Pregenerated sensors for CRTC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027936Ensembl transcript IDs: ENSMUST00000029545.15, ENSMUST00000184882.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTACTGGCCAGGGGGAAGGGATGAAGACTGATGGGACAGGGCCATaGAGAAGGATGGCAGTGAGGTCCCCTCACTGTAGCCGATCACTA | + |
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Preference number: 1 (lower is better) Translates to: STGQGEGMKTDGTGP*RRMAVRSPHCSRSL Trigger: TAGTGATCGGCTACAGTGAGGGGACCTCACTGCCATCCTTCTTCATGGCCCTGTCCCATCAGTCTTCATCCCTTCCCCCTGGCCAGTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTGGTGGTTGAGGACGTaGGGGTCCTGGGGGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: EGLVVPIPSGQALSPRFPWWLRT*GSWGPL Trigger: GAGTGGCCCCCAGGACCCTCACGTCCTCAACCACCA...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTGCCAGGGGGAAGGGATaGAGACTGATGGGACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VVPIPSGQALSPRFPSTPARGKG*RLMGQG Trigger: GCCCTGTCCCATCAGTCTTCATCCCTTCCCCCTGGC...AGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCCTTCCCAACAGGCTCTaGCCTCCAGACAGACGGTTT | + |
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Preference number: 2 (lower is better) Translates to: EGLVVPIPSGQALSPRFPLPNRL*PPDRRF Trigger: AAACCGTCTGTCTGGAGGTCAGAGCCTGTTGGGAAG...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTTCAAGTTCTGGTGGTTaGGGACGTGAGGGTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GLVVPIPSGQALSPRFPSSSSGG*GREGPG Trigger: CCCAGGACCCTCACGTCCTCAACCACCAGAACTTGA...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTTAGGTCCTGAGCCATaGCGGGAACAGTGGGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: EGLVVPIPSGQALSPRFPLGPEP*REQWVK Trigger: CTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAA...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTCCATGGCGGGAACAGTaGGTCAAGTTCTGGTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GLVVPIPSGQALSPRFPSPWREQ*VKFWWL Trigger: CAACCACCAGAACTTGACCCACTGTTCCCGCCATGG...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCGATGGGACAGGGCCATaGAGAAGGATGGCAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PSLLDKPSLQDFPLHLASDGTGP*RRMAVR Trigger: CCTCACTGCCATCCTTCTTCATGGCCCTGTCCCATC...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCGATGGGACAGGGCCATaGAGAAGGATGGCAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PVSMILGPEPWREQWVKFDGTGP*RRMAVR Trigger: CCTCACTGCCATCCTTCTTCATGGCCCTGTCCCATC...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTGGAAGGGATGAAGACTaGTGGGACAGGGCCATGAAG | + |
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Preference number: 2 (lower is better) Translates to: VVPIPSGQALSPRFPSTPGRDED*WDRAMK Trigger: CTTCATGGCCCTGTCCCATCAGTCTTCATCCCTTCC...AGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCCTGGGCCAGAGCATGTaGATGCCAGGAAGAGAACGG | + |
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Preference number: 2 (lower is better) Translates to: PVSMILGPEPWREQWVKFLGQSM*MPGRER Trigger: CCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAG...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCGGAAGGGATGAAGACTaGTGGGACAGGGCCATGAAG | + |
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Preference number: 2 (lower is better) Translates to: PVSMILGPEPWREQWVKFGRDED*WDRAMK Trigger: CTTCATGGCCCTGTCCCATCAGTCTTCATCCCTTCC...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCATGGGCTCTCCATGTTaGATTGCTCCAGCTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PVSMILGPEPWREQWVKFMGSPC*IAPAAG Trigger: CCCAGCAGCTGGAGCAATTCAACATGGAGAGCCCAT...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGCCAGAGCATGTGCATaGCAGGAAGAGAACGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PSGQALSPRFPSTPCFPTARACA*QEENGS Trigger: TGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGC...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGAATTGCTCCAGCTGCTaGGCCAGAGCATGTGCATGC | + |
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Preference number: 2 (lower is better) Translates to: LLDKPSLQDFPLHLASQQNCSSC*ARACAC Trigger: GCATGCACATGCTCTGGCCCAGCAGCTGGAGCAATT...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCCTCTCCATGTTGAATTaGTCCAGCTGCTGGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PVSMILGPEPWREQWVKFLSMLN*SSCWAR Trigger: TCTGGCCCAGCAGCTGGAGCAATTCAACATGGAGAG...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGGAGAGTAGTCTCTACTaGCCAGGGGGAAGGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: LLDKPSLQDFPLHLASQQESSLY*PGGRDE Trigger: TTCATCCCTTCCCCCTGGCCAGTAGAGACTACTCTC...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTGCTCTCCATGTTGAATaGCTCCAGCTGCTGGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: GLVVPIPSGQALSPRFPSALHVE*LQLLGQ Trigger: CTGGCCCAGCAGCTGGAGCAATTCAACATGGAGAGC...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR TCA 72 bp | CAGGGGGAAGGGATGAAGACTGATGGGACAGGGCCATaGAGAAGGATGGCAGTGAGGTCCCCTCACTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: QGEGMKTDGTGP*RRMAVRSPHCS Trigger: GCTACAGTGAGGGGACCTCACTGCCATCCTTCTTCATGGCCCTGTCCCATCAGTCTTCATCCCTTCCCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR TCA 72 bp | AGACTGATGGGACAGGGCCATGAAGAAGGATGGCAGTaGGGTCCCCTCACTGTAGCCGATCACTACGGAATG | + |
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Preference number: 3 (lower is better) Translates to: RLMGQGHEEGWQ*GPLTVADHYGM Trigger: CATTCCGTAGTGATCGGCTACAGTGAGGGGACCTCACTGCCATCCTTCTTCATGGCCCTGTCCCATCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACACCTGGGGGCCACTCATaGATCCCTCACTCCCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: PSGQALSPRFPSTPCFPTPGGHS*IPHSLK Trigger: TTTTAGGGAGTGAGGGATCAATGAGTGGCCCCCAGG...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | CCCCTCACTGTAGCCGATCACTACGGAATGAGTCCTCCACAGCAGGGTCAGGCAGCAAGCTCAGGGGGCTaGGGGGCACACGACGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PLTVADHYGMSPPQQGQAASSGG*GAHDGG Trigger: GCCACCGTCGTGTGCCCCTCAGCCCCCTGAGCTTGC...TGCCTGACCCTGCTGTGGAGGACTCATTCCGTAGTGATCGGCTACAGTGAGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCCCTTCTGGCGTCGGCTaGGCCCGCGGGCAAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPPSGVG*ARGQAQ Trigger: CTGAGCTTGCCCGCGGGCCCAGCCGACGCCAGAAGG...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCGCTGTTGGGACCTTCTaGCGTCGGCTGGGCCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPAVGTF*RRLGPR Trigger: CCGCGGGCCCAGCCGACGCCAGAAGGTCCCAACAGC...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCCTCCTCCTCGGCGGCTaGGCAGGACACTGGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPLLLGG*AGHWEV Trigger: CACCTCCCAGTGTCCTGCCCAGCCGCCGAGGAGGAG...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGGAGTCGCACTAAGTGACGGGTaGCCCAGGGAGGTGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LLGQSMCMPGRERVKAGVALSDG*PREVVG Trigger: GCCCACCACCTCCCTGGGCCACCCGTCACTTAGTGC...GACTCCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCGGGGTATCGGCGGAGTaGGGACACCATTCTGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPGVSAE*GHHSAG Trigger: GCCCGCAGAATGGTGTCCCCACTCCGCCGATACCCC...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTTGGTGGTTGAGGACGTaGGGGTCCTGGGGGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: GLVVPIPSGQALSPRFPSWWLRT*GSWGPL Trigger: GAGTGGCCCCCAGGACCCTCACGTCCTCAACCACCA...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
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| CDS-3UTR CCA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCTTCTGGCGTCGGCTaGGCCCGCGGGCAAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: AHPFWTSPLSKISLYTLLPSGVG*ARGQAQ Trigger: CTGAGCTTGCCCGCGGGCCCAGCCGACGCCAGAAGG...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GGGGAAGAGTCTCCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGGCTGTTGGGACCTTCTaGCGTCGGCTGGGCCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: GEESPVSMILGPEPWREQAVGTF*RRLGPR Trigger: CCGCGGGCCCAGCCGACGCCAGAAGGTCCCAACAGC...CTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGGAGACTCTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGCAAGCTCAGGGGGCTaGGGGGCACACGACGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PSGQALSPRFPSTPCFPTASSGG*GAHDGG Trigger: GCCACCGTCGTGTGCCCCTCAGCCCCCTGAGCTTGC...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCACTGTAGCCGATCACTACGGAATGAGTCCTCCACAGCAGGGTCAGGCACAGTGCCCCATAATGTaGCTGCCTGCCTGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PLTVADHYGMSPPQQGQAQCPIM*LPAWRL Trigger: CAGCCTCCAGGCAGGCAGCCACATTATGGGGCACTG...TGCCTGACCCTGCTGTGGAGGACTCATTCCGTAGTGATCGGCTACAGTGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCGGAAGTGTAGGTTGGTaGGGTCAGGTAGGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPGSVGW*GQVGSL Trigger: GAGGCTCCCTACCTGACCTCACCAACCTACACTTCC...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTCCCTGGAGCTGGGGTTaGGGACTACTTAGGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GLVVPIPSGQALSPRFPSPWSWG*GLLREA Trigger: GGCTTCCCTAAGTAGTCCTCAACCCCAGCTCCAGGG...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR GCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCGTGGGGACACCATTCTaGGGGCATCTCGTTGTACCC | + |
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Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPVGTPF*GHLVVP Trigger: GGGTACAACGAGATGCCCGCAGAATGGTGTCCCCAC...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCACTGTAGCCGATCACTACGGAATGAGTCCTCCACAGCAGGGTCAGGCACATAATGTGGCTGCCTaGCTGGAGGCTGTCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: PLTVADHYGMSPPQQGQAHNVAA*LEAVHL Trigger: CAGGTGGACAGCCTCCAGGCAGGCAGCCACATTATG...TGCCTGACCCTGCTGTGGAGGACTCATTCCGTAGTGATCGGCTACAGTGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCCGTTCCACCAACCCATaGTGCCGAGTGCTCCGAGAT | + |
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Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPRSTNP*CRVLRD Trigger: ATCTCGGAGCACTCGGCACCATGGGTTGGTGGAACG...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGCTCCTCCTCGGCGGCTaGGCAGGACACTGGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQLLLGG*AGHWEV Trigger: CACCTCCCAGTGTCCTGCCCAGCCGCCGAGGAGGAG...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCCTGGTACATCATAGCTaGGGCCCAAGCCCAGACCTC | + |
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Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPLVHHS*GPSPDL Trigger: GAGGTCTGGGCTTGGGCCCCAGCTATGATGTACCAG...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTGCACTAAGTGACGGGTaGCCCAGGGAGGTGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VVPIPSGQALSPRFPSTPALSDG*PREVVG Trigger: GCCCACCACCTCCCTGGGCCACCCGTCACTTAGTGC...AGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCGTTGCCCATGTCCACTaGACCCAGGTGGGTACAGTG | + |
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Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPVAHVH*TQVGTV Trigger: CACTGTACCCACCTGGGTCCAGTGGACATGGGCAAC...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | GTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTGCAGGCAGTGATGGGTaGCTATGGGAGCCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VVPIPSGQALSPRFPSTPAGSDG*LWEPWS Trigger: GCTCCAGGGCTCCCATAGTCACCCATCACTGCCTGC...AGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTGCAGGCAGTGATGGGTaGCTATGGGAGCCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: AHPFWTSPLSKISLYTLLAGSDG*LWEPWS Trigger: GCTCCAGGGCTCCCATAGTCACCCATCACTGCCTGC...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCGGAGGAGGCAGGCAGTaGTGGGTGACTATGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PSLLDKPSLQDFPLHLASGGGRQ*WVTMGA Trigger: GGCTCCCATAGTCACCCATCACTGCCTGCCTCCTCC...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | GGGGAAGAGTCTCCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGGGAGGAGGCAGGCAGTaGTGGGTGACTATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GEESPVSMILGPEPWREQGGGRQ*WVTMGA Trigger: GGCTCCCATAGTCACCCATCACTGCCTGCCTCCTCC...CTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGGAGACTCTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTCATAATGTGGCTGCCTaGCTGGAGGCTGTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVPIPSGQALSPRFPSHNVAA*LEAVHL Trigger: CAGGTGGACAGCCTCCAGGCAGGCAGCCACATTATG...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCGGGGCTATATGGGTATaGGGGCAATCGCTGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPGAIWV*GQSLVS Trigger: ACTGACCAGCGATTGCCCCCATACCCATATAGCCCC...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCGAATCCAAAGGTGAGTaGAGGGGGCTCTGGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPESKGE*RGLWNS Trigger: TGAGTTCCAGAGCCCCCTTCACTCACCTTTGGATTC...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
||
| CDS-3UTR TCA 90 bp | GTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTCCCTGGAGCTGGGGTTaGGGACTACTTAGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVPIPSGQALSPRFPSTPPWSWG*GLLREA Trigger: GGCTTCCCTAAGTAGTCCTCAACCCCAGCTCCAGGG...AGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGGAGTCGGAAGACAAGGTGGGTaGCATTGTTGGCGAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGQSMCMPGRERVKAGVGRQGG*HCWRKL Trigger: CAGTTTTCGCCAACAATGTCACCCACCTTGTCTTCC...GACTCCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTTGCACTAAGCAGGCCTaGGAGGGCAACTGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLVVPIPSGQALSPRFPSCTKQA*EGNCCR Trigger: TCTACAGCAGTTGCCCTCTCAGGCCTGCTTAGTGCA...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTTCCACCAACCCATGGTaGCGAGTGCTCCGAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLVVPIPSGQALSPRFPSSTNPW*RVLRDE Trigger: TTCATCTCGGAGCACTCGGCACCATGGGTTGGTGGA...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTGGCAGTCTAAACAACTaGCCCTTCTCAGCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVPIPSGQALSPRFPSGSLNN*PFSAGR Trigger: CCTCCCAGCTGAGAAGGGGCAGTTGTTTAGACTGCC...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTTTAGGTCCTGAGCCATaGCGGGAACAGTGGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVPIPSGQALSPRFPSLGPEP*REQWVK Trigger: CTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAA...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
||
| CDS-3UTR TCA 90 bp | GCAGGGTCAGGCAGCAGGGCACAGGGGTCACTCAGCATAGTTAGTCCTTCCAGGGAGATGGAAAGATGTTaGTTCCAGGGACTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSGSRAQGSLSIVSPSREMERC*FQGLHR Trigger: CCTGTGAAGTCCCTGGAATCAACATCTTTCCATCTC...CCTGGAAGGACTAACTATGCTGAGTGACCCCTGTGCCCTGCTGCCTGACCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCAGGGAACGCCCTGAGTaGTGGAAGACAAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLDKPSLQDFPLHLASRERPE*WKTRWV Trigger: CACCCACCTTGTCTTCCATCACTCAGGGCGTTCCCT...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGGAGTCCAAGATTCCCCAAGCTaGAGTCATTTATTGGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGQSMCMPGRERVKAGVQDSPS*SHLLGG Trigger: ACCGCCCAATAAATGACTTCAGCTTGGGGAATCTTG...GACTCCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTCCCAGGTGGGTACAGTaGCCCATAATGTGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPIPSGQALSPRFPSTPPRWVQ*PIMWLP Trigger: AGGCAGCCACATTATGGGGCACTGTACCCACCTGGG...AGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCGTTCCACCAACCCATaGTGCCGAGTGCTCCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AHPFWTSPLSKISLYTLLRSTNP*CRVLRD Trigger: ATCTCGGAGCACTCGGCACCATGGGTTGGTGGAACG...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCGGCACATTAGCAGGCTaGTCAGGAGATGGAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPGTLAG*SGDGKM Trigger: CATCTTTCCATCTCCTGACCAGCCTGCTAATGTGCC...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAGGAGTAGAAGCTaGGTAAGGGGGAGCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHPFWTSPLSKISLYTLLPRSRS*VRGSTQ Trigger: CTGAGTGCTCCCCCTTACCCAGCTTCTACTCCTGGG...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCCCAGGAGTAGAAGCTaGGTAAGGGGGAGCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLDKPSLQDFPLHLASPRSRS*VRGSTQ Trigger: CTGAGTGCTCCCCCTTACCCAGCTTCTACTCCTGGG...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACACAGTGCCCCATAATGTaGCTGCCTGCCTGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSGQALSPRFPSTPCFPTQCPIM*LPAWRL Trigger: CAGCCTCCAGGCAGGCAGCCACATTATGGGGCACTG...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGGAAGTGTAGGTTGGTaGGGTCAGGTAGGGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSGQALSPRFPSTPCFPTGSVGW*GQVGSL Trigger: GAGGCTCCCTACCTGACCTCACCAACCTACACTTCC...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGAGGGAACGCCCTGAGTaGTGGAAGACAAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQRERPE*WKTRWV Trigger: CACCCACCTTGTCTTCCATCACTCAGGGCGTTCCCT...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCTGCACTAAGCAGGCCTaGGAGGGCAACTGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSLLDKPSLQDFPLHLASCTKQA*EGNCCR Trigger: TCTACAGCAGTTGCCCTCTCAGGCCTGCTTAGTGCA...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGCCGATCACTACGGAATaGGTCCTCCACAGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQPITTE*VLHSRV Trigger: GACCCTGCTGTGGAGGACTCATTCCGTAGTGATCGG...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
||
| CDS-3UTR GCA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTTCCACCAACCCATGGTaGCGAGTGCTCCGAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AHPFWTSPLSKISLYTLLSTNPW*RVLRDE Trigger: TTCATCTCGGAGCACTCGGCACCATGGGTTGGTGGA...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGGAGTCCAAGGTTTCAGCAGATaGTTGTCATCTACCACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGQSMCMPGRERVKAGVQGFSR*LSSTTF Trigger: GAACGTGGTAGATGACAAGCATCTGCTGAAACCTTG...GACTCCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGCCCAGGTGGGTACAGTaGCCCATAATGTGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQPRWVQ*PIMWLP Trigger: AGGCAGCCACATTATGGGGCACTGTACCCACCTGGG...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTGGGCCTGTAACCGTGTaGAGCCGATGTCCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VVPIPSGQALSPRFPSTPGPVTV*SRCPSS Trigger: TGATGATGGACATCGGCTCCACACGGTTACAGGCCC...AGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCAGGCTGGTCAGGAGATaGAAAGATGTTGATTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGLVVPIPSGQALSPRFPRLVRR*KDVDSR Trigger: CCTGGAATCAACATCTTTCCATCTCCTGACCAGCCT...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCCTGGTACATCATAGCTaGGGCCCAAGCCCAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVSMILGPEPWREQWVKFLVHHS*GPSPDL Trigger: GAGGTCTGGGCTTGGGCCCCAGCTATGATGTACCAG...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGGTTGCCCATGTCCACTaGACCCAGGTGGGTACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQVAHVH*TQVGTV Trigger: CACTGTACCCACCTGGGTCCAGTGGACATGGGCAAC...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCCATGGCGGGAACAGTaGGTCAAGTTCTGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLDKPSLQDFPLHLASPWREQ*VKFWWL Trigger: CAACCACCAGAACTTGACCCACTGTTCCCGCCATGG...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTGAGATGGAAAGATGTTaGTTCCAGGGACTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVPIPSGQALSPRFPSEMERC*FQGLHR Trigger: CCTGTGAAGTCCCTGGAATCAACATCTTTCCATCTC...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR GCA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTACCCATGGTGCCGAGTaGTCCGAGATGAATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHPFWTSPLSKISLYTLLTHGAE*SEMNPK Trigger: CTTTGGATTCATCTCGGAGCACTCGGCACCATGGGT...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTAATTGGTGGTACTGTTaGCCCCACTCAGGCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVPIPSGQALSPRFPSTPNWWYC*PHSGWD Trigger: ATCCCAGCCTGAGTGGGGGCAACAGTACCACCAATT...AGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGGCCAGTCGCAGTTTTTaGGCCTGTAACCGTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQASRSF*ACNRVE Trigger: CTCCACACGGTTACAGGCCCAAAAACTGCGACTGGC...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGGGGCTATATGGGTATaGGGGCAATCGCTGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSGQALSPRFPSTPCFPTGAIWV*GQSLVS Trigger: ACTGACCAGCGATTGCCCCCATACCCATATAGCCCC...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTTTTGGGGTGGGTGGATaGGTGGGTATAACTAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVVPIPSGQALSPRFPSFGVGG*VGITRL Trigger: AAGTCTAGTTATACCCACCCATCCACCCACCCCAAA...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCAGGTCGAGAGGAAGATaGGGACAGCTTCTTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLDKPSLQDFPLHLASRSRGR*GQLLSI Trigger: GATGCTAAGAAGCTGTCCTCATCTTCCTCTCGACCT...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAAGAGTCTCCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGAGGTCGAGAGGAAGATaGGGACAGCTTCTTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GEESPVSMILGPEPWREQRSRGR*GQLLSI Trigger: GATGCTAAGAAGCTGTCCTCATCTTCCTCTCGACCT...CTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGGAGACTCTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCGGAAGACAAGGTGGGTaGCATTGTTGGCGAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLDKPSLQDFPLHLASGRQGG*HCWRKL Trigger: CAGTTTTCGCCAACAATGTCACCCACCTTGTCTTCC...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCATGGGCTCTCCATGTTaGATTGCTCCAGATTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLLDKPSLQDFPLHLASMGSPC*IAPDSP Trigger: TGGGGAATCTGGAGCAATTCAACATGGAGAGCCCAT...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
||
| CDS-3UTR TCA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTTATGATATTAGGTCCTaGGCCATGGCGGGAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHPFWTSPLSKISLYTLLYDIRS*AMAGTV Trigger: CACTGTTCCCGCCATGGCTCAGGACCTAATATCATA...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
||
| CDS-3UTR GCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCACCCATGGTGCCGAGTaGTCCGAGATGAATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVSMILGPEPWREQWVKFTHGAE*SEMNPK Trigger: CTTTGGATTCATCTCGGAGCACTCGGCACCATGGGT...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGAATTGGTGGTACTGTTaGCCCCACTCAGGCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQNWWYC*PHSGWD Trigger: ATCCCAGCCTGAGTGGGGGCAACAGTACCACCAATT...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAACTCAGGACAGGAGATaGAGTGGACGAAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSGQALSPRFPSTPCFPTTQDRR*SGRRGR Trigger: TCTTCCTCTTCGTCCACTTCATCTCCTGTCCTGAGT...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCACTCAGGACAGGAGATaGAGTGGACGAAGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PVSMILGPEPWREQWVKFTQDRR*SGRRGR Trigger: TCTTCCTCTTCGTCCACTTCATCTCCTGTCCTGAGT...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS-3UTR TCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGCCAGATTCCCCAAGCTaGAGTCATTTATTGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQPDSPS*SHLLGG Trigger: ACCGCCCAATAAATGACTTCAGCTTGGGGAATCTGG...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
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| CDS-3UTR CCA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTAGGCTGGTCAGGAGATaGAAAGATGTTGATTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AHPFWTSPLSKISLYTLLRLVRR*KDVDSR Trigger: CCTGGAATCAACATCTTTCCATCTCCTGACCAGCCT...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCGGCACATTAGCAGGCTaGTCAGGAGATGGAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: PVSMILGPEPWREQWVKFGTLAG*SGDGKM Trigger: CATCTTTCCATCTCCTGACCAGCCTGCTAATGTGCC...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | CCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCTTTGGGGTGGGTGGATaGGTGGGTATAACTAGACTT | + |
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Preference number: 4 (lower is better) Translates to: PSLLDKPSLQDFPLHLASFGVGG*VGITRL Trigger: AAGTCTAGTTATACCCACCCATCCACCCACCCCAAA...GGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGATAGGCAGGGCTATATaGAGAACTGTCAATGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQIGRAI*RTVNVA Trigger: CGCCACATTGACAGTTCTCCATATAGCCCTGCCTAT...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAATAGGCAGGGCTATATaGAGAACTGTCAATGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PSGQALSPRFPSTPCFPTIGRAI*RTVNVA Trigger: CGCCACATTGACAGTTCTCCATATAGCCCTGCCTAT...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR GCA 90 bp | CTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGCAAGGTTTCAGCAGATaGTTGTCATCTACCACGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLDKPSLQDFPLHLASQQQGFSR*LSSTTF Trigger: GAACGTGGTAGATGACAAGCATCTGCTGAAACCTTG...CTGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTAAATGGGTCATAGTATaGGTCAAATTGGTGGTACTG | + |
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Preference number: 4 (lower is better) Translates to: AHPFWTSPLSKISLYTLLKWVIV*VKLVVL Trigger: CAGTACCACCAATTTGACCCATACTATGACCCATTT...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGTGGGTCAAGTTCAAATGGGTCATAGTATaGGTCAAATTGGTGGTACTG | + |
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Preference number: 4 (lower is better) Translates to: PVSMILGPEPWREQWVKFKWVIV*VKLVVL Trigger: CAGTACCACCAATTTGACCCATACTATGACCCATTT...GAACTTGACCCACTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS CCA 90 bp | TATTGGGCGGTGGTAAGGCTGTTGCCCATGTCCACTGGACCCAGGTaGGTACAGTGCCCCATAATGTGGCTGCCTGCCTGGAGGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: YWAVVRLLPMSTGPR*VQCPIMWLPAWRLS Trigger: GGACAGCCTCCAGGCAGGCAGCCACATTATGGGGCACTGTACCCACCTGGGTCCAGTGGACATGGGCAACAGCCTTACCACCGCCCAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGGGCCAGAGCATGTGCATGCCAGGAAGAGAACGGGTCAAGGCAGGAGTCTTCTCAGCTGGGAGGTaGCCCCAGGGCATCATCCTT | + |
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Preference number: 5 (lower is better) Translates to: LLGQSMCMPGRERVKAGVFSAGR*PQGIIL Trigger: AAGGATGATGCCCTGGGGCAACCTCCCAGCTGAGAA...GACTCCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS CCA 90 bp | CCTGTTAAGTGCAGACGGCAGTCTAAACAACTGCCCCTTCTCAGCTaGGAGGTTGCCCCAGGGCATCATCCTTCGCCAGCCAGACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PVKCRRQSKQLPLLS*EVAPGHHPSPARLW Trigger: CCAGAGTCTGGCTGGCGAAGGATGATGCCCTGGGGCAACCTCCCAGCTGAGAAGGGGCAGTTGTTTAGACTGCCGTCTGCACTTAACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTTCTCAGCTGGGAGGTaGCCCCAGGGCATCATCCTT | + |
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Preference number: 5 (lower is better) Translates to: EGLVVPIPSGQALSPRFPFSAGR*PQGIIL Trigger: AAGGATGATGCCCTGGGGCAACCTCCCAGCTGAGAA...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS CCA 90 bp | AGGGCTATATGGAGAACTGTCAATGTGGCGGGGGTATCGGCGGAGTaGGGACACCATTCTGCGGGCATCTCGTTGTACCCGTTCCACCAA | + |
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Preference number: 5 (lower is better) Translates to: RAIWRTVNVAGVSAE*GHHSAGISLYPFHQ Trigger: TTGGTGGAACGGGTACAACGAGATGCCCGCAGAATGGTGTCCCCACTCCGCCGATACCCCCGCCACATTGACAGTTCTCCATATAGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCAAATTGGTGGTACTGTaGCCCCCACTCAGGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: EGLVVPIPSGQALSPRFPKLVVL*PPLRLG Trigger: TCCCAGCCTGAGTGGGGGCAACAGTACCACCAATTT...GGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGGTAGTGCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTCCTGGGGGCCACTCATaGATCCCTCACTCCCTAAAA | + |
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Preference number: 5 (lower is better) Translates to: GLVVPIPSGQALSPRFPSPGGHS*IPHSLK Trigger: TTTTAGGGAGTGAGGGATCAATGAGTGGCCCCCAGG...AGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
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| CDS-3UTR CAA 90 bp | GGGGAAGAGTCTCCTGTGAGTATGATATTAGGTCCTGAGCCATGGCGGGAACAGAAATTGGTGGTACTGTaGCCCCCACTCAGGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: GEESPVSMILGPEPWREQKLVVL*PPLRLG Trigger: TCCCAGCCTGAGTGGGGGCAACAGTACCACCAATTT...CTGTTCCCGCCATGGCTCAGGACCTAATATCATACTCACAGGAGACTCTTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS CCA 90 bp | CTCCATGTTGAATTGCTCCAGATTCCCCAAGCTGAAGTCATTTATTaGGCGGTGGTAAGGCTGTTGCCCATGTCCACTGGACCCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LHVELLQIPQAEVIY*AVVRLLPMSTGPRW Trigger: CCACCTGGGTCCAGTGGACATGGGCAACAGCCTTACCACCGCCCAATAAATGACTTCAGCTTGGGGAATCTGGAGCAATTCAACATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
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| CDS-3UTR CAA 90 bp | GCCCATCCCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTATCTTCTCACTAAACTaGCGTGGATTGGACGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: AHPFWTSPLSKISLYTLLIFSLN*RGLDAE Trigger: CTCAGCGTCCAATCCACGCAAGTTTAGTGAGAAGAT...AAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
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| CDS-3UTR CAA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACACATAATGGGAGCTCCTaGTATAAGCCAGTCGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PSGQALSPRFPSTPCFPTHNGSS*YKPVAV Trigger: AACTGCGACTGGCTTATACAAGGAGCTCCCATTATG...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
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| CDS-3UTR CAA 90 bp | CCTTCTGGACAAGCCCTCTCTCCAAGATTTCCCTCTACACCTTGCTTCCCAACAGGAGATGGAAAGATGTaGATTCCAGGGACTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: PSGQALSPRFPSTPCFPTGDGKM*IPGTSQ Trigger: CTGTGAAGTCCCTGGAATCAACATCTTTCCATCTCC...TGTTGGGAAGCAAGGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS GCA 72 bp | CTGTTGCCCATGTCCACTGGACCCAGGTGGGTACAGTaGCCCATAATGTGGCTGCCTGCCTGGAGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLPMSTGPRWVQ*PIMWLPAWRLS Trigger: GGACAGCCTCCAGGCAGGCAGCCACATTATGGGGCACTGTACCCACCTGGGTCCAGTGGACATGGGCAACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS CCA 72 bp | TGGAGAACTGTCAATGTGGCGGGGGTATCGGCGGAGTaGGGACACCATTCTGCGGGCATCTCGTTGTACCCG | + |
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Preference number: 6 (lower is better) Translates to: WRTVNVAGVSAE*GHHSAGISLYP Trigger: CGGGTACAACGAGATGCCCGCAGAATGGTGTCCCCACTCCGCCGATACCCCCGCCACATTGACAGTTCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS CCA 72 bp | TGCAGACGGCAGTCTAAACAACTGCCCCTTCTCAGCTaGGAGGTTGCCCCAGGGCATCATCCTTCGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CRRQSKQLPLLS*EVAPGHHPSPA Trigger: GGCTGGCGAAGGATGATGCCCTGGGGCAACCTCCCAGCTGAGAAGGGGCAGTTGTTTAGACTGCCGTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS CCA 72 bp | CTGCGGGCATCTCGTTGTACCCGTTCCACCAACCCATaGTGCCGAGTGCTCCGAGATGAATCCAAAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LRASRCTRSTNP*CRVLRDESKGE Trigger: CTCACCTTTGGATTCATCTCGGAGCACTCGGCACCATGGGTTGGTGGAACGGGTACAACGAGATGCCCGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS CCA 72 bp | TTATTGGGCGGTGGTAAGGCTGTTGCCCATGTCCACTaGACCCAGGTGGGTACAGTGCCCCATAATGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLGGGKAVAHVH*TQVGTVPHNVA Trigger: AGCCACATTATGGGGCACTGTACCCACCTGGGTCCAGTGGACATGGGCAACAGCCTTACCACCGCCCAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029545.15 ENSMUST00000184882.2 |
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| CDS CAA 90 bp | CAGATTCCCCAAGCTGAAGTCATTTATTGGGCGGTGGTAAGGCTGTaGCCCATGTCCACTGGACCCAGGTGGGTACAGTGCCCCATAATG | + |
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Preference number: 6 (lower is better) Translates to: QIPQAEVIYWAVVRL*PMSTGPRWVQCPIM Trigger: CATTATGGGGCACTGTACCCACCTGGGTCCAGTGGACATGGGCAACAGCCTTACCACCGCCCAATAAATGACTTCAGCTTGGGGAATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
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| CDS CAA 90 bp | AAGATTCCCCAAGCTGAAGTCATTTATTGGGCGGTGGTAAGGCTGTaGCCCATGTCCACTGGACCCAGGTGGGTACAGTGCCCCATAATG | + |
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Preference number: 6 (lower is better) Translates to: KIPQAEVIYWAVVRL*PMSTGPRWVQCPIM Trigger: CATTATGGGGCACTGTACCCACCTGGGTCCAGTGGACATGGGCAACAGCCTTACCACCGCCCAATAAATGACTTCAGCTTGGGGAATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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| CDS CCA 72 bp | GAATTGCTCCAGATTCCCCAAGCTGAAGTCATTTATTaGGCGGTGGTAAGGCTGTTGCCCATGTCCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: ELLQIPQAEVIY*AVVRLLPMSTG Trigger: TCCAGTGGACATGGGCAACAGCCTTACCACCGCCCAATAAATGACTTCAGCTTGGGGAATCTGGAGCAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029545.15 |
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| CDS CCA 72 bp | TCAAAGAGCAAGATTCCCCAAGCTGAAGTCATTTATTaGGCGGTGGTAAGGCTGTTGCCCATGTCCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: SKSKIPQAEVIY*AVVRLLPMSTG Trigger: TCCAGTGGACATGGGCAACAGCCTTACCACCGCCCAATAAATGACTTCAGCTTGGGGAATCTTGCTCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184882.2 |
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