGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR TCA 72 bp | CAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTaGGAGCTACTCTCCTGGAATCTAAGCTGGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: QPLAGLLLAVAC*ELLSWNLSWRR Trigger: TCTCCTCCAGCTTAGATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR GCA 72 bp | CTGGGCTGTCTTGAGAGAGGAAGGAGCCACTTTCATTaGTTGGGGTATGCTGTAAAGGGGCTAAGCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LGCLERGRSHFH*LGYAVKGLSSL Trigger: TAGAGAGCTTAGCCCCTTTACAGCATACCCCAAGCAATGAAAGTGGCTCCTTCCTCTCTCAAGACAGCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR GCA 72 bp | CATCAGATATGCACATCAGTCATGACCTGTACTGACTaGTGCTGGGCTGTCTTGAGAGAGGAAGGAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: HQICTSVMTCTD*CWAVLREEGAT Trigger: AGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGCAGTCAGTACAGGTCATGACTGATGTGCATATCTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR GCA 72 bp | CTGCCTTATCAGCCTTGTGGCTTGGAAAGAAGGATTTaGAGGGGTGGGAGTGCAACAGGGTTTTATGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPYQPCGLERRI*RGGSATGFYVA Trigger: GGCTACATAAAACCCTGTTGCACTCCCACCCCTGCAAATCCTTCTTTCCAAGCCACAAGGCTGATAAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR CCA 72 bp | CTCCTCATTCTATGTCCATCTGCCTTATCAGCCTTGTaGCTTGGAAAGAAGGATTTGCAGGGGTGGGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLILCPSALSAL*LGKKDLQGWEC Trigger: GCACTCCCACCCCTGCAAATCCTTCTTTCCAAGCCACAAGGCTGATAAGGCAGATGGACATAGAATGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGGGTATGCTGTAAAGGGGCTAAGCTCTCTAAAGGAGCTGAGGGTAGGAAAGCTGGAGGAGACAGCTaGAGTCCAGAAAGAGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: LGVCCKGAKLSKGAEGRKAGGDS*SPERVI Trigger: AATCACTCTTTCTGGACTCAAGCTGTCTCCTCCAGC...TTTCCTACCCTCAGCTCCTTTAGAGAGCTTAGCCCCTTTACAGCATACCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACTTTCATTGCTTGGGGTATGCTGTAAAGGGGCTAAGCTCTCTAAAGGAGTGGCAGGATTGCTACTaGCTGTTGCTTGCTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SHFHCLGYAVKGLSSLKEWQDCY*LLLAES Trigger: GCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCA...CTCCTTTAGAGAGCTTAGCCCCTTTACAGCATACCCCAAGCAATGAAAGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAAGTTCCCAGCGGAAGACTTCATCACTaGTGCCCCCTCAATCTAACC | + |
|
Preference number: 3 (lower is better) Translates to: QMNLEVSLCSPGWPQVPSGRLHH*CPLNLT Trigger: GGTTAGATTGAGGGGGCACAAGTGATGAAGTCTTCC...GCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR GCA 72 bp | TGGTTCACAGCCTTTGGCAGGATTGCTACTTGCTGTTaGTTGCTGAGAGCTACTCTCCTGGAATCTAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WFTAFGRIATCC*LLRATLLESKL Trigger: CAGCTTAGATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR GCA 72 bp | GCTGAATGGTTCACAGCCTTTGGCAGGATTGCTACTTaGTGTTGCTTGCTGAGAGCTACTCTCCTGGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: AEWFTAFGRIAT*CCLLRATLLES Trigger: AGATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCATTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR GCA 72 bp | GCACCTTTACGGAAGACTGGGGAAAAGCATCAGATATaGACATCAGTCATGACCTGTACTGACTGCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: APLRKTGEKHQI*TSVMTCTDCCW Trigger: CCAGCAGCAGTCAGTACAGGTCATGACTGATGTGCATATCTGATGCTTTTCCCCAGTCTTCCGTAAAGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR CCA 72 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTaGCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: QMNLEVSLCSPG*PQVPSNPPASS Trigger: AGATGAGGCAGGAGGATTGCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR CCA 72 bp | CATTCTATGTCCATCTGCCTTATCAGCCTTGTGGCTTaGAAAGAAGGATTTGCAGGGGTGGGAGTGCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: HSMSICLISLVA*KEGFAGVGVQQ Trigger: CTGTTGCACTCCCACCCCTGCAAATCCTTCTTTCCAAGCCACAAGGCTGATAAGGCAGATGGACATAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACTTTCATTGCTTGGGGTATGCTGTAAAGGGGCTAAGCTCTCTAAAGGAGGCTGGAGGAGACAGCTaGAGTCCAGAAAGAGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: SHFHCLGYAVKGLSSLKEAGGDS*SPERVI Trigger: AATCACTCTTTCTGGACTCAAGCTGTCTCCTCCAGC...CTCCTTTAGAGAGCTTAGCCCCTTTACAGCATACCCCAAGCAATGAAAGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACTGGCAGGATTGCTACTaGCTGTTGCTTGCTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALPEVLGSISSNYVVAHNWQDCY*LLLAES Trigger: GCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCA...GTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTGGAAAGGAGCCACTTTCATaGCTTGGGGTATGCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLWQDCYLLLLAESYSPGKEPLS*LGVCCK Trigger: TTTACAGCATACCCCAAGCAATGAAAGTGGCTCCTT...TCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | GTATACGTTTTCCAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAGCCTTTGGCAGGATaGCTACTTGCTGTTGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VYVFQMNLEVSLCSPGWPQPLAG*LLAVAC Trigger: GCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTG...AGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTGGAAAACGTATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCGGAGTTCTAAGCCAAACATTCTCCAAGTCATTTGCAAGACAGATTTCCTTTCAGCCTTTGGCAGGATaGCTACTTGCTGTTGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PGVLSQTFSKSFARQISFQPLAG*LLAVAC Trigger: GCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTG...AAAGGAAATCTGTCTTGCAAATGACTTGGAGAATGTTTGGCTTAGAACTCCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACCCGGAGTTCTAAGCCAAACATTCTCCAAGTCATTTGCAAGACAGATTTCCAATGGTTCACAGCCTTaGGCAGGATTGCTACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: APGVLSQTFSKSFARQISNGSQP*AGLLLA Trigger: AGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCATT...GGAAATCTGTCTTGCAAATGACTTGGAGAATGTTTGGCTTAGAACTCCGGGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAACTCCTATAGGCATCTGGAAGACTTCATCACTTGTGCCCCCTCAATCTAACAATGGTTCACAGCCTTaGGCAGGATTGCTACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: STPIGIWKTSSLVPPQSNNGSQP*AGLLLA Trigger: AGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCATT...GTTAGATTGAGGGGGCACAAGTGATGAAGTCTTCCAGATGCCTATAGGAGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGGCTGTCTTGAGAGAGGAAGGAGCCACTTTCATTGCTTGGGGTATGCTGCATTCTCCAAGTCATTaGCAAGACAGATTTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CWAVLREEGATFIAWGMLHSPSH*QDRFPF Trigger: AAAAGGAAATCTGTCTTGCAAATGACTTGGAGAATG...CAGCATACCCCAAGCAATGAAAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR TCA 72 bp | GAACTCATTGTCCTTCTGCCTCTACCTCCCTCGTGTTaGAATCACAAGCATGTGCCATCACTCCTGGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: ELIVLLPLPPSC*NHKHVPSLLVY Trigger: ATAAACCAGGAGTGATGGCACATGCTTGTGATTTCAACACGAGGGAGGTAGAGGCAGAAGGACAATGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTGGAGTTTTCCAAATGAATTaGGAGGTCTCACTTTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLWQDCYLLLLAESYSPGVFQMN*EVSLCS Trigger: ACTACAAAGTGAGACCTCCAAATTCATTTGGAAAAC...TCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGAACATTGACTGCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGCTACTTGCTGTTGCTaGCTGAGAGCTACTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRTLTALPEVLGSISSNYATCCC*LRATLL Trigger: CAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGC...ATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGCAGTCAATGTTCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCGGAGTTCTAAGCCAAACATTCTCCAAGTCATTTGCAAGACAGATTTCCTTTAAGGAGCCACTTTCATaGCTTGGGGTATGCTGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PGVLSQTFSKSFARQISFKEPLS*LGVCCK Trigger: TTTACAGCATACCCCAAGCAATGAAAGTGGCTCCTT...AAAGGAAATCTGTCTTGCAAATGACTTGGAGAATGTTTGGCTTAGAACTCCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR TCA 72 bp | TTGAAATCACAAGCATGTGCCATCACTCCTGGTTTATaGAATAGAATATGTCCATGGACTGGAGAGATGACT | + |
|
Preference number: 3 (lower is better) Translates to: LKSQACAITPGL*NRICPWTGEMT Trigger: AGTCATCTCTCCAGTCCATGGACATATTCTATTTCATAAACCAGGAGTGATGGCACATGCTTGTGATTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGATAACACAAGCTAGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGCATTCTCCAAGTCATTaGCAAGACAGATTTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LITQARVITEKGASVEEMHSPSH*QDRFPF Trigger: AAAAGGAAATCTGTCTTGCAAATGACTTGGAGAATG...CATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCTAGCTTGTGTTATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGGGCTCTAGAACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCACATGTTTTCCAAATGAATTaGGAGGTCTCACTTTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SWALEHSIYLSSPPQYPHVFQMN*EVSLCS Trigger: ACTACAAAGTGAGACCTCCAAATTCATTTGGAAAAC...ATGTGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTTCTAGAGCCCAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | GCTGAGAGCCGGACCCCCAAGTTGGGGCACCATGGGCGAAAGGTAGGGATCCAACCAGCTGGCTCCTGGTaGATGTGGTCCGCTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AESRTPKLGHHGRKVGIQPAGSW*MWSAPA Trigger: GGCGGGAGCGGACCACATTCACCAGGAGCCAGCTGG...TTGGATCCCTACCTTTCGCCCATGGTGCCCCAACTTGGGGGTCCGGCTCTCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCCTCAGGCAAAGGAGCCTCTGAGGCTGGACTCCAAATGGACACGGTGGCCGGGTACTGGGTCTTaGCAAACAGGGCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGPQAKEPLRLDSKWTRWPGTGS*QTGPPA Trigger: AGCTGGAGGCCCTGTTTGCCAAGACCCAGTACCCGG...CCACCGTGTCCATTTGGAGTCCAGCCTCAGAGGCTCCTTTGCCTGAGGCCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGCTGTCTTGAGAGAGGAAGGAGCCACTTTCATTGCTTGGGGTATGCTGGGCCTGAGAGGGGGCTaGGAGCCGGACCCCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CWAVLREEGATFIAWGMLGLRGG*EPDPQV Trigger: AACTTGGGGGTCCGGCTCTCAGCCCCCTCTCAGGCC...CAGCATACCCCAAGCAATGAAAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGCTGAATGGTTCACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCCAGCTGGCTCCTGGTaGATGTGGTCCGCTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEAEWFTAFGRIATCCCLPAGSW*MWSAPA Trigger: GGCGGGAGCGGACCACATTCACCAGGAGCCAGCTGG...CAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTGAACCATTCAGCCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | ATGACCTGTACTGACTGCTGCTGGGCTGTCTTGAGAGAGGAAGGAGCCACTTTCAAGGAGGTGGGGGACTaGGCCAGGGATGGCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: MTCTDCCWAVLREEGATFKEVGD*ARDGPT Trigger: TGTGGGGCCATCCCTGGCCCAGTCCCCCACCTCCTT...GAAAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGCAGTCAGTACAGGTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTGGAGGCCTGACAAGGAGGTaGGGGACTGGGCCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLWQDCYLLLLAESYSPGGLTRR*GTGPGM Trigger: CATCCCTGGCCCAGTCCCCCACCTCCTTGTCAGGCC...TCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGGCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCTTCTTTCATGCTGGCTTCCTAGGGGCACTTaGGTATGGGACAGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGLKFPAILLPHLLSCWLPRGT*VWDSLV Trigger: CACCAGGCTGTCCCATACTCAAGTGCCCCTAGGAAG...CCAGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGAACTTGAGGCCAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACTTTCATTGCTTGGGGTATGCTGTAAAGGGGCTAAGCTCTCTAAAGGAGCCAGCTGGCTCCTGGTaGATGTGGTCCGCTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHFHCLGYAVKGLSSLKEPAGSW*MWSAPA Trigger: GGCGGGAGCGGACCACATTCACCAGGAGCCAGCTGG...CTCCTTTAGAGAGCTTAGCCCCTTTACAGCATACCCCAAGCAATGAAAGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| CDS-3UTR GCA 90 bp | CACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTCCCGGGGGCTGCTGTTaGTGTTTCTGCTGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HSLWQDCYLLLLAESYSPPGGCC*CFCCCR Trigger: GCGACAGCAGCAGAAACAGCAACAGCAGCCCCCGGG...AGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | GTAAATTTCCAGGTGCCTGTGGGGTCCTTGAATTCCAGGCTGTCCACAGGACTGCTTCCTAGGGGCACTTaGGTATGGGACAGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNFQVPVGSLNSRLSTGLLPRGT*VWDSLV Trigger: CACCAGGCTGTCCCATACTCAAGTGCCCCTAGGAAG...CAGTCCTGTGGACAGCCTGGAATTCAAGGACCCCACAGGCACCTGGAAATTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
||
| CDS-3UTR TCA 90 bp | GTAAATTTCCAGGTGCCTGTGGGGTCCTTGAATTCCAGGCTGTCCACAGGACTGTCAGAGCCAAGGCATTaGCTGAATAGTGAGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VNFQVPVGSLNSRLSTGLSEPRH*LNSEAP Trigger: CGGGGCCTCACTATTCAGTCAATGCCTTGGCTCTGA...CAGTCCTGTGGACAGCCTGGAATTCAAGGACCCCACAGGCACCTGGAAATTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172758.3 |
||
| CDS-3UTR TCA 90 bp | AGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTGGATCGCCCTACGATTCTTaGACCAGACCTGGACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLWQDCYLLLLAESYSPGSPYDS*TRPGPW Trigger: CCAGGGTCCAGGTCTGGTTCAAGAATCGTAGGGCGA...TCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | ATGACCTGTACTGACTGCTGCTGGGCTGTCTTGAGAGAGGAAGGAGCCACTTTCAGGCAAAGGAGCCTCTaGGGCTGGACTCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTCTDCCWAVLREEGATFRQRSL*GWTPNG Trigger: TCCATTTGGAGTCCAGCCTCAGAGGCTCCTTTGCCT...GAAAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCAGCAGTCAGTACAGGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | CCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACTATCTGGGCCTGAGAGGGGGCTaGGAGCCGGACCCCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEVLGSISSNYVVAHNYLGLRGG*EPDPQV Trigger: AACTTGGGGGTCCGGCTCTCAGCCCCCTCTCAGGCC...CAGATAGTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCTTCTTTCATGCTGGCCACAGGACTGTAGGTaGTATAGCTCTGGCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QAGLKFPAILLPHLLSCWPQDCR*YSSGLT Trigger: TGTCAGGCCAGAGCTATAGCACCTACAGTCCTGTGG...CCAGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGAACTTGAGGCCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTGCATCAGGTCCACATTaGGGCCACTCAGAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLWQDCYLLLLAESYSPASGPH*GHSEPR Trigger: CCTTGGCTCTGAGTGGCCCCAATGTGGACCTGATGC...AGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGGGTATGCTGTAAAGGGGCTAAGCTCTCTAAAGGAGCTGAGGGTAGGAAACCGGGTACTGGGTCTTaGCAAACAGGGCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVCCKGAKLSKGAEGRKPGTGS*QTGPPA Trigger: AGCTGGAGGCCCTGTTTGCCAAGACCCAGTACCCGG...TTTCCTACCCTCAGCTCCTTTAGAGAGCTTAGCCCCTTTACAGCATACCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTTCTGCCTTCCTTTGGTGCAAGTTGGGGCACCATaGGCGAAAGGTAGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: HQLLLPDLLEFQFCLPLVQVGAP*AKGRDP Trigger: TGGATCCCTACCTTTCGCCCATGGTGCCCCAACTTG...CACCAAAGGAAGGCAGAACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | CAATCCTCCTGCCTCATCTTCTTTCATGCTGGGATTATGACCATTGAGTCAGTCGCCGGACCCCCAAGTTaGGGCACCATGGGCGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSCLIFFHAGIMTIESVAGPPS*GTMGER Trigger: CCTTTCGCCCATGGTGCCCCAACTTGGGGGTCCGGC...GACTGACTCAATGGTCATAATCCCAGCATGAAAGAAGATGAGGCAGGAGGATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTGGATCAGAGCCAAGGCATTaGCTGAATAGTGAGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLWQDCYLLLLAESYSPGSEPRH*LNSEAP Trigger: CGGGGCCTCACTATTCAGTCAATGCCTTGGCTCTGA...TCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAAGTTCCCAGCTCGCCCTACGATTCTTaGACCAGACCTGGACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QMNLEVSLCSPGWPQVPSSPYDS*TRPGPW Trigger: CCAGGGTCCAGGTCTGGTTCAAGAATCGTAGGGCGA...GCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR GCA 90 bp | GTATACGTTTTCCAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTGTCCGCTCCCGCCGCTaGTTCCTAGGGGCACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYVFQMNLEVSLCSPGWPVRSRR*FLGALE Trigger: CTCAAGTGCCCCTAGGAAGCAGCGGCGGGAGCGGAC...AGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTGGAAAACGTATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTTCTGCCTTCCTTTGGTGGCTGTCGCTGCTGTCTaGATTTCGCCCTACGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQLLLPDLLEFQFCLPLVAVAAV*ISPYDS Trigger: AGAATCGTAGGGCGAAATGCAGACAGCAGCGACAGC...CACCAAAGGAAGGCAGAACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTTCTGCCTTCCTTTGGTGTTCTGCTGCTGTCGCTaGTGTCTGCATTTCGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: HQLLLPDLLEFQFCLPLVFCCCR*CLHFAL Trigger: TAGGGCGAAATGCAGACAGCAGCGACAGCAGCAGAA...CACCAAAGGAAGGCAGAACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACCCCGGGGGCTGCTGTTaGTGTTTCTGCTGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ALPEVLGSISSNYVVAHNPGGCC*CFCCCR Trigger: GCGACAGCAGCAGAAACAGCAACAGCAGCCCCCGGG...GTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGGGTATGCTGTAAAGGGGCTAAGCTCTCTAAAGGAGCTGAGGGTAGGAAAGCATCAGGTCCACATTaGGGCCACTCAGAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVCCKGAKLSKGAEGRKASGPH*GHSEPR Trigger: CCTTGGCTCTGAGTGGCCCCAATGTGGACCTGATGC...TTTCCTACCCTCAGCTCCTTTAGAGAGCTTAGCCCCTTTACAGCATACCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGCTGTCTTGAGAGAGGAAGGAGCCACTTTCATTGCTTGGGGTATGCTGTTCTTGAACCAGACCTaGACCCTGGACTCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CWAVLREEGATFIAWGMLFLNQT*TLDSGR Trigger: TCTGCCTGAGTCCAGGGTCCAGGTCTGGTTCAAGAA...CAGCATACCCCAAGCAATGAAAGTGGCTCCTTCCTCTCTCAAGACAGCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACTATCTGAAGGAGGTGGGGGACTaGGCCAGGGATGGCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PEVLGSISSNYVVAHNYLKEVGD*ARDGPT Trigger: TGTGGGGCCATCCCTGGCCCAGTCCCCCACCTCCTT...CAGATAGTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | CCCGGAGTTCTAAGCCAAACATTCTCCAAGTCATTTGCAAGACAGATTTCCTTTGCCGGACCCCCAAGTTaGGGCACCATGGGCGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGVLSQTFSKSFARQISFAGPPS*GTMGER Trigger: CCTTTCGCCCATGGTGCCCCAACTTGGGGGTCCGGC...AAAGGAAATCTGTCTTGCAAATGACTTGGAGAATGTTTGGCTTAGAACTCCGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTACGGAAGACTGGGGAAAAGCATCAGATATGCACATCAGTCATGACCTGTGCATCAGGTCCACATTaGGGCCACTCAGAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLRKTGEKHQICTSVMTCASGPH*GHSEPR Trigger: CCTTGGCTCTGAGTGGCCCCAATGTGGACCTGATGC...ACAGGTCATGACTGATGTGCATATCTGATGCTTTTCCCCAGTCTTCCGTAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGGGCTCTAGAACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCACATGTCCGCTCCCGCCGCTaGTTCCTAGGGGCACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SWALEHSIYLSSPPQYPHVRSRR*FLGALE Trigger: CTCAAGTGCCCCTAGGAAGCAGCGGCGGGAGCGGAC...ATGTGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTTCTAGAGCCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTCAAGTTCCCAGCTGTTGCTGTTTCTGCTaGTGTCGCTGCTGTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QMNLEVSLCSPGWPQVPSCCCFC*CRCCLH Trigger: ATGCAGACAGCAGCGACAGCAGCAGAAACAGCAACA...GCTGGGAACTTGAGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| 3UTR CAA 72 bp | TTCACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTaGCTGAGAGCTACTCTCCTGGAATCTAAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTAFGRIATCCC*LRATLLESKLE Trigger: CTCCAGCTTAGATTCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR CAA 72 bp | GGCTGTCTTGAGAGAGGAAGGAGCCACTTTCATTGCTaGGGGTATGCTGTAAAGGGGCTAAGCTCTCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCLERGRSHFHC*GYAVKGLSSLK Trigger: CTTTAGAGAGCTTAGCCCCTTTACAGCATACCCCAAGCAATGAAAGTGGCTCCTTCCTCTCTCAAGACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
||
| 3UTR CAA 72 bp | TCTGCCTTATCAGCCTTGTGGCTTGGAAAGAAGGATTaGCAGGGGTGGGAGTGCAACAGGGTTTTATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SALSALWLGKKD*QGWECNRVLCS Trigger: GCTACATAAAACCCTGTTGCACTCCCACCCCTGCAAATCCTTCTTTCCAAGCCACAAGGCTGATAAGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACTTCTGCTGCTGTCGCTaGTGTCTGCATTTCGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALPEVLGSISSNYVVAHNFCCCR*CLHFAL Trigger: TAGGGCGAAATGCAGACAGCAGCGACAGCAGCAGAA...GTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGAACATTGACTGCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGGCCTGACAAGGAGGTaGGGGACTGGGCCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTALPEVLGSISSNYGLTRR*GTGPGM Trigger: CATCCCTGGCCCAGTCCCCCACCTCCTTGTCAGGCC...ATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGCAGTCAATGTTCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGCATGTGCCATCACTCCTGGTTTATGAAATAGAATATGTCCATGGACTGTCAGAGCCAAGGCATTaGCTGAATAGTGAGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HKHVPSLLVYEIEYVHGLSEPRH*LNSEAP Trigger: CGGGGCCTCACTATTCAGTCAATGCCTTGGCTCTGA...CAGTCCATGGACATATTCTATTTCATAAACCAGGAGTGATGGCACATGCTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGCATGTGCCATCACTCCTGGTTTATGAAATAGAATATGTCCATGGACTGAGGCAAAGGAGCCTCTaGGGCTGGACTCCAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: HKHVPSLLVYEIEYVHGLRQRSL*GWTPNG Trigger: TCCATTTGGAGTCCAGCCTCAGAGGCTCCTTTGCCT...CAGTCCATGGACATATTCTATTTCATAAACCAGGAGTGATGGCACATGCTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR GCA 90 bp | AACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCACATCAAGCTTCTTTTGGTCCGCTCCCGCCGCTaGTTCCTAGGGGCACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: NILFIFQVLPNIHIKLLLVRSRR*FLGALE Trigger: CTCAAGTGCCCCTAGGAAGCAGCGGCGGGAGCGGAC...CAAAAGAAGCTTGATGTGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CCA 90 bp | GTATACGTTTTCCAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTTTCTTGAACCAGACCTaGACCCTGGACTCAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VYVFQMNLEVSLCSPGWPFLNQT*TLDSGR Trigger: TCTGCCTGAGTCCAGGGTCCAGGTCTGGTTCAAGAA...AGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTGGAAAACGTATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CCA 90 bp | TTAAGAACATTGACTGCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATACTAGGCCGGCTCTCTaGGCCTCAGGCAAAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LRTLTALPEVLGSISSNYTRPAL*ASGKGA Trigger: GGCTCCTTTGCCTGAGGCCCAGAGAGCCGGCCTAGT...ATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGCAGTCAATGTTCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR GCA 90 bp | TCTGCCTTATCAGCCTTGTGGCTTGGAAAGAAGGATTTGCAGGGGTGGGAGTGCTGTAAGAATCTGAGATaGCCAAAGGATCTGTACAAA | + |
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Preference number: 4 (lower is better) Translates to: SALSALWLGKKDLQGWECCKNLR*PKDLYK Trigger: TTTGTACAGATCCTTTGGGCATCTCAGATTCTTACA...GCACTCCCACCCCTGCAAATCCTTCTTTCCAAGCCACAAGGCTGATAAGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR GCA 90 bp | CATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTTCTGCCTTCCTTTGGTGTGTAAGAATCTGAGATaGCCAAAGGATCTGTACAAA | + |
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Preference number: 4 (lower is better) Translates to: HQLLLPDLLEFQFCLPLVCKNLR*PKDLYK Trigger: TTTGTACAGATCCTTTGGGCATCTCAGATTCTTACA...CACCAAAGGAAGGCAGAACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR TCA 90 bp | GCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACTCATATATGCCATCATaGTCTTCAGAGACTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: ALPEVLGSISSNYVVAHNSYMPS*SSETVA Trigger: GGCCACAGTCTCTGAAGATCATGATGGCATATATGA...GTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174318.8 |
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| CDS-3UTR GCA 90 bp | TCAACTCCTATAGGCATCTGGAAGACTTCATCACTTGTGCCCCCTCAATCTAACCCCCGGGTTCATATATaGCATCATGATCTTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: STPIGIWKTSSLVPPQSNPRVHI*HHDLQR Trigger: TCTCTGAAGATCATGATGGCATATATGAACCCGGGG...GTTAGATTGAGGGGGCACAAGTGATGAAGTCTTCCAGATGCCTATAGGAGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174318.8 |
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| CDS-3UTR CCA 90 bp | TTAAGAACATTGACTGCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATAGGCTGGACTCCAAATaGACACGGTGGCCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRTLTALPEVLGSISSNYRLDSK*TRWPLL Trigger: CAGCAGTGGCCACCGTGTCCATTTGGAGTCCAGCCT...ATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGCAGTCAATGTTCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR TCA 90 bp | CACAAGCATGTGCCATCACTCCTGGTTTATGAAATAGAATATGTCCATGGACTGAGGGATCCAACCCACTaGAATAGGAACTTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: HKHVPSLLVYEIEYVHGLRDPTH*NRNLEM Trigger: CATCTCCAAGTTCCTATTTCAGTGGGTTGGATCCCT...CAGTCCATGGACATATTCTATTTCATAAACCAGGAGTGATGGCACATGCTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR TCA 90 bp | CCCGGAGTTCTAAGCCAAACATTCTCCAAGTCATTTGCAAGACAGATTTCCTTTAGGGATCCAACCCACTaGAATAGGAACTTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: PGVLSQTFSKSFARQISFRDPTH*NRNLEM Trigger: CATCTCCAAGTTCCTATTTCAGTGGGTTGGATCCCT...AAAGGAAATCTGTCTTGCAAATGACTTGGAGAATGTTTGGCTTAGAACTCCGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR TCA 90 bp | AACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCACATCAAGCTTCTTTTGTGCCTGTGGGGTCCTTaGATTCCAGGCTGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: NILFIFQVLPNIHIKLLLCLWGP*IPGCPQ Trigger: CTGTGGACAGCCTGGAATTCAAGGACCCCACAGGCA...CAAAAGAAGCTTGATGTGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR GCA 90 bp | TTGATAACACAAGCTAGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGGCTGTCGCTGCTGTCTaGATTTCGCCCTACGATTCT | + |
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Preference number: 4 (lower is better) Translates to: LITQARVITEKGASVEEMAVAAV*ISPYDS Trigger: AGAATCGTAGGGCGAAATGCAGACAGCAGCGACAGC...CATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCTAGCTTGTGTTATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CCA 90 bp | AACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCACATCAAGCTTCTTTTGAGGCTGGACTCCAAATaGACACGGTGGCCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NILFIFQVLPNIHIKLLLRLDSK*TRWPLL Trigger: CAGCAGTGGCCACCGTGTCCATTTGGAGTCCAGCCT...CAAAAGAAGCTTGATGTGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR CAA 72 bp | TACCCAGGTATACCCATGAATAAGACTTCCAGCCTCTaGAGATTCAACTCCTATAGGCATCTGGAAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: YPGIPMNKTSSL*RFNSYRHLEDF Trigger: GAAGTCTTCCAGATGCCTATAGGAGTTGAATCTCAAGAGGCTGGAAGTCTTATTCATGGGTATACCTGGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| 3UTR CAA 72 bp | CCATGGACTGGAGAGATGACTCAGCAATTAAGAACATaGACTGCTCTTCCAGAAGTCCTAGGTTCAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: PWTGEMTQQLRT*TALPEVLGSIS Trigger: GGAAATTGAACCTAGGACTTCTGGAAGAGCAGTCAATGTTCTTAATTGCTGAGTCATCTCTCCAGTCCATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR GCA 90 bp | TTAAGAACATTGACTGCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATCCACAGGACTGTAGGTaGTATAGCTCTGGCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: LRTLTALPEVLGSISSNYPQDCR*YSSGLT Trigger: TGTCAGGCCAGAGCTATAGCACCTACAGTCCTGTGG...ATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGCAGTCAATGTTCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CCA 90 bp | AACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCACATCAAGCTTCTTTTGCAAGTTGGGGCACCATaGGCGAAAGGTAGGGATCCA | + |
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Preference number: 4 (lower is better) Translates to: NILFIFQVLPNIHIKLLLQVGAP*AKGRDP Trigger: TGGATCCCTACCTTTCGCCCATGGTGCCCCAACTTG...CAAAAGAAGCTTGATGTGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS CCA 90 bp | CGCTCCCGCCGCTGCTTCCTAGGGGCACTTGAGTATGGGACAGCCTaGTGCATCAGGTCCACATTGGGGCCACTCAGAGCCAAGGCATTG | + |
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Preference number: 5 (lower is better) Translates to: RSRRCFLGALEYGTA*CIRSTLGPLRAKAL Trigger: CAATGCCTTGGCTCTGAGTGGCCCCAATGTGGACCTGATGCACCAGGCTGTCCCATACTCAAGTGCCCCTAGGAAGCAGCGGCGGGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044434.13 ENSMUST00000132563.2 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | GTAACATCCCTCCATGGCCTCTACATCAGCTCCTGCTTCCTGACCTGCTTGAGTAGCCGGACCCCCAAGTaGGGGCACCATGGGCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: VTSLHGLYISSCFLTCLSSRTPK*GHHGRK Trigger: CTTTCGCCCATGGTGCCCCAACTTGGGGGTCCGGCT...ACTCAAGCAGGTCAGGAAGCAGGAGCTGATGTAGAGGCCATGGAGGGATGTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | CACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTCCCCGGGGGCTGCTGTaGCTGTTTCTGCTGCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: HSLWQDCYLLLLAESYSPPRGLL*LFLLLS Trigger: CGACAGCAGCAGAAACAGCAACAGCAGCCCCCGGGG...AGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | CACAGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTTGCATCAGGTCCACATaGGGGCCACTCAGAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: HSLWQDCYLLLLAESYSPCIRST*GPLRAK Trigger: CTTGGCTCTGAGTGGCCCCAATGTGGACCTGATGCA...AGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | GCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCTTCTTTCATGCTGGGATTATGTGCATCAGGTCCACATaGGGGCCACTCAGAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: ASSSQQSSCLIFFHAGIMCIRST*GPLRAK Trigger: CTTGGCTCTGAGTGGCCCCAATGTGGACCTGATGCA...CATAATCCCAGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGAACTTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | GTATACGTTTTCCAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTAGCCGGACCCCCAAGTaGGGGCACCATGGGCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: VYVFQMNLEVSLCSPGWPSRTPK*GHHGRK Trigger: CTTTCGCCCATGGTGCCCCAACTTGGGGGTCCGGCT...AGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTGGAAAACGTATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | AGCCACTTTCATTGCTTGGGGTATGCTGTAAAGGGGCTAAGCTCTCTAAAGGAGTGCATCAGGTCCACATaGGGGCCACTCAGAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SHFHCLGYAVKGLSSLKECIRST*GPLRAK Trigger: CTTGGCTCTGAGTGGCCCCAATGTGGACCTGATGCA...CTCCTTTAGAGAGCTTAGCCCCTTTACAGCATACCCCAAGCAATGAAAGTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044434.13 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | GCCTCAAGTTCCCAGCAATCCTCCTGCCTCATCTTCTTTCATGCTGGGATTATGTTCGCCCTACGATTCTaGAACCAGACCTGGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: ASSSQQSSCLIFFHAGIMFALRF*NQTWTL Trigger: CAGGGTCCAGGTCTGGTTCAAGAATCGTAGGGCGAA...CATAATCCCAGCATGAAAGAAGATGAGGCAGGAGGATTGCTGGGAACTTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | AGCCTTTGGCAGGATTGCTACTTGCTGTTGCTTGCTGAGAGCTACTCTCCTGGACAGATGAGGGCACCTTaGAAAGAGCAGTCAGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SLWQDCYLLLLAESYSPGQMRAP*KEQSVF Trigger: GAACACTGACTGCTCTTTCAAAGGTGCCCTCATCTG...TCCAGGAGAGTAGCTCTCAGCAAGCAACAGCAAGTAGCAATCCTGCCAAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | TCTTGGGCTCTAGAACATTCTATTTATCTTTCAAGTCCTCCCCAATATCCACATCCCCGGGGGCTGCTGTaGCTGTTTCTGCTGCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: SWALEHSIYLSSPPQYPHPRGLL*LFLLLS Trigger: CGACAGCAGCAGAAACAGCAACAGCAGCCCCCGGGG...ATGTGGATATTGGGGAGGACTTGAAAGATAAATAGAATGTTCTAGAGCCCAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | GTATACGTTTTCCAAATGAATTTGGAGGTCTCACTTTGTAGTCCAGGCTGGCCTTTCGCCCTACGATTCTaGAACCAGACCTGGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: VYVFQMNLEVSLCSPGWPFALRF*NQTWTL Trigger: CAGGGTCCAGGTCTGGTTCAAGAATCGTAGGGCGAA...AGGCCAGCCTGGACTACAAAGTGAGACCTCCAAATTCATTTGGAAAACGTATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | GCTCTTCCAGAAGTCCTAGGTTCAATTTCCAGTAACTATGTGGTGGCTCACAACCTGGACTCAGGCAGATaGATCTTAAGAGCAACCTCC | + |
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Preference number: 5 (lower is better) Translates to: ALPEVLGSISSNYVVAHNLDSGR*ILRATS Trigger: GGAGGTTGCTCTTAAGATCAATCTGCCTGAGTCCAG...GTTGTGAGCCACCACATAGTTACTGGAAATTGAACCTAGGACTTCTGGAAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS-3UTR CAA 90 bp | TTGATAACACAAGCTAGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGCTGGACTCAGGCAGATaGATCTTAAGAGCAACCTCC | + |
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Preference number: 5 (lower is better) Translates to: LITQARVITEKGASVEEMLDSGR*ILRATS Trigger: GGAGGTTGCTCTTAAGATCAATCTGCCTGAGTCCAG...CATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCTAGCTTGTGTTATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044434.13 ENSMUST00000174318.8 |
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| CDS CCA 72 bp | CGCTGCTTCCTAGGGGCACTTGAGTATGGGACAGCCTaGTGCATCAGGTCCACATTGGGGCCACTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RCFLGALEYGTA*CIRSTLGPLRA Trigger: GGCTCTGAGTGGCCCCAATGTGGACCTGATGCACCAGGCTGTCCCATACTCAAGTGCCCCTAGGAAGCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044434.13 ENSMUST00000132563.2 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| CDS GCA 72 bp | TGCTTCCTAGGGGCACTTGAGTATGGGACAGCCTGGTaGATCAGGTCCACATTGGGGCCACTCAGAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: CFLGALEYGTAW*IRSTLGPLRAK Trigger: CTTGGCTCTGAGTGGCCCCAATGTGGACCTGATGCACCAGGCTGTCCCATACTCAAGTGCCCCTAGGAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044434.13 ENSMUST00000132563.2 ENSMUST00000172758.3 ENSMUST00000174318.8 |
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| CDS TCA 72 bp | CTGAATAGTGAGGCCCCGGGTTCATATATGCCATCATaGTCTTCAGAGACTGTGGCCCAGATGAGGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: LNSEAPGSYMPS*SSETVAQMRAP Trigger: AGGTGCCCTCATCTGGGCCACAGTCTCTGAAGATCATGATGGCATATATGAACCCGGGGCCTCACTATTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174318.8 |
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