Pregenerated sensors for CRTC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030527Ensembl transcript IDs: ENSMUST00000122255.8, ENSMUST00000127326.2, ENSMUST00000149176.2
Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CAGCAGAGACTGGGGCACGTGGCCGCACAGCTCCACCCGGCTGTCTaGAGAGCCGCGGTGTGGGGAGCTGGAGCAGCCTCTGATTCCCAG | + |
Preference number: 1 (lower is better) Translates to: QQRLGHVAAQLHPAV*RAAVWGAGAASDSQ Trigger: CTGGGAATCAGAGGCTGCTCCAGCTCCCCACACCGCGGCTCTTCAGACAGCCGGGTGGAGCTGTGCGGCCACGTGCCCCAGTCTCTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | TTGAGGTCTGCAGGGCAGCTGGGGAGAAGGGCAGTTCAGCTGCCCTaGACTAATACGAGTCCCAGCAGCTCCTTCCAGTGGGCTGGAGGG | + |
Preference number: 1 (lower is better) Translates to: LRSAGQLGRRAVQLP*TNTSPSSSFQWAGG Trigger: CCCTCCAGCCCACTGGAAGGAGCTGCTGGGACTCGTATTAGTGCAGGGCAGCTGAACTGCCCTTCTCCCCAGCTGCCCTGCAGACCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | CCTCGCCTCAGGCACAGATGGGTCAGCTTCCTTCTACTCCACCCTTaGTCTCCTGGGTGGGGACAGCCACTGAGCCTCAGCTTCAGCCCA | + |
Preference number: 1 (lower is better) Translates to: PRLRHRWVSFLLLHP*SPGWGQPLSLSFSP Trigger: TGGGCTGAAGCTGAGGCTCAGTGGCTGTCCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTGCCTGAGGCGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | GAGTCATGGCAGCTGGAAGGTTGCCCACGCTGTTCCCCACACTCATaGTACCAAAGAGGTGGTCGCTGGTGTCCAGGGAGGCTGGCAGGG | + |
Preference number: 1 (lower is better) Translates to: ESWQLEGCPRCSPHS*YQRGGRWCPGRLAG Trigger: CCCTGCCAGCCTCCCTGGACACCAGCGACCACCTCTTTGGTAGCATGAGTGTGGGGAACAGCGTGGGCAACCTTCCAGCTGCCATGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR CCA 90 bp | GTTAGACCGCCCCACCACGAGGCACAGTCCCTCTCTCCTCCATCCTaGGTACATGCACTCCTACCAGGCACTTGGTGGGCACTAGGGGTC | + |
Preference number: 1 (lower is better) Translates to: VRPPHHEAQSLSPPS*VHALLPGTWWALGV Trigger: GACCCCTAGTGCCCACCAAGTGCCTGGTAGGAGTGCATGTACCCAGGATGGAGGAGAGAGGGACTGTGCCTCGTGGTGGGGCGGTCTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 90 bp | TGCCCACGCTGTTCCCCACACTCATGCTACCAAAGAGGTGGTCGCTaGTGTCCAGGGAGGCTGGCAGGGGTGCTGAGTAGTGGAGGTTGG | + |
Preference number: 1 (lower is better) Translates to: CPRCSPHSCYQRGGR*CPGRLAGVLSSGGW Trigger: CCAACCTCCACTACTCAGCACCCCTGCCAGCCTCCCTGGACACCAGCGACCACCTCTTTGGTAGCATGAGTGTGGGGAACAGCGTGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR TCA 90 bp | GGCCCAGTCTGGATGCCAGGTGCCCCACACTCCTGGGGCTTGGTGTaGTCAGCCATGCTGGATGCACTGGATGATGTCCACCTAGCTGCT | + |
Preference number: 1 (lower is better) Translates to: GPVWMPGAPHSWGLV*SAMLDALDDVHLAA Trigger: AGCAGCTAGGTGGACATCATCCAGTGCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGCATCCAGACTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | TCCGAGAGGAAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTaGCCCACACTCCTGGGGCTTGGTGTGATCAGCCATGCTGGATGC | + |
Preference number: 1 (lower is better) Translates to: SERKNLLWGPSLDAR*PTLLGLGVISHAGC Trigger: GCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTTCCTCTCGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | TGGGGTGAGATCTCCCGTTACGCCTTCACCAGAGGACAGCAGCTGTaGAAGCAGGGATTCTCCTTCAGGGTCCTCCCCCTCCTGACCCTG | + |
Preference number: 1 (lower is better) Translates to: WGEISRYAFTRGQQL*KQGFSFRVLPLLTL Trigger: CAGGGTCAGGAGGGGGAGGACCCTGAAGGAGAATCCCTGCTTGCACAGCTGCTGTCCTCTGGTGAAGGCGTAACGGGAGATCTCACCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | GTTCAGTGGGCTGGTCGCAGAGAGCTGTCTGCTGAAGCCTTGATGTaGTTCAGGGCCAGGAGAGAGCGTGAGAGGGCTGACTGGAGGCTG | + |
Preference number: 1 (lower is better) Translates to: VQWAGRRELSAEALM*FRARRERERADWRL Trigger: CAGCCTCCAGTCAGCCCTCTCACGCTCTCTCCTGGCCCTGAAGCACATCAAGGCTTCAGCAGACAGCTCTCTGCGACCAGCCCACTGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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3UTR TCA 90 bp | TACGGGTTCAGTGGGCTGGTCGCAGAGAGCTGTCTGCTGAAGCCTTaGTGTGCTTCAGGGCCAGGAGAGAGCGTGAGAGGGCTGACTGGA | + |
Preference number: 1 (lower is better) Translates to: YGFSGLVAESCLLKP*CASGPGESVRGLTG Trigger: TCCAGTCAGCCCTCTCACGCTCTCTCCTGGCCCTGAAGCACATCAAGGCTTCAGCAGACAGCTCTCTGCGACCAGCCCACTGAACCCGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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3UTR GCA 90 bp | GCCCCACCACGAGGCACAGTCCCTCTCTCCTCCATCCTGGGTACATaGACTCCTACCAGGCACTTGGTGGGCACTAGGGGTCAATACAGA | + |
Preference number: 1 (lower is better) Translates to: APPRGTVPLSSILGT*TPTRHLVGTRGQYR Trigger: TCTGTATTGACCCCTAGTGCCCACCAAGTGCCTGGTAGGAGTGCATGTACCCAGGATGGAGGAGAGAGGGACTGTGCCTCGTGGTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 90 bp | CACAGATGGGTCAGCTTCCTTCTACTCCACCCTTGCTCTCCTGGGTaGGGACAGCCACTGAGCCTCAGCTTCAGCCCATGTCGCAGGAAG | + |
Preference number: 1 (lower is better) Translates to: HRWVSFLLLHPCSPG*GQPLSLSFSPCRRK Trigger: CTTCCTGCGACATGGGCTGAAGCTGAGGCTCAGTGGCTGTCCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 90 bp | AAGGTGTTTGCTGGCTGTGACCACTGTCAGGGTGTTTGCTGGCTGTaGCCACCGGCAGGGTGTTTGCTGGCTCCACCCCAGCTTTCTCTG | + |
Preference number: 1 (lower is better) Translates to: KVFAGCDHCQGVCWL*PPAGCLLAPPQLSL Trigger: CAGAGAAAGCTGGGGTGGAGCCAGCAAACACCCTGCCGGTGGTCACAGCCAGCAAACACCCTGACAGTGGTCACAGCCAGCAAACACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | ACATGGTCAGCTTCCTGGTCACCGGAAGCTCCAAAGCAGCTGGCCTaGAGCAGTACAACTGGTGCCATGGGCCGAAGAGTGCAGCTGTGT | + |
Preference number: 1 (lower is better) Translates to: TWSASWSPEAPKQLA*SSTTGAMGRRVQLC Trigger: ACACAGCTGCACTCTTCGGCCCATGGCACCAGTTGTACTGCTGCAGGCCAGCTGCTTTGGAGCTTCCGGTGACCAGGAAGCTGACCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | AACAAAAGGCCGGGAGTTAGGACACTGGCCGGAAGTCTGACTAGCTaGTGGGATGGCCCCGTTCTGGAGCAGTGGGAACACTGGGAACCA | + |
Preference number: 1 (lower is better) Translates to: NKRPGVRTLAGSLTS*WDGPVLEQWEHWEP Trigger: TGGTTCCCAGTGTTCCCACTGCTCCAGAACGGGGCCATCCCAGCAGCTAGTCAGACTTCCGGCCAGTGTCCTAACTCCCGGCCTTTTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 90 bp | ACTGTCAGGGTGTTTGCTGGCTGTGACCACCGGCAGGGTGTTTGCTaGCTCCACCCCAGCTTTCTCTGGCCATTTCAGTTCCCCAGTTCC | + |
Preference number: 1 (lower is better) Translates to: TVRVFAGCDHRQGVC*LHPSFLWPFQFPSS Trigger: GGAACTGGGGAACTGAAATGGCCAGAGAAAGCTGGGGTGGAGCCAGCAAACACCCTGCCGGTGGTCACAGCCAGCAAACACCCTGACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 90 bp | AAAAGGCCGGGAGTTAGGACACTGGCCGGAAGTCTGACTAGCTGCTaGGATGGCCCCGTTCTGGAGCAGTGGGAACACTGGGAACCATCT | + |
Preference number: 1 (lower is better) Translates to: KRPGVRTLAGSLTSC*DGPVLEQWEHWEPS Trigger: AGATGGTTCCCAGTGTTCCCACTGCTCCAGAACGGGGCCATCCCAGCAGCTAGTCAGACTTCCGGCCAGTGTCCTAACTCCCGGCCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | CGATCTCTGCCTGAAGACGGACACGGGAGCTGGCTTGAGTGTGTATaGTGGGGCGCTGGGCAGCTCAGAGGAGTGAAAAGCTTCCACTTT | + |
Preference number: 1 (lower is better) Translates to: RSLPEDGHGSWLECV*WGAGQLRGVKSFHF Trigger: AAAGTGGAAGCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCTCCCGTGTCCGTCTTCAGGCAGAGATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | GTTGGCCACAGACGGCTGCGGGTGGCACTTGAGGGACGAGGAGAGTaGCATCTTACTGAGTGTGGCTTGGATGGAAGGGTTACTTCGAGA | + |
Preference number: 1 (lower is better) Translates to: VGHRRLRVALEGRGE*HLTECGLDGRVTSR Trigger: TCTCGAAGTAACCCTTCCATCCAAGCCACACTCAGTAAGATGGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGCCGTCTGTGGCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR CCA 90 bp | CTTTTACATCAGCATCGATCTCTGCCTGAAGACGGACACGGGAGCTaGCTTGAGTGTGTATGCTGGGGCGCTGGGCAGCTCAGAGGAGTG | + |
Preference number: 1 (lower is better) Translates to: LLHQHRSLPEDGHGS*LECVCWGAGQLRGV Trigger: CACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCTCCCGTGTCCGTCTTCAGGCAGAGATCGATGCTGATGTAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 90 bp | GCTGGCTTGAGTGTGTATGCTGGGGCGCTGGGCAGCTCAGAGGAGTaGAAAGCTTCCACTTTAACTAAAGTCACCCCGGGTGCTCTGGGA | + |
Preference number: 1 (lower is better) Translates to: AGLSVYAGALGSSEE*KASTLTKVTPGALG Trigger: TCCCAGAGCACCCGGGGTGACTTTAGTTAAAGTGGAAGCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | AGTGGAGGTTGGTTAGATCTGGTAACGACCCTCCGGTGTTCAGGGTaGCCAGGAACGGTGAGAGGCCTGTGTTCTGGCCATTATGTGGGA | + |
Preference number: 1 (lower is better) Translates to: SGGWLDLVTTLRCSG*PGTVRGLCSGHYVG Trigger: TCCCACATAATGGCCAGAACACAGGCCTCTCACCGTTCCTGGGCACCCTGAACACCGGAGGGTCGTTACCAGATCTAACCAACCTCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR CCA 90 bp | GCCGGAAGTCTGACTAGCTGCTGGGATGGCCCCGTTCTGGAGCAGTaGGAACACTGGGAACCATCTGTGCATAAATCAGAAGAGCCCAAC | + |
Preference number: 1 (lower is better) Translates to: AGSLTSCWDGPVLEQ*EHWEPSVHKSEEPN Trigger: GTTGGGCTCTTCTGATTTATGCACAGATGGTTCCCAGTGTTCCCACTGCTCCAGAACGGGGCCATCCCAGCAGCTAGTCAGACTTCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 90 bp | TATTGCTTAACAAAAGGCCGGGAGTTAGGACACTGGCCGGAAGTCTaGCTAGCTGCTGGGATGGCCCCGTTCTGGAGCAGTGGGAACACT | + |
Preference number: 1 (lower is better) Translates to: YCLTKGRELGHWPEV*LAAGMAPFWSSGNT Trigger: AGTGTTCCCACTGCTCCAGAACGGGGCCATCCCAGCAGCTAGTCAGACTTCCGGCCAGTGTCCTAACTCCCGGCCTTTTGTTAAGCAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 90 bp | TTGGAGACCAGAGGAGGTTCTTATCCCCAGGTGAGTCATGGCAGCTaGAAGGTTGCCCACGCTGTTCCCCACACTCATGCTACCAAAGAG | + |
Preference number: 1 (lower is better) Translates to: LETRGGSYPQVSHGS*KVAHAVPHTHATKE Trigger: CTCTTTGGTAGCATGAGTGTGGGGAACAGCGTGGGCAACCTTCCAGCTGCCATGACTCACCTGGGGATAAGAACCTCCTCTGGTCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR CCA 90 bp | GAGAACTTTGGAGACCAGAGGAGGTTCTTATCCCCAGGTGAGTCATaGCAGCTGGAAGGTTGCCCACGCTGTTCCCCACACTCATGCTAC | + |
Preference number: 1 (lower is better) Translates to: ENFGDQRRFLSPGES*QLEGCPRCSPHSCY Trigger: GTAGCATGAGTGTGGGGAACAGCGTGGGCAACCTTCCAGCTGCCATGACTCACCTGGGGATAAGAACCTCCTCTGGTCTCCAAAGTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR TCA 90 bp | TTACTTCGAGAACTTTGGAGACCAGAGGAGGTTCTTATCCCCAGGTaGGTCATGGCAGCTGGAAGGTTGCCCACGCTGTTCCCCACACTC | + |
Preference number: 1 (lower is better) Translates to: LLRELWRPEEVLIPR*VMAAGRLPTLFPTL Trigger: GAGTGTGGGGAACAGCGTGGGCAACCTTCCAGCTGCCATGACTCACCTGGGGATAAGAACCTCCTCTGGTCTCCAAAGTTCTCGAAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR GCA 90 bp | AGTGAGCAAACAGGTCTCCCTCTCCTCCTGTCTGTGAGGGAAAGGTaGGCATACAGGAAGCAGCAGCAAAGAGATCATAAACCGGGAGGA | + |
Preference number: 1 (lower is better) Translates to: SEQTGLPLLLSVRER*AYRKQQQRDHKPGG Trigger: TCCTCCCGGTTTATGATCTCTTTGCTGCTGCTTCCTGTATGCGCACCTTTCCCTCACAGACAGGAGGAGAGGGAGACCTGTTTGCTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 90 bp | CTGACTAGCTGCTGGGATGGCCCCGTTCTGGAGCAGTGGGAACACTaGGAACCATCTGTGCATAAATCAGAAGAGCCCAACAGGAAATGT | + |
Preference number: 1 (lower is better) Translates to: LTSCWDGPVLEQWEH*EPSVHKSEEPNRKC Trigger: ACATTTCCTGTTGGGCTCTTCTGATTTATGCACAGATGGTTCCCAGTGTTCCCACTGCTCCAGAACGGGGCCATCCCAGCAGCTAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | CACTTGGTGGGCACTAGGGGTCAATACAGAACAAGGCACAGTTCCTaGCCTCTGGGAGCTTACAGTCTAGTGGGCATTGCATTAAACTTG | + |
Preference number: 1 (lower is better) Translates to: HLVGTRGQYRTRHSS*PLGAYSLVGIALNL Trigger: CAAGTTTAATGCAATGCCCACTAGACTGTAAGCTCCCAGAGGGCAGGAACTGTGCCTTGTTCTGTATTGACCCCTAGTGCCCACCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 90 bp | GACACGATGATCCCACGGATCAGGCTCAACGCAGAGAGCAGATTGTaGTGGAAACCCCTTCCTCTCAACTTTTACATCAGCATCGATCTC | + |
Preference number: 1 (lower is better) Translates to: DTMIPRIRLNAESRL*WKPLPLNFYISIDL Trigger: GAGATCGATGCTGATGTAAAAGTTGAGAGGAAGGGGTTTCCAGCACAATCTGCTCTCTGCGTTGAGCCTGATCCGTGGGATCATCGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 90 bp | GGGAGGAAGCAAACTGCCTTCAGTTTGCCTAACTTAAGCCTGCCCTaGGACGGCTGGGTAAGCTTCTTCATTTTAAGTGAGCCATTGGAC | + |
Preference number: 1 (lower is better) Translates to: GRKQTAFSLPNLSLP*DGWVSFFILSEPLD Trigger: GTCCAATGGCTCACTTAAAATGAAGAAGCTTACCCAGCCGTCCCAGGGCAGGCTTAAGTTAGGCAAACTGAAGGCAGTTTGCTTCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 90 bp | ACGATGATCCCACGGATCAGGCTCAACGCAGAGAGCAGATTGTGCTaGAAACCCCTTCCTCTCAACTTTTACATCAGCATCGATCTCTGC | + |
Preference number: 1 (lower is better) Translates to: TMIPRIRLNAESRLC*KPLPLNFYISIDLC Trigger: GCAGAGATCGATGCTGATGTAAAAGTTGAGAGGAAGGGGTTTCCAGCACAATCTGCTCTCTGCGTTGAGCCTGATCCGTGGGATCATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 90 bp | CAAACTGCCTTCAGTTTGCCTAACTTAAGCCTGCCCTGGGACGGCTaGGTAAGCTTCTTCATTTTAAGTGAGCCATTGGACAGAGTGATG | + |
Preference number: 1 (lower is better) Translates to: QTAFSLPNLSLPWDG*VSFFILSEPLDRVM Trigger: CATCACTCTGTCCAATGGCTCACTTAAAATGAAGAAGCTTACCCAGCCGTCCCAGGGCAGGCTTAAGTTAGGCAAACTGAAGGCAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 90 bp | TTTGGAGCACTGACGTGTTACACAGCATTTTCTACATTTACACACTaGCTGACTGGATGGCCAATAAAGAGAATTAAGGGTGACATGGTC | + |
Preference number: 1 (lower is better) Translates to: FGALTCYTAFSTFTH*LTGWPIKRIKGDMV Trigger: GACCATGTCACCCTTAATTCTCTTTATTGGCCATCCAGTCAGTCAGTGTGTAAATGTAGAAAATGCTGTGTAACACGTCAGTGCTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR GCA 90 bp | TCTGAGGTCACCATCTGGGAGGCAGGATACGGGTTCAGTGGGCTGGTCGCAGAGGGGCTGACTGGAGGCTaGCTGCGCCGAGAGGGGCCA | + |
Preference number: 2 (lower is better) Translates to: SEVTIWEAGYGFSGLVAEGLTGG*LRREGP Trigger: TGGCCCCTCTCGGCGCAGGCAGCCTCCAGTCAGCCC...CTCTGCGACCAGCCCACTGAACCCGTATCCTGCCTCCCAGATGGTGACCTCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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3UTR-3UTR TCA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTCTCCACCCGGCTGTCTaGAGAGCCGCGGTGTGGGGA | + |
Preference number: 2 (lower is better) Translates to: GGREQGKGELILTSPHTRLHPAV*RAAVWG Trigger: TCCCCACACCGCGGCTCTTCAGACAGCCGGGTGGAG...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTAGCAGCTCCTTCCAGTaGGCTGGAGGGTGGCAGGCC | + |
Preference number: 2 (lower is better) Translates to: GGREQGKGELILTSPHTRSSSFQ*AGGWQA Trigger: GGCCTGCCACCCTCCAGCCCACTGGAAGGAGCTGCT...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | TCACCATCTGGGAGGCAGGATACGGGTTCAGTGGGCTGGTCGCAGAGAGCTGTCCGTGAGAGGGCTGACTaGAGGCTGCCTGCGCCGAGA | + |
Preference number: 2 (lower is better) Translates to: SPSGRQDTGSVGWSQRAVRERAD*RLPAPR Trigger: TCTCGGCGCAGGCAGCCTCCAGTCAGCCCTCTCACG...GACAGCTCTCTGCGACCAGCCCACTGAACCCGTATCCTGCCTCCCAGATGGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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3UTR CAA 90 bp | AACTGGTGCCATGGGCCGAAGAGTGCAGCTGTGTCTAGCAAAGCCTaGGCTGAGCTCAGTGGAGAGCCCGGGGCAGCGGCTCCCTCTATG | + |
Preference number: 2 (lower is better) Translates to: NWCHGPKSAAVSSKA*AELSGEPGAAAPSM Trigger: CATAGAGGGAGCCGCTGCCCCGGGCTCTCCACTGAGCTCAGCCAAGGCTTTGCTAGACACAGCTGCACTCTTCGGCCCATGGCACCAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 90 bp | TCCTCGCCTCAGGCACAGATGGGTCAGCTTCCTTCTACTCCACCCTaGCTCTCCTGGGTGGGGACAGCCACTGAGCCTCAGCTTCAGCCC | + |
Preference number: 2 (lower is better) Translates to: SSPQAQMGQLPSTPP*LSWVGTATEPQLQP Trigger: GGGCTGAAGCTGAGGCTCAGTGGCTGTCCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTGCCTGAGGCGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | CGAGAGGAAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTGCCCCACACTAGCTGGAGGGCTGCCTaGCCTTGGCGGTCAGACAGA | + |
Preference number: 2 (lower is better) Translates to: REEEFAVGAQSGCQVPHTSWRAA*PWRSDR Trigger: TCTGTCTGACCGCCAAGGCCAGGCAGCCCTCCAGCT...AGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTTCCTCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR TCA 90 bp | CAGGCACAGATGGGTCAGCTTCCTTCTACTCCACCCTTGCTCTCCTGGGTGGGGGGTGTTTGCTGGCTGTaGCCACCGGCAGGGTGTTTG | + |
Preference number: 2 (lower is better) Translates to: QAQMGQLPSTPPLLSWVGGVCWL*PPAGCL Trigger: CAAACACCCTGCCGGTGGTCACAGCCAGCAAACACC...CCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTGCCTG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | CGAGAGGAAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTGCCCCACACTCGGCAGGGTGTTTGCTaGCTCCACCCCAGCTTTCTC | + |
Preference number: 2 (lower is better) Translates to: REEEFAVGAQSGCQVPHTRQGVC*LHPSFL Trigger: GAGAAAGCTGGGGTGGAGCCAGCAAACACCCTGCCG...AGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTTCCTCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTCTCCTTCCAGTGGGCTaGAGGGTGGCAGGCCTAAGA | + |
Preference number: 2 (lower is better) Translates to: GGREQGKGELILTSPHTRLLPVG*RVAGLR Trigger: TCTTAGGCCTGCCACCCTCCAGCCCACTGGAAGGAG...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | AGCTGGCTTGAGTGTGTATGCTGGGGCGCTGGGCAGCTCAGAGGAGTGAAAAGCGGTCTGCAGGGCAGCTaGGGAGAAGGGCAGTTCAGC | + |
Preference number: 2 (lower is better) Translates to: SWLECVCWGAGQLRGVKSGLQGS*GEGQFS Trigger: GCTGAACTGCCCTTCTCCCCAGCTGCCCTGCAGACC...GCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 90 bp | ATACGGGTTCAGTGGGCTGGTCGCAGAGAGCTGTCTGCTGAAGCCTaGATGTGCTTCAGGGCCAGGAGAGAGCGTGAGAGGGCTGACTGG | + |
Preference number: 2 (lower is better) Translates to: IRVQWAGRRELSAEA*MCFRARRERERADW Trigger: CCAGTCAGCCCTCTCACGCTCTCTCCTGGCCCTGAAGCACATCAAGGCTTCAGCAGACAGCTCTCTGCGACCAGCCCACTGAACCCGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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3UTR-3UTR CCA 90 bp | GCAGAGGCGTTGGCCACAGACGGCTGCGGGTGGCACTTGAGGGACGAGGAGAGTGAGAGGCCTGTGTTCTaGCCATTATGTGGGAAAGCA | + |
Preference number: 2 (lower is better) Translates to: AEALATDGCGWHLRDEESERPVF*PLCGKA Trigger: TGCTTTCCCACATAATGGCCAGAACACAGGCCTCTC...ACTCTCCTCGTCCCTCAAGTGCCACCCGCAGCCGTCTGTGGCCAACGCCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR-3UTR TCA 90 bp | TGCTCTGAGGTCACCATCTGGGAGGCAGGATACGGGTTCAGTGGGCTGGTCGCATGTCTGCTGAAGCCTTaGTGTGCTTCAGGGCCAGGA | + |
Preference number: 2 (lower is better) Translates to: CSEVTIWEAGYGFSGLVACLLKP*CASGPG Trigger: TCCTGGCCCTGAAGCACATCAAGGCTTCAGCAGACA...TGCGACCAGCCCACTGAACCCGTATCCTGCCTCCCAGATGGTGACCTCAGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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3UTR-3UTR GCA 90 bp | GCCAGGTGCCCCACACTCCTGGGGCTTGGTGTGATCAGCCATGCTGGATGCACTTCTGTGAGGGAAAGGTaGGCATACAGGAAGCAGCAG | + |
Preference number: 2 (lower is better) Translates to: ARCPTLLGLGVISHAGCTSVRER*AYRKQQ Trigger: CTGCTGCTTCCTGTATGCGCACCTTTCCCTCACAGA...AGTGCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR GCA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTTCCTGGAACTCACTCTaGAGACCAGGCTGGCCTCAA | + |
Preference number: 2 (lower is better) Translates to: GGREQGKGELILTSPHTRSWNSL*RPGWPQ Trigger: TTGAGGCCAGCCTGGTCTGCAGAGTGAGTTCCAGGA...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | TGTCACCTCACACCTGCCTCTTCCCCGGTGTGTGGGCGTCACCGACACGATGATGTACAACTGGTGCCATaGGCCGAAGAGTGCAGCTGT | + |
Preference number: 2 (lower is better) Translates to: CHLTPASSPVCGRHRHDDVQLVP*AEECSC Trigger: ACAGCTGCACTCTTCGGCCCATGGCACCAGTTGTAC...ATCATCGTGTCGGTGACGCCCACACACCGGGGAAGAGGCAGGTGTGAGGTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | CCTCTCCTCCTGTCTGTGAGGGAAAGGTGCGCATACAGGAAGCAGCAGCAAAGAAGAATACCCGCCAGCTaGAGGGCTGCCTGGCCTTGG | + |
Preference number: 2 (lower is better) Translates to: PLLLSVRERCAYRKQQQRRIPAS*RAAWPW Trigger: CCAAGGCCAGGCAGCCCTCCAGCTGGCGGGTATTCT...TCTTTGCTGCTGCTTCCTGTATGCGCACCTTTCCCTCACAGACAGGAGGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | CAGCAGCTCCTTCCAGTGGGCTGGAGGGTGGCAGGCCTAAGAGGGAGGGCATCTCTGCCCTGGGACGGCTaGGTAAGCTTCTTCATTTTA | + |
Preference number: 2 (lower is better) Translates to: QQLLPVGWRVAGLRGRASLPWDG*VSFFIL Trigger: TAAAATGAAGAAGCTTACCCAGCCGTCCCAGGGCAG...AGATGCCCTCCCTCTTAGGCCTGCCACCCTCCAGCCCACTGGAAGGAGCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | GCCAGGTGCCCCACACTCCTGGGGCTTGGTGTGATCAGCCATGCTGGATGCACTCTACCAGGCACTTGGTaGGCACTAGGGGTCAATACA | + |
Preference number: 2 (lower is better) Translates to: ARCPTLLGLGVISHAGCTLPGTW*ALGVNT Trigger: TGTATTGACCCCTAGTGCCCACCAAGTGCCTGGTAG...AGTGCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTACCAGGCCAGTGGCATaGTCAGGGGAAGAGGATTCT | + |
Preference number: 2 (lower is better) Translates to: GGREQGKGELILTSPHTRTRPVA*SGEEDS Trigger: AGAATCCTCTTCCCCTGACCATGCCACTGGCCTGGT...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR TCA 90 bp | CAGGCACAGATGGGTCAGCTTCCTTCTACTCCACCCTTGCTCTCCTGGGTGGGGTGTCCACCTAGCTGCTaGGGGACATATTCCCTAGGA | + |
Preference number: 2 (lower is better) Translates to: QAQMGQLPSTPPLLSWVGCPPSC*GTYSLG Trigger: TCCTAGGGAATATGTCCCTCAGCAGCTAGGTGGACA...CCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | AGCTGGCTTGAGTGTGTATGCTGGGGCGCTGGGCAGCTCAGAGGAGTGAAAAGCCACCCCAGCTTTCTCTaGCCATTTCAGTTCCCCAGT | + |
Preference number: 2 (lower is better) Translates to: SWLECVCWGAGQLRGVKSHPSFL*PFQFPS Trigger: ACTGGGGAACTGAAATGGCCAGAGAAAGCTGGGGTG...GCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR TCA 90 bp | AAAGTGGGCTCTGCTCTGAGGTCACCATCTGGGAGGCAGGATACGGGTTCAGTGCAGAGAGCTGTCTGCTaGAGCCTTGATGTGCTTCAG | + |
Preference number: 2 (lower is better) Translates to: KVGSALRSPSGRQDTGSVQRAVC*SLDVLQ Trigger: CTGAAGCACATCAAGGCTTCAGCAGACAGCTCTCTG...CACTGAACCCGTATCCTGCCTCCCAGATGGTGACCTCAGAGCAGAGCCCACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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3UTR-3UTR CCA 90 bp | AGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGTGCTAAAACCCACCACCCTGCTCCTCCCTTGTGCTaGGTGGACATCACTTTCCTC | + |
Preference number: 2 (lower is better) Translates to: RRAHPHFSPHSCAKTHHPAPPLC*VDITFL Trigger: GAGGAAAGTGATGTCCACCCAGCACAAGGGAGGAGC...AGGGTGGTGGGTTTTAGCACACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR TCA 90 bp | AGCTGGCTTGAGTGTGTATGCTGGGGCGCTGGGCAGCTCAGAGGAGTGAAAAGCTTCCATCTTCAGTGCTaGTGGGAATCTGAGGTTTGG | + |
Preference number: 2 (lower is better) Translates to: SWLECVCWGAGQLRGVKSFHLQC*WESEVW Trigger: CCAAACCTCAGATTCCCATCAGCACTGAAGATGGAA...GCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR GCA 90 bp | CAGGCACAGATGGGTCAGCTTCCTTCTACTCCACCCTTGCTCTCCTGGGTGGGGACTCAGAAATCATACTaGCTCTGTCTCCCAAGTGCT | + |
Preference number: 2 (lower is better) Translates to: QAQMGQLPSTPPLLSWVGTQKSY*LCLPSA Trigger: AGCACTTGGGAGACAGAGGCAGTATGATTTCTGAGT...CCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR GCA 90 bp | CCTGCAGCCAGCGCTTTCCCATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGGGTGCTGGTAGAATCTaGTCAGATTACTTACTGTGT | + |
Preference number: 2 (lower is better) Translates to: PAASAFPLAGESLRNRAAGAGRI*SDYLLC Trigger: ACACAGTAAGTAATCTGAGCAGATTCTACCAGCACC...CGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAATGGGAAAGCGCTGGCTGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | AGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGTGCTAAAACCCACCACCCTTGTCTAGCAAAGCCTTaGCTGAGCTCAGTGGAGAGC | + |
Preference number: 2 (lower is better) Translates to: RRAHPHFSPHSCAKTHHPCLAKP*LSSVES Trigger: GCTCTCCACTGAGCTCAGCCAAGGCTTTGCTAGACA...AGGGTGGTGGGTTTTAGCACACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGTGTGGGGGCCCAGTCTaGATGCCAGGTGCCCCACAC | + |
Preference number: 2 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTCGGPV*MPGAPH Trigger: GTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACA...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | GTTGGCCACAGACGGCTGCGGGTGGCACTTGAGGGACGAGGAGAGTGCCATCTTTTACTTCGAGAACTTTaGAGACCAGAGGAGGTTCTT | + |
Preference number: 2 (lower is better) Translates to: VGHRRLRVALEGRGECHLLLREL*RPEEVL Trigger: AAGAACCTCCTCTGGTCTCCAAAGTTCTCGAAGTAA...AAGATGGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGCCGTCTGTGGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR-3UTR TCA 90 bp | CCTGCAGCCAGCGCTTTCCCATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGCTTCTTCATTTTAAGTaGGCCATTGGACAGAGTGAT | + |
Preference number: 2 (lower is better) Translates to: PAASAFPLAGESLRNRAALLHFK*AIGQSD Trigger: ATCACTCTGTCCAATGGCTCACTTAAAATGAAGAAG...CGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAATGGGAAAGCGCTGGCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR TCA 90 bp | CAGGCACAGATGGGTCAGCTTCCTTCTACTCCACCCTTGCTCTCCTGGGTGGGGAATAAAAGAGTCCCATaGACCAGGCCTTCTTTCTTT | + |
Preference number: 2 (lower is better) Translates to: QAQMGQLPSTPPLLSWVGNKRVP*TRPSFF Trigger: AAAGAAAGAAGGCCTGGTTCATGGGACTCTTTTATT...CCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR GCA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGCACCGGCAGGGTGTTTaGTGGCTCCACCCCAGCTTT | + |
Preference number: 2 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTHRQGV*WLHPSF Trigger: AAAGCTGGGGTGGAGCCAGCAAACACCCTGCCGGTG...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 90 bp | CATCTTACTGAGTGTGGCTTGGATGGAAGGGTTACTTCGAGAACTTaGGAGACCAGAGGAGGTTCTTATCCCCAGGTGAGTCATGGCAGC | + |
Preference number: 2 (lower is better) Translates to: HLTECGLDGRVTSRT*ETRGGSYPQVSHGS Trigger: GCTGCCATGACTCACCTGGGGATAAGAACCTCCTCTGGTCTCCAAAGTTCTCGAAGTAACCCTTCCATCCAAGCCACACTCAGTAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR-3UTR GCA 90 bp | ATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGTAGGGTATGGGGTGAGATCTCAGTCTAGTGGGCATTaGATTAAACTTGAGGTCTGC | + |
Preference number: 2 (lower is better) Translates to: IGWRKPQEQGSVGYGVRSQSSGH*IKLEVC Trigger: GCAGACCTCAAGTTTAATGCAATGCCCACTAGACTG...AGATCTCACCCCATACCCTACGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR TCA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGGGTGTTTGCTGGCTGTaGCCACTGTCAGGGTGTTTG | + |
Preference number: 2 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTGVCWL*PLSGCL Trigger: CAAACACCCTGACAGTGGTCACAGCCAGCAAACACC...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR TCA 90 bp | ATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGTAGGGTATGGGGTGAGATCTTCTACATTTACACACTaGCTGACTGGATGGCCAATA | + |
Preference number: 2 (lower is better) Translates to: IGWRKPQEQGSVGYGVRSSTFTH*LTGWPI Trigger: TATTGGCCATCCAGTCAGTCAGTGTGTAAATGTAGA...AGATCTCACCCCATACCCTACGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CCA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGCGCTTTCCCATTGGCTaGAGAAAGCCTCAGGAACAG | + |
Preference number: 2 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTRFPIG*RKPQEQ Trigger: CTGTTCCTGAGGCTTTCTCCAGCCAATGGGAAAGCG...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 90 bp | TATAAAACTTGGAAGCTACTTTATACAAAGTCCGATCTTTCAATATaGCTTAACAAAAGGCCGGGAGTTAGGACACTGGCCGGAAGTCTG | + |
Preference number: 2 (lower is better) Translates to: YKTWKLLYTKSDLSI*LNKRPGVRTLAGSL Trigger: CAGACTTCCGGCCAGTGTCCTAACTCCCGGCCTTTTGTTAAGCAATATTGAAAGATCGGACTTTGTATAAAGTAGCTTCCAAGTTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 72 bp | CTGGGGCACGTGGCCGCACAGCTCCACCCGGCTGTCTaGAGAGCCGCGGTGTGGGGAGCTGGAGCAGCCTCT | + |
Preference number: 3 (lower is better) Translates to: LGHVAAQLHPAV*RAAVWGAGAAS Trigger: AGAGGCTGCTCCAGCTCCCCACACCGCGGCTCTTCAGACAGCCGGGTGGAGCTGTGCGGCCACGTGCCCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 72 bp | GAGGGGTGCAGAGCAGAGGCGTTGGCCACAGACGGCTaGGGGTGGCACTTGAGGGACGAGGAGAGTGCCATC | + |
Preference number: 3 (lower is better) Translates to: EGCRAEALATDG*GWHLRDEESAI Trigger: GATGGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGCCGTCTGTGGCCAACGCCTCTGCTCTGCACCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR-3UTR CAA 90 bp | GCCAGGTGCCCCACACTCCTGGGGCTTGGTGTGATCAGCCATGCTGGATGCACTGAGGGCTGCCTGGCCTaGGCGGTCAGACAGAAAGGC | + |
Preference number: 3 (lower is better) Translates to: ARCPTLLGLGVISHAGCTEGCLA*AVRQKG Trigger: GCCTTTCTGTCTGACCGCCAAGGCCAGGCAGCCCTC...AGTGCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 72 bp | GCTGGCTGTGACCACTGTCAGGGTGTTTGCTGGCTGTaGCCACCGGCAGGGTGTTTGCTGGCTCCACCCCAG | + |
Preference number: 3 (lower is better) Translates to: AGCDHCQGVCWL*PPAGCLLAPPQ Trigger: CTGGGGTGGAGCCAGCAAACACCCTGCCGGTGGTCACAGCCAGCAAACACCCTGACAGTGGTCACAGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 72 bp | ATGGGCCGAAGAGTGCAGCTGTGTCTAGCAAAGCCTTaGCTGAGCTCAGTGGAGAGCCCGGGGCAGCGGCTC | + |
Preference number: 3 (lower is better) Translates to: MGRRVQLCLAKP*LSSVESPGQRL Trigger: GAGCCGCTGCCCCGGGCTCTCCACTGAGCTCAGCCAAGGCTTTGCTAGACACAGCTGCACTCTTCGGCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CAA 90 bp | CGAGAGGAAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTGCCCCACACTCCACCGGCAGGGTGTTaGCTGGCTCCACCCCAGCTT | + |
Preference number: 3 (lower is better) Translates to: REEEFAVGAQSGCQVPHTPPAGC*LAPPQL Trigger: AAGCTGGGGTGGAGCCAGCAAACACCCTGCCGGTGG...AGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTTCCTCTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CAA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTACCCCGGCTCCTCCCTaGTGCTGGGTGGACATCACT | + |
Preference number: 3 (lower is better) Translates to: GGREQGKGELILTSPHTRTPAPP*CWVDIT Trigger: AGTGATGTCCACCCAGCACAAGGGAGGAGCCGGGGT...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 72 bp | GGTCTGCAGGGCAGCTGGGGAGAAGGGCAGTTCAGCTaGCCTGCACTAATACGAGTCCCAGCAGCTCCTTCC | + |
Preference number: 3 (lower is better) Translates to: GLQGSWGEGQFS*PALIRVPAAPS Trigger: GGAAGGAGCTGCTGGGACTCGTATTAGTGCAGGGCAGCTGAACTGCCCTTCTCCCCAGCTGCCCTGCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 72 bp | CCCCACCACGAGGCACAGTCCCTCTCTCCTCCATCCTaGGTACATGCACTCCTACCAGGCACTTGGTGGGCA | + |
Preference number: 3 (lower is better) Translates to: PHHEAQSLSPPS*VHALLPGTWWA Trigger: TGCCCACCAAGTGCCTGGTAGGAGTGCATGTACCCAGGATGGAGGAGAGAGGGACTGTGCCTCGTGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 72 bp | AGGCACAGATGGGTCAGCTTCCTTCTACTCCACCCTTaGTCTCCTGGGTGGGGACAGCCACTGAGCCTCAGC | + |
Preference number: 3 (lower is better) Translates to: RHRWVSFLLLHP*SPGWGQPLSLS Trigger: GCTGAGGCTCAGTGGCTGTCCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 72 bp | CCTGAAGACGGACACGGGAGCTGGCTTGAGTGTGTATaGTGGGGCGCTGGGCAGCTCAGAGGAGTGAAAAGC | + |
Preference number: 3 (lower is better) Translates to: PEDGHGSWLECV*WGAGQLRGVKS Trigger: GCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCTCCCGTGTCCGTCTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 72 bp | CAGCTGGAAGGTTGCCCACGCTGTTCCCCACACTCATaGTACCAAAGAGGTGGTCGCTGGTGTCCAGGGAGG | + |
Preference number: 3 (lower is better) Translates to: QLEGCPRCSPHS*YQRGGRWCPGR Trigger: CCTCCCTGGACACCAGCGACCACCTCTTTGGTAGCATGAGTGTGGGGAACAGCGTGGGCAACCTTCCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR CCA 72 bp | ATGGGTCAGCTTCCTTCTACTCCACCCTTGCTCTCCTaGGTGGGGACAGCCACTGAGCCTCAGCTTCAGCCC | + |
Preference number: 3 (lower is better) Translates to: MGQLPSTPPLLS*VGTATEPQLQP Trigger: GGGCTGAAGCTGAGGCTCAGTGGCTGTCCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 72 bp | TGGATGCCAGGTGCCCCACACTCCTGGGGCTTGGTGTaGTCAGCCATGCTGGATGCACTGGATGATGTCCAC | + |
Preference number: 3 (lower is better) Translates to: WMPGAPHSWGLV*SAMLDALDDVH Trigger: GTGGACATCATCCAGTGCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGCATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 72 bp | ACAAAAGGCCGGGAGTTAGGACACTGGCCGGAAGTCTaGCTAGCTGCTGGGATGGCCCCGTTCTGGAGCAGT | + |
Preference number: 3 (lower is better) Translates to: TKGRELGHWPEV*LAAGMAPFWSS Trigger: ACTGCTCCAGAACGGGGCCATCCCAGCAGCTAGTCAGACTTCCGGCCAGTGTCCTAACTCCCGGCCTTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 72 bp | AGCGTCTGTGGGCAGGAAGGAAAGTGGGCTCTGCTCTaGGGTCACCATCTGGGAGGCAGGATACGGGTTCAG | + |
Preference number: 3 (lower is better) Translates to: SVCGQEGKWALL*GHHLGGRIRVQ Trigger: CTGAACCCGTATCCTGCCTCCCAGATGGTGACCTCAGAGCAGAGCCCACTTTCCTTCCTGCCCACAGACGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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3UTR GCA 72 bp | AAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTaGCCCACACTCCTGGGGCTTGGTGTGATCAGCCAT | + |
Preference number: 3 (lower is better) Translates to: KNLLWGPSLDAR*PTLLGLGVISH Trigger: ATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 72 bp | ATCTCCCGTTACGCCTTCACCAGAGGACAGCAGCTGTaGAAGCAGGGATTCTCCTTCAGGGTCCTCCCCCTC | + |
Preference number: 3 (lower is better) Translates to: ISRYAFTRGQQL*KQGFSFRVLPL Trigger: GAGGGGGAGGACCCTGAAGGAGAATCCCTGCTTGCACAGCTGCTGTCCTCTGGTGAAGGCGTAACGGGAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 72 bp | CGGCAGGGTGTTTGCTGGCTCCACCCCAGCTTTCTCTaGCCATTTCAGTTCCCCAGTTCCACTGCACTGTGC | + |
Preference number: 3 (lower is better) Translates to: RQGVCWLHPSFL*PFQFPSSTALC Trigger: GCACAGTGCAGTGGAACTGGGGAACTGAAATGGCCAGAGAAAGCTGGGGTGGAGCCAGCAAACACCCTGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 72 bp | GGAAGCTCCAAAGCAGCTGGCCTGCAGCAGTACAACTaGTGCCATGGGCCGAAGAGTGCAGCTGTGTCTAGC | + |
Preference number: 3 (lower is better) Translates to: GSSKAAGLQQYN*CHGPKSAAVSS Trigger: GCTAGACACAGCTGCACTCTTCGGCCCATGGCACCAGTTGTACTGCTGCAGGCCAGCTGCTTTGGAGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
||
3UTR CCA 72 bp | GAAGACGGACACGGGAGCTGGCTTGAGTGTGTATGCTaGGGCGCTGGGCAGCTCAGAGGAGTGAAAAGCTTC | + |
Preference number: 3 (lower is better) Translates to: EDGHGSWLECVC*GAGQLRGVKSF Trigger: GAAGCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCTCCCGTGTCCGTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
||
3UTR CCA 72 bp | GGAGACCAGAGGAGGTTCTTATCCCCAGGTGAGTCATaGCAGCTGGAAGGTTGCCCACGCTGTTCCCCACAC | + |
Preference number: 3 (lower is better) Translates to: GDQRRFLSPGES*QLEGCPRCSPH Trigger: GTGTGGGGAACAGCGTGGGCAACCTTCCAGCTGCCATGACTCACCTGGGGATAAGAACCTCCTCTGGTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
||
3UTR-3UTR CAA 90 bp | CACTCATGCTACCAAAGAGGTGGTCGCTGGTGTCCAGGGAGGCTGGCAGGGGTGTTATGTGGGAAAGCATaGCCGCCCCCAACATCACAG | + |
Preference number: 3 (lower is better) Translates to: HSCYQRGGRWCPGRLAGVLCGKA*PPPTSQ Trigger: CTGTGATGTTGGGGGCGGCAATGCTTTCCCACATAA...CACCCCTGCCAGCCTCCCTGGACACCAGCGACCACCTCTTTGGTAGCATGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
||
3UTR TCA 72 bp | GGTGGCAGGCCTAAGAGGGAGGGCATCTTGTGCAGGTaGCACACCTGTAGCCTCCCTTTCCTCCTCCATTCT | + |
Preference number: 3 (lower is better) Translates to: GGRPKREGILCR*HTCSLPFLLHS Trigger: AGAATGGAGGAGGAAAGGGAGGCTACAGGTGTGTCACCTGCACAAGATGCCCTCCCTCTTAGGCCTGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
||
3UTR GCA 72 bp | AGACGGCTGCGGGTGGCACTTGAGGGACGAGGAGAGTaGCATCTTACTGAGTGTGGCTTGGATGGAAGGGTT | + |
Preference number: 3 (lower is better) Translates to: RRLRVALEGRGE*HLTECGLDGRV Trigger: AACCCTTCCATCCAAGCCACACTCAGTAAGATGGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGCCGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR CCA 72 bp | GTGTTTGCTGGCTGTGACCACCGGCAGGGTGTTTGCTaGCTCCACCCCAGCTTTCTCTGGCCATTTCAGTTC | + |
Preference number: 3 (lower is better) Translates to: VFAGCDHRQGVC*LHPSFLWPFQF Trigger: GAACTGAAATGGCCAGAGAAAGCTGGGGTGGAGCCAGCAAACACCCTGCCGGTGGTCACAGCCAGCAAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 72 bp | CTGGAGAAAGCCTCAGGAACAGGGCAGCGTAGGGTATaGGGTGAGATCTCCCGTTACGCCTTCACCAGAGGA | + |
Preference number: 3 (lower is better) Translates to: LEKASGTGQRRV*GEISRYAFTRG Trigger: TCCTCTGGTGAAGGCGTAACGGGAGATCTCACCCCATACCCTACGCTGCCCTGTTCCTGAGGCTTTCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 72 bp | CCAACATCACAGGATCGAGGGCGCCCAGACAGGGACTaGATCTCCTTGCTCTCCCACAGGTGTTTAGGCAGT | + |
Preference number: 3 (lower is better) Translates to: PTSQDRGRPDRD*ISLLSHRCLGS Trigger: ACTGCCTAAACACCTGTGGGAGAGCAAGGAGATCCAGTCCCTGTCTGGGCGCCCTCGATCCTGTGATGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR CCA 72 bp | TTCAGGGTGCCCAGGAACGGTGAGAGGCCTGTGTTCTaGCCATTATGTGGGAAAGCATTGCCGCCCCCAACA | + |
Preference number: 3 (lower is better) Translates to: FRVPRNGERPVF*PLCGKALPPPT Trigger: TGTTGGGGGCGGCAATGCTTTCCCACATAATGGCCAGAACACAGGCCTCTCACCGTTCCTGGGCACCCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR CCA 72 bp | TTTAGTTTCCAATTAAACAGCAGAGACTGGGGCACGTaGCCGCACAGCTCCACCCGGCTGTCTGAAGAGCCG | + |
Preference number: 3 (lower is better) Translates to: FSFQLNSRDWGT*PHSSTRLSEEP Trigger: CGGCTCTTCAGACAGCCGGGTGGAGCTGTGCGGCCACGTGCCCCAGTCTCTGCTGTTTAATTGGAAACTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
||
3UTR CCA 72 bp | AGAGGAGGTTCTTATCCCCAGGTGAGTCATGGCAGCTaGAAGGTTGCCCACGCTGTTCCCCACACTCATGCT | + |
Preference number: 3 (lower is better) Translates to: RGGSYPQVSHGS*KVAHAVPHTHA Trigger: AGCATGAGTGTGGGGAACAGCGTGGGCAACCTTCCAGCTGCCATGACTCACCTGGGGATAAGAACCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR-3UTR CAA 90 bp | CAGCTGGAAGGTTGCCCACGCTGTTCCCCACACTCATGCTACCAAAGAGGTGGTAGGGACTGGATCTCCTaGCTCTCCCACAGGTGTTTA | + |
Preference number: 3 (lower is better) Translates to: QLEGCPRCSPHSCYQRGGRDWIS*LSHRCL Trigger: TAAACACCTGTGGGAGAGCAAGGAGATCCAGTCCCT...ACCACCTCTTTGGTAGCATGAGTGTGGGGAACAGCGTGGGCAACCTTCCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
||
3UTR TCA 72 bp | CTATGCTGTAACCACCGTCAAGGTGTTTGCTGGCTGTaGCCACTGTCAGGGTGTTTGCTGGCTGTGACCACC | + |
Preference number: 3 (lower is better) Translates to: LCCNHRQGVCWL*PLSGCLLAVTT Trigger: GGTGGTCACAGCCAGCAAACACCCTGACAGTGGTCACAGCCAGCAAACACCTTGACGGTGGTTACAGCATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CAA 90 bp | GTGGCTTGGATGGAAGGGTTACTTCGAGAACTTTGGAGACCAGAGGAGGTTCTTATGGCAGCTGGAAGGTaGCCCACGCTGTTCCCCACA | + |
Preference number: 3 (lower is better) Translates to: VAWMEGLLRELWRPEEVLMAAGR*PTLFPT Trigger: TGTGGGGAACAGCGTGGGCAACCTTCCAGCTGCCAT...AAGAACCTCCTCTGGTCTCCAAAGTTCTCGAAGTAACCCTTCCATCCAAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
||
3UTR TCA 72 bp | GCCCTGGGACGGCTGGGTAAGCTTCTTCATTTTAAGTaGGCCATTGGACAGAGTGATGGCTGGGCCCAGAAT | + |
Preference number: 3 (lower is better) Translates to: ALGRLGKLLHFK*AIGQSDGWAQN Trigger: ATTCTGGGCCCAGCCATCACTCTGTCCAATGGCTCACTTAAAATGAAGAAGCTTACCCAGCCGTCCCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
||
3UTR TCA 72 bp | TCAGTGAGCAAACAGGTCTCCCTCTCCTCCTGTCTGTaGGGGAAAGGTGCGCATACAGGAAGCAGCAGCAAA | + |
Preference number: 3 (lower is better) Translates to: SVSKQVSLSSCL*GKGAHTGSSSK Trigger: TTTGCTGCTGCTTCCTGTATGCGCACCTTTCCCTCACAGACAGGAGGAGAGGGAGACCTGTTTGCTCACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
||
3UTR TCA 72 bp | AGTGTGTATGCTGGGGCGCTGGGCAGCTCAGAGGAGTaGAAAGCTTCCACTTTAACTAAAGTCACCCCGGGT | + |
Preference number: 3 (lower is better) Translates to: SVYAGALGSSEE*KASTLTKVTPG Trigger: ACCCGGGGTGACTTTAGTTAAAGTGGAAGCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
||
3UTR GCA 72 bp | CCCCTTCCTCTCAACTTTTACATCAGCATCGATCTCTaGCTGAAGACGGACACGGGAGCTGGCTTGAGTGTG | + |
Preference number: 3 (lower is better) Translates to: PLPLNFYISIDL*LKTDTGAGLSV Trigger: CACACTCAAGCCAGCTCCCGTGTCCGTCTTCAGGCAGAGATCGATGCTGATGTAAAAGTTGAGAGGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 72 bp | CTGACTAGCTGCTGGGATGGCCCCGTTCTGGAGCAGTaGGAACACTGGGAACCATCTGTGCATAAATCAGAA | + |
Preference number: 3 (lower is better) Translates to: LTSCWDGPVLEQ*EHWEPSVHKSE Trigger: TTCTGATTTATGCACAGATGGTTCCCAGTGTTCCCACTGCTCCAGAACGGGGCCATCCCAGCAGCTAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CAA 90 bp | AGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGTGCTAAAACCCACCACCCTCAAACTGCCTTCAGTTaGCCTAACTTAAGCCTGCCC | + |
Preference number: 3 (lower is better) Translates to: RRAHPHFSPHSCAKTHHPQTAFS*PNLSLP Trigger: GGGCAGGCTTAAGTTAGGCAAACTGAAGGCAGTTTG...AGGGTGGTGGGTTTTAGCACACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 72 bp | CCTAGTGTTAAGGCACACTCAAGTGAGTCTGAAAGGTaGAGCTCTGAGCTAAGGCAGGGGACAGAGAGAGCT | + |
Preference number: 3 (lower is better) Translates to: PSVKAHSSESER*SSELRQGTERA Trigger: AGCTCTCTCTGTCCCCTGCCTTAGCTCAGAGCTTCACCTTTCAGACTCACTTGAGTGTGCCTTAACACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 72 bp | ACAGGTCTCCCTCTCCTCCTGTCTGTGAGGGAAAGGTaGGCATACAGGAAGCAGCAGCAAAGAGATCATAAA | + |
Preference number: 3 (lower is better) Translates to: TGLPLLLSVRER*AYRKQQQRDHK Trigger: TTTATGATCTCTTTGCTGCTGCTTCCTGTATGCGCACCTTTCCCTCACAGACAGGAGGAGAGGGAGACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 72 bp | CCACGGATCAGGCTCAACGCAGAGAGCAGATTGTGCTaGAAACCCCTTCCTCTCAACTTTTACATCAGCATC | + |
Preference number: 3 (lower is better) Translates to: PRIRLNAESRLC*KPLPLNFYISI Trigger: GATGCTGATGTAAAAGTTGAGAGGAAGGGGTTTCCAGCACAATCTGCTCTCTGCGTTGAGCCTGATCCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR-3UTR CAA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGGGTGCTCTGGTACCGTaGTGTGACACTGAGCCAACT | + |
Preference number: 3 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTGALVP*CDTEPT Trigger: AGTTGGCTCAGTGTCACACAACGGTACCAGAGCACC...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
||
3UTR CCA 72 bp | CAAACTGCCTTCAGTTTGCCTAACTTAAGCCTGCCCTaGGACGGCTGGGTAAGCTTCTTCATTTTAAGTGAG | + |
Preference number: 3 (lower is better) Translates to: QTAFSLPNLSLP*DGWVSFFILSE Trigger: CTCACTTAAAATGAAGAAGCTTACCCAGCCGTCCCAGGGCAGGCTTAAGTTAGGCAAACTGAAGGCAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 72 bp | ACCGGTAGGCTCTCTAGTGGCTTAAAGCTACACACATaGAAAGATCAGGCTGATAGGCCTATGGGCAGATTT | + |
Preference number: 3 (lower is better) Translates to: TGRLSSGLKLHT*KDQADRPMGRF Trigger: AAATCTGCCCATAGGCCTATCAGCCTGATCTTTTCATGTGTGTAGCTTTAAGCCACTAGAGAGCCTACCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 72 bp | CCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATaGATACACGACCTCTCGGCCCAGAGAATATACAGT | + |
Preference number: 3 (lower is better) Translates to: PNRKCLQICARA*IHDLSAQRIYS Trigger: ACTGTATATTCTCTGGGCCGAGAGGTCGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR GCA 72 bp | GGAAGCTACTTTATACAAAGTCCGATCTTTCAATATTaGTTAACAAAAGGCCGGGAGTTAGGACACTGGCCG | + |
Preference number: 3 (lower is better) Translates to: GSYFIQSPIFQY*LTKGRELGHWP Trigger: CGGCCAGTGTCCTAACTCCCGGCCTTTTGTTAAGCAATATTGAAAGATCGGACTTTGTATAAAGTAGCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR TCA 72 bp | CTGACGTGTTACACAGCATTTTCTACATTTACACACTaGCTGACTGGATGGCCAATAAAGAGAATTAAGGGT | + |
Preference number: 3 (lower is better) Translates to: LTCYTAFSTFTH*LTGWPIKRIKG Trigger: ACCCTTAATTCTCTTTATTGGCCATCCAGTCAGTCAGTGTGTAAATGTAGAAAATGCTGTGTAACACGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CCA 72 bp | AGCTACACACATGAAAAGATCAGGCTGATAGGCCTATaGGCAGATTTAATTCAGTGCTACATTGTCTCTTTT | + |
Preference number: 3 (lower is better) Translates to: SYTHEKIRLIGL*ADLIQCYIVSF Trigger: AAAAGAGACAATGTAGCACTGAATTAAATCTGCCCATAGGCCTATCAGCCTGATCTTTTCATGTGTGTAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | CAGCAGCTCCTTCCAGTGGGCTGGAGGGTGGCAGGCCTAAGAGGGAGGGCATCTGGGCTGACTGGAGGCTaGCTGCGCCGAGAGGGGCCA | + |
Preference number: 4 (lower is better) Translates to: QQLLPVGWRVAGLRGRASGLTGG*LRREGP Trigger: TGGCCCCTCTCGGCGCAGGCAGCCTCCAGTCAGCCC...AGATGCCCTCCCTCTTAGGCCTGCCACCCTCCAGCCCACTGGAAGGAGCTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | CAGCAGCTCCTTCCAGTGGGCTGGAGGGTGGCAGGCCTAAGAGGGAGGGCATCTTCCTCGGCCTGCCGCTaGGTGTGCAGGGCGATCTTC | + |
Preference number: 4 (lower is better) Translates to: QQLLPVGWRVAGLRGRASSSACR*VCRAIF Trigger: GAAGATCGCCCTGCACACGCAGCGGCAGGCCGAGGA...AGATGCCCTCCCTCTTAGGCCTGCCACCCTCCAGCCCACTGGAAGGAGCTGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | GCCTTGATGTGCTTCAGGGCCAGGAGAGAGCGTGAGAGGGCTGACTGGAGGCTGAGCCGGAGGGAGGGGTaGAGAGCAGAGGCGTTGGCC | + |
Preference number: 4 (lower is better) Translates to: ALMCFRARRERERADWRLSRREG*RAEALA Trigger: GGCCAACGCCTCTGCTCTGCACCCCTCCCTCCGGCT...CAGCCTCCAGTCAGCCCTCTCACGCTCTCTCCTGGCCCTGAAGCACATCAAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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CDS-3UTR GCA 90 bp | CAGCAGCTCCTTCCAGTGGGCTGGAGGGTGGCAGGCCTAAGAGGGAGGGCATCTCTCCGGTGTTCAGGGTaGCCAGGAACGGTGAGAGGC | + |
Preference number: 4 (lower is better) Translates to: QQLLPVGWRVAGLRGRASLRCSG*PGTVRG Trigger: GCCTCTCACCGTTCCTGGGCACCCTGAACACCGGAG...AGATGCCCTCCCTCTTAGGCCTGCCACCCTCCAGCCCACTGGAAGGAGCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | AGGGTGGCAGGCCTAAGAGGGAGGGCATCTTGTGCAGGTGACACACCTGTAGCCAGCCGGAGGGAGGGGTaGAGAGCAGAGGCGTTGGCC | + |
Preference number: 4 (lower is better) Translates to: RVAGLRGRASCAGDTPVASRREG*RAEALA Trigger: GGCCAACGCCTCTGCTCTGCACCCCTCCCTCCGGCT...GGCTACAGGTGTGTCACCTGCACAAGATGCCCTCCCTCTTAGGCCTGCCACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 72 bp | CATGGGCCGAAGAGTGCAGCTGTGTCTAGCAAAGCCTaGGCTGAGCTCAGTGGAGAGCCCGGGGCAGCGGCT | + |
Preference number: 4 (lower is better) Translates to: HGPKSAAVSSKA*AELSGEPGAAA Trigger: AGCCGCTGCCCCGGGCTCTCCACTGAGCTCAGCCAAGGCTTTGCTAGACACAGCTGCACTCTTCGGCCCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 72 bp | GCCCAGAATACCCGCCAGCTGGAGGGCTGCCTGGCCTaGGCGGTCAGACAGAAAGGCATCATGGTGCTCTGG | + |
Preference number: 4 (lower is better) Translates to: AQNTRQLEGCLA*AVRQKGIMVLW Trigger: CCAGAGCACCATGATGCCTTTCTGTCTGACCGCCAAGGCCAGGCAGCCCTCCAGCTGGCGGGTATTCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTTGGGGCAGGCCAGGCTaGCTGGCCTCCTCCTCCATA | + |
Preference number: 4 (lower is better) Translates to: GGREQGKGELILTSPHTRWGRPG*LASSSI Trigger: TATGGAGGAGGAGGCCAGTCAGCCTGGCCTGCCCCA...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | TGTCACCTCACACCTGCCTCTTCCCCGGTGTGTGGGCGTCACCGACACGATGATGGTGCCCAGGAACGGTaGGAGGCCTGTGTTCTGGCC | + |
Preference number: 4 (lower is better) Translates to: CHLTPASSPVCGRHRHDDGAQER*EACVLA Trigger: GGCCAGAACACAGGCCTCTCACCGTTCCTGGGCACC...ATCATCGTGTCGGTGACGCCCACACACCGGGGAAGAGGCAGGTGTGAGGTGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | GAGCGTCTGTGGGCAGGAAGGAAAGTGGGCTCTGCTCTGAGGTCACCATCTGGGGCTGCGGGTGGCACTTaGGGGACGAGGAGAGTGCCA | + |
Preference number: 4 (lower is better) Translates to: ERLWAGRKVGSALRSPSGAAGGT*GTRRVP Trigger: TGGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGC...CCCAGATGGTGACCTCAGAGCAGAGCCCACTTTCCTTCCTGCCCACAGACGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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CDS-3UTR GCA 90 bp | CCTGCAGCCAGCGCTTTCCCATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGAGGTCGGTCATGAGCTaGTCGAAGGCCCGCGTCTCC | + |
Preference number: 4 (lower is better) Translates to: PAASAFPLAGESLRNRAARSVMS*SKARVS Trigger: GGAGACGCGGGCCTTCGAGCAGCTCATGACCGACCT...CGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAATGGGAAAGCGCTGGCTGCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | AGGGTGGCAGGCCTAAGAGGGAGGGCATCTTGTGCAGGTGACACACCTGTAGCCCGTGAGAGGGCTGACTaGAGGCTGCCTGCGCCGAGA | + |
Preference number: 4 (lower is better) Translates to: RVAGLRGRASCAGDTPVARERAD*RLPAPR Trigger: TCTCGGCGCAGGCAGCCTCCAGTCAGCCCTCTCACG...GGCTACAGGTGTGTCACCTGCACAAGATGCCCTCCCTCTTAGGCCTGCCACCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | AGGGCTGCCTGGCCTTGGCGGTCAGACAGAAAGGCATCATGGTGCTCTGGTACCGGGGACACTTGGGCTTaGGCGTCTGTGGGCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: RAAWPWRSDRKASWCSGTGDTWA*ASVGRK Trigger: CTTCCTGCCCACAGACGCTCAAGCCCAAGTGTCCCC...GGTACCAGAGCACCATGATGCCTTTCTGTCTGACCGCCAAGGCCAGGCAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGCCTGCCGCTGCGTGTaGAGGGCGATCTTCTCACTG | + |
Preference number: 4 (lower is better) Translates to: GGREQGKGELILTSPHTRACRCV*RAIFSL Trigger: CAGTGAGAAGATCGCCCTGCACACGCAGCGGCAGGC...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | CGAGAGGAAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTGCCCCACACTTTGGCCACAGACGGCTaGGGGTGGCACTTGAGGGAC | + |
Preference number: 4 (lower is better) Translates to: REEEFAVGAQSGCQVPHTLATDG*GWHLRD Trigger: GTCCCTCAAGTGCCACCCGCAGCCGTCTGTGGCCAA...AGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTTCCTCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | CTGGGAGGCAGGATACGGGTTCAGTGGGCTGGTCGCAGAGAGCTGTCTGCTGAATTGGCCACAGACGGCTaGGGGTGGCACTTGAGGGAC | + |
Preference number: 4 (lower is better) Translates to: LGGRIRVQWAGRRELSAELATDG*GWHLRD Trigger: GTCCCTCAAGTGCCACCCGCAGCCGTCTGTGGCCAA...TTCAGCAGACAGCTCTCTGCGACCAGCCCACTGAACCCGTATCCTGCCTCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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CDS-3UTR GCA 90 bp | CAGCAGCTCCTTCCAGTGGGCTGGAGGGTGGCAGGCCTAAGAGGGAGGGCATCTCTTCTGTCAGGATGGTaGCTGGGAAGCTGCCACAGC | + |
Preference number: 4 (lower is better) Translates to: QQLLPVGWRVAGLRGRASLLSGW*LGSCHS Trigger: GCTGTGGCAGCTTCCCAGGCACCATCCTGACAGAAG...AGATGCCCTCCCTCTTAGGCCTGCCACCCTCCAGCCCACTGGAAGGAGCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | CCCCCAACATCACAGGATCGAGGGCGCCCAGACAGGGACTGGATCTCCTTGCTCAGGAGGCTGTTGCCGTaGCCAGCTCTCATCCAGGTG | + |
Preference number: 4 (lower is better) Translates to: PPTSQDRGRPDRDWISLLRRLLP*PALIQV Trigger: CACCTGGATGAGAGCTGGCCACGGCAACAGCCTCCT...GAGCAAGGAGATCCAGTCCCTGTCTGGGCGCCCTCGATCCTGTGATGTTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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3UTR CAA 72 bp | GCAGAGGCGTTGGCCACAGACGGCTGCGGGTGGCACTaGAGGGACGAGGAGAGTGCCATCTTACTGAGTGTG | + |
Preference number: 4 (lower is better) Translates to: AEALATDGCGWH*RDEESAILLSV Trigger: CACACTCAGTAAGATGGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGCCGTCTGTGGCCAACGCCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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CDS-3UTR TCA 90 bp | CGAGAGGAAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTGCCCCACACTTGTCCATGTCCAGGCTaGCCTCTGGCATGCCCGACA | + |
Preference number: 4 (lower is better) Translates to: REEEFAVGAQSGCQVPHTCPCPG*PLACPT Trigger: TGTCGGGCATGCCAGAGGTCAGCCTGGACATGGACA...AGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTTCCTCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | AGGGCTGCCTGGCCTTGGCGGTCAGACAGAAAGGCATCATGGTGCTCTGGTACCGGTAAGGATCCCCCGTaGTACTGGGTAAGGCGCAGC | + |
Preference number: 4 (lower is better) Translates to: RAAWPWRSDRKASWCSGTGKDPP*YWVRRS Trigger: GCTGCGCCTTACCCAGTACCACGGGGGATCCTTACC...GGTACCAGAGCACCATGATGCCTTTCTGTCTGACCGCCAAGGCCAGGCAGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | GGCCTGCAGCAGTACAACTGGTGCCATGGGCCGAAGAGTGCAGCTGTGTCTAGCGCAGCTGGCTCACGTTaGGTAAGGATCCCCCGTGGT | + |
Preference number: 4 (lower is better) Translates to: GLQQYNWCHGPKSAAVSSAAGSR*VRIPRG Trigger: ACCACGGGGGATCCTTACCCAACGTGAGCCAGCTGC...GCTAGACACAGCTGCACTCTTCGGCCCATGGCACCAGTTGTACTGCTGCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | TGTCACCTCACACCTGCCTCTTCCCCGGTGTGTGGGCGTCACCGACACGATGATCTCTCCACCAGCCCATaGTGGCGGGTTCCACGAACA | + |
Preference number: 4 (lower is better) Translates to: CHLTPASSPVCGRHRHDDLSTSP*WRVPRT Trigger: TGTTCGTGGAACCCGCCACCATGGGCTGGTGGAGAG...ATCATCGTGTCGGTGACGCCCACACACCGGGGAAGAGGCAGGTGTGAGGTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | AGGGTGGCAGGCCTAAGAGGGAGGGCATCTTGTGCAGGTGACACACCTGTAGCCGGGCTTGAGCGTCTGTaGGCAGGAAGGAAAGTGGGC | + |
Preference number: 4 (lower is better) Translates to: RVAGLRGRASCAGDTPVAGLERL*AGRKVG Trigger: GCCCACTTTCCTTCCTGCCCACAGACGCTCAAGCCC...GGCTACAGGTGTGTCACCTGCACAAGATGCCCTCCCTCTTAGGCCTGCCACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | ATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGTAGGGTATGGGGTGAGATCTGGGGGCTCCTGGGCATaGGGCTGCTGTAGGAGTGGC | + |
Preference number: 4 (lower is better) Translates to: IGWRKPQEQGSVGYGVRSGGSWA*GCCRSG Trigger: GCCACTCCTACAGCAGCCCCATGCCCAGGAGCCCCC...AGATCTCACCCCATACCCTACGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 72 bp | CAGGCACAGATGGGTCAGCTTCCTTCTACTCCACCCTaGCTCTCCTGGGTGGGGACAGCCACTGAGCCTCAG | + |
Preference number: 4 (lower is better) Translates to: QAQMGQLPSTPP*LSWVGTATEPQ Trigger: CTGAGGCTCAGTGGCTGTCCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 72 bp | ATCGATCTCTGCCTGAAGACGGACACGGGAGCTGGCTaGAGTGTGTATGCTGGGGCGCTGGGCAGCTCAGAG | + |
Preference number: 4 (lower is better) Translates to: IDLCLKTDTGAG*SVYAGALGSSE Trigger: CTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCTCCCGTGTCCGTCTTCAGGCAGAGATCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | CCTGCAGCCAGCGCTTTCCCATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGATCGGCTTGATGAAGTaGTGGCTGGAACTCTGGCGC | + |
Preference number: 4 (lower is better) Translates to: PAASAFPLAGESLRNRAAIGLMK*WLELWR Trigger: GCGCCAGAGTTCCAGCCATCACTTCATCAAGCCGAT...CGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAATGGGAAAGCGCTGGCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | CCTCTCCTCCTGTCTGTGAGGGAAAGGTGCGCATACAGGAAGCAGCAGCAAAGAGCTGCGGGTGGCACTTaGGGGACGAGGAGAGTGCCA | + |
Preference number: 4 (lower is better) Translates to: PLLLSVRERCAYRKQQQRAAGGT*GTRRVP Trigger: TGGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGC...TCTTTGCTGCTGCTTCCTGTATGCGCACCTTTCCCTCACAGACAGGAGGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | CAGCAGCTCCTTCCAGTGGGCTGGAGGGTGGCAGGCCTAAGAGGGAGGGCATCTTGTTCCCCACACTCATaGTACCAAAGAGGTGGTCGC | + |
Preference number: 4 (lower is better) Translates to: QQLLPVGWRVAGLRGRASCSPHS*YQRGGR Trigger: GCGACCACCTCTTTGGTAGCATGAGTGTGGGGAACA...AGATGCCCTCCCTCTTAGGCCTGCCACCCTCCAGCCCACTGGAAGGAGCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGGTTCTCGGTGGCTCTaGTGTACCAAAGGCACCTGC | + |
Preference number: 4 (lower is better) Translates to: GGREQGKGELILTSPHTRGSRWL*CTKGTC Trigger: GCAGGTGCCTTTGGTACAGCAGAGCCACCGAGAACC...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | CCTGCAGCCAGCGCTTTCCCATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGGGTCCAGCAGGCCCATaGTGGAGTCACTTAGCATGT | + |
Preference number: 4 (lower is better) Translates to: PAASAFPLAGESLRNRAAGPAGP*WSHLAC Trigger: ACATGCTAAGTGACTCCAGCATGGGCCTGCTGGACC...CGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAATGGGAAAGCGCTGGCTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | AGGGCTGCCTGGCCTTGGCGGTCAGACAGAAAGGCATCATGGTGCTCTGGTACCTGTCAGGATGGTGCCTaGGAAGCTGCCACAGCTGGA | + |
Preference number: 4 (lower is better) Translates to: RAAWPWRSDRKASWCSGTCQDGA*EAATAG Trigger: TCCAGCTGTGGCAGCTTCCCAGGCACCATCCTGACA...GGTACCAGAGCACCATGATGCCTTTCTGTCTGACCGCCAAGGCCAGGCAGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | AGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGTGCTAAAACCCACCACCCTGGGCGATCTTCTCACTaGACTTCCGCGGGTTGGCGC | + |
Preference number: 4 (lower is better) Translates to: RRAHPHFSPHSCAKTHHPGRSSH*TSAGWR Trigger: GCGCCAACCCGCGGAAGTTCAGTGAGAAGATCGCCC...AGGGTGGTGGGTTTTAGCACACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | CGAGAGGAAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTGCCCCACACTTGTCTGCTGAAGCCTTaGTGTGCTTCAGGGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: REEEFAVGAQSGCQVPHTCLLKP*CASGPG Trigger: TCCTGGCCCTGAAGCACATCAAGGCTTCAGCAGACA...AGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTTCCTCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | AGGGTGGCAGGCCTAAGAGGGAGGGCATCTTGTGCAGGTGACACACCTGTAGCCGGTCCTGGGGTTTGGTaGTCAGAGCACTCGTGTGAA | + |
Preference number: 4 (lower is better) Translates to: RVAGLRGRASCAGDTPVAGPGVW*SEHSCE Trigger: TTCACACGAGTGCTCTGAGCACCAAACCCCAGGACC...GGCTACAGGTGTGTCACCTGCACAAGATGCCCTCCCTCTTAGGCCTGCCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | GGCCTGCAGCAGTACAACTGGTGCCATGGGCCGAAGAGTGCAGCTGTGTCTAGCGCTGAAGCCTTGATGTaGTTCAGGGCCAGGAGAGAG | + |
Preference number: 4 (lower is better) Translates to: GLQQYNWCHGPKSAAVSSAEALM*FRARRE Trigger: CTCTCTCCTGGCCCTGAAGCACATCAAGGCTTCAGC...GCTAGACACAGCTGCACTCTTCGGCCCATGGCACCAGTTGTACTGCTGCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | CAGGCACAGATGGGTCAGCTTCCTTCTACTCCACCCTTGCTCTCCTGGGTGGGGTGGTGCCTGGGAAGCTaGCACAGCTGGAATATGGGT | + |
Preference number: 4 (lower is better) Translates to: QAQMGQLPSTPPLLSWVGWCLGS*HSWNMG Trigger: ACCCATATTCCAGCTGTGGCAGCTTCCCAGGCACCA...CCCCACCCAGGAGAGCAAGGGTGGAGTAGAAGGAAGCTGACCCATCTGTGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | AGGGCTGCCTGGCCTTGGCGGTCAGACAGAAAGGCATCATGGTGCTCTGGTACCCTCAAGGGTTCGATCTaGAGCTCCTCTTCCAGAGGG | + |
Preference number: 4 (lower is better) Translates to: RAAWPWRSDRKASWCSGTLKGSI*SSSSRG Trigger: CCCTCTGGAAGAGGAGCTGCAGATCGAACCCTTGAG...GGTACCAGAGCACCATGATGCCTTTCTGTCTGACCGCCAAGGCCAGGCAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | TGTCACCTCACACCTGCCTCTTCCCCGGTGTGTGGGCGTCACCGACACGATGATTCCACCAGCCCATGGTaGCGGGTTCCACGAACATTA | + |
Preference number: 4 (lower is better) Translates to: CHLTPASSPVCGRHRHDDSTSPW*RVPRTL Trigger: TAATGTTCGTGGAACCCGCCACCATGGGCTGGTGGA...ATCATCGTGTCGGTGACGCCCACACACCGGGGAAGAGGCAGGTGTGAGGTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | GCCAGGTGCCCCACACTCCTGGGGCTTGGTGTGATCAGCCATGCTGGATGCACTATCAAACTGTCTCCCTaGCTTGTCCCCAGACCTTCG | + |
Preference number: 4 (lower is better) Translates to: ARCPTLLGLGVISHAGCTIKLSP*LVPRPS Trigger: CGAAGGTCTGGGGACAAGCCAGGGAGACAGTTTGAT...AGTGCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | CGAGAGGAAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTGCCCCACACTGGCCACTCAGGTTTGTaGTGGAAAGAGACGGGTTGC | + |
Preference number: 4 (lower is better) Translates to: REEEFAVGAQSGCQVPHTGHSGL*WKETGC Trigger: GCAACCCGTCTCTTTCCACCACAAACCTGAGTGGCC...AGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTTCCTCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | CACCGGCAGGGTGTTTGCTGGCTCCACCCCAGCTTTCTCTGGCCATTTCAGTTCTGGGCAGTGAGGAGCTaGAAGTCTGACTGTGGCAGG | + |
Preference number: 4 (lower is better) Translates to: HRQGVCWLHPSFLWPFQFWAVRS*KSDCGR Trigger: CCTGCCACAGTCAGACTTCCAGCTCCTCACTGCCCA...GAACTGAAATGGCCAGAGAAAGCTGGGGTGGAGCCAGCAAACACCCTGCCGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | AGCTGGCTTGAGTGTGTATGCTGGGGCGCTGGGCAGCTCAGAGGAGTGAAAAGCCATCCGGGAAGAAGCTaGTCAAAGCTGAGCCCTGGG | + |
Preference number: 4 (lower is better) Translates to: SWLECVCWGAGQLRGVKSHPGRS*SKLSPG Trigger: CCCAGGGCTCAGCTTTGACCAGCTTCTTCCCGGATG...GCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | CACGATGATCCCACGGATCAGGCTCAACGCAGAGAGCAGATTGTGCTGGAAACCGAGGAAAGGCAGGGCTaGGCCTCATGGGCTGTTGGT | + |
Preference number: 4 (lower is better) Translates to: HDDPTDQAQRREQIVLETEERQG*ASWAVG Trigger: ACCAACAGCCCATGAGGCCCAGCCCTGCCTTTCCTC...GGTTTCCAGCACAATCTGCTCTCTGCGTTGAGCCTGATCCGTGGGATCATCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | AGGGCTGCCTGGCCTTGGCGGTCAGACAGAAAGGCATCATGGTGCTCTGGTACCCTCATCCAGGTGCTGTaGAGAATAACTGGCTGCGAA | + |
Preference number: 4 (lower is better) Translates to: RAAWPWRSDRKASWCSGTLIQVL*RITGCE Trigger: TTCGCAGCCAGTTATTCTTCACAGCACCTGGATGAG...GGTACCAGAGCACCATGATGCCTTTCTGTCTGACCGCCAAGGCCAGGCAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | ATGTGGGAAAGCATTGCCGCCCCCAACATCACAGGATCGAGGGCGCCCAGACAGCTCATCCAGGTGCTGTaGAGAATAACTGGCTGCGAA | + |
Preference number: 4 (lower is better) Translates to: MWESIAAPNITGSRAPRQLIQVL*RITGCE Trigger: TTCGCAGCCAGTTATTCTTCACAGCACCTGGATGAG...CTGTCTGGGCGCCCTCGATCCTGTGATGTTGGGGGCGGCAATGCTTTCCCACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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CDS-3UTR TCA 90 bp | CCCCCAACATCACAGGATCGAGGGCGCCCAGACAGGGACTGGATCTCCTTGCTCGTGCAGATGTTAGCCTaGATCCAGGATGCTTCTCTT | + |
Preference number: 4 (lower is better) Translates to: PPTSQDRGRPDRDWISLLVQMLA*IQDASL Trigger: AAGAGAAGCATCCTGGATTCAGGCTAACATCTGCAC...GAGCAAGGAGATCCAGTCCCTGTCTGGGCGCCCTCGATCCTGTGATGTTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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CDS-3UTR CCA 90 bp | ATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGTAGGGTATGGGGTGAGATCTAGGATACGGGTTCAGTaGGCTGGTCGCAGAGAGCTG | + |
Preference number: 4 (lower is better) Translates to: IGWRKPQEQGSVGYGVRSRIRVQ*AGRREL Trigger: CAGCTCTCTGCGACCAGCCCACTGAACCCGTATCCT...AGATCTCACCCCATACCCTACGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | GGCCTGCAGCAGTACAACTGGTGCCATGGGCCGAAGAGTGCAGCTGTGTCTAGCCTCAGAGCACTCGTGTaGAGAGCAGAATCAGAATTG | + |
Preference number: 4 (lower is better) Translates to: GLQQYNWCHGPKSAAVSSLRALV*RAESEL Trigger: CAATTCTGATTCTGCTCTTCACACGAGTGCTCTGAG...GCTAGACACAGCTGCACTCTTCGGCCCATGGCACCAGTTGTACTGCTGCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | GCCAGGTGCCCCACACTCCTGGGGCTTGGTGTGATCAGCCATGCTGGATGCACTAGCCTGAATCCAGGATaGTTCTCTTCTTTCCAAGGA | + |
Preference number: 4 (lower is better) Translates to: ARCPTLLGLGVISHAGCTSLNPG*FSSFQG Trigger: TCCTTGGAAAGAAGAGAAGCATCCTGGATTCAGGCT...AGTGCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | CACCGGCAGGGTGTTTGCTGGCTCCACCCCAGCTTTCTCTGGCCATTTCAGTTCGAGAGGCCTGTGTTCTaGCCATTATGTGGGAAAGCA | + |
Preference number: 4 (lower is better) Translates to: HRQGVCWLHPSFLWPFQFERPVF*PLCGKA Trigger: TGCTTTCCCACATAATGGCCAGAACACAGGCCTCTC...GAACTGAAATGGCCAGAGAAAGCTGGGGTGGAGCCAGCAAACACCCTGCCGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | AGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGTGCTAAAACCCACCACCCTATGCTACCAAAGAGGTaGTCGCTGGTGTCCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: RRAHPHFSPHSCAKTHHPMLPKR*SLVSRE Trigger: CTCCCTGGACACCAGCGACCACCTCTTTGGTAGCAT...AGGGTGGTGGGTTTTAGCACACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGGAGGAGCTGGAAGTCTaGCTGTGGCAGGGAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTEELEV*LWQGGG Trigger: GCCCCCTCCCTGCCACAGTCAGACTTCCAGCTCCTC...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | GCTGATGGGAATCTGAGGTTTGGAGCACTGACGTGTTACACAGCATTTTCTACAGAAGCGGTTCCGGGCTaGCCTCTCCACCAGCCCATG | + |
Preference number: 4 (lower is better) Translates to: ADGNLRFGALTCYTAFSTEAVPG*PLHQPM Trigger: CATGGGCTGGTGGAGAGGCCAGCCCGGAACCGCTTC...TGTAGAAAATGCTGTGTAACACGTCAGTGCTCCAAACCTCAGATTCCCATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | CCTGCAGCCAGCGCTTTCCCATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGTTACTTCGAGAACTTTaGAGACCAGAGGAGGTTCTT | + |
Preference number: 4 (lower is better) Translates to: PAASAFPLAGESLRNRAALLREL*RPEEVL Trigger: AAGAACCTCCTCTGGTCTCCAAAGTTCTCGAAGTAA...CGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAATGGGAAAGCGCTGGCTGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 72 bp | GACGGCTGGGTAAGCTTCTTCATTTTAAGTGAGCCATaGGACAGAGTGATGGCTGGGCCCAGAATACCCGCC | + |
Preference number: 4 (lower is better) Translates to: DGWVSFFILSEP*DRVMAGPRIPA Trigger: GGCGGGTATTCTGGGCCCAGCCATCACTCTGTCCAATGGCTCACTTAAAATGAAGAAGCTTACCCAGCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | GCTGATGGGAATCTGAGGTTTGGAGCACTGACGTGTTACACAGCATTTTCTACATCCCCAGACCTTCGGTaGAGGGGGTGGAAGCGGTTC | + |
Preference number: 4 (lower is better) Translates to: ADGNLRFGALTCYTAFSTSPDLR*RGWKRF Trigger: GAACCGCTTCCACCCCCTTCACCGAAGGTCTGGGGA...TGTAGAAAATGCTGTGTAACACGTCAGTGCTCCAAACCTCAGATTCCCATCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | GCTGATGGGAATCTGAGGTTTGGAGCACTGACGTGTTACACAGCATTTTCTACATGCTGTAGGAGTGGCTaGGGCAGCTCCTGGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: ADGNLRFGALTCYTAFSTCCRSG*GSSWGV Trigger: CACACCCCAGGAGCTGCCTCAGCCACTCCTACAGCA...TGTAGAAAATGCTGTGTAACACGTCAGTGCTCCAAACCTCAGATTCCCATCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | GCTGATGGGAATCTGAGGTTTGGAGCACTGACGTGTTACACAGCATTTTCTACACTGAGCCCTGGGCAGTaGGGAGCTGGAAGTCTGACT | + |
Preference number: 4 (lower is better) Translates to: ADGNLRFGALTCYTAFSTLSPGQ*GAGSLT Trigger: AGTCAGACTTCCAGCTCCTCACTGCCCAGGGCTCAG...TGTAGAAAATGCTGTGTAACACGTCAGTGCTCCAAACCTCAGATTCCCATCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR GCA 90 bp | CAGCTGGAAGGTTGCCCACGCTGTTCCCCACACTCATGCTACCAAAGAGGTGGTAGCCTGAATCCAGGATaGTTCTCTTCTTTCCAAGGA | + |
Preference number: 4 (lower is better) Translates to: QLEGCPRCSPHSCYQRGGSLNPG*FSSFQG Trigger: TCCTTGGAAAGAAGAGAAGCATCCTGGATTCAGGCT...ACCACCTCTTTGGTAGCATGAGTGTGGGGAACAGCGTGGGCAACCTTCCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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CDS-3UTR CCA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGAGGAGGCTGTTGCCGTaGCCAGCTCTCATCCAGGTG | + |
Preference number: 4 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTRRLLP*PALIQV Trigger: CACCTGGATGAGAGCTGGCCACGGCAACAGCCTCCT...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGCAAAGAGGTGGTCGCTaGTGTCCAGGGAGGCTGGCA | + |
Preference number: 4 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTQRGGR*CPGRLA Trigger: TGCCAGCCTCCCTGGACACCAGCGACCACCTCTTTG...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | AGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGTGCTAAAACCCACCACCCTGCCACAGCTGGAATATaGGTTTGGTCTCAAGTGGAA | + |
Preference number: 4 (lower is better) Translates to: RRAHPHFSPHSCAKTHHPATAGI*VWSQVE Trigger: TTCCACTTGAGACCAAACCCATATTCCAGCTGTGGC...AGGGTGGTGGGTTTTAGCACACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | GCTGATGGGAATCTGAGGTTTGGAGCACTGACGTGTTACACAGCATTTTCTACAAGGGGTCCTGGGGTTTaGTGCTCAGAGCACTCGTGT | + |
Preference number: 4 (lower is better) Translates to: ADGNLRFGALTCYTAFSTRGPGV*CSEHSC Trigger: ACACGAGTGCTCTGAGCACCAAACCCCAGGACCCCT...TGTAGAAAATGCTGTGTAACACGTCAGTGCTCCAAACCTCAGATTCCCATCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 72 bp | GAGTGTGGCTTGGATGGAAGGGTTACTTCGAGAACTTaGGAGACCAGAGGAGGTTCTTATCCCCAGGTGAGT | + |
Preference number: 4 (lower is better) Translates to: ECGLDGRVTSRT*ETRGGSYPQVS Trigger: ACTCACCTGGGGATAAGAACCTCCTCTGGTCTCCAAAGTTCTCGAAGTAACCCTTCCATCCAAGCCACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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CDS-3UTR TCA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGCAGAGAGCTGTCTGCTaGAGCCTTGATGTGCTTCAG | + |
Preference number: 4 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTQRAVC*SLDVLQ Trigger: CTGAAGCACATCAAGGCTTCAGCAGACAGCTCTCTG...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | GCTGATGGGAATCTGAGGTTTGGAGCACTGACGTGTTACACAGCATTTTCTACATATCTTCTGTCAGGATaGTGCCTGGGAAGCTGCCAC | + |
Preference number: 4 (lower is better) Translates to: ADGNLRFGALTCYTAFSTYLLSG*CLGSCH Trigger: GTGGCAGCTTCCCAGGCACCATCCTGACAGAAGATA...TGTAGAAAATGCTGTGTAACACGTCAGTGCTCCAAACCTCAGATTCCCATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR TCA 90 bp | GCTGATGGGAATCTGAGGTTTGGAGCACTGACGTGTTACACAGCATTTTCTACAGTGCAGATGTTAGCCTaGATCCAGGATGCTTCTCTT | + |
Preference number: 4 (lower is better) Translates to: ADGNLRFGALTCYTAFSTVQMLA*IQDASL Trigger: AAGAGAAGCATCCTGGATTCAGGCTAACATCTGCAC...TGTAGAAAATGCTGTGTAACACGTCAGTGCTCCAAACCTCAGATTCCCATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CCA 90 bp | GCTGATGGGAATCTGAGGTTTGGAGCACTGACGTGTTACACAGCATTTTCTACACTGAGTAGTGGAGGTTaGTTAGATCTGGTAACGACC | + |
Preference number: 4 (lower is better) Translates to: ADGNLRFGALTCYTAFSTLSSGG*LDLVTT Trigger: GGTCGTTACCAGATCTAACCAACCTCCACTACTCAG...TGTAGAAAATGCTGTGTAACACGTCAGTGCTCCAAACCTCAGATTCCCATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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3UTR CAA 72 bp | TGGAAGCTACTTTATACAAAGTCCGATCTTTCAATATaGCTTAACAAAAGGCCGGGAGTTAGGACACTGGCC | + |
Preference number: 4 (lower is better) Translates to: WKLLYTKSDLSI*LNKRPGVRTLA Trigger: GGCCAGTGTCCTAACTCCCGGCCTTTTGTTAAGCAATATTGAAAGATCGGACTTTGTATAAAGTAGCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | TCAGGGCCAGGAGAGAGCGTGAGAGGGCTGACTGGAGGCTGCCTGCGCCGAGAGGGCTGCGGGTGGCACTaGAGGGACGAGGAGAGTGCC | + |
Preference number: 5 (lower is better) Translates to: SGPGESVRGLTGGCLRREGCGWH*RDEESA Trigger: GGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGCC...CTCTCGGCGCAGGCAGCCTCCAGTCAGCCCTCTCACGCTCTCTCCTGGCCCTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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CDS-3UTR CAA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTCTGAACTTCCGCGGGTaGGCGCTGCCCGAACCGGGC | + |
Preference number: 5 (lower is better) Translates to: GGREQGKGELILTSPHTRLNFRG*ALPEPG Trigger: GCCCGGTTCGGGCAGCGCCAACCCGCGGAAGTTCAG...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS GCA 90 bp | AGCCGGAGGGAGGGGTGCAGAGCAGAGGCGTTGGCCACAGACGGCTaGGGGTGGCACTTGAGGGACGAGGAGAGTGCCATCTTACTGAGT | + |
Preference number: 5 (lower is better) Translates to: SRREGCRAEALATDG*GWHLRDEESAILLS Trigger: ACTCAGTAAGATGGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGCCGTCTGTGGCCAACGCCTCTGCTCTGCACCCCTCCCTCCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122255.8 ENSMUST00000149176.2 |
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CDS CCA 90 bp | GCCTTGATGTGCTTCAGGGCCAGGAGAGAGCGTGAGAGGGCTGACTaGAGGCTGCCTGCGCCGAGAGGGGCCACTCAGGTTTGTGGTGGA | + |
Preference number: 5 (lower is better) Translates to: ALMCFRARRERERAD*RLPAPRGATQVCGG Trigger: TCCACCACAAACCTGAGTGGCCCCTCTCGGCGCAGGCAGCCTCCAGTCAGCCCTCTCACGCTCTCTCCTGGCCCTGAAGCACATCAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGGCTGCGGGTGGCACTaGAGGGACGAGGAGAGTGCC | + |
Preference number: 5 (lower is better) Translates to: GGREQGKGELILTSPHTRGCGWH*RDEESA Trigger: GGCACTCTCCTCGTCCCTCAAGTGCCACCCGCAGCC...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS TCA 90 bp | GCATTCCCATCAAACTGTCTCCCTGGCTTGTCCCCAGACCTTCGGTaGAGGGGGTGGAAGCGGTTCCGGGCTGGCCTCTCCACCAGCCCA | + |
Preference number: 5 (lower is better) Translates to: AFPSNCLPGLSPDLR*RGWKRFRAGLSTSP Trigger: TGGGCTGGTGGAGAGGCCAGCCCGGAACCGCTTCCACCCCCTTCACCGAAGGTCTGGGGACAAGCCAGGGAGACAGTTTGATGGGAATGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS GCA 90 bp | TGTGCTTCAGGGCCAGGAGAGAGCGTGAGAGGGCTGACTGGAGGCTaGCTGCGCCGAGAGGGGCCACTCAGGTTTGTGGTGGAAAGAGAC | + |
Preference number: 5 (lower is better) Translates to: CASGPGESVRGLTGG*LRREGPLRFVVERD Trigger: GTCTCTTTCCACCACAAACCTGAGTGGCCCCTCTCGGCGCAGGCAGCCTCCAGTCAGCCCTCTCACGCTCTCTCCTGGCCCTGAAGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | AGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGTGCTAAAACCCACCACCCTCCTGGGGCTGCTGAGTaGGGGGCTCCTGGGCATGGG | + |
Preference number: 5 (lower is better) Translates to: RRAHPHFSPHSCAKTHHPPGAAE*GAPGHG Trigger: CCCATGCCCAGGAGCCCCCAACTCAGCAGCCCCAGG...AGGGTGGTGGGTTTTAGCACACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | GGGGGAAGGGAGCAGGGCAAAGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGGGCCTCATGGGCTGTaGGTCAAAGCGCACATCCGG | + |
Preference number: 5 (lower is better) Translates to: GGREQGKGELILTSPHTRGPHGL*VKAHIR Trigger: CCGGATGTGCGCTTTGACCAACAGCCCATGAGGCCC...ACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCTTTGCCCTGCTCCCTTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CCA 90 bp | TGGTCAAAGCGCACATCCGGGAAGAAGCTGGTCAAAGCTGAGCCCTaGGCAGTGAGGAGCTGGAAGTCTGACTGTGGCAGGGAGGGGGCT | + |
Preference number: 5 (lower is better) Translates to: WSKRTSGKKLVKAEP*AVRSWKSDCGREGA Trigger: AGCCCCCTCCCTGCCACAGTCAGACTTCCAGCTCCTCACTGCCCAGGGCTCAGCTTTGACCAGCTTCTTCCCGGATGTGCGCTTTGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | GCCTTGATGTGCTTCAGGGCCAGGAGAGAGCGTGAGAGGGCTGACTGGAGGCTGGTGGAAAGAGACGGGTaGCTAAGGGAGAAGAGCCGG | + |
Preference number: 5 (lower is better) Translates to: ALMCFRARRERERADWRLVERDG*LREKSR Trigger: CCGGCTCTTCTCCCTTAGCAACCCGTCTCTTTCCAC...CAGCCTCCAGTCAGCCCTCTCACGCTCTCTCCTGGCCCTGAAGCACATCAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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CDS-3UTR CAA 90 bp | CACGATGATCCCACGGATCAGGCTCAACGCAGAGAGCAGATTGTGCTGGAAACCCGCAGCTGGCTCACGTaGGGTAAGGATCCCCCGTGG | + |
Preference number: 5 (lower is better) Translates to: HDDPTDQAQRREQIVLETRSWLT*GKDPPW Trigger: CCACGGGGGATCCTTACCCAACGTGAGCCAGCTGCG...GGTTTCCAGCACAATCTGCTCTCTGCGTTGAGCCTGATCCGTGGGATCATCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | AGGGTGGCAGGCCTAAGAGGGAGGGCATCTTGTGCAGGTGACACACCTGTAGCCGTGGAAAGAGACGGGTaGCTAAGGGAGAAGAGCCGG | + |
Preference number: 5 (lower is better) Translates to: RVAGLRGRASCAGDTPVAVERDG*LREKSR Trigger: CCGGCTCTTCTCCCTTAGCAACCCGTCTCTTTCCAC...GGCTACAGGTGTGTCACCTGCACAAGATGCCCTCCCTCTTAGGCCTGCCACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | ACGCTGTTCCCCACACTCATGCTACCAAAGAGGTGGTCGCTGGTGTCCAGGGAGTTTCCAAGGAGGCTGTaGCCGTGGCCAGCTCTCATC | + |
Preference number: 5 (lower is better) Translates to: TLFPTLMLPKRWSLVSREFPRRL*PWPALI Trigger: GATGAGAGCTGGCCACGGCAACAGCCTCCTTGGAAA...CTCCCTGGACACCAGCGACCACCTCTTTGGTAGCATGAGTGTGGGGAACAGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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CDS TCA 90 bp | CCACAGAGGGGTCCAGCAGGCCCATGCTGGAGTCACTTAGCATGTTaGGTCCATCGAGGCTCAAGGGTTCGATCTGCAGCTCCTCTTCCA | + |
Preference number: 5 (lower is better) Translates to: PQRGPAGPCWSHLAC*VHRGSRVRSAAPLP Trigger: TGGAAGAGGAGCTGCAGATCGAACCCTTGAGCCTCGATGGACTCAACATGCTAAGTGACTCCAGCATGGGCCTGCTGGACCCCTCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | CGAGAGGAAGAATTTGCTGTGGGGGCCCAGTCTGGATGCCAGGTGCCCCACACTTTATGTGGGAAAGCATaGCCGCCCCCAACATCACAG | + |
Preference number: 5 (lower is better) Translates to: REEEFAVGAQSGCQVPHTLCGKA*PPPTSQ Trigger: CTGTGATGTTGGGGGCGGCAATGCTTTCCCACATAA...AGTGTGGGGCACCTGGCATCCAGACTGGGCCCCCACAGCAAATTCTTCCTCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | ATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGTAGGGTATGGGGTGAGATCTATGGCAGCTGGAAGGTaGCCCACGCTGTTCCCCACA | + |
Preference number: 5 (lower is better) Translates to: IGWRKPQEQGSVGYGVRSMAAGR*PTLFPT Trigger: TGTGGGGAACAGCGTGGGCAACCTTCCAGCTGCCAT...AGATCTCACCCCATACCCTACGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | GCCAGGTGCCCCACACTCCTGGGGCTTGGTGTGATCAGCCATGCTGGATGCACTGAGTCACTTAGCATGTaGAGTCCATCGAGGCTCAAG | + |
Preference number: 5 (lower is better) Translates to: ARCPTLLGLGVISHAGCTESLSM*SPSRLK Trigger: CTTGAGCCTCGATGGACTCAACATGCTAAGTGACTC...AGTGCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGGGGCACCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS GCA 90 bp | GAGTCACTTAGCATGTTGAGTCCATCGAGGCTCAAGGGTTCGATCTaGAGCTCCTCTTCCAGAGGGAACGGGGTGTCCATGTCCAGGCTG | + |
Preference number: 5 (lower is better) Translates to: ESLSMLSPSRLKGSI*SSSSRGNGVSMSRL Trigger: CAGCCTGGACATGGACACCCCGTTCCCTCTGGAAGAGGAGCTGCAGATCGAACCCTTGAGCCTCGATGGACTCAACATGCTAAGTGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | CCTCTCCTCCTGTCTGTGAGGGAAAGGTGCGCATACAGGAAGCAGCAGCAAAGATTTCCAAGGAGGCTGTaGCCGTGGCCAGCTCTCATC | + |
Preference number: 5 (lower is better) Translates to: PLLLSVRERCAYRKQQQRFPRRL*PWPALI Trigger: GATGAGAGCTGGCCACGGCAACAGCCTCCTTGGAAA...TCTTTGCTGCTGCTTCCTGTATGCGCACCTTTCCCTCACAGACAGGAGGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | GAAGCCTTGATGTGCTTCAGGGCCAGGAGAGAGCGTGAGAGGGCTGACTGGAGGCTTACTGAGTGTGGCTaGGATGGAAGGGTTACTTCG | + |
Preference number: 5 (lower is better) Translates to: EALMCFRARRERERADWRLTECG*DGRVTS Trigger: CGAAGTAACCCTTCCATCCAAGCCACACTCAGTAAG...CCTCCAGTCAGCCCTCTCACGCTCTCTCCTGGCCCTGAAGCACATCAAGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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CDS-3UTR CAA 90 bp | AGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGTGCTAAAACCCACCACCCTAGGGGCCACTCAGGTTaGTGGTGGAAAGAGACGGGT | + |
Preference number: 5 (lower is better) Translates to: RRAHPHFSPHSCAKTHHPRGHSG*WWKETG Trigger: ACCCGTCTCTTTCCACCACAAACCTGAGTGGCCCCT...AGGGTGGTGGGTTTTAGCACACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | AGGAGAGCTCATCCTCACTTCTCCCCACACTCGTGTGCTAAAACCCACCACCCTCTGTCTGCTGAAGCCTaGATGTGCTTCAGGGCCAGG | + |
Preference number: 5 (lower is better) Translates to: RRAHPHFSPHSCAKTHHPLSAEA*MCFRAR Trigger: CCTGGCCCTGAAGCACATCAAGGCTTCAGCAGACAG...AGGGTGGTGGGTTTTAGCACACGAGTGTGGGGAGAAGTGAGGATGAGCTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CCA 90 bp | GCTGTTGCCGTGGCCAGCTCTCATCCAGGTGCTGTGAAGAATAACTaGCTGCGAAAGCATTCCCATCAAACTGTCTCCCTGGCTTGTCCC | + |
Preference number: 5 (lower is better) Translates to: AVAVASSHPGAVKNN*LRKHSHQTVSLACP Trigger: GGGACAAGCCAGGGAGACAGTTTGATGGGAATGCTTTCGCAGCCAGTTATTCTTCACAGCACCTGGATGAGAGCTGGCCACGGCAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | AGGGTGGCAGGCCTAAGAGGGAGGGCATCTTGTGCAGGTGACACACCTGTAGCCAGCTGGAATATGGGTTaGGTCTCAAGTGGAATGAGT | + |
Preference number: 5 (lower is better) Translates to: RVAGLRGRASCAGDTPVASWNMG*VSSGMS Trigger: ACTCATTCCACTTGAGACCAAACCCATATTCCAGCT...GGCTACAGGTGTGTCACCTGCACAAGATGCCCTCCCTCTTAGGCCTGCCACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS TCA 90 bp | TTTCCAAGGAGGCTGTTGCCGTGGCCAGCTCTCATCCAGGTGCTGTaGAGAATAACTGGCTGCGAAAGCATTCCCATCAAACTGTCTCCC | + |
Preference number: 5 (lower is better) Translates to: FPRRLLPWPALIQVL*RITGCESIPIKLSP Trigger: GGGAGACAGTTTGATGGGAATGCTTTCGCAGCCAGTTATTCTTCACAGCACCTGGATGAGAGCTGGCCACGGCAACAGCCTCCTTGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | CCTCTCCTCCTGTCTGTGAGGGAAAGGTGCGCATACAGGAAGCAGCAGCAAAGACTTACTGAGTGTGGCTaGGATGGAAGGGTTACTTCG | + |
Preference number: 5 (lower is better) Translates to: PLLLSVRERCAYRKQQQRLTECG*DGRVTS Trigger: CGAAGTAACCCTTCCATCCAAGCCACACTCAGTAAG...TCTTTGCTGCTGCTTCCTGTATGCGCACCTTTCCCTCACAGACAGGAGGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | AGCTGGCTTGAGTGTGTATGCTGGGGCGCTGGGCAGCTCAGAGGAGTGAAAAGCAGAGCAGAATCAGAATaGGTCCTGTTAAGTGCAGAT | + |
Preference number: 5 (lower is better) Translates to: SWLECVCWGAGQLRGVKSRAESE*VLLSAD Trigger: ATCTGCACTTAACAGGACCAATTCTGATTCTGCTCT...GCTTTTCACTCCTCTGAGCTGCCCAGCGCCCCAGCATACACACTCAAGCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS TCA 90 bp | TTTCCAAGGAGGCTGTTGCCGTGGCCAGCTCTCATCCAGGTGCTGTaGAGAATAACTGGCTGCGAAAGCATTCCCATCAAACTGTCTCNN | + |
Preference number: 5 (lower is better) Translates to: FPRRLLPWPALIQVL*RITGCESIPIKLSX Trigger: NNGAGACAGTTTGATGGGAATGCTTTCGCAGCCAGTTATTCTTCACAGCACCTGGATGAGAGCTGGCCACGGCAACAGCCTCCTTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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CDS-3UTR CAA 90 bp | ATTGGCTGGAGAAAGCCTCAGGAACAGGGCAGCGTAGGGTATGGGGTGAGATCTAGGCCTTTGAACAGGTaGCTGTTTGTATCTTCTGTC | + |
Preference number: 5 (lower is better) Translates to: IGWRKPQEQGSVGYGVRSRPLNR*LFVSSV Trigger: GACAGAAGATACAAACAGCAACCTGTTCAAAGGCCT...AGATCTCACCCCATACCCTACGCTGCCCTGTTCCTGAGGCTTTCTCCAGCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS GCA 90 bp | TCAGAATTGGTCCTGTTAAGTGCAGATGTTAGCCTGAATCCAGGATaGTTCTCTTCTTTCCAAGGAGGCTGTTGCCGTGGCCAGCTCTCA | + |
Preference number: 5 (lower is better) Translates to: SELVLLSADVSLNPG*FSSFQGGCCRGQLS Trigger: TGAGAGCTGGCCACGGCAACAGCCTCCTTGGAAAGAAGAGAAGCATCCTGGATTCAGGCTAACATCTGCACTTAACAGGACCAATTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CCA 90 bp | TGTTTGTATCTTCTGTCAGGATGGTGCCTGGGAAGCTGCCACAGCTaGAATATGGGTTTGGTCTCAAGTGGAATGAGTCCTGTGGTTCTC | + |
Preference number: 5 (lower is better) Translates to: CLYLLSGWCLGSCHS*NMGLVSSGMSPVVL Trigger: GAGAACCACAGGACTCATTCCACTTGAGACCAAACCCATATTCCAGCTGTGGCAGCTTCCCAGGCACCATCCTGACAGAAGATACAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS-3UTR CAA 90 bp | CAGAAGAGCCCAACAGGAAATGTCTTCAGATATGTGCACGAGCATGAATACACGAGGGACTGGATCTCCTaGCTCTCCCACAGGTGTTTA | + |
Preference number: 5 (lower is better) Translates to: QKSPTGNVFRYVHEHEYTRDWIS*LSHRCL Trigger: TAAACACCTGTGGGAGAGCAAGGAGATCCAGTCCCT...CGTGTATTCATGCTCGTGCACATATCTGAAGACATTTCCTGTTGGGCTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CAA 90 bp | CTGCGCCGAGAGGGGCCACTCAGGTTTGTGGTGGAAAGAGACGGGTaGCTAAGGGAGAAGAGCCGGAGGGAGGGGTGCAGAGCAGAGGCG | + |
Preference number: 6 (lower is better) Translates to: LRREGPLRFVVERDG*LREKSRREGCRAEA Trigger: CGCCTCTGCTCTGCACCCCTCCCTCCGGCTCTTCTCCCTTAGCAACCCGTCTCTTTCCACCACAAACCTGAGTGGCCCCTCTCGGCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS TCA 72 bp | TCAAACTGTCTCCCTGGCTTGTCCCCAGACCTTCGGTaGAGGGGGTGGAAGCGGTTCCGGGCTGGCCTCTCC | + |
Preference number: 6 (lower is better) Translates to: SNCLPGLSPDLR*RGWKRFRAGLS Trigger: GGAGAGGCCAGCCCGGAACCGCTTCCACCCCCTTCACCGAAGGTCTGGGGACAAGCCAGGGAGACAGTTTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CAA 72 bp | TGGAACTCTGGCGCGCTGTTCCGCAGCTGGCTCACGTaGGGTAAGGATCCCCCGTGGTACTGGGTAAGGCGC | + |
Preference number: 6 (lower is better) Translates to: WNSGALFRSWLT*GKDPPWYWVRR Trigger: GCGCCTTACCCAGTACCACGGGGGATCCTTACCCAACGTGAGCCAGCTGCGGAACAGCGCGCCAGAGTTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CCA 72 bp | AGTGATGGCTGGAACTCTGGCGCGCTGTTCCGCAGCTaGCTCACGTTGGGTAAGGATCCCCCGTGGTACTGG | + |
Preference number: 6 (lower is better) Translates to: SDGWNSGALFRS*LTLGKDPPWYW Trigger: CCAGTACCACGGGGGATCCTTACCCAACGTGAGCCAGCTGCGGAACAGCGCGCCAGAGTTCCAGCCATCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CCA 72 bp | AAGGGGGTGGTGGGGACACTTGGGCTTGAGCGTCTGTaGGCAGGAAGGAAAGTGGGCTCTGCTCTGAGGTCA | + |
Preference number: 6 (lower is better) Translates to: KGVVGTLGLERL*AGRKVGSALRS Trigger: TGACCTCAGAGCAGAGCCCACTTTCCTTCCTGCCCACAGACGCTCAAGCCCAAGTGTCCCCACCACCCCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CAA 72 bp | GAGGGGCCACTCAGGTTTGTGGTGGAAAGAGACGGGTaGCTAAGGGAGAAGAGCCGGAGGGAGGGGTGCAGA | + |
Preference number: 6 (lower is better) Translates to: EGPLRFVVERDG*LREKSRREGCR Trigger: TCTGCACCCCTCCCTCCGGCTCTTCTCCCTTAGCAACCCGTCTCTTTCCACCACAAACCTGAGTGGCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CAA 90 bp | TCCACAGAGGGGTCCAGCAGGCCCATGCTGGAGTCACTTAGCATGTaGAGTCCATCGAGGCTCAAGGGTTCGATCTGCAGCTCCTCTTCC | + |
Preference number: 6 (lower is better) Translates to: STEGSSRPMLESLSM*SPSRLKGSICSSSS Trigger: GGAAGAGGAGCTGCAGATCGAACCCTTGAGCCTCGATGGACTCAACATGCTAAGTGACTCCAGCATGGGCCTGCTGGACCCCTCTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS TCA 72 bp | GTGGCGGGTTCCACGAACATTATCGGCTTGATGAAGTaGTGGCTGGAACTCTGGCGCGCTGTTCCGCAGCTG | + |
Preference number: 6 (lower is better) Translates to: VAGSTNIIGLMK*WLELWRAVPQL Trigger: CAGCTGCGGAACAGCGCGCCAGAGTTCCAGCCATCACTTCATCAAGCCGATAATGTTCGTGGAACCCGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CAA 72 bp | GGGTCCAGCAGGCCCATGCTGGAGTCACTTAGCATGTaGAGTCCATCGAGGCTCAAGGGTTCGATCTGCAGC | + |
Preference number: 6 (lower is better) Translates to: GSSRPMLESLSM*SPSRLKGSICS Trigger: GCTGCAGATCGAACCCTTGAGCCTCGATGGACTCAACATGCTAAGTGACTCCAGCATGGGCCTGCTGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS TCA 72 bp | GGTCCAGCAGGCCCATGCTGGAGTCACTTAGCATGTTaGGTCCATCGAGGCTCAAGGGTTCGATCTGCAGCT | + |
Preference number: 6 (lower is better) Translates to: GPAGPCWSHLAC*VHRGSRVRSAA Trigger: AGCTGCAGATCGAACCCTTGAGCCTCGATGGACTCAACATGCTAAGTGACTCCAGCATGGGCCTGCTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS GCA 72 bp | AGCATGTTGAGTCCATCGAGGCTCAAGGGTTCGATCTaGAGCTCCTCTTCCAGAGGGAACGGGGTGTCCATG | + |
Preference number: 6 (lower is better) Translates to: SMLSPSRLKGSI*SSSSRGNGVSM Trigger: CATGGACACCCCGTTCCCTCTGGAAGAGGAGCTGCAGATCGAACCCTTGAGCCTCGATGGACTCAACATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CAA 90 bp | CTGTCAGGATGGTGCCTGGGAAGCTGCCACAGCTGGAATATGGGTTaGGTCTCAAGTGGAATGAGTCCTGTGGTTCTCGGTGGCTCTGCT | + |
Preference number: 6 (lower is better) Translates to: LSGWCLGSCHSWNMG*VSSGMSPVVLGGSA Trigger: AGCAGAGCCACCGAGAACCACAGGACTCATTCCACTTGAGACCAAACCCATATTCCAGCTGTGGCAGCTTCCCAGGCACCATCCTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS GCA 72 bp | ACTGGCCTCCTCCTCCATAGGGGTCCTGGGGTTTGGTaGTCAGAGCACTCGTGTGAAGAGCAGAATCAGAAT | + |
Preference number: 6 (lower is better) Translates to: TGLLLHRGPGVW*SEHSCEEQNQN Trigger: ATTCTGATTCTGCTCTTCACACGAGTGCTCTGAGCACCAAACCCCAGGACCCCTATGGAGGAGGAGGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CCA 72 bp | TCTTTCAGCGGACCCGGGAAGGCGGCTACTTCCGCATaGCCATCGTTTTCACCATCACAGAAACCCATGTAT | + |
Preference number: 6 (lower is better) Translates to: SFSGPGKAATSA*PSFSPSQKPMY Trigger: ATACATGGGTTTCTGTGATGGTGAAAACGATGGCCATGCGGAAGTAGCCGCCTTCCCGGGTCCGCTGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CAA 72 bp | TGGTGCCTGGGAAGCTGCCACAGCTGGAATATGGGTTaGGTCTCAAGTGGAATGAGTCCTGTGGTTCTCGGT | + |
Preference number: 6 (lower is better) Translates to: WCLGSCHSWNMG*VSSGMSPVVLG Trigger: ACCGAGAACCACAGGACTCATTCCACTTGAGACCAAACCCATATTCCAGCTGTGGCAGCTTCCCAGGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CAA 72 bp | GATGGAAGGGTTACTTCGAGAACTTTGGAGACCTCCTaGCTCTCCCACAGGTGTTTAGGCAGTGGCTTCGGG | + |
Preference number: 6 (lower is better) Translates to: DGRVTSRTLETS*LSHRCLGSGFG Trigger: CCCGAAGCCACTGCCTAAACACCTGTGGGAGAGCAAGGAGGTCTCCAAAGTTCTCGAAGTAACCCTTCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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CDS CCA 72 bp | CTTCTGTCAGGATGGTGCCTGGGAAGCTGCCACAGCTaGAATATGGGTTTGGTCTCAAGTGGAATGAGTCCT | + |
Preference number: 6 (lower is better) Translates to: LLSGWCLGSCHS*NMGLVSSGMSP Trigger: AGGACTCATTCCACTTGAGACCAAACCCATATTCCAGCTGTGGCAGCTTCCCAGGCACCATCCTGACAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CAA 72 bp | GAGTGTGGCTTGGATGGAAGGGTTACTTCGAGAACTTaGGAGACCTCCTTGCTCTCCCACAGGTGTTTAGGC | + |
Preference number: 6 (lower is better) Translates to: ECGLDGRVTSRT*ETSLLSHRCLG Trigger: GCCTAAACACCTGTGGGAGAGCAAGGAGGTCTCCAAAGTTCTCGAAGTAACCCTTCCATCCAAGCCACACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149176.2 |
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CDS GCA 72 bp | GTCCTGTTAAGTGCAGATGTTAGCCTGAATCCAGGATaGTTCTCTTCTTTCCAAGGAGGCTGTTGCCGTGGC | + |
Preference number: 6 (lower is better) Translates to: VLLSADVSLNPG*FSSFQGGCCRG Trigger: GCCACGGCAACAGCCTCCTTGGAAAGAAGAGAAGCATCCTGGATTCAGGCTAACATCTGCACTTAACAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS CCA 72 bp | CAGGTTGCTGTTTGTATCTTCTGTCAGGATGGTGCCTaGGAAGCTGCCACAGCTGGAATATGGGTTTGGTCT | + |
Preference number: 6 (lower is better) Translates to: QVAVCIFCQDGA*EAATAGIWVWS Trigger: AGACCAAACCCATATTCCAGCTGTGGCAGCTTCCCAGGCACCATCCTGACAGAAGATACAAACAGCAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |
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CDS GCA 72 bp | AACCTGTTAAGTGCAGATGTTAGCCTGAATCCAGGATaGTTCTCTTCTTTCCAAGGAGGCTGTTGCCGTGGC | + |
Preference number: 6 (lower is better) Translates to: NLLSADVSLNPG*FSSFQGGCCRG Trigger: GCCACGGCAACAGCCTCCTTGGAAAGAAGAGAAGCATCCTGGATTCAGGCTAACATCTGCACTTAACAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127326.2 |
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CDS GCA 72 bp | TGTTTGTATCTTCTGTCAGGATGGTGCCTGGGAAGCTaGCACAGCTGGAATATGGGTTTGGTCTCAAGTGGA | + |
Preference number: 6 (lower is better) Translates to: CLYLLSGWCLGS*HSWNMGLVSSG Trigger: TCCACTTGAGACCAAACCCATATTCCAGCTGTGGCAGCTTCCCAGGCACCATCCTGACAGAAGATACAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122255.8 |