Pregenerated sensors for CRTAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032431Ensembl transcript IDs: ENSMUST00000084881.5
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCAGACCACAGAAGACTGTCTTTCTGAACATGGGGGAGACACATaGGATCAGAGGGGAGACGAACGTGACTTTGAGGAGGACAGACTA | + |
|
Preference number: 1 (lower is better) Translates to: KQTTEDCLSEHGGDT*DQRGDERDFEEDRL Trigger: TAGTCTGTCCTCCTCAAAGTCACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGTCTTCTGTGGTCTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGACAACAACCCAGGCACTTaGAGAAAGAGGAACTCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CLSEHGGDTWDQRGDERDNNPGT*RKRNSE Trigger: TTCCGAGTTCCTCTTTCTTCAAGTGCCTGGGTTGTT...GTCACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGACAAGAAGAAAAGGCTGTaGGGTATCAACAACCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: CLSEHGGDTWDQRGDERDKKKRL*GINNPG Trigger: GCCTGGGTTGTTGATACCTCACAGCCTTTTCTTCTT...GTCACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| 3UTR-3UTR CCA 90 bp | CCACAGAAGACTGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGCTTGGTAGGGAGAGATaGTGGCTTCCTTCTTACTTT | + |
|
Preference number: 2 (lower is better) Translates to: PQKTVFLNMGETHGIRGELGRER*WLPSYF Trigger: AAAGTAAGAAGGAAGCCACCATCTCTCCCTACCAAG...CTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGTCTTCTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAGGAGGACAGACTAGATGACGGGAACACATGTGTGAAGGGAAAGACAGGCGGTAGGGAGAGATGGTaGCTTCCTTCTTACTTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: FEEDRLDDGNTCVKGKTGGRERW*LPSYFK Trigger: CTTAAAGTAAGAAGGAAGCCACCATCTCTCCCTACC...GCCTGTCTTTCCCTTCACACATGTGTTCCCGTCATCTAGTCTGTCCTCCTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| 3UTR CCA 72 bp | CAAGGGGAAGTCAGGCTTGACCTTGGTAGGGAGAGATaGTGGCTTCCTTCTTACTTTAAGAAGAAAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QGEVRLDLGRER*WLPSYFKKKRL Trigger: CAGCCTTTTCTTCTTAAAGTAAGAAGGAAGCCACCATCTCTCCCTACCAAGGTCAAGCCTGACTTCCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR GCA 90 bp | CCACAGAAGACTGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGCAGCGCTTGAGGCACTaGGCGCGGCGCAGCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQKTVFLNMGETHGIRGEQRLRH*ARRSTL Trigger: CAGCGTGCTGCGCCGCGCGCAGTGCCTCAAGCGCTG...CTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGTCTTCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR GCA 90 bp | ACTGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGACTGAGCGGCTGGGCTaGGACTGGCGGAAGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVFLNMGETHGIRGETNVTERLG*DWRKAG Trigger: GCCCGCCTTCCGCCAGTCGCAGCCCAGCCGCTCAGT...CACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR GCA 90 bp | CCACAGAAGACTGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGCGCGGCGCAGCACGCTaGCGAAGAGGCGTAGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PQKTVFLNMGETHGIRGERGAAR*RRGVVR Trigger: CCGAACTACGCCTCTTCGGCAGCGTGCTGCGCCGCG...CTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGTCTTCTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CCA 90 bp | TCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGACTTTGAGCCAGCACTGAGCGGCTaGGCTGCGACTGGCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEHGGDTWDQRGDERDFEPALSG*AATGGR Trigger: CCTTCCGCCAGTCGCAGCCCAGCCGCTCAGTGCTGG...CTCAAAGTCACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR TCA 90 bp | TTTGAGGAGGACAGACTAGATGACGGGAACACATGTGTGAAGGGAAAGACAGGCCCTGCTTGCAGCGCTTaGGGCACTGCGCGCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FEEDRLDDGNTCVKGKTGPACSA*GTARGA Trigger: TGCGCCGCGCGCAGTGCCTCAAGCGCTGCAAGCAGG...GCCTGTCTTTCCCTTCACACATGTGTTCCCGTCATCTAGTCTGTCCTCCTCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR GCA 90 bp | AAGCAGACCACAGAAGACTGTCTTTCTGAACATGGGGGAGACACATGGGATCAGCTGGCGTGGCCGCGCTaGAGTTGCGGTGGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQTTEDCLSEHGGDTWDQLAWPR*SCGGRR Trigger: CCTTCTGCCACCGCAACTGCAGCGCGGCCACGCCAG...CTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGTCTTCTGTGGTCTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR GCA 90 bp | AAGCAGACCACAGAAGACTGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAAGGCGGGCAGGCCCTaGTTGCAGCGCTTGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQTTEDCLSEHGGDTWDQKAGRP*LQRLRH Trigger: GTGCCTCAAGCGCTGCAAGCAGGGCCTGCCCGCCTT...CTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGTCTTCTGTGGTCTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR TCA 90 bp | GATGACGGGAACACATGTGTGAAGGGAAAGACAGGCATGAAGACGTGTAACCATAAAGTCCGCCAGCACTaGGCGGCTGGGCTGCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: DDGNTCVKGKTGMKTCNHKVRQH*AAGLRL Trigger: CAGTCGCAGCCCAGCCGCTCAGTGCTGGCGGACTTT...ATGGTTACACGTCTTCATGCCTGTCTTTCCCTTCACACATGTGTTCCCGTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR TCA 90 bp | TCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGACTTTGAGACTCGTAGAAGGCCTTaGGGAAGTCGGGAAGCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SEHGGDTWDQRGDERDFETRRRP*GSREAR Trigger: TCGCGCTTCCCGACTTCCTCAAGGCCTTCTACGAGT...CTCAAAGTCACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR GCA 90 bp | GATGACGGGAACACATGTGTGAAGGGAAAGACAGGCATGAAGACGTGTAACCATCGTCCCGCGGGAAGCTaGGGAAGCTGTAGCGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DDGNTCVKGKTGMKTCNHRPAGS*GSCSAR Trigger: ACGAGCGCTACAGCTTCCGCAGCTTCCCGCGGGACG...ATGGTTACACGTCTTCATGCCTGTCTTTCCCTTCACACATGTGTTCCCGTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR GCA 90 bp | TTGACCTTGGTAGGGAGAGATGGTGGCTTCCTTCTTACTTTAAGAAGAAAAGGCTCGCGCAGCAGACGGTaGAGCCGCAGGCTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLVGRDGGFLLTLRRKGSRSRR*SRRLTS Trigger: GGAGGTGAGCCTGCGGCTGCACCGTCTGCTGCGCGA...GCCTTTTCTTCTTAAAGTAAGAAGGAAGCCACCATCTCTCCCTACCAAGGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR TCA 90 bp | TCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGACTTTGAGCCAGGTTCTGTTGCATaGCCCTGTCACTCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SEHGGDTWDQRGDERDFEPGSVA*PCHSGQ Trigger: TTGACCAGAGTGACAGGGTCATGCAACAGAACCTGG...CTCAAAGTCACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR GCA 90 bp | TTGACCTTGGTAGGGAGAGATGGTGGCTTCCTTCTTACTTTAAGAAGAAAAGGCACGCTCTCGGCCCAGTaGTCGCCGCTGTACTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTLVGRDGGFLLTLRRKGTLSAQ*SPLYWS Trigger: CGACCAGTACAGCGGCGAGCACTGGGCCGAGAGCGT...GCCTTTTCTTCTTAAAGTAAGAAGGAAGCCACCATCTCTCCCTACCAAGGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGGCTCCATGTCGGAAATaGACGTTCTCCAGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVFLNMGETHGIRGETNVAPCRK*TFSSSP Trigger: GGGAGAACTGGAGAACGTCCATTTCCGACATGGAGC...CACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CCA 90 bp | GATGACGGGAACACATGTGTGAAGGGAAAGACAGGCATGAAGACGTGTAACCATGCTTCGGGTCTGGGCTaGAAGTGCTCATCCGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DDGNTCVKGKTGMKTCNHASGLG*KCSSER Trigger: CCTCTCGGATGAGCACTTCCAGCCCAGACCCGAAGC...ATGGTTACACGTCTTCATGCCTGTCTTTCCCTTCACACATGTGTTCCCGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR TCA 90 bp | TCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGACTTTGAGGTCACATTAAAGAACTaGACTGCTTCGGGTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEHGGDTWDQRGDERDFEVTLKN*TASGLG Trigger: GCCCAGACCCGAAGCAGTTCAGTTCTTTAATGTGAC...CTCAAAGTCACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR GCA 90 bp | TTGACCTTGGTAGGGAGAGATGGTGGCTTCCTTCTTACTTTAAGAAGAAAAGGCGGTCTGGGCTGGAAGTaGTCATCCGAGAGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLVGRDGGFLLTLRRKGGLGWK*SSERPH Trigger: GTGGGGCCTCTCGGATGAGCACTTCCAGCCCAGACC...GCCTTTTCTTCTTAAAGTAAGAAGGAAGCCACCATCTCTCCCTACCAAGGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CCA 90 bp | GACGGGAACACATGTGTGAAGGGAAAGACAGGCATGAAGACGTGTAACCATGAAGAACTGCTTCGGGTCTaGGCTGGAAGTGCTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: DGNTCVKGKTGMKTCNHEELLRV*AGSAHP Trigger: CGGATGAGCACTTCCAGCCCAGACCCGAAGCAGTTC...TTCATGGTTACACGTCTTCATGCCTGTCTTTCCCTTCACACATGTGTTCCCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGAGGACAGACTAGATGACGGGAACACATGTGTGAAGGGAAAGACAGGCATAGCCTCCTATGACTaGGGTGAGGGTCTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FEEDRLDDGNTCVKGKTGIASYD*GEGLLT Trigger: TGTGAGGAGACCCTCACCCCAGTCATAGGAGGCTAT...GCCTGTCTTTCCCTTCACACATGTGTTCCCGTCATCTAGTCTGTCCTCCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGGTAAATAGTGGTACATaGTCGCCACAAATTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVFLNMGETHGIRGETNVVNSGT*SPQISP Trigger: TGGAGAAATTTGTGGCGACCATGTACCACTATTTAC...CACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CCA 90 bp | GACTTTGAGGAGGACAGACTAGATGACGGGAACACATGTGTGAAGGGAAAGACATCGTACAGTTCCTTCTaGAGCGTCGTCACATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DFEEDRLDDGNTCVKGKTSYSSF*SVVTLK Trigger: CTTTAATGTGACGACGCTCCAGAAGGAACTGTACGA...TGTCTTTCCCTTCACACATGTGTTCCCGTCATCTAGTCTGTCCTCCTCAAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS GCA 90 bp | AGCACTGAGCGGCTGGGCTGCGACTGGCGGAAGGCGGGCAGGCCCTaGTTGCAGCGCTTGAGGCACTGCGCGCGGCGCAGCACGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: STERLGCDWRKAGRP*LQRLRHCARRSTLP Trigger: CGGCAGCGTGCTGCGCCGCGCGCAGTGCCTCAAGCGCTGCAAGCAGGGCCTGCCCGCCTTCCGCCAGTCGCAGCCCAGCCGCTCAGTGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS CCA 90 bp | ACTTGTAGGGCTCGCGCTGCTGAAAGTCCGCCAGCACTGAGCGGCTaGGCTGCGACTGGCGGAAGGCGGGCAGGCCCTGCTTGCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: TCRARAAESPPALSG*AATGGRRAGPACSA Trigger: AGCGCTGCAAGCAGGGCCTGCCCGCCTTCCGCCAGTCGCAGCCCAGCCGCTCAGTGCTGGCGGACTTTCAGCAGCGCGAGCCCTACAAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS TCA 90 bp | CTGCAGAAACTTGTAGGGCTCGCGCTGCTGAAAGTCCGCCAGCACTaGGCGGCTGGGCTGCGACTGGCGGAAGGCGGGCAGGCCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LQKLVGLALLKVRQH*AAGLRLAEGGQALL Trigger: AAGCAGGGCCTGCCCGCCTTCCGCCAGTCGCAGCCCAGCCGCTCAGTGCTGGCGGACTTTCAGCAGCGCGAGCCCTACAAGTTTCTGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS TCA 90 bp | TCTCCCGCGACCCCTCGCAGGCAGCCAGGCACTCGTAGAAGGCCTTaGGGAAGTCGGGAAGCGCGAGCTCCATGTCGGAAATGGACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPATPRRQPGTRRRP*GSREARAPCRKWTF Trigger: GAACGTCCATTTCCGACATGGAGCTCGCGCTTCCCGACTTCCTCAAGGCCTTCTACGAGTGCCTGGCTGCCTGCGAGGGGTCGCGGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CAA 90 bp | ACTGTCTTTCTGAACATGGGGGAGACACATGGGATCAGAGGGGAGACGAACGTGGCGGGCAGGCCCTGCTaGCAGCGCTTGAGGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: TVFLNMGETHGIRGETNVAGRPC*QRLRHC Trigger: GCAGTGCCTCAAGCGCTGCAAGCAGGGCCTGCCCGC...CACGTTCGTCTCCCCTCTGATCCCATGTGTCTCCCCCATGTTCAGAAAGACAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CAA 90 bp | GACGGGAACACATGTGTGAAGGGAAAGACAGGCATGAAGACGTGTAACCATGAACCCTGCTTGCAGCGCTaGAGGCACTGCGCGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DGNTCVKGKTGMKTCNHEPCLQR*RHCARR Trigger: GCGCCGCGCGCAGTGCCTCAAGCGCTGCAAGCAGGG...TTCATGGTTACACGTCTTCATGCCTGTCTTTCCCTTCACACATGTGTTCCCGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS TCA 90 bp | GATAGGTGTGAGCCGCAGCGATGGCCTTCGGGAGGTCATTGGCCTTaGAGTAGGCGAACTGCAGAAACTTGTAGGGCTCGCGCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: DRCEPQRWPSGGHWP*SRRTAETCRARAAE Trigger: TTCAGCAGCGCGAGCCCTACAAGTTTCTGCAGTTCGCCTACTTCAAGGCCAATGACCTCCCGAAGGCCATCGCTGCGGCTCACACCTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS-3UTR CAA 90 bp | GACGGGAACACATGTGTGAAGGGAAAGACAGGCATGAAGACGTGTAACCATGAAAAGTCCTTGAAGTCCTaGATCTCCCGCGACCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DGNTCVKGKTGMKTCNHEKSLKS*ISRDPS Trigger: CGAGGGGTCGCGGGAGATCAAGGACTTCAAGGACTT...TTCATGGTTACACGTCTTCATGCCTGTCTTTCCCTTCACACATGTGTTCCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS CCA 90 bp | GTACATGGTCGCCACAAATTTCTCCACGGGATAGCCTCCTATGACTaGGGTGAGGGTCTCCTCACAACGAATCTTACACTCCAGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHGRHKFLHGIASYD*GEGLLTTNLTLQNF Trigger: GAAGTTCTGGAGTGTAAGATTCGTTGTGAGGAGACCCTCACCCCAGTCATAGGAGGCTATCCCGTGGAGAAATTTGTGGCGACCATGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS TCA 90 bp | ACATACTCCACAACCTCTCCCTCATCGTCATCCATTAGGTGTTCCTaGGCGAAGTCGTACAGTTCCTTCTGGAGCGTCGTCACATTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TYSTTSPSSSSIRCS*AKSYSSFWSVVTLK Trigger: CTTTAATGTGACGACGCTCCAGAAGGAACTGTACGACTTCGCTCAGGAACACCTAATGGATGACGATGAGGGAGAGGTTGTGGAGTATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS CCA 90 bp | CAAGCTCTTATAATACTCCATGTTTCTCTTCATCATCTCGTCATCTaGATGCTTCAGGAGATAGGTGTGAGCCGCAGCGATGGCCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QALIILHVSLHHLVI*MLQEIGVSRSDGLR Trigger: CCGAAGGCCATCGCTGCGGCTCACACCTATCTCCTGAAGCATCCAGATGACGAGATGATGAAGAGAAACATGGAGTATTATAAGAGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS GCA 72 bp | CGGCTGGGCTGCGACTGGCGGAAGGCGGGCAGGCCCTaGTTGCAGCGCTTGAGGCACTGCGCGCGGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLGCDWRKAGRP*LQRLRHCARRS Trigger: GCTGCGCCGCGCGCAGTGCCTCAAGCGCTGCAAGCAGGGCCTGCCCGCCTTCCGCCAGTCGCAGCCCAGCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS CAA 72 bp | CTGGGCTGCGACTGGCGGAAGGCGGGCAGGCCCTGCTaGCAGCGCTTGAGGCACTGCGCGCGGCGCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: LGCDWRKAGRPC*QRLRHCARRST Trigger: CGTGCTGCGCCGCGCGCAGTGCCTCAAGCGCTGCAAGCAGGGCCTGCCCGCCTTCCGCCAGTCGCAGCCCAG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS CAA 90 bp | ACTGAGCGGCTGGGCTGCGACTGGCGGAAGGCGGGCAGGCCCTGCTaGCAGCGCTTGAGGCACTGCGCGCGGCGCAGCACGCTGCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TERLGCDWRKAGRPC*QRLRHCARRSTLPK Trigger: CTTCGGCAGCGTGCTGCGCCGCGCGCAGTGCCTCAAGCGCTGCAAGCAGGGCCTGCCCGCCTTCCGCCAGTCGCAGCCCAGCCGCTCAGT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS CCA 72 bp | GCTCGCGCTGCTGAAAGTCCGCCAGCACTGAGCGGCTaGGCTGCGACTGGCGGAAGGCGGGCAGGCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARAAESPPALSG*AATGGRRAGPA Trigger: AGCAGGGCCTGCCCGCCTTCCGCCAGTCGCAGCCCAGCCGCTCAGTGCTGGCGGACTTTCAGCAGCGCGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS TCA 72 bp | CTTGTAGGGCTCGCGCTGCTGAAAGTCCGCCAGCACTaGGCGGCTGGGCTGCGACTGGCGGAAGGCGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LVGLALLKVRQH*AAGLRLAEGGQ Trigger: CTGCCCGCCTTCCGCCAGTCGCAGCCCAGCCGCTCAGTGCTGGCGGACTTTCAGCAGCGCGAGCCCTACAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS TCA 72 bp | ACCCCTCGCAGGCAGCCAGGCACTCGTAGAAGGCCTTaGGGAAGTCGGGAAGCGCGAGCTCCATGTCGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TPRRQPGTRRRP*GSREARAPCRK Trigger: TTTCCGACATGGAGCTCGCGCTTCCCGACTTCCTCAAGGCCTTCTACGAGTGCCTGGCTGCCTGCGAGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS TCA 72 bp | GAGCCGCAGCGATGGCCTTCGGGAGGTCATTGGCCTTaGAGTAGGCGAACTGCAGAAACTTGTAGGGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: EPQRWPSGGHWP*SRRTAETCRAR Trigger: GCGAGCCCTACAAGTTTCTGCAGTTCGCCTACTTCAAGGCCAATGACCTCCCGAAGGCCATCGCTGCGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS CAA 72 bp | GCCCGCACCGCACGGACAAACAGGCTCTCGTACGACTaGGTTTCCAAGTCTTTAATGTGGTCCTCGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ARTARTNRLSYD*VSKSLMWSSAP Trigger: TGGAGCCGAGGACCACATTAAAGACTTGGAAACCAAGTCGTACGAGAGCCTGTTTGTCCGTGCGGTGCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS TCA 72 bp | ACAACCTCTCCCTCATCGTCATCCATTAGGTGTTCCTaGGCGAAGTCGTACAGTTCCTTCTGGAGCGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: TTSPSSSSIRCS*AKSYSSFWSVV Trigger: GACGACGCTCCAGAAGGAACTGTACGACTTCGCTCAGGAACACCTAATGGATGACGATGAGGGAGAGGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS CCA 72 bp | CGCCACAAATTTCTCCACGGGATAGCCTCCTATGACTaGGGTGAGGGTCTCCTCACAACGAATCTTACACTC | + |
|
Preference number: 6 (lower is better) Translates to: RHKFLHGIASYD*GEGLLTTNLTL Trigger: GAGTGTAAGATTCGTTGTGAGGAGACCCTCACCCCAGTCATAGGAGGCTATCCCGTGGAGAAATTTGTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||
| CDS TCA 72 bp | TACAGTTCCTTCTGGAGCGTCGTCACATTAAAGAACTaGACTGCTTCGGGTCTGGGCTGGAAGTGCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: YSSFWSVVTLKN*TASGLGWKCSS Trigger: GGATGAGCACTTCCAGCCCAGACCCGAAGCAGTTCAGTTCTTTAATGTGACGACGCTCCAGAAGGAACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084881.5 |
||